Index

A B C D E F G H I J K L M N O P R S T U V W
All Classes All Packages

A

add(double...) - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

add(double...) - Method in interface org.rcsb.cif.model.FloatColumnBuilder

Add new values to this column.

add(int...) - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

add(int...) - Method in interface org.rcsb.cif.model.IntColumnBuilder

Add new values to this column.

add(String...) - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

add(String...) - Method in interface org.rcsb.cif.model.StrColumnBuilder

Add new values to this column.

addBlock(Block) - Method in class org.rcsb.cif.model.builder.CifFileBuilderImpl

addBlock(Block) - Method in interface org.rcsb.cif.model.CifFileBuilder

Add a block to this builder.

addCategory(Category) - Method in interface org.rcsb.cif.model.BlockBuilder

Add a category to this builder.

addCategory(Category) - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

addColumn(Column<?>) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

addColumn(Column<?>) - Method in interface org.rcsb.cif.model.CategoryBuilder

Add a column to this builder.

as(SchemaProvider<F, B>) - Method in interface org.rcsb.cif.model.CifFile

Convenience method to access this file wrapped by a given schema.

as(SchemaProvider<F, B>) - Method in interface org.rcsb.cif.model.CifFileBuilder

Specify a schema for this build operation.

asButWithoutValidation(SchemaProvider<F, B>) - Method in interface org.rcsb.cif.model.CifFile

Convenience method to access this file wrapped by a given schema.

Atom - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe atomic information used in crystallographic structure studies.

Atom(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Atom

AtomBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomBuilder

AtomSite - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe atom site information used in crystallographic structure studies.

AtomSite - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITE category record details about the atom sites in a macromolecular crystal structure, such as the positional coordinates, atomic displacement parameters, magnetic moments and directions.

AtomSite(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSite

AtomSite(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSite

AtomSiteAniso - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the anisotropic thermal parameters of the atomic sites in a crystal structure.

AtomSiteAniso(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSiteAniso

AtomSiteAnisoBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

AtomSiteAnisotrop - Class in org.rcsb.cif.schema.core

AtomSiteAnisotrop - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITE_ANISOTROP category record details about anisotropic displacement parameters.

AtomSiteAnisotrop(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

AtomSiteAnisotrop(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSiteAnisotrop

AtomSiteAnisotropBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

AtomSiteAnisotropBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

AtomSiteBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

AtomSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

AtomSites - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe information which applies to all atom sites in a crystal structure.

AtomSites - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITES category record details about the crystallographic cell and cell transformations, which are common to all atom sites.

AtomSites(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSites

AtomSites(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSites

AtomSitesAlt - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITES_ALT category record details about the structural ensembles that should be generated from atom sites or groups of atom sites that are modelled in alternative conformations in this data block.

AtomSitesAlt(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSitesAlt

AtomSitesAltBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltBuilder

AtomSitesAltEns - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITES_ALT_ENS category record details about the ensemble structure generated from atoms with various alternative conformation IDs.

AtomSitesAltEns(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSitesAltEns

AtomSitesAltEnsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltEnsBuilder

AtomSitesAltGen - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITES_ALT_GEN category record details about the interpretation of multiple conformations in the structure.

AtomSitesAltGen(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSitesAltGen

AtomSitesAltGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltGenBuilder

AtomSitesBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

AtomSitesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

AtomSitesCartnTransform - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the matrix elements used to transform Cartesion coordinates into fractional coordinates of all atom sites in a crystal structure.

AtomSitesCartnTransform(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSitesCartnTransform

AtomSitesCartnTransformBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

AtomSitesFootnote - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_SITES_FOOTNOTE category record detailed comments about an atom site or a group of atom sites.

AtomSitesFootnote(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomSitesFootnote

AtomSitesFootnoteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesFootnoteBuilder

AtomSitesFractTransform - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the matrix elements used to transform Cartesion coordinates into fractional coordinates of all atom sites in a crystal structure.

AtomSitesFractTransform(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomSitesFractTransform

AtomSitesFractTransformBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

AtomType - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe atomic type information used in crystallographic structure studies.

AtomType - Class in org.rcsb.cif.schema.mm

Data items in the ATOM_TYPE category record details about the properties of the atoms that occupy the atom sites, such as the atomic scattering factors.

AtomType(Category) - Constructor for class org.rcsb.cif.schema.mm.AtomType

AtomType(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomType

AtomTypeBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

AtomTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

AtomTypeScat - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe atomic scattering information used in crystallographic structure studies.

AtomTypeScat(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AtomTypeScat

AtomTypeScatBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

Audit - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to record details about the creation and subsequent updating of the data block.

Audit - Class in org.rcsb.cif.schema.mm

Data items in the AUDIT category record details about the creation and subsequent updating of the data block.

Audit(Category) - Constructor for class org.rcsb.cif.schema.mm.Audit

Audit(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Audit

AuditAuthor - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used for author(s) details.

AuditAuthor - Class in org.rcsb.cif.schema.mm

Data items in the AUDIT_AUTHOR category record details about the author(s) of the data block.

AuditAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.AuditAuthor

AuditAuthor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AuditAuthor

AuditAuthorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditAuthorBuilder

AuditAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditAuthorBuilder

AuditBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

AuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditBuilder

AuditConform - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used describe dictionary versions by which data names in the current data block are conformant.

AuditConform - Class in org.rcsb.cif.schema.mm

Data items in the AUDIT_CONFORM category describe the dictionary versions against which the data names appearing in the current data block are conformant.

AuditConform(Category) - Constructor for class org.rcsb.cif.schema.mm.AuditConform

AuditConform(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AuditConform

AuditConformBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditConformBuilder

AuditConformBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditConformBuilder

AuditContactAuthor - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used for contact author(s) details.

AuditContactAuthor - Class in org.rcsb.cif.schema.mm

Data items in the AUDIT_CONTACT_AUTHOR category record details about the name and address of the author to be contacted concerning the content of this data block.

AuditContactAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.AuditContactAuthor

AuditContactAuthor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AuditContactAuthor

AuditContactAuthorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

AuditContactAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

AuditLink - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to record details about the relationships between data blocks in the current CIF.

AuditLink - Class in org.rcsb.cif.schema.mm

Data items in the AUDIT_LINK category record details about the relationships between data blocks in the current CIF.

AuditLink(Category) - Constructor for class org.rcsb.cif.schema.mm.AuditLink

AuditLink(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.AuditLink

AuditLinkBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditLinkBuilder

AuditLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditLinkBuilder

B

BCIF_GZIPPED - org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

.bcif.gz

BCIF_PLAIN - org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

.bcif

BinaryBlock - Class in org.rcsb.cif.model.binary

BinaryBlock(Map<String, Category>, String) - Constructor for class org.rcsb.cif.model.binary.BinaryBlock

BinaryBlock(Map<String, Category>, String, List<Block>) - Constructor for class org.rcsb.cif.model.binary.BinaryBlock

BinaryCategory - Class in org.rcsb.cif.model.binary

BinaryCategory(String, int, Object[]) - Constructor for class org.rcsb.cif.model.binary.BinaryCategory

BinaryCifCodec - Class in org.rcsb.cif.binary.codec

A library of codec implementations and provider to codec-specific constants such as encoder name, version, and minimal version of the data to decode.

BinaryCifCodec() - Constructor for class org.rcsb.cif.binary.codec.BinaryCifCodec

BinaryCifReader - Class in org.rcsb.cif.binary

BinaryCifReader(CifOptions) - Constructor for class org.rcsb.cif.binary.BinaryCifReader

BinaryCifWriter - Class in org.rcsb.cif.binary

BinaryCifWriter(CifOptions) - Constructor for class org.rcsb.cif.binary.BinaryCifWriter

BinaryColumn<T> - Class in org.rcsb.cif.model.binary

BinaryColumn(String, int, int[]) - Constructor for class org.rcsb.cif.model.binary.BinaryColumn

BinaryFile - Class in org.rcsb.cif.model.binary

BinaryFile(List<Block>, String, String) - Constructor for class org.rcsb.cif.model.binary.BinaryFile

BinaryFloatColumn - Class in org.rcsb.cif.model.binary

BinaryFloatColumn(String, int, double[], int[]) - Constructor for class org.rcsb.cif.model.binary.BinaryFloatColumn

BinaryIntColumn - Class in org.rcsb.cif.model.binary

BinaryIntColumn(String, int, int[], int[]) - Constructor for class org.rcsb.cif.model.binary.BinaryIntColumn

BinaryStrColumn - Class in org.rcsb.cif.model.binary

BinaryStrColumn(String, int, String[], int[]) - Constructor for class org.rcsb.cif.model.binary.BinaryStrColumn

Block - Interface in org.rcsb.cif.model

Represents a Block in a CifFile.

BlockBuilder<P extends CifFileBuilder> - Interface in org.rcsb.cif.model

The specification of a builder for generic Block instances.

BlockBuilderImpl<P extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

BlockBuilderImpl(String, P) - Constructor for class org.rcsb.cif.model.builder.BlockBuilderImpl

blocks() - Method in interface org.rcsb.cif.model.CifFile

Convenience method to access all blocks as Stream.

build() - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Exit this builder and retrieve the actual, immutable CifOptions instance.

build() - Method in interface org.rcsb.cif.model.BlockBuilder

Build this block as a detached instance.

build() - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

build() - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

build() - Method in class org.rcsb.cif.model.builder.CifFileBuilderImpl

build() - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

build() - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

build() - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

build() - Method in interface org.rcsb.cif.model.CategoryBuilder

Build this category as a detached instance.

build() - Method in interface org.rcsb.cif.model.CifFileBuilder

Build the file described by this builder.

build() - Method in interface org.rcsb.cif.model.ColumnBuilder

Retrieve (detached) column describe by this builder.

build() - Method in interface org.rcsb.cif.model.FloatColumnBuilder

build() - Method in interface org.rcsb.cif.model.IntColumnBuilder

build() - Method in interface org.rcsb.cif.model.StrColumnBuilder

build() - Method in class org.rcsb.cif.schema.core.CifCoreFileBuilder

build() - Method in class org.rcsb.cif.schema.mm.MmCifFileBuilder

builder() - Static method in class org.rcsb.cif.CifOptions

Acquire the actual builder instance.

ByteArray - Class in org.rcsb.cif.binary.data

The abstraction of binary data.

ByteArray(byte[]) - Constructor for class org.rcsb.cif.binary.data.ByteArray

ByteArray(byte[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.ByteArray

ByteArrayEncoding<T extends NumberArray<?>> - Class in org.rcsb.cif.binary.encoding

Encodes an array of numbers of specified types as raw bytes.

C

categories - Variable in class org.rcsb.cif.model.builder.BlockBuilderImpl

categories() - Method in interface org.rcsb.cif.model.Block

Traverses all present categories.

Category - Interface in org.rcsb.cif.model

The base of all Category implementations.

Category.EmptyCategory - Class in org.rcsb.cif.model

This dummy instance is created and returned if an absent Category is requested for a Block.

categoryBlacklist(String...) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the category blacklist.

categoryBlacklist(List<String>) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the category blacklist.

CategoryBuilder<P extends BlockBuilder<PP>,PP extends CifFileBuilder> - Interface in org.rcsb.cif.model

The specification of a builder for generic Category instances.

CategoryBuilderImpl<P extends BlockBuilder<PP>,PP extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

CategoryBuilderImpl(String, P) - Constructor for class org.rcsb.cif.model.builder.CategoryBuilderImpl

categoryWhitelist(String...) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the category whitelist.

categoryWhitelist(List<String>) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the category whitelist.

Cell - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the parameters of the crystal unit cell and their measurement.

Cell - Class in org.rcsb.cif.schema.mm

Data items in the CELL category record details about the crystallographic cell parameters.

Cell(Category) - Constructor for class org.rcsb.cif.schema.mm.Cell

Cell(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Cell

CellAngle - Class in org.rcsb.cif.schema.core

CellAngle(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CellAngle

CellAngleBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellAngleBuilder

CellBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

CellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

CellMeasurement - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the angles between the axes in the crystal unit cell.

CellMeasurement - Class in org.rcsb.cif.schema.mm

Data items in the CELL_MEASUREMENT category record details about the measurement of the crystallographic cell parameters.

CellMeasurement(Category) - Constructor for class org.rcsb.cif.schema.mm.CellMeasurement

CellMeasurement(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CellMeasurement

CellMeasurementBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

CellMeasurementBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

CellMeasurementRefln - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the reflection data used in the measurement of the crystal unit cell.

CellMeasurementRefln - Class in org.rcsb.cif.schema.mm

Data items in the CELL_MEASUREMENT_REFLN category record details about the reflections used to determine the crystallographic cell parameters.

CellMeasurementRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.CellMeasurementRefln

CellMeasurementRefln(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CellMeasurementRefln

CellMeasurementReflnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

CellMeasurementReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementReflnBuilder

ChemComp - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP category give details about each of the chemical components from which the relevant chemical structures can be constructed, such as name, mass or charge.

ChemComp(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemComp

ChemCompAngle - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_ANGLE category record details about angles in a chemical component.

ChemCompAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompAngle

ChemCompAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

ChemCompAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_ATOM category record details about the atoms in a chemical component.

ChemCompAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompAtom

ChemCompAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

ChemCompBond - Class in org.rcsb.cif.schema.core

ChemCompBond - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_BOND category record details about the bonds between atoms in a chemical component.

ChemCompBond(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompBond

ChemCompBond(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ChemCompBond

ChemCompBondBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemCompBondBuilder

ChemCompBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

ChemCompBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

ChemCompChir - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_CHIR category provide details about the chiral centres in a chemical component.

ChemCompChir(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompChir

ChemCompChirAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_CHIR_ATOM category enumerate the atoms bonded to a chiral atom within a chemical component.

ChemCompChirAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompChirAtom

ChemCompChirAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirAtomBuilder

ChemCompChirBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

ChemCompLink - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_LINK category give details about the links between chemical components.

ChemCompLink(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompLink

ChemCompLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompLinkBuilder

ChemCompPlane - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_PLANE category provide identifiers for the planes in a chemical component.

ChemCompPlane(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompPlane

ChemCompPlaneAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_PLANE_ATOM category enumerate the atoms in a plane within a chemical component.

ChemCompPlaneAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

ChemCompPlaneAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneAtomBuilder

ChemCompPlaneBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneBuilder

ChemCompTor - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_TOR category record details about the torsion angles in a chemical component.

ChemCompTor(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompTor

ChemCompTorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

ChemCompTorValue - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_TOR_VALUE category record details about the target values for the torsion angles enumerated in the CHEM_COMP_TOR list.

ChemCompTorValue(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemCompTorValue

ChemCompTorValueBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

Chemical - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which describe the composition and chemical properties of the compound under study.

Chemical - Class in org.rcsb.cif.schema.mm

Data items in the CHEMICAL category would not in general be used in a macromolecular CIF.

Chemical(Category) - Constructor for class org.rcsb.cif.schema.mm.Chemical

Chemical(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Chemical

ChemicalBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

ChemicalBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

ChemicalConnAtom - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which describe the 2D chemical structure of the molecular species.

ChemicalConnAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEMICAL_CONN_ATOM category would not, in general, be used in a macromolecular CIF.

ChemicalConnAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemicalConnAtom

ChemicalConnAtom(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ChemicalConnAtom

ChemicalConnAtomBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

ChemicalConnAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

ChemicalConnBond - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the connections between the atoms sites in the chemical_conn_atom list and the nature of the chemical bond between these atoms.

ChemicalConnBond - Class in org.rcsb.cif.schema.mm

Data items in the CHEMICAL_CONN_BOND category would not, in general, be used in a macromolecular CIF.

ChemicalConnBond(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemicalConnBond

ChemicalConnBond(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ChemicalConnBond

ChemicalConnBondBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

ChemicalConnBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnBondBuilder

ChemicalFormula - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the composition and chemical properties of the compound.

ChemicalFormula - Class in org.rcsb.cif.schema.mm

Data items in the CHEMICAL_FORMULA category would not, in general, be used in a macromolecular CIF.

ChemicalFormula(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemicalFormula

ChemicalFormula(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ChemicalFormula

ChemicalFormulaBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

ChemicalFormulaBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

ChemLink - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK category give details about the links between chemical components.

ChemLink(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLink

ChemLinkAngle - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_ANGLE category record details about angles in a link between chemical components.

ChemLinkAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkAngle

ChemLinkAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

ChemLinkBond - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_BOND category record details about bonds in a link between components in the chemical structure.

ChemLinkBond(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkBond

ChemLinkBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

ChemLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBuilder

ChemLinkChir - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_CHIR category provide details about the chiral centres in a link between two chemical components.

ChemLinkChir(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkChir

ChemLinkChirAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_CHIR_ATOM category enumerate the atoms bonded to a chiral atom in a link between two chemical components.

ChemLinkChirAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkChirAtom

ChemLinkChirAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirAtomBuilder

ChemLinkChirBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

ChemLinkPlane - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_PLANE category provide identifiers for the planes in a link between two chemical components.

ChemLinkPlane(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkPlane

ChemLinkPlaneAtom - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_PLANE_ATOM category enumerate the atoms in a plane in a link between two chemical components.

ChemLinkPlaneAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkPlaneAtom

ChemLinkPlaneAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder

ChemLinkPlaneBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneBuilder

ChemLinkTor - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_TOR category record details about the torsion angles in a link between two chemical components.

ChemLinkTor(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkTor

ChemLinkTorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

ChemLinkTorValue - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_LINK_TOR_VALUE category record details about the target values for the torsion angles enumerated in the CHEM_LINK_TOR list.

ChemLinkTorValue(Category) - Constructor for class org.rcsb.cif.schema.mm.ChemLinkTorValue

ChemLinkTorValueBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

CIF_CORE - Static variable in class org.rcsb.cif.schema.StandardSchemata

CIF_GZIPPED - org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

.cif.gz

CIF_PLAIN - org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

.cif

CifBuilder - Class in org.rcsb.cif

The entry point to create CifFile instances programmatically.

CifBuilder() - Constructor for class org.rcsb.cif.CifBuilder

CifCore - Class in org.rcsb.cif.schema.core

The CIF_CORE group contains the definitions of data items that are common to all domains of crystallographic studies.

CifCore(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CifCore

CifCoreBlock - Class in org.rcsb.cif.schema.core

CifCoreBlock(Block) - Constructor for class org.rcsb.cif.schema.core.CifCoreBlock

CifCoreBlockBuilder - Class in org.rcsb.cif.schema.core

CifCoreBlockBuilder(String, CifCoreFileBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreBlockBuilder

CifCoreBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CifCoreBuilder

CifCoreCategoryBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder(String, CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder

CifCoreCategoryBuilder.AtomBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSiteAnisoBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSiteAnisotropBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSiteBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSitesBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomSitesFractTransformBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomTypeBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AtomTypeScatBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AuditAuthorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AuditBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AuditConformBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AuditContactAuthorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.AuditLinkBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CellAngleBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CellBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CellMeasurementBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CellMeasurementReflnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ChemCompBondBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ChemicalBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ChemicalConnAtomBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ChemicalConnBondBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ChemicalFormulaBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CifCoreBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CitationAuthorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CitationBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.CitationEditorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ComputingBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DatabaseBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DatabaseCodeBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DatabaseRelatedBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffractionBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnAttenuatorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnDetectorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnMeasurementBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnOrientBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnOrientReflnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnRadiationBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnReflnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnReflnsBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnReflnsClassBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnScaleGroupBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnSourceBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnStandardBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnStandardReflnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DiffrnStandardsBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DisplayBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.DisplayColourBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ExptlAbsorptBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ExptlBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ExptlCrystalAppearanceBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ExptlCrystalBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ExptlCrystalFaceBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.FunctionBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomAngleBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomBondBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomContactBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomHbondBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.GeomTorsionBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.JournalBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.JournalCoeditorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.JournalDateBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.JournalIndexBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.JournalTecheditorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ModelBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ModelSiteBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublAuthorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublBodyBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublContactAuthorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublicationBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublManuscriptBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublManuscriptInclBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublManuscriptInclExtraBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublRequestedBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.PublSectionBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.RefineBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.RefineDiffBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.RefineLsBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.RefineLsClassBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ReflnBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ReflnsBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ReflnsClassBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ReflnsScaleBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ReflnsShellBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SpaceGroupBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SpaceGroupGeneratorBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SpaceGroupSymopBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.StructureBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SymmetryBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.SymmetryEquivBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ValenceBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ValenceParamBuilder - Class in org.rcsb.cif.schema.core

CifCoreCategoryBuilder.ValenceRefBuilder - Class in org.rcsb.cif.schema.core

CifCoreFile - Class in org.rcsb.cif.schema.core

CifCoreFile(CifFile) - Constructor for class org.rcsb.cif.schema.core.CifCoreFile

CifCoreFileBuilder - Class in org.rcsb.cif.schema.core

CifCoreFileBuilder() - Constructor for class org.rcsb.cif.schema.core.CifCoreFileBuilder

CifCoreSchemaProvider - Class in org.rcsb.cif.schema

Provides schema support for cif-core files.

CifCoreSchemaProvider() - Constructor for class org.rcsb.cif.schema.CifCoreSchemaProvider

CifFile - Interface in org.rcsb.cif.model

The instance of a parsed CifFile.

CifFileBuilder - Interface in org.rcsb.cif.model

The specification of a builder for generic CifFile instances.

CifFileBuilderImpl - Class in org.rcsb.cif.model.builder

CifFileBuilderImpl() - Constructor for class org.rcsb.cif.model.builder.CifFileBuilderImpl

CifIO - Class in org.rcsb.cif

Collection of IO operations to retrieve, process, and write CIF files.

CifIO() - Constructor for class org.rcsb.cif.CifIO

CifOptions - Class in org.rcsb.cif

Allows to set options for CIF writing.

CifOptions.CifOptionsBuilder - Class in org.rcsb.cif

Internal class to handle the option building process.

CifOptions.CifOptionsBuilder.FileFormat - Enum in org.rcsb.cif

Supported file formats.

CifOptionsBuilder() - Constructor for class org.rcsb.cif.CifOptions.CifOptionsBuilder

Citation - Class in org.rcsb.cif.schema.core

Data items in the CITATION category record details about the literature cited as being relevant to the contents of the data block.

Citation - Class in org.rcsb.cif.schema.mm

Data items in the CITATION category record details about the literature cited as being relevant to the contents of the data block.

Citation(Category) - Constructor for class org.rcsb.cif.schema.mm.Citation

Citation(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Citation

CitationAuthor - Class in org.rcsb.cif.schema.core

Category of items describing citation author(s) details.

CitationAuthor - Class in org.rcsb.cif.schema.mm

Data items in the CITATION_AUTHOR category record details about the authors associated with the citations in the CITATION list.

CitationAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.CitationAuthor

CitationAuthor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CitationAuthor

CitationAuthorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationAuthorBuilder

CitationAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationAuthorBuilder

CitationBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

CitationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

CitationEditor - Class in org.rcsb.cif.schema.core

Category of items describing citation editor(s) details.

CitationEditor - Class in org.rcsb.cif.schema.mm

Data items in the CITATION_EDITOR category record details about the editors associated with the books or book chapters cited in the CITATION list.

CitationEditor(Category) - Constructor for class org.rcsb.cif.schema.mm.CitationEditor

CitationEditor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.CitationEditor

CitationEditorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationEditorBuilder

CitationEditorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationEditorBuilder

Classifier - Class in org.rcsb.cif.binary

Classifies Int32Array and Float64Array instances, i.e.

Classifier() - Constructor for class org.rcsb.cif.binary.Classifier

classify(Float64Array) - Static method in class org.rcsb.cif.binary.Classifier

Auto-encodes this FloatArray by the encoding strategy with the minimal size.

classify(Int32Array) - Static method in class org.rcsb.cif.binary.Classifier

Auto-encodes this Int32Array by the encoding strategy with the minimal size.

classifyPrecision(Float64Array) - Static method in class org.rcsb.cif.binary.Classifier

Determines the precision needed to encode this column in a lossless fashion.

clear() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

CODEC_NAME - Static variable in class org.rcsb.cif.binary.codec.BinaryCifCodec

Column<T> - Interface in org.rcsb.cif.model

Represents a column of information in a CifFile, e.g.

Column.EmptyColumn - Class in org.rcsb.cif.model

This dummy instance is created and returned if an absent Column is requested for a Category.

columnBlacklist(String...) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the column blacklist.

columnBlacklist(List<String>) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the column blacklist.

ColumnBuilder<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Interface in org.rcsb.cif.model

Defines functionality of column building classes.

ColumnBuilderImpl<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

columns() - Method in interface org.rcsb.cif.model.Category

Traverse all present columns.

columnWhitelist(String...) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the column whitelist.

columnWhitelist(List<String>) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Add entries to the column whitelist.

computeIfAbsent(String, Function<? super String, ? extends V>) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Computing - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to record details of the computer programs used in the crystal structure analysis.

Computing - Class in org.rcsb.cif.schema.mm

Data items in the COMPUTING category record details about the computer programs used in the crystal structure analysis.

Computing(Category) - Constructor for class org.rcsb.cif.schema.mm.Computing

Computing(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Computing

ComputingBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

ComputingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

containsKey(Object) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

containsValue(Object) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

create(int, int) - Static method in interface org.rcsb.cif.binary.data.IntArray

createColumnText(String, List<?>, List<ValueKind>, Class<C>) - Static method in interface org.rcsb.cif.model.CategoryBuilder

Convenience function to create Column instances from raw data.

createDelegate(String, Category) - Method in class org.rcsb.cif.schema.core.CifCoreBlock

createDelegate(String, Category) - Method in class org.rcsb.cif.schema.DelegatingBlock

createDelegate(String, Category) - Method in class org.rcsb.cif.schema.mm.MmCifBlock

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSites

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSitesAlt

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSitesAltEns

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSitesAltGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomSitesFootnote

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AtomType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Audit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AuditAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AuditConform

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.AuditLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Cell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.CellMeasurement

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.CellMeasurementRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemComp

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompChir

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompChirAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompPlane

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompTor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Chemical

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemicalConnBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkChirAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkPlane

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkPlaneAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Citation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.CitationAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.CitationEditor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Computing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Database

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Database2

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBCaveat

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBRemark

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBRevRecord

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Diffrn

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnAttenuator

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnRadiationWavelength

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnScaleGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnSource

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em3dFitting

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmAdmin

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmAuthorList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmBuffer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDbReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDbReferenceAuxiliary

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDepui

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDetector

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDiffraction

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEmbedding

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmExperiment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmFiducialMarkers

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmFscCurve

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmHighPressureFreezing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmImageProcessing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmImageRecording

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmImageScans

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmImaging

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmInterpretFigure

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmLayerLines

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmMap

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmObsolete

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmShadowing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSoftware

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSpecimen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmStaining

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmStartModel

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmStructureFactors

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSupersede

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmTomography

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmVirusShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmVitrification

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Entity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityKeywords

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityNameCom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityNameSys

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityPoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntityPolySeq

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Entry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.EntryLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Exptl

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Geom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.GeomAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.GeomBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.GeomContact

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.GeomHbond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.GeomTorsion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDatasetExternalReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroupLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDatasetList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmFeatureList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectAxis

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectHalfTorus

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectPlane

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmLigandProbe

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelGroupLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocol

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentative

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModelGroupLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmProbeList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmPseudoSiteFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmRelatedDatasets

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStartingComputationalModels

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStructAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClassLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Journal

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.JournalIndex

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.NdbOriginalNdbCoordinates

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.NdbStructConfNa

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.NdbStructFeatureNa

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAtlas

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAudit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditConformExtension

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxBuffer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompImport

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModel

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelDescriptor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompNonstandard

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompRelated

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConnect

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConnectModification

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConnectType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxCoord

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxCoordinateModel

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePdbOmit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRemark

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingStatus

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDbref

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccMapman

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityFeatures

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDomain

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranch

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncEnzyme

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncOther

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncRegulatory

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncStructural

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityName

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomy

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomyTree

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityNonpoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaNonstandard

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyProteinClass

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxExptlPd

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFamilyGroupIndex

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxHybrid

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxInhibitorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxIonInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityInstanceList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMolecule

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrRefine

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrRepresentative

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftwareTask

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakSoftware

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPdbCompnd

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPdbSource

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxPrereleaseSeq

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxProteinInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySubcomponents

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefine

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxReRefinement

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxRobotSystem

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSequenceAnnotation

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSequencePattern

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDelivery

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSGProject

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSolventInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSource

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthClassification

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructAsymGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructBiolFunc

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructEntityInst

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructMsymGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSummaryFlags

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxTrnaInfo

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxUnpair

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValContact

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxVersion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxViewCategory

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxViewCategoryGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PdbxXplorFile

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Phasing

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingAveraging

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingIsomorphous

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMAD

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMADClust

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIR

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingSet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Publ

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PublAuthor

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PublBody

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.PublManuscriptIncl

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Refine

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineBIso

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineHist

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineLsClass

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineLsRestrType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineLsShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Refln

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Reflns

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ReflnsClass

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ReflnsScale

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ReflnsShell

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Software

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.SpaceGroup

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.SpaceGroupSymop

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Struct

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructAsym

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructBiol

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructBiolGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructBiolKeywords

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructBiolView

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructConf

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructConfType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructConn

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructConnType

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructKeywords

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructMonDetails

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructMonNucl

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructMonProt

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructNcsDom

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructNcsEns

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructNcsEnsGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructNcsOper

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructRef

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructRefSeq

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSheet

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSheetRange

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSite

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSiteGen

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSiteKeywords

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.StructSiteView

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.Symmetry

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.SymmetryEquiv

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ValenceParam

createDelegate(String, Column) - Method in class org.rcsb.cif.schema.mm.ValenceRef

createDelegate(String, Column<?>) - Method in class org.rcsb.cif.schema.DelegatingCategory

createTypedBuilder() - Method in class org.rcsb.cif.schema.CifCoreSchemaProvider

createTypedBuilder() - Method in class org.rcsb.cif.schema.MmCifSchemaProvider

createTypedBuilder() - Method in interface org.rcsb.cif.schema.SchemaProvider

Create an instance of a schema-supporting builder.

createTypedFile(CifFile) - Method in class org.rcsb.cif.schema.CifCoreSchemaProvider

createTypedFile(CifFile) - Method in class org.rcsb.cif.schema.MmCifSchemaProvider

createTypedFile(CifFile) - Method in interface org.rcsb.cif.schema.SchemaProvider

Wrap a CifFile in a schema-supporting implementation of the data model.

D

Database - Class in org.rcsb.cif.schema.core

The CATEGORY of data items recording database deposition.

Database - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE category have been superseded by data items in the DATABASE_2 category.

Database(Category) - Constructor for class org.rcsb.cif.schema.mm.Database

Database(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Database

Database2 - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE_2 category record details about the database identifiers of the data block.

Database2(Category) - Constructor for class org.rcsb.cif.schema.mm.Database2

Database2Builder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Database2Builder

DatabaseBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

DatabaseBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

DatabaseCode - Class in org.rcsb.cif.schema.core

The CATEGORY of data items recording database deposition.

DatabaseCode(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DatabaseCode

DatabaseCodeBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

DatabasePDBCaveat - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE_PDB_CAVEAT category record details about features of the data block flagged as 'caveats' by the Protein Data Bank (PDB).

DatabasePDBCaveat(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBCaveat

DatabasePDBCaveatBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBCaveatBuilder

DatabasePDBMatrix - Class in org.rcsb.cif.schema.mm

The DATABASE_PDB_MATRIX category provides placeholders for transformation matrices and vectors used by the Protein Data Bank (PDB).

DatabasePDBMatrix(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBMatrix

DatabasePDBMatrixBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

DatabasePDBRemark - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE_PDB_REMARK category record details about the data block as archived by the Protein Data Bank (PDB).

DatabasePDBRemark(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBRemark

DatabasePDBRemarkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRemarkBuilder

DatabasePDBRev - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE_PDB_REV category record details about the history of the data block as archived by the Protein Data Bank (PDB).

DatabasePDBRev(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBRev

DatabasePDBRevBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

DatabasePDBRevRecord - Class in org.rcsb.cif.schema.mm

Data items in the DATABASE_PDB_REV_RECORD category record details about specific record types that were changed in a given revision of a PDB entry.

DatabasePDBRevRecord(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBRevRecord

DatabasePDBRevRecordBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevRecordBuilder

DatabasePDBTvect - Class in org.rcsb.cif.schema.mm

The DATABASE_PDB_TVECT category provides placeholders for the TVECT matrices and vectors used by the Protein Data Bank (PDB).

DatabasePDBTvect(Category) - Constructor for class org.rcsb.cif.schema.mm.DatabasePDBTvect

DatabasePDBTvectBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

DatabaseRelated - Class in org.rcsb.cif.schema.core

A category of items recording entries in databases that describe the same or related data.

DatabaseRelated(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DatabaseRelated

DatabaseRelatedBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

decode() - Method in interface org.rcsb.cif.binary.data.EncodedData

decode(InputStream) - Static method in class org.rcsb.cif.binary.codec.MessagePackCodec

decode(Map<String, Object>) - Static method in class org.rcsb.cif.binary.codec.BinaryCifCodec

Decode an instance of EncodedData by traversing its encoding chain until the original data is restored.

decode(L) - Method in interface org.rcsb.cif.binary.encoding.Encoding

Move one step up the encoding deque.

decode(ByteArray) - Method in class org.rcsb.cif.binary.encoding.StringArrayEncoding

decode(EncodedData<?>) - Static method in class org.rcsb.cif.binary.codec.BinaryCifCodec

Request decoding of this EncodedData instance.

decode(Int32Array) - Method in class org.rcsb.cif.binary.encoding.FixedPointEncoding

decode(Int32Array) - Method in class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

decode(Int32Array) - Method in class org.rcsb.cif.binary.encoding.RunLengthEncoding

decode(IntArray) - Method in class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

decode(ByteArrayEncoding<T>) - Method in class org.rcsb.cif.binary.data.ByteArray

decode(DeltaEncoding<Int16Array>) - Method in class org.rcsb.cif.binary.data.Int16Array

decode(DeltaEncoding<Int32Array>) - Method in class org.rcsb.cif.binary.data.Int32Array

decode(DeltaEncoding<Int8Array>) - Method in class org.rcsb.cif.binary.data.Int8Array

decode(DeltaEncoding<T>) - Method in interface org.rcsb.cif.binary.data.SignedIntArray

decode(FixedPointEncoding) - Method in class org.rcsb.cif.binary.data.Int32Array

decode(IntegerPackingEncoding) - Method in interface org.rcsb.cif.binary.data.IntArray

decode(RunLengthEncoding) - Method in class org.rcsb.cif.binary.data.Int32Array

decode(StringArrayEncoding) - Method in class org.rcsb.cif.binary.data.ByteArray

decode(T) - Method in class org.rcsb.cif.binary.encoding.DeltaEncoding

delegate - Variable in class org.rcsb.cif.schema.DelegatingBlock

delegate - Variable in class org.rcsb.cif.schema.DelegatingCategory

delegate - Variable in class org.rcsb.cif.schema.DelegatingCifFile

delegate - Variable in class org.rcsb.cif.schema.DelegatingColumn

DelegatingBlock - Class in org.rcsb.cif.schema

DelegatingBlock(Block) - Constructor for class org.rcsb.cif.schema.DelegatingBlock

DelegatingCategory - Class in org.rcsb.cif.schema

DelegatingCategory(Category) - Constructor for class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory - Class in org.rcsb.cif.schema

DelegatingCifCoreCategory(String, CifCoreBlock) - Constructor for class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

DelegatingCifFile<B extends DelegatingBlock> - Class in org.rcsb.cif.schema

The schema is implemented by wrapping a CifFile and all block, category, and column data therein in dedicated classes that provide the schema (category names, column names, and column types) defined by some dictionary.

DelegatingCifFile(CifFile) - Constructor for class org.rcsb.cif.schema.DelegatingCifFile

DelegatingColumn<T> - Class in org.rcsb.cif.schema

DelegatingColumn(Column<?>) - Constructor for class org.rcsb.cif.schema.DelegatingColumn

DelegatingColumn(Column<?>, Class<T>) - Constructor for class org.rcsb.cif.schema.DelegatingColumn

DelegatingFloatColumn - Class in org.rcsb.cif.schema

DelegatingFloatColumn(Column<?>) - Constructor for class org.rcsb.cif.schema.DelegatingFloatColumn

DelegatingIntColumn - Class in org.rcsb.cif.schema

DelegatingIntColumn(Column<?>) - Constructor for class org.rcsb.cif.schema.DelegatingIntColumn

DelegatingStrColumn - Class in org.rcsb.cif.schema

DelegatingStrColumn(Column<?>) - Constructor for class org.rcsb.cif.schema.DelegatingStrColumn

DeltaEncoding<T extends SignedIntArray<?>> - Class in org.rcsb.cif.binary.encoding

Stores the input integer array as an array of consecutive differences.

DeltaEncoding() - Constructor for class org.rcsb.cif.binary.encoding.DeltaEncoding

DeltaEncoding(int, int) - Constructor for class org.rcsb.cif.binary.encoding.DeltaEncoding

Demo - Class in org.rcsb.cif

Demo() - Constructor for class org.rcsb.cif.Demo

Diffraction - Class in org.rcsb.cif.schema.core

The DICTIONARY group encompassing the CORE DIFFRACTION data items defined and used with in the Crystallographic Information Framework (CIF).

Diffraction(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Diffraction

DiffractionBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffractionBuilder

Diffrn - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the diffraction experiment.

Diffrn - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN category record details about the diffraction data and their measurement.

Diffrn(Category) - Constructor for class org.rcsb.cif.schema.mm.Diffrn

Diffrn(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Diffrn

DiffrnAttenuator - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the attenuators used in the diffraction source.

DiffrnAttenuator - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_ATTENUATOR category record details about the diffraction attenuator scales employed.

DiffrnAttenuator(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnAttenuator

DiffrnAttenuator(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnAttenuator

DiffrnAttenuatorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnAttenuatorBuilder

DiffrnAttenuatorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnAttenuatorBuilder

DiffrnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

DiffrnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

DiffrnDetector - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the detectors used in the in the measurement of diffraction intensities.

DiffrnDetector - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_DETECTOR category describe the detector used to measure the scattered radiation, including any analyser and post-sample collimation.

DiffrnDetector(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnDetector

DiffrnDetector(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnDetector

DiffrnDetectorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

DiffrnDetectorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

DiffrnMeasurement - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the details of the diffraction measurement.

DiffrnMeasurement - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_MEASUREMENT category record details about the device used to orient and/or position the crystal during data measurement and the manner in which the diffraction data were measured.

DiffrnMeasurement(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnMeasurement

DiffrnMeasurement(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnMeasurement

DiffrnMeasurementBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

DiffrnMeasurementBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

DiffrnOrient - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the orientation of the crystal axes to the diffractometer goniometer.

DiffrnOrient(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnOrient

DiffrnOrientBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientBuilder

DiffrnOrientMatrix - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the matrix specifying the orientation of the crystal axes to the diffractometer goniometer.

DiffrnOrientMatrix - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_ORIENT_MATRIX category record details about the orientation matrix used in the measurement of the diffraction data.

DiffrnOrientMatrix(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

DiffrnOrientMatrix(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnOrientMatrix

DiffrnOrientMatrixBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

DiffrnOrientMatrixBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

DiffrnOrientRefln - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the reflections used to calculate the matrix which gives the orientation of the crystal axes to the diffractometer goniometer.

DiffrnOrientRefln - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_ORIENT_REFLN category record details about the reflections that define the orientation matrix used in the measurement of the diffraction intensities.

DiffrnOrientRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnOrientRefln

DiffrnOrientRefln(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnOrientRefln

DiffrnOrientReflnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

DiffrnOrientReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

DiffrnRadiation - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the wavelength of the radiation used in measuring diffraction intensities.

DiffrnRadiation - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_RADIATION category describe the radiation used in measuring the diffraction intensities, its collimation and monochromatization before the sample.

DiffrnRadiation(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnRadiation

DiffrnRadiation(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnRadiation

DiffrnRadiationBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

DiffrnRadiationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

DiffrnRadiationWavelength - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the wavelength of the radiation used in measuring diffraction intensities.

DiffrnRadiationWavelength - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_RADIATION_WAVELENGTH category describe the wavelength of the radiation used to measure the diffraction intensities.

DiffrnRadiationWavelength(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnRadiationWavelength

DiffrnRadiationWavelength(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

DiffrnRadiationWavelengthBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

DiffrnRadiationWavelengthBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder

DiffrnRefln - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the reflection measurements, prior to data reduction and merging.

DiffrnRefln - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_REFLN category record details about the intensities in the diffraction data set identified by _diffrn_refln.diffrn_id.

DiffrnRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnRefln

DiffrnRefln(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnRefln

DiffrnReflnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

DiffrnReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

DiffrnReflns - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the overall reflection measurement information.

DiffrnReflns - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_REFLNS category record details about the set of intensities measured in the diffraction experiment.

DiffrnReflns(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnReflns

DiffrnReflns(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnReflns

DiffrnReflnsBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

DiffrnReflnsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

DiffrnReflnsClass - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify different classes of reflections in the raw measured diffraction data.

DiffrnReflnsClass - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_REFLNS_CLASS category record details about the classes of reflections measured in the diffraction experiment.

DiffrnReflnsClass(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnReflnsClass

DiffrnReflnsClass(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnReflnsClass

DiffrnReflnsClassBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

DiffrnReflnsClassBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

DiffrnReflnsTransfMatrix - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

DiffrnReflnsTransfMatrix(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

DiffrnReflnsTransfMatrixBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

DiffrnScaleGroup - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the groups of reflections in the raw measured diffraction data with different relative scales.

DiffrnScaleGroup - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_SCALE_GROUP category record details of the scaling factors applied to place all intensities in the reflection lists on a common scale.

DiffrnScaleGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnScaleGroup

DiffrnScaleGroup(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnScaleGroup

DiffrnScaleGroupBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnScaleGroupBuilder

DiffrnScaleGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnScaleGroupBuilder

DiffrnSource - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify information about the radiation source.

DiffrnSource - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_SOURCE category record details of the source of radiation used in the diffraction experiment.

DiffrnSource(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnSource

DiffrnSource(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnSource

DiffrnSourceBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

DiffrnSourceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

DiffrnStandard - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify information about the standard reflections used in the diffraction measurement process.

DiffrnStandard(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnStandard

DiffrnStandardBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

DiffrnStandardRefln - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the "standard" reflections measured repeatedly to monitor variations in intensity due to source flux, environment conditions or crystal quality.

DiffrnStandardRefln - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_STANDARD_REFLN category record details about the reflections treated as standards during the measurement of a set of diffraction intensities.

DiffrnStandardRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnStandardRefln

DiffrnStandardRefln(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnStandardRefln

DiffrnStandardReflnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

DiffrnStandardReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

DiffrnStandards - Class in org.rcsb.cif.schema.core

DiffrnStandards - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_STANDARDS category record details about the set of standard reflections used to monitor intensity stability during the measurement of diffraction intensities.

DiffrnStandards(Category) - Constructor for class org.rcsb.cif.schema.mm.DiffrnStandards

DiffrnStandards(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DiffrnStandards

DiffrnStandardsBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

DiffrnStandardsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

digest(BlockBuilder<? extends CifFileBuilder>) - Method in class org.rcsb.cif.model.builder.CifFileBuilderImpl

digest(BlockBuilder<? extends CifFileBuilder>) - Method in interface org.rcsb.cif.model.CifFileBuilder

A hook to make this instance aware of the data in all child nodes.

digest(CategoryBuilder<? extends BlockBuilder<CifCoreFileBuilder>, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

digest(CategoryBuilder<? extends BlockBuilder<P>, P>) - Method in interface org.rcsb.cif.model.BlockBuilder

A hook to make this instance aware of the data in all child nodes.

digest(CategoryBuilder<? extends BlockBuilder<P>, P>) - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

digest(FloatColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

digest(FloatColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder

digest(FloatColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

digest(FloatColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in interface org.rcsb.cif.model.CategoryBuilder

A hook to make this instance aware of the data in all child nodes.

digest(IntColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

digest(IntColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder

digest(IntColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

digest(IntColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in interface org.rcsb.cif.model.CategoryBuilder

A hook to make this instance aware of the data in all child nodes.

digest(StrColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

digest(StrColumnBuilder<? extends CategoryBuilder<CifCoreBlockBuilder, CifCoreFileBuilder>, CifCoreBlockBuilder, CifCoreFileBuilder>) - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder

digest(StrColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

digest(StrColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in interface org.rcsb.cif.model.CategoryBuilder

A hook to make this instance aware of the data in all child nodes.

Display - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to enumerate the display parameters used in the discipline.

Display(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Display

DisplayBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayBuilder

DisplayColour - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to enumerate the display colour codes used in the discipline.

DisplayColour(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.DisplayColour

DisplayColourBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

E

Em2dCrystalEntity - Class in org.rcsb.cif.schema.mm

Data items in the EM_SYMMETRY_2DX category record 2D crystal symmetry parameters utilized in a 3DEM reconstruction.

Em2dCrystalEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Em2dCrystalEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

Em2dProjectionSelection - Class in org.rcsb.cif.schema.mm

Data items in the EM_2D_PROJECTION_SELECTION category record details of images from scanned micrographs and the number of particles selected from a scanned set of micrographs.

Em2dProjectionSelection(Category) - Constructor for class org.rcsb.cif.schema.mm.Em2dProjectionSelection

Em2dProjectionSelectionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

Em3dCrystalEntity - Class in org.rcsb.cif.schema.mm

Data items in the EM_SYMMETRY_3DX category record 3D crystal symmetry parameters utilized in 3DEM reconstruction averaging.

Em3dCrystalEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Em3dCrystalEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

Em3dFitting - Class in org.rcsb.cif.schema.mm

Data items in the 3D_FITTING category record details of the method of fitting atomic coordinates from a PDB file into a 3d-em volume map file

Em3dFitting(Category) - Constructor for class org.rcsb.cif.schema.mm.Em3dFitting

Em3dFittingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

Em3dFittingList - Class in org.rcsb.cif.schema.mm

Data items in the 3D_FITTING_LIST category lists the methods of fitting atomic coordinates from a PDB file into a 3d-em volume map file

Em3dFittingList(Category) - Constructor for class org.rcsb.cif.schema.mm.Em3dFittingList

Em3dFittingListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

Em3dReconstruction - Class in org.rcsb.cif.schema.mm

Data items in the EM_3D_RECONSTRUCTION category record details of the 3D reconstruction procedure from 2D projections.

Em3dReconstruction(Category) - Constructor for class org.rcsb.cif.schema.mm.Em3dReconstruction

Em3dReconstructionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

EmAdmin - Class in org.rcsb.cif.schema.mm

Administration-related data items

EmAdmin(Category) - Constructor for class org.rcsb.cif.schema.mm.EmAdmin

EmAdminBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

EmAssembly - Class in org.rcsb.cif.schema.mm

Data items in the EM_ASSEMBLY category record details about the imaged EM sample.

EmAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.EmAssembly

EmAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

EmAuthorList - Class in org.rcsb.cif.schema.mm

Category to collect the authors of this entry

EmAuthorList(Category) - Constructor for class org.rcsb.cif.schema.mm.EmAuthorList

EmAuthorListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAuthorListBuilder

EmBuffer - Class in org.rcsb.cif.schema.mm

Data items in the BUFFER category record details of the sample buffer.

EmBuffer(Category) - Constructor for class org.rcsb.cif.schema.mm.EmBuffer

EmBufferBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

EmBufferComponent - Class in org.rcsb.cif.schema.mm

Buffer category

EmBufferComponent(Category) - Constructor for class org.rcsb.cif.schema.mm.EmBufferComponent

EmBufferComponentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

EmCrystalFormation - Class in org.rcsb.cif.schema.mm

Description of growth of a 2D, 3D, or helical crystal array.

EmCrystalFormation(Category) - Constructor for class org.rcsb.cif.schema.mm.EmCrystalFormation

EmCrystalFormationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

EmCtfCorrection - Class in org.rcsb.cif.schema.mm

Description of the Contrast Transfer Function (CTF) correction

EmCtfCorrection(Category) - Constructor for class org.rcsb.cif.schema.mm.EmCtfCorrection

EmCtfCorrectionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

EmDbReference - Class in org.rcsb.cif.schema.mm

Category holds links to raw data sources for the entry, e.g., held by a remote server.

EmDbReference(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDbReference

EmDbReferenceAuxiliary - Class in org.rcsb.cif.schema.mm

Category holds links to raw data sources for the entry, e.g., held by a remote server.

EmDbReferenceAuxiliary(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDbReferenceAuxiliary

EmDbReferenceAuxiliaryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder

EmDbReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

EmDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the EM_DEPOSITOR INFO category record parameters for EM depositions that are provided by the depositor

EmDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDepositorInfo

EmDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepositorInfoBuilder

EmDepui - Class in org.rcsb.cif.schema.mm

Some internal items to power the deposition interface

EmDepui(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDepui

EmDepuiBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

EmDetector - Class in org.rcsb.cif.schema.mm

Data items in the EM_DETECTOR category record details of the image detector type.

EmDetector(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDetector

EmDetectorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

EmDiffraction - Class in org.rcsb.cif.schema.mm

Microscopy parameters relevant only for crystallography

EmDiffraction(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDiffraction

EmDiffractionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionBuilder

EmDiffractionShell - Class in org.rcsb.cif.schema.mm

Statistical parameters for electron diffraction measurements within a resolution shell

EmDiffractionShell(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDiffractionShell

EmDiffractionShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

EmDiffractionStats - Class in org.rcsb.cif.schema.mm

Statistical parameters for electron diffraction measurements

EmDiffractionStats(Category) - Constructor for class org.rcsb.cif.schema.mm.EmDiffractionStats

EmDiffractionStatsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

EmEmbedding - Class in org.rcsb.cif.schema.mm

Sugar embedding category

EmEmbedding(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEmbedding

EmEmbeddingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEmbeddingBuilder

EmEntityAssembly - Class in org.rcsb.cif.schema.mm

Data items in the EM_ENTITY_ASSEMBLY category record details about each component of the complex.

EmEntityAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEntityAssembly

EmEntityAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

EmEntityAssemblyMolwt - Class in org.rcsb.cif.schema.mm

Data items in this category record details about the molecular weight of an assembly component of the sample.

EmEntityAssemblyMolwt(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

EmEntityAssemblyMolwtBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

EmEntityAssemblyNaturalsource - Class in org.rcsb.cif.schema.mm

Data items in this category record taxonomic details about the natural source for EM assemblies and assembly components.

EmEntityAssemblyNaturalsource(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

EmEntityAssemblyNaturalsourceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

EmEntityAssemblyRecombinant - Class in org.rcsb.cif.schema.mm

Data items in this category record details about recombinant expression of the assembly or assembly component.

EmEntityAssemblyRecombinant(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

EmEntityAssemblyRecombinantBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

EmEulerAngleAssignment - Class in org.rcsb.cif.schema.mm

Category to describe the euler angle assignement

EmEulerAngleAssignment(Category) - Constructor for class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

EmEulerAngleAssignmentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

EmExperiment - Class in org.rcsb.cif.schema.mm

Data items in the EM_EXPERIMENT category provide high-level classification of the EM experiment.

EmExperiment(Category) - Constructor for class org.rcsb.cif.schema.mm.EmExperiment

EmExperimentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

EmFiducialMarkers - Class in org.rcsb.cif.schema.mm

Description of fiducial markers.

EmFiducialMarkers(Category) - Constructor for class org.rcsb.cif.schema.mm.EmFiducialMarkers

EmFiducialMarkersBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFiducialMarkersBuilder

EmFigureDepositorInfo - Class in org.rcsb.cif.schema.mm

Listing of image files (figures) associated with an EMDB entry

EmFigureDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

EmFigureDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFigureDepositorInfoBuilder

EmFinalClassification - Class in org.rcsb.cif.schema.mm

Information about the final image classification

EmFinalClassification(Category) - Constructor for class org.rcsb.cif.schema.mm.EmFinalClassification

EmFinalClassificationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

EmFocusedIonBeam - Class in org.rcsb.cif.schema.mm

Description of sectioning by focused_ion_beam

EmFocusedIonBeam(Category) - Constructor for class org.rcsb.cif.schema.mm.EmFocusedIonBeam

EmFocusedIonBeamBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

EmFscCurve - Class in org.rcsb.cif.schema.mm

Data items in the EMD_VALIDATION_FSC_CURVE category record details of the Fourier Shell Correlation (FSC) curve file.

EmFscCurve(Category) - Constructor for class org.rcsb.cif.schema.mm.EmFscCurve

EmFscCurveBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFscCurveBuilder

EmGridPretreatment - Class in org.rcsb.cif.schema.mm

Data items describing glow discharge pretreatment for an EM grid

EmGridPretreatment(Category) - Constructor for class org.rcsb.cif.schema.mm.EmGridPretreatment

EmGridPretreatmentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

EmHelicalEntity - Class in org.rcsb.cif.schema.mm

Data items in the EM_HELICAL_ENTITY category record details for a helical or filament type of assembly component.

EmHelicalEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.EmHelicalEntity

EmHelicalEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

EmHighPressureFreezing - Class in org.rcsb.cif.schema.mm

Description of high pressure freezing

EmHighPressureFreezing(Category) - Constructor for class org.rcsb.cif.schema.mm.EmHighPressureFreezing

EmHighPressureFreezingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHighPressureFreezingBuilder

EmImageProcessing - Class in org.rcsb.cif.schema.mm

Data items in the EM_IMAGE_PROCESSING category record details of the EM image processing procedure.

EmImageProcessing(Category) - Constructor for class org.rcsb.cif.schema.mm.EmImageProcessing

EmImageProcessingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageProcessingBuilder

EmImageRecording - Class in org.rcsb.cif.schema.mm

Data items in the EM_IMAGE_RECORDING category record details of the image recording (either film/microdensitometer or electronic detector) and parameters for image digitization.

EmImageRecording(Category) - Constructor for class org.rcsb.cif.schema.mm.EmImageRecording

EmImageRecordingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

EmImageScans - Class in org.rcsb.cif.schema.mm

Data items in the EM_IMAGE_SCANS category record details of the image scanning device (microdensitometer) and parameters for digitization of the image.

EmImageScans(Category) - Constructor for class org.rcsb.cif.schema.mm.EmImageScans

EmImageScansBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

EmImaging - Class in org.rcsb.cif.schema.mm

Data items in the EM_IMAGING category record details about the parameters used in imaging the sample in the electron microscope.

EmImaging(Category) - Constructor for class org.rcsb.cif.schema.mm.EmImaging

EmImagingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

EmImagingOptics - Class in org.rcsb.cif.schema.mm

Description of a few specialist optics apparatus

EmImagingOptics(Category) - Constructor for class org.rcsb.cif.schema.mm.EmImagingOptics

EmImagingOpticsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

EmInterpretFigure - Class in org.rcsb.cif.schema.mm

Listing of all layer line files associated with the EM entry

EmInterpretFigure(Category) - Constructor for class org.rcsb.cif.schema.mm.EmInterpretFigure

EmInterpretFigureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmInterpretFigureBuilder

EmLayerLines - Class in org.rcsb.cif.schema.mm

Listing of all layer line files associated with the EM entry

EmLayerLines(Category) - Constructor for class org.rcsb.cif.schema.mm.EmLayerLines

EmLayerLinesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesBuilder

EmLayerLinesDepositorInfo - Class in org.rcsb.cif.schema.mm

Listing of layer line files associated with the EM entry

EmLayerLinesDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

EmLayerLinesDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder

EmMap - Class in org.rcsb.cif.schema.mm

Data items in the EMD_MAP category record parameters of the CCP4 binary-format map file header (see ftp://ftp.wwpdb.org/pub/emdb/doc/map_format/EMDB_mapFormat_v1.0.pdf), parameters derived from the map header, pixel size, contour level, and annotation details from the depositor.

EmMap(Category) - Constructor for class org.rcsb.cif.schema.mm.EmMap

EmMapBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

EmMapDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the EM_MAP_DEPOSITOR INFO category record map parameters that are provided by the depositor

EmMapDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmMapDepositorInfo

EmMapDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

EmMaskDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the EM_MASK_DEPOSITOR_INFO category record mask parameters that are provided by the depositor

EmMaskDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

EmMaskDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

EmObsolete - Class in org.rcsb.cif.schema.mm

List of EMD entries made obsolete by this entry.

EmObsolete(Category) - Constructor for class org.rcsb.cif.schema.mm.EmObsolete

EmObsoleteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmObsoleteBuilder

EmParticleSelection - Class in org.rcsb.cif.schema.mm

Data items in this category record details of images from scanned micrographs and the number of particles selected from a scanned set of micrographs.

EmParticleSelection(Category) - Constructor for class org.rcsb.cif.schema.mm.EmParticleSelection

EmParticleSelectionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

EmptyCategory(String) - Constructor for class org.rcsb.cif.model.Category.EmptyCategory

EmptyColumn(String) - Constructor for class org.rcsb.cif.model.Column.EmptyColumn

EmptyColumnException - Exception in org.rcsb.cif

Indicates that data for an empty column was requested.

EmptyColumnException(String) - Constructor for exception org.rcsb.cif.EmptyColumnException

EmSamplePreparation - Class in org.rcsb.cif.schema.mm

Data items in the EM_SAMPLE_PREPARATION category record details of sample conditions prior to and upon loading onto grid support.

EmSamplePreparation(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSamplePreparation

EmSamplePreparationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

EmSampleSupport - Class in org.rcsb.cif.schema.mm

Data items in the EM_SAMPLE_SUPPORT category record details of the electron microscope grid type, grid support film and pretreatment of whole before sample is applied

EmSampleSupport(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSampleSupport

EmSampleSupportBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

EmShadowing - Class in org.rcsb.cif.schema.mm

Data items related to shadowing of an EM specimen

EmShadowing(Category) - Constructor for class org.rcsb.cif.schema.mm.EmShadowing

EmShadowingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

EmSingleParticleEntity - Class in org.rcsb.cif.schema.mm

Data items in the EM_SINGLE_PARTICLE_ENTITY category provide the details of the symmetry for a single particle entity type.

EmSingleParticleEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSingleParticleEntity

EmSingleParticleEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

EmSoftware - Class in org.rcsb.cif.schema.mm

Description of the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

EmSoftware(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSoftware

EmSoftwareBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

EmSpecimen - Class in org.rcsb.cif.schema.mm

Data items in the EMD_SPECIMEN category record details about specimens prepared for imaging by electron microscopy.

EmSpecimen(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSpecimen

EmSpecimenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

EmStaining - Class in org.rcsb.cif.schema.mm

Staining category

EmStaining(Category) - Constructor for class org.rcsb.cif.schema.mm.EmStaining

EmStainingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

EmStartModel - Class in org.rcsb.cif.schema.mm

The startup model employed to begin refinement of the parameters for a 3DEM reconstruction

EmStartModel(Category) - Constructor for class org.rcsb.cif.schema.mm.EmStartModel

EmStartModelBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

EmStructureFactors - Class in org.rcsb.cif.schema.mm

Listing of all structure factor files associated with the EM entry

EmStructureFactors(Category) - Constructor for class org.rcsb.cif.schema.mm.EmStructureFactors

EmStructureFactorsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsBuilder

EmStructureFactorsDepositorInfo - Class in org.rcsb.cif.schema.mm

Structure factor files associated with the EM entry

EmStructureFactorsDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

EmStructureFactorsDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder

EmSupersede - Class in org.rcsb.cif.schema.mm

List of newer entries that replace this entry.

EmSupersede(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSupersede

EmSupersedeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupersedeBuilder

EmSupportFilm - Class in org.rcsb.cif.schema.mm

Data items to describe films supporting the specimen

EmSupportFilm(Category) - Constructor for class org.rcsb.cif.schema.mm.EmSupportFilm

EmSupportFilmBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

EmTomography - Class in org.rcsb.cif.schema.mm

Microscopy parameters only relevant for tomography

EmTomography(Category) - Constructor for class org.rcsb.cif.schema.mm.EmTomography

EmTomographyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

EmTomographySpecimen - Class in org.rcsb.cif.schema.mm

Description specimen preparation for imaging using tomography.

EmTomographySpecimen(Category) - Constructor for class org.rcsb.cif.schema.mm.EmTomographySpecimen

EmTomographySpecimenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

EmUltramicrotomy - Class in org.rcsb.cif.schema.mm

Description of sectioning by ultramicrotomy

EmUltramicrotomy(Category) - Constructor for class org.rcsb.cif.schema.mm.EmUltramicrotomy

EmUltramicrotomyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

EmVirusEntity - Class in org.rcsb.cif.schema.mm

Data items in the EM_VIRUS_ENTITY category record details of the icosahedral virus.

EmVirusEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.EmVirusEntity

EmVirusEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

EmVirusNaturalHost - Class in org.rcsb.cif.schema.mm

Data items in this category record details of a virus entity.

EmVirusNaturalHost(Category) - Constructor for class org.rcsb.cif.schema.mm.EmVirusNaturalHost

EmVirusNaturalHostBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

EmVirusShell - Class in org.rcsb.cif.schema.mm

Data items in the EMD_VIRUS_SHELL category record details of the viral shell number, shell diameter, and icosahedral triangulation number.

EmVirusShell(Category) - Constructor for class org.rcsb.cif.schema.mm.EmVirusShell

EmVirusShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

EmVitrification - Class in org.rcsb.cif.schema.mm

Data items in the EM_VITRIFICATION category record details about the method and cryogen used in rapid freezing of the sample on the grid prior to its insertion in the electron microscope

EmVitrification(Category) - Constructor for class org.rcsb.cif.schema.mm.EmVitrification

EmVitrificationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

EmVolumeSelection - Class in org.rcsb.cif.schema.mm

Volume selection in image processing

EmVolumeSelection(Category) - Constructor for class org.rcsb.cif.schema.mm.EmVolumeSelection

EmVolumeSelectionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

encode() - Method in class org.rcsb.cif.binary.data.Float32Array

encode() - Method in class org.rcsb.cif.binary.data.Float64Array

encode() - Method in class org.rcsb.cif.binary.data.Int16Array

encode() - Method in class org.rcsb.cif.binary.data.Int32Array

encode() - Method in class org.rcsb.cif.binary.data.Int8Array

encode() - Method in interface org.rcsb.cif.binary.data.NumberArray

Encode this array of numbers directly as binary data (useful for single values that won't benefit from more elaborate encoding chains).

encode() - Method in class org.rcsb.cif.binary.data.Uint16Array

encode() - Method in class org.rcsb.cif.binary.data.Uint32Array

encode() - Method in class org.rcsb.cif.binary.data.Uint8Array

encode(H) - Method in interface org.rcsb.cif.binary.encoding.Encoding

Move one step down the encoding deque.

encode(Map<String, Object>) - Static method in class org.rcsb.cif.binary.codec.MessagePackCodec

encode(FloatArray) - Method in class org.rcsb.cif.binary.encoding.FixedPointEncoding

encode(FloatArray) - Method in class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

encode(Int32Array) - Method in class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

encode(Int32Array, String) - Static method in class org.rcsb.cif.binary.Classifier

Encode an Int32Array using the given encoding strategy.

encode(IntArray) - Method in class org.rcsb.cif.binary.encoding.RunLengthEncoding

encode(StringArray) - Method in class org.rcsb.cif.binary.encoding.StringArrayEncoding

encode(DeltaEncoding<Int16Array>) - Method in class org.rcsb.cif.binary.data.Int16Array

encode(DeltaEncoding<Int32Array>) - Method in class org.rcsb.cif.binary.data.Int32Array

encode(DeltaEncoding<Int8Array>) - Method in class org.rcsb.cif.binary.data.Int8Array

encode(DeltaEncoding<T>) - Method in interface org.rcsb.cif.binary.data.SignedIntArray

encode(FixedPointEncoding) - Method in interface org.rcsb.cif.binary.data.FloatArray

encode(IntegerPackingEncoding) - Method in class org.rcsb.cif.binary.data.Int32Array

encode(RunLengthEncoding) - Method in interface org.rcsb.cif.binary.data.IntArray

encode(StringArrayEncoding) - Method in class org.rcsb.cif.binary.data.StringArray

encode(T) - Method in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

encode(T) - Method in class org.rcsb.cif.binary.encoding.DeltaEncoding

EncodedData<D> - Interface in org.rcsb.cif.binary.data

Data is always bundled with encoding information to handle de- and encoding.

encoder(String) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

The name of the encoder which should be written to files.

Encoding<H extends EncodedData<?>,L extends EncodedData<?>> - Interface in org.rcsb.cif.binary.encoding

Represents a single encoding or decoding step for a column.

EncodingException - Exception in org.rcsb.cif

EncodingException(String) - Constructor for exception org.rcsb.cif.EncodingException

EncodingException(String, Exception) - Constructor for exception org.rcsb.cif.EncodingException

encodingStrategyHint(String) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Read EncodingStrategyHint data from a JSON string.

encodingStrategyHint(String, String, String, int) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Manually specify encoding strategy and precision for a column.

encodingStrategyHint(Path) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Read EncodingStrategyHint data from a JSON file.

encodingStrategyHint(List<EncodingStrategyHint>) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Manually specify encoding strategy and precision for a column.

encodingStrategyHint(EncodingStrategyHint...) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Manually specify encoding strategy and precision for a column.

EncodingStrategyHint - Class in org.rcsb.cif

Encoding hints can be used to specify the encoding and/or precision for particular columns in the data structure.

EncodingStrategyHint() - Constructor for class org.rcsb.cif.EncodingStrategyHint

EncodingStrategyHint(String, String, String, Integer) - Constructor for class org.rcsb.cif.EncodingStrategyHint

Construct a hint from scratch.

enter_11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_2dCrystalGrowId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enter_31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enter_33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enter_3dFittingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterAbsoluteConfiguration() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterAbsoluteConfiguration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterAbsorptCoefficientMu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterAbsorptCoefficientMu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionTMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionTMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionTMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionTMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterAbsorptCorrectionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterAbsorptProcessDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterAbsorptProcessDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterAbsStructureFlackSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterAbsStructureFlackSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterAbsStructureRogersSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterAbsStructureRogersSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterAbstract() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterAbstract() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterAbstract() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterAbstract() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterAbstractIdCAS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterAbstractIdCAS() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterACalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterACalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterACalcAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterAcceleratingVoltage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterAccepted() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterAccepted() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterAccessCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

enterAccessionCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterAcknowledgements() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterAcknowledgements() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterActionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterActionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterActionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterActionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterActualPixelSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditAuthorBuilder

enterAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

enterAddress1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterAddress2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterAddress3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterAdpEigenSystem() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterAdpMatrixBeta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterAdpOutliersLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterAdpOutliersZero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterAdpType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAdpType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAggregationState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterAggregationState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterAlgorithm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterAlignId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterAlignId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterAlignId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterAlignmentFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterAlignmentProcedure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterAlignPos() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterAllAtomClashscore() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterAllChains() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterAlphaTolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterAltAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterAltCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltGenBuilder

enterAmbientEnvironment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientEnvironment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientPressure() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientPressureEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientPressureEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientPressureGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientPressureGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientPressureLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientPressureLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientPressureSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemp() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientTempDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTempDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientTemperature() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemperatureDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemperatureGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemperatureLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTemperatureSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTempEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTempEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientTempGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTempGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbientTempLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterAmbientTempLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterAmbiguousStoichiometryFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterAMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterAMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterAMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterAmplitudeCorrection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterAmplitudeCorrectionFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterAmplitudeCorrectionSpace() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterAnalysisId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterAnalytical() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterAnalytical() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterAnalyticalMass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterAnalyticalMassPercent() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterAnalyticalMassPercent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterAngle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

enterAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAngleAlpha() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterAngleAlphaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleAlphaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleAlphaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleBeta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterAngleBetaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleBetaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleBetaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleChi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleChi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAngleChi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleChi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAngleDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAngleDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAngleDHA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAngleDHA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAngleDHAEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAngleDHAEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAngleDHASu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAngleEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterAngleEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

enterAngleGamma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterAngleGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterAngleGammaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleGammaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterAngleGammaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAngleKappa() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleKappa() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAngleKappa() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleKappa() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAngleLigandMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterAngleLigandRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterAngleLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleOmega() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleOmega() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAngleOmega() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleOmega() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAngleOutOfPlane() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterAngleOverallMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterAngleOverallRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterAnglePhi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAnglePhi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAnglePhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAnglePhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAnglePsi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAnglePsi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAnglePsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAnglePsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAngleStandardDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAngleSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAngleTargetValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAngleTheta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleTheta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAngleTheta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterAngleTheta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAngleThresholdEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleThresholdMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterAngleValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAngularRotationPerSubunit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterAnisoB11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoB33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterAnisoB33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoB33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoRatio() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisotropy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterAnisoU11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnisoU33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAnisoU33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAnnealingDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

enterAnnotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterApparatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterApplication() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupBuilder

enterApplyDispersionToFcalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterAreaResolMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterAreaResolMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassLinkBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

enterAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder

enterAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterAssociatedUrl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterAstigmatism() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterASTMCodeType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterASTMCodeValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordinateModelBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAsymGenBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterAsymIdList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

enterAsymIdList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterAtcc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterAtmosphere() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterAtmosphere() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterAtmosphere() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterATolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterAtom() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtom1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

enterAtom1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterAtom1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnBondBuilder

enterAtom1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterAtom1CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtom1CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterAtom1CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtom1Valence() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterAtom1Valence() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterAtom2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

enterAtom2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterAtom2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnBondBuilder

enterAtom2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterAtom2CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtom2CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterAtom2CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtom2Valence() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterAtom2Valence() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterAtom3CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtom3CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtom4CompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtomCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirAtomBuilder

enterAtomCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterAtomCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder

enterAtomConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterAtomConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterAtomDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterAtomGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterAtomicMass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterAtomicMass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterAtomicNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirAtomBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneAtomBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirAtomBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemCompBondBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemCompBondBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterAtomSite() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSiteAniso() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomSiteAnisotrop() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomSiteAnisotrop() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAsymId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAsymId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAsymIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthAsymIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthAsymIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthAtomIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthAtomIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthAtomIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthCompId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthCompId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthCompIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthCompIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthCompIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthSeqId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteAuthSeqId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteAuthSeqIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthSeqIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteAuthSeqIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteId4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteIdA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteIdD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteIdH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabel3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabel3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabel4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAltId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAltId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAltIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAltIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAltIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAsymId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAsymId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAsymIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAsymIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAsymIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelAtomId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelAtomIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAtomIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelAtomIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelCompId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelCompId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelCompIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelCompIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelCompIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelSeqId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterAtomSiteLabelSeqId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterAtomSiteLabelSeqIdA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelSeqIdD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSiteLabelSeqIdH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterAtomSites() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomSites() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSitesAlt() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSitesAltEns() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSitesAltGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSitesCartnTransform() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomSitesFootnote() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomSitesFractTransform() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterAtomType1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder

enterAtomType2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder

enterAtomTypeScat() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAtomTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterAtomTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterAttachedHydrogens() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterAttachedHydrogens() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAttenuatorCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterAttenuatorCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterAtUnitMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterAudit() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAuditAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAuditAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAuditConform() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAuditConform() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAuditContactAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAuditContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAuditLink() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterAuditLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequencePatternBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthAsymIdList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthFileContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterAuthFileFormatType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterAuthFileLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterAuthFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterAuthFileSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterAuthName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAuthorListBuilder

enterAuthorApprovalType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterAuthorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterAuthorProvidedFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterAuthorReleaseStatusCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterAuthors() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthPDBInsertId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthReqRelDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterAverageConstraintsPerResidue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterAverageConstraintViolationsPerResidue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterAverageDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterAverageExposureTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterAverageTorsionAngleConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterAvgElectronDosePerImage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterAvgNumImagesPerClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterAvREq() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterAvREq() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterAvREquivalents() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterAvREquivalents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterAvSgI_I() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterAvSgI_I() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterAvSigmaIOverNetI() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterAvSigmaIOverNetI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterAvSuIOverI() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterAvSunetIOverNetI() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterAvUI_I() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterAvUI_I() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterAvUnetI_netI() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterAvUnetI_netI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterAxes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterAxes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterAxes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterAxialRisePerSubunit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterAxialSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterAxis1AngleIncrement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxis1MaxAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxis1MinAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxis2AngleIncrement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxis2MaxAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxis2MinAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterAxisOrderFast() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterAxisOrderMedium() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterAxisOrderSlow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterAxisType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder

enterB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterB11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB11Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB11Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB12Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB12Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB13Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB13Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB22Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB22Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB23Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB23Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterB33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterB33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterB33Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterB33Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBCalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterBCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterBCalcAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterBeamPositionX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterBeamPositionY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegDbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterBegDbSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterBeginInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterBeginMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterBeginResNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterBeginSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterBegPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterBegSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterBegSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterBEquivGeomMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBEquivGeomMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterBEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterBEquivGeomMeanSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterBetaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellAngleBuilder

enterBetaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterBetaTolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterBindingPartnerAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterBindingPartnerEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterBindModeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncEnzymeBuilder

enterBindModeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncOtherBuilder

enterBindModeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncRegulatoryBuilder

enterBindModeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncStructuralBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityAssemblyBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructBiolFuncBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolKeywordsBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterBIsoEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterBIsoEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterBIsoMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterBisoMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBIsoMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterBisoMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBisoMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterBisoMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterBIsoMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterBisoMeanMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterBisoMeanPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterBisoMeanSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterBisoMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBIsoMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterBIsoOrEquiv() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterBIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterBIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterBIsoOrEquivSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterBIsoSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterBIsoWilsonEstimate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterBlock(String) - Method in class org.rcsb.cif.model.builder.CifFileBuilderImpl

enterBlock(String) - Method in interface org.rcsb.cif.model.CifFileBuilder

Descend 1 level and enter a new Block.

enterBlock(String) - Method in class org.rcsb.cif.schema.core.CifCoreFileBuilder

enterBlock(String) - Method in class org.rcsb.cif.schema.mm.MmCifFileBuilder

enterBlockCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterBlockCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditLinkBuilder

enterBlockCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditLinkBuilder

enterBlockDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditLinkBuilder

enterBlockDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditLinkBuilder

enterBlockDoi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterBlue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

enterBmean_Bwilson() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterBMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterBMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterBond() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterBondAngleRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterBondAngleRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterBondDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterBondDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterBondDistanceIncr() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterBondDistanceMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterBondLigandMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterBondLigandRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterBondOverallMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterBondOverallRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterBondStandardDeviation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterBondTargetValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterBondType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterBondValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterBookIdISBN() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterBookIdISBN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterBookPublisher() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterBookPublisher() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterBookPublisherCity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterBookPublisherCity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterBookTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterBookTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterBravaisType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterBSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBTolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterBuckle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterBufferName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterBufferVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterBWilson() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterBWilsonScale() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterC1C2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC1C2C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC1C2C3C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC1N19C24() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC1N19C68() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC1N91() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC2ApertureDiameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterC2C1N19() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC2C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC2C3C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC2C3C4O4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC2C3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3C4O4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3C4O4C1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3O3P() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC3O3PO5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4C3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4C3O3P() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4O4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4O4C1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4O4C1C2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC4O4C1N19() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC5C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC5C4C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC5C4C3C2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC5C4C3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterC5C4O4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterCalcAttachedAtom() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCalcAttachedAtom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCalcFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCalcFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCalibratedDefocusMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterCalibratedDefocusMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterCalibratedMagnification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterCameraLength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionBuilder

enterCarbonShiftsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterCarrierSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterCartnTransfMatrix11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransformAxes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransformAxes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterCartnTransfVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnXEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnXSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnYEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnYSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnZEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCartnZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterCartnZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterCartnZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterCartnZSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterCAS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCAS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterCassetteRotX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCassetteRotY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCassetteRotZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCategory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterCategory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublRequestedBuilder

enterCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder

enterCategory(String) - Method in interface org.rcsb.cif.model.BlockBuilder

Descend 1 level and enter a new Category.

enterCategory(String) - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

enterCategory(String) - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCategory(String) - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCategoryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryBuilder

enterCategoryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

enterCategoryViewName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryBuilder

enterCbetaDeviations() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterCell() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterCellA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellAngle() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCellAngleAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellAngleBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellAngleGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterCellLengthA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellLengthB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellLengthC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterCellMeasurement() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCellMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCellMeasurementRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCellMeasurementRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCellRefinement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterCellRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterCellSetting() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryBuilder

enterCellSetting() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterCellularLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterCenterFrequencyOffset() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterCenterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder

enterCenterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

enterCentringType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterChainAtomsYP() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

enterChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnpairBuilder

enterChainIdList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterChainRangeBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterChainRangeEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterChamberTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterCharge() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterChemComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterChemCompBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompChir() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompChirAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterChemCompLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompPlaneAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompTor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemCompTorValue() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemical() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterChemical() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemicalConnAtom() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterChemicalConnAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemicalConnBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterChemicalConnBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemicalConnNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterChemicalConnNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterChemicalFormula() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterChemicalFormula() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemicalName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterChemLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkChir() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkChirAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkPlaneAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkTor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemLinkTorValue() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterChemShift13CErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShift15NErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShift19FErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShift1HErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShift2HErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShift31PErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShiftReferenceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterChemShiftReferenceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterChemShiftUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterChemShiftVal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterChi1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterChi1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterChi2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterChi2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterChi3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterChi4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterChi5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterChiralCenterAtomAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterChiralCenterAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterChiralityOverallMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterChiralityOverallRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterChiralNeighborAtomAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterChiralNeighborAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterChirId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirAtomBuilder

enterChirId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirAtomBuilder

enterChiSquared() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterChiValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterChiValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterChrAberrationCorrector() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterCifCore() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryBuilder

enterCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

enterCitation() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCitation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCitationAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCitationAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCitationEditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterCitationEditor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationAuthorBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationEditorBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationAuthorBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationEditorBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReRefinementBuilder

enterCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterCity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterClass1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterClass2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterClassCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterClassCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterClassCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterClassCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterClassEvidenceCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterClassId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassLinkBuilder

enterClassification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterClassification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyProteinClassBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterClazz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

enterCleavageBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterCleavageEnzymes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterCleavageTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterCleavageTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterClosest() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterClustId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterClustId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterCOD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCOD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnAttenuatorBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnScaleGroupBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnAttenuatorBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnScaleGroupBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterCodeCAS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeCAS() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeCOD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeCSD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeICSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeICSD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodeMDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeMDF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodenASTM() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCodenASTM() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCodeNBS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodeNBS() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodenCambridge() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCodenCambridge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCodePDB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodePDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCodePDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCodePDF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCoeditorAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterCoeditorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublRequestedBuilder

enterCoeditorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorNotes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorNotes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoeditorPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterCoeditorPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterCoefficientMu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

enterCoefficientMu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterCollectionTimeTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterCollectionVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterCollimation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterCollimation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterCollimation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterColorBlue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterColorGreen() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterColorRed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterColour() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterColour() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterColourLustre() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterColourLustre() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterColourModifier() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterColourModifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterColourPrimary() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterColourPrimary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterColumnname() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterColumnSerialNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterColumnTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterColumnType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterColumnVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterComment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterComment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirAtomBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneAtomBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompImportBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompNonstandardBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompRelatedBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchListBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNonpolyBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterCompIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterCompIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterCompIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterCompIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterCompIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterCompIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterCompilerName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterCompilerVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterCompName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterComponent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterComponent1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterComponent1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterComponent2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterComponent2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterComponentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityListBuilder

enterComponentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

enterComponentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterComposition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterCompoundDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterCompoundDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterCompoundSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterCompoundSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterComputing() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterComputing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterConc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterConc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterConc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterConcAssayMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterConcDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterConcDeviceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterConcentrationErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterConcentrationRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterConcentrationRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterConcentrationUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterConcentrationUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterConcRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterConcUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterConcUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterConditionalCrosslinkFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterConditionsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterConditionsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterConditionsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterConditionsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterConditionsLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterConditionsLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterConformationType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder

enterConformerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder

enterConformersCalculatedTotalNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterConformerSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterConformerSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterConformersSubmittedTotalNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterConfTypeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterConnect() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterConnectTo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterConnTypeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterConstraintFilename() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterConstraintNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterConstraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterConstraintSubtype() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterConstraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterContactAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterContactAuthorAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthorAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactAuthorEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthorEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactAuthorEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterContactAuthorFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthorFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactAuthorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactAuthorPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactAuthorPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContactDistanceIncr() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterContactDistanceMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterContactLetter() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterContactLetter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterContentFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterContents() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

enterContents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterContents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

enterContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder

enterContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterContentValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterContinent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterContourLevel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterContourLevel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterContourLevel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterContourLevelSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterConvertUijToBetaij() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterConvertUisoToUij() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterCoolingDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

enterCoordAverageRmsdMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterCoordinateLinkage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterCoordinateLinkage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterCoordSection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbOriginalNdbCoordinatesBuilder

enterCoordsXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

enterCorrectionOperation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterCorrectionTMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

enterCorrectionTMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterCorrectionTMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

enterCorrectionTMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterCorrectionType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

enterCorrectionType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterCorrectionVal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterCorrelation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterCorrelation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterCorrelation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

enterCorrelation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterCorrelationCoeffFoToFcFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterCorrelationCoeffIoToIc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterCorrelationMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterCorrelationOverall() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterCorrelationSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterCorrelationSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

enterCorrespondingAuthorStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterCountry() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterCountry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterCountry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

enterCountry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterCountry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterCountry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterCountsBg1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterCountsBg1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterCountsBg2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterCountsBg2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterCountsNet() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterCountsNet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterCountsPeak() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterCountsPeak() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterCountsTotal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterCountsTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterCovalentBondRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterCovalentBondRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterCovalentGeomAnglesTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovalentGeomAnglesTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovalentGeomBondTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovalentGeomBondTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovalentGeomImpropersTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovalentGeomImpropersTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterCovarianceMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCovarianceMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterCovarianceMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterCreation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterCreation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptBuilder

enterCreationDate() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterCreationDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditBuilder

enterCreationMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterCreationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditBuilder

enterCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfTypeBuilder

enterCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnTypeBuilder

enterCriterion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterCromerMannA1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannA1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannA2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannA2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannA3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannA3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannA4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannA4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannB1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannB1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannB2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannB2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannB3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannB3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannB4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannB4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterCromerMannC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCromerMannCoeffs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterCrossCorrelationCoefficient() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterCrossCorrelationCoefficient() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterCrossfireX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossfireX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCrossfireXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossfireXy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossfireXy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCrossfireXyEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossfireY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossfireY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCrossfireYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrossLinkPartner() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

enterCruickshankDpiXyz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterCryogen() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterCryogenName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterCryoProtectant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterCrystalConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterCrystalDataId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterCrystalHits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterCrystalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterCrystalsNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterCrystalsNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterCrystalsPerUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterCrystalSupport() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterCrystalSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterCrystalSystem() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterCrystalSystem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

enterCrystalToDetectorDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrystalToDetectorDistanceEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrystalTreatment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterCrystalTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterCrystalType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterCrysxSpindle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrysxSpindleEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrysyVertical() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCrysyVerticalEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCryszBeam() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCryszBeamEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterCSamplingLength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterCSDHistory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterCSDHistory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterCTerminalSeqTag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCtfCorrectionMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterCTolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterCultureAdditives() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCultureBaseMedia() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCultureTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCultureTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCultureVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterCurrent() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterCurrent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterCurrent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterCurrentStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterCurrentVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditBuilder

enterCycleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

enterCycleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterCycleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterDataAnalysis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterDataAnalysisSoftwareList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterDataAnalysisVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterDatabase() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDatabase() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabase2() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabaseAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseBeginInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseBeginResNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseCode() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDatabaseCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Database2Builder

enterDatabaseEndInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseEndResNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseHosted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetListBuilder

enterDatabaseId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

enterDatabaseId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Database2Builder

enterDatabaseIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabaseIdCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterDatabaseIdCSD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterDatabaseIdMedline() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterDatabaseIdMedline() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterDatabaseName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterDatabasePDBCaveat() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabasePDBMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabasePDBRemark() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabasePDBRev() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabasePDBRevRecord() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabasePDBTvect() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDatabaseRelated() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDataCollection() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterDataCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder

enterDataContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

enterDataFileCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

enterDataFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

enterDataFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterDataFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterDataFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

enterDataFileSyntax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

enterDataReduction() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterDataReduction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterDataReductionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterDataReductionMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterDataReductionSoftwareList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterDataReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

enterDatasetDoi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterDatasetGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterDatasetGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupLinkBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLigandProbeBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterDatasetListIdDerived() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmRelatedDatasetsBuilder

enterDatasetListIdPrimary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmRelatedDatasetsBuilder

enterDataSetType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

enterDataType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterDataType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetListBuilder

enterDataValidationNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDataValidationNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDataVersionMajor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

enterDataVersionMinor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmObsoleteBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupersedeBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterDateAccepted() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateAccepted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateAuthorApproval() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateAuthorReleaseRequest() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterDateBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterDateBeginCycle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

enterDateBeginDeposition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateBeginProcessing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateBeginReleasePreparation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateChemicalShifts() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateDepositionForm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterDateEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterDateEndCycle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

enterDateEndProcessing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateFromCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateFromCoeditor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateHoldChemicalShifts() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateHoldCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateHoldNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateHoldNmrData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateHoldStructFact() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateManuscript() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateNmrData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfCsRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfMrRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfNDBRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfNmrDataRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfPDBRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOfSfRelease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateOriginal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterDatePrintersFinal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDatePrintersFinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDatePrintersFirst() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDatePrintersFirst() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateProofsIn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateProofsIn() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateProofsOut() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateProofsOut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateRecdCopyright() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateRecdCopyright() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateRecdElectronic() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateRecdElectronic() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateRecdHardCopy() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateRecdHardCopy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDateReleasedToPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateRevised() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateStructFact() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateSubmitted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDateToCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterDateToCoeditor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterDbAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterDbAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDbAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDbAlignBeg() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDbAlignBeg() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterDbAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDbAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterDbAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterDbCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterDbEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterDbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder

enterDbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterDbSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterDbSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterDbSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDbSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDCCVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterDecay() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterDecay() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterDecay() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterDecayPercent() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterDefn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterDefn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclExtraBuilder

enterDelta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterDeltaDeltaPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterDeltaPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterDeltaPhiFinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterDeltaPhiFinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterDeltaPhiInitial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterDeltaPhiInitial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterDeltaPhiSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterDenatureBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterDensityConnectivity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterDensityDiffrn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityDiffrn() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityIndex() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityIndexMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterDensityIndexMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityIndexSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterDensityIndexSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityMatthews() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDensityMaxSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityMaxSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDensityMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTemp() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMeasTempSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDensityMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDensityMinSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityMinSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDensityPercentSol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDensityRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityRatioMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityRatioSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterDensityRms() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityRms() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDensityRmsSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDensityRmsSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

enterDepDatasetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder

enterDepDatasetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder

enterDepDatasetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterDepDatasetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterDepDatasetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterDependencies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterDepositionDataSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterDepositionDataSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterDepositionDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterDepositionSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterDepositorHoldInstructions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterDepositSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeChemicalShifts() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeNmrData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeSequence() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepReleaseCodeStructFact() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterDepSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterDerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterDerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterDerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterDerSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryGroupBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder

enterDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterDescriptorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltEnsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevRecordBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEmbeddingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFigureDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFscCurveBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHighPressureFreezingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageProcessingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmInterpretFigureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmObsoleteBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupersedeBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmFeatureListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLigandProbeBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompRelatedBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapmanBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRefineBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReRefinementBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructEntityInstBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingAveragingBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingIsomorphousBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterDetectiveQuantumEfficiency() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterDetector() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterDetector() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterDetectorDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterDetectorDtime() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterDetectorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterDetectorMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterDetectorSpecific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterDetectorSpecific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterDetectorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterDetectorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterDetectSlitHoriz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterDetectSlitHoriz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterDetectSlitVert() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterDetectSlitVert() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterDetermination() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterDetermination() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirAtomBuilder

enterDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirAtomBuilder

enterDevice() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDevice() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDevice() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterDevice() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceClass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDeviceClass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDeviceDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceMake() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDeviceMake() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterDeviceType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterDeviceType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterDevIdeal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterDevIdealTarget() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterDiagnosticMessage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterDiameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFiducialMarkersBuilder

enterDiameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

enterDictLocation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditConformBuilder

enterDictLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditConformBuilder

enterDictName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditConformBuilder

enterDictName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditConformBuilder

enterDictVersion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditConformBuilder

enterDictVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditConformBuilder

enterDiffDensityMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffDensityMaxEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityMaxEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffDensityMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffDensityMinEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityMinEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffDensityRms() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffDensityRmsEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDiffDensityRmsEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterDiffraction() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrChi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrChi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrKappa() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrKappa() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrn() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrn() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnAttenuator() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnAttenuator() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnCollection() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterDiffrnDetector() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterDiffrnMeasurement() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnOrient() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnOrientMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnOrientMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnOrientRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnOrientRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnRadiation() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnRadiation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnRadiationWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnRadiationWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnReduction() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterDiffrnRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnReflns() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnReflnsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnReflnsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnReflnsTransfMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnScaleGroup() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnScaleGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnSource() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnStandard() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnStandardRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnStandardRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrnStandards() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDiffrnStandards() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterDiffrPhi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrPsi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterDiffrPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterDihedralAnglesRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterDihedralAnglesRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterDihedralLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDihedralLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDihedralOverallMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterDihedralOverallRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterDihedralThresholdEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDihedralThresholdMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDihedralUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDihedralUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterDimensionHeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterDimensionsCol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterDimensionsRow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterDimensionsSec() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterDimensionWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterDiscussion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterDiscussion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterDisorderAssembly() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterDisorderAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterDisorderGroup() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterDisorderGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterDispersion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionImag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterDispersionImag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionImagCu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionImagMo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionReal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterDispersionReal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionRealCu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionRealMo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDispersionSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterDispersionSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterDisplay() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDisplayColour() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterDisplayColour() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterDisplayColour() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterDisplayX() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterDisplayX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterDisplayY() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterDisplayY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterDist() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterDist() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterDistance() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

enterDistance() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterDistance() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterDistanceConstraintViolationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterDistanceCutoffHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrTypeBuilder

enterDistanceCutoffLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrTypeBuilder

enterDistanceDA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceDASu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceDH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceDHSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceHA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceHASu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterDistanceLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDistanceProbability() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDistanceRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterDistanceRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterDistances() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterDistances() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterDistanceSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterDistanceSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterDistanceThreshold() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterDistanceThreshold() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterDistanceThresholdEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceThresholdMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterDistanceUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterDistanceUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterDistDA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistDA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDistDAEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistDAEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDistDH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistDH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDistDHEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistDHEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneAtomBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterDistHA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistHA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDistHAEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterDistHAEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterDisulfideBondConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterDoi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterDomainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterDomainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

enterDomainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterDomainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterDomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

enterDomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterDomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterDomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsGenBuilder

enterDomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsGenBuilder

enterDoseRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterDpiFreeR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterDResHighFit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResHighRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResHighTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResLimits() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterDResLowFit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResLowRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResLowTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterDResolutionHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterDResolutionHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterDResolutionLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterDResolutionLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterDropletHits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterDSpacing() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterDSpacing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterDtime() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterDtime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterDualTiltAxisRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterDuration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterDyad() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterDyadAxis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterDyadAxis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterEbiCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiCellularLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiEngineered() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiExpressionSystem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiExpressionSystemPlasmid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiOrganelle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiOrganismCommon() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiOrganismScientific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEbiTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEdgeDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterEdgeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterEditAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterEditAtomValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterEditBondValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterEditOp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterEditOp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterElapsedTime() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterElapsedTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterElectronBeamTiltParams() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterElectronCount() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterElectronDose() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterElectronSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterElement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

enterElement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

enterElementSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterElutionBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterElutionProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterEm2dCrystalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEm2dProjectionSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEm3dCrystalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEm3dFitting() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEm3dFittingList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEm3dReconstruction() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmAdmin() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

enterEmAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmAuthorList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmbeddingApplied() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterEmBuffer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmBufferComponent() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmCrystalFormation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmCtfCorrection() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterEmDbReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDbReferenceAuxiliary() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDepui() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDiffraction() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDiffractionShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDiffractionStats() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmDiffractionStatsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterEmEmbedding() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmEntityAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmEntityAssemblyMolwt() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmEntityAssemblyNaturalsource() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmEntityAssemblyRecombinant() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmEulerAngleAssignment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmExperiment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmFiducialMarkers() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmFigureDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmFinalClassification() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmFocusedIonBeam() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmFscCurve() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmGridPretreatment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmHelicalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmHighPressureFreezing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmImageProcessing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterEmImageRecording() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmImageScans() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmImaging() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmImagingOptics() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmInterpretFigure() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmLayerLines() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmLayerLinesDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmMap() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmMapDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmMaskDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmMethodSelection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepositorInfoBuilder

enterEmObsolete() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmParticleSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmpty() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterEmSamplePreparation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSampleSupport() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmShadowing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSingleParticleEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSpecimen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmStaining() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmStartModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmStructureFactors() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmStructureFactorsDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSupersede() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmSupportFilm() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmTomography() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmTomographySpecimen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFiducialMarkersBuilder

enterEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHighPressureFreezingBuilder

enterEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterEmUltramicrotomy() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmVirusEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmVirusNaturalHost() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmVirusShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmVitrification() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEmVolumeSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEnantioexcessBulk() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterEnantioexcessBulkTechnique() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterEnantioexcessCrystal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterEnantioexcessCrystalTechnique() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterEncodedSourceDimensionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterEncodingCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndAuthMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterEndConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterEndDbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterEndDbSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterEndianType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterEndInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterEndMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterEndPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterEndResNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterEndSeq() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterEndYear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterEnergyFilter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterEnergyfilterLower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterEnergyfilterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterEnergyfilterSlitWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterEnergyfilterUpper() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterEnergyWindow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterEnsembleClusteringFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsembleClusteringMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsembleFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsembleFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterEnsembleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterEnsembleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsembleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterEnsembleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterEnsembleId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterEnsembleName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsemblePrecisionValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterEnsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltGenBuilder

enterEnsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsGenBuilder

enterEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

enterEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

enterEntityAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterEntityBranchListNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterEntityBranchListNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterEntityCompNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterEntityCompNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterEntityDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterEntityDescription1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterEntityDescription1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterEntityDescription2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterEntityDescription2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameComBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameSysBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolySeqBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLigandProbeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityAssemblyBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchListBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNonpolyBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaNonstandardBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaTypeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyProteinClassBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityListBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrereleaseSeqBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructEntityInstBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterEntityIdList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterEntityInstId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

enterEntityInstId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAsymGenBuilder

enterEntityInstId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructMsymGenBuilder

enterEntityKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityNameCom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityNameSys() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterEntityPolySeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterEntitySrcGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntitySrcNat() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntityType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmFeatureListBuilder

enterEntry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEntry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmObsoleteBuilder

enterEntry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupersedeBuilder

enterEntryCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

enterEntryFittingList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepositorInfoBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryLinkBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructConfNaBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructFeatureNaBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtlasBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePdbOmitBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlPdBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrDetailsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRefineBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReRefinementBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSummaryFlagsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingAveragingBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingIsomorphousBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublManuscriptInclBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructKeywordsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonDetailsBuilder

enterEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterEntryLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterEnveloped() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterEpsilon() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterEquilibrationBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterErrorDerivationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterEulerAnglesDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterExample() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterExperimental() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterExperimental() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterExperimentalFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterExperimentalMethods() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterExperimentalSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder

enterExperimentalSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFigureDepositorInfoBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterExperimentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterExperimentName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterExperimentor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterExperimentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterExpressionSystemId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterExptId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADClustBuilder

enterExptId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterExptId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterExptl() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterExptl() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterExptl13CShiftTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptl13CShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptl1HShiftTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptl1HShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlAbsorpt() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterExptlCrystal() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterExptlCrystal() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterExptlCrystalAppearance() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterExptlCrystalFace() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterExptlCrystalFace() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterExptlCrystalGrow() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterExptlCrystalGrowComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterExptlDipolarCouplingTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlDipolarCouplingTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlDIsotopeShiftTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlDIsotopeShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlDistanceTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlDistanceTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlJCouplingTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlJCouplingTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlPrep() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterExptlPrep() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterExptlRefinement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterExptlRefinement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterExptlSolution() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterExptlSolution() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterExptlTorsionAnglesTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExptlTorsionAnglesTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterExtensionDictLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder

enterExtensionDictName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder

enterExtensionDictVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder

enterExternalRefAxis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterExternalRefLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterExternalRefSampleGeometry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterExtinctionCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterExtinctionCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterExtinctionCoefSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterExtinctionCoefSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterExtinctionExpression() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterExtinctionExpression() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterExtinctionMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterExtinctionMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterExtraDefn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterExtraDefn() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublManuscriptInclBuilder

enterExtraInfo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterExtraInfo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublManuscriptInclBuilder

enterExtraItem() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterExtraItem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublManuscriptInclBuilder

enterF000() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterF000() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyGroupIndexBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeListBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

enterFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterFCalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFCalcAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFCalcAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFCalcDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterFCalcFormula() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterFCalcPrecision() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterFComplex() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFDoublePrime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructConfNaBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructFeatureNaBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaNonstandardBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructConfNaBuilder

enterFeatureCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructFeatureNaBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmFeatureListBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterFeatureId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterFeatureId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterFeatureId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterFeatureId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterFeatureId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterFeatureId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterFeatureId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterFeatureId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterFeatureId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterFeatureId4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmFeatureListBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterFeatureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterFeatureValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder

enterFiducialMarkers() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterFieldStrength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterFigureCaptions() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterFigureCaptions() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterFile() - Static method in class org.rcsb.cif.CifBuilder

Start a new file without providing any schema.

enterFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFscCurveBuilder

enterFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmInterpretFigureBuilder

enterFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesBuilder

enterFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsBuilder

enterFile(SchemaProvider<F, B>) - Static method in class org.rcsb.cif.CifBuilder

Start a new file with a specified schema.

enterFileContentType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterFileFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder

enterFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineAuxFileBuilder

enterFilePath() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterFileSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterFileSizeBytes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterFileType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterFileType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineAuxFileBuilder

enterFilmMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterFilmOrDetectorModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterFilterEdge() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterFilterEdge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterFilterSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterFinalSolutionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

enterFinalThickness() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterFinalThickness() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterFittingAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterFittingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterFittingMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterFittingMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterFittingMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterFittingMethodCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterFittingMethodCitationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterFittingParticleType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterFittingSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterFittingState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterFittingState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterFlagId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSummaryFlagsBuilder

enterFlagValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSummaryFlagsBuilder

enterFloatColumn(String) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

enterFloatColumn(String) - Method in interface org.rcsb.cif.model.CategoryBuilder

Descend 1 level and enter a new FloatColumn.

enterFlowRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterFlowRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterFMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterFMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterFMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFMeasSigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFMeasSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFMeasSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterFMeasSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFMeasSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFocalSpotSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterFom() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFOM() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterFOM() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterFOMAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterFOMAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterFOMCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterFOMCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterFootnote() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterFootnote() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

enterFootnoteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFormalCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterFormalCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterFormat() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

enterFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

enterFormFactorTable() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFormul() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterFormula() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterFormulaUnitsZ() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterFormulaUnitsZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterFormulaWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterFormulaWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterFormulaWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterForwardPrimerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterFourierSpaceCoverage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterFourierSpaceCoverage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterFpRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterFpRateError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterFPrime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterFractNAStrandPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStrandInfoBuilder

enterFractTransfMatrix11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransformAxes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfVector1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfVector2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractTransfVector3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterFractTransfVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterFractX() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractXEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractXSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterFractY() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractYEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractYSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractZ() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractZEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFractZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterFractZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterFractZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterFractZSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterFrameHits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterFramesFailedIndex() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterFramesIndexed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterFramesPerImage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterFramesTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterFreeRErrorNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRFactor4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRFactorNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRVal4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRValNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRValTestSetCt4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRValTestSetCtNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRValTestSetSizePerc4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeRValTestSetSizePercNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterFreeSetCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterFriedelCoverage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterFriedelCoverage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterFriedelFractionFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterFriedelFractionMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterFromAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterFromAtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterFromCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterFromCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterFromCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterFromLeavingAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterFromListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterFscType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterFSquaredCalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFSquaredCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFSquaredMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFSquaredMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFSquaredMeasSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFSquaredSigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterFSquaredSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterFullMatrices() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterFullNameOfCenter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSGProjectBuilder

enterFunction() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterFunction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructBiolFuncBuilder

enterFundingOrganization() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

enterGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterGammaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellAngleBuilder

enterGammaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterGammaTolerance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterGeneInsertMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterGeneral() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalAppearanceBuilder

enterGeneral() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterGeneSrcCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcDevStage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcGene() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterGeneSrcGenus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterGeneSrcScientificName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterGeneSrcSpecies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGeneSrcTissueFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterGenus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterGeom() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGeomAngle() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeomAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGeomBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeomBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGeomContact() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeomContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGeomHbond() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeomHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGeomTorsion() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterGeomTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterGoId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterGoodnessOfFitAllSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterGoodnessOfFitAllSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterGoodnessOfFitGtSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterGoodnessOfFitGtSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterGrantNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

enterGreen() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

enterGridMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterGridMeshSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterGridType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder

enterGroupCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsScaleBuilder

enterGroupCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsScaleBuilder

enterGroupConditionality() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterGroupConditionality() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterGroupConditionality() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterGroupConditionality() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterGroupDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupBuilder

enterGroupEnumerationType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterGroupFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterGroupFileTimestamp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupLinkBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupLinkBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupBuilder

enterGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterGroupName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterGroupPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterGroupPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterGroupPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterGroupTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupBuilder

enterGroupType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupBuilder

enterH_MNotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryBuilder

enterH_MNotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

enterHaAmpl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterHand() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterHardware() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterHarmonicForceConstant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterHarvestingDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHasAcceptedTermsAndConditions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasCyclicSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasHelicalSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasLigandOfInterest() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterHasMutation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder

enterHasNcsData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasPointSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasSasData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHasViewedValidationReport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterHbondType12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterHbondType28() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterHeaderReleaseDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterHelicalRise() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterHelicalRise() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterHelicalRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterHelicalTwist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterHetero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolySeqBuilder

enterHetero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterHetero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchListBuilder

enterHetero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterHetero() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterHetgroupChemicalName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterHetgroupName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterHiAngFoxC0() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterHiAngFoxC1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterHiAngFoxC2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterHiAngFoxC3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterHiAngFoxCoeffs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterHighPressureFreezing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterHighResolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterHighResolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterHkl() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterHLAIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterHLBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterHLCIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterHLDIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterHoldForPublication() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterHostOrgCellLine() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterHostOrgCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgCultureCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterHostOrgDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgGene() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterHostOrgGenus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterHostOrgNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgSpecies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgTaxId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgVariant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterHostOrgVectorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterHue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

enterHue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalAppearanceBuilder

enterHue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterHumidity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterHydrogenAtomsYN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

enterHydrogenBondConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterIAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterIAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterIAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIceRing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterICSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterICSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterIctvdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationEditorBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalIndexBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceRefBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesAltEnsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesFootnoteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBCaveatBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRemarkBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEmbeddingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFiducialMarkersBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFigureDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFscCurveBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHighPressureFreezingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageProcessingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmInterpretFigureBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmObsoleteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupersedeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryLinkBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentativeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRemarkBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyGroupIndexBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHybridBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxInhibitorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxIonInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStrandInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbCompndBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbSourceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxProteinInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRobotSystemBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSGProjectBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructBiolFuncBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructEntityInstBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTrnaInfoBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADClustBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupSymopBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfTypeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnTypeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryEquivBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceRefBuilder

enterIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterIdentifierInchi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterIdentifierInchiKey() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterIdentifierInchiVersion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditAuthorBuilder

enterIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationAuthorBuilder

enterIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterIdIucr() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterIdIucr() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterIdIucr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

enterIdOrcid() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterIdOrcid() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterIhm2demClassAverageFitting() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhm2demClassAverageRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhm3demRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmChemicalComponentDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmCrossLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmCrossLinkPseudoSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmCrossLinkRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmCrossLinkResult() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmCrossLinkResultParameters() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDatasetExternalReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDatasetGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDatasetGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDatasetList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDatasetRelatedDbReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDataTransformation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDerivedAngleRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDerivedDihedralRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmDerivedDistanceRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmEnsembleInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmEnsembleSubSample() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmEntityPolySegment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmEprRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmExternalFiles() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmExternalReferenceInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmFeatureList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGaussianObjEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGaussianObjSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectAxis() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectCenter() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectDistanceRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectHalfTorus() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectSphere() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectTorus() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmGeometricObjectTransformation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmHdxRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmHydroxylRadicalFpRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmInterfaceResidueFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmLigandProbe() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmLocalizationDensityFiles() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterIhmModelingPostProcess() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelingProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelingProtocolDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelRepresentation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelRepresentationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmModelRepresentative() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmMultiStateModelGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmMultiStateModeling() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmNonPolyFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmOrderedEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPolyAtomFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPolyProbeConjugate() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPolyProbePosition() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPolyResidueFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPredictedContactRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmProbeList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPseudoSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmPseudoSiteFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmRelatedDatasets() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmResiduesNotModeled() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmSasRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmSphereObjSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStartingComparativeModels() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStartingComputationalModels() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStartingModelCoord() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStartingModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStartingModelSeqDif() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStructAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStructAssemblyClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStructAssemblyClassLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterIhmStructAssemblyDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterILabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterILabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterILabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterILabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterILabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterILabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterILabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterILabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterILabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIlluminationMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHelicalEntityBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterImageProcessingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterImageRecordingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageProcessingBuilder

enterImageRecordingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterImageResolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterImageSegmentFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterImagingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionBuilder

enterImagingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterImagingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterImagingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterImagingId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographyBuilder

enterImproperTorsionAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterImproperTorsionAngleRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterImproperTorsionAngleRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterInchi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterInchiKey() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterInclination() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIncludeStatus() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIncludeStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIndex() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIndexH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIndexK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIndexL() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterInDictionaryFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterIndirectShiftRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterInducer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterInducerConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterInductionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterInductionTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterInductionTimepoint() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterINet() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnScaleGroupBuilder

enterINet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnScaleGroupBuilder

enterInfo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterInfo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclExtraBuilder

enterInhomogeneity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterInhomogeneity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterInitialOfCenter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSGProjectBuilder

enterInitialThickness() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterInjectorDiameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterInjectorNozzle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterInjectorPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterInjectorTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterInPolymerFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterInsertCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterInsertCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterInsilicoModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterInstanceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder

enterInstanceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeBuilder

enterInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmHighPressureFreezingBuilder

enterInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterIntColumn(String) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

enterIntColumn(String) - Method in interface org.rcsb.cif.model.CategoryBuilder

Descend 1 level and enter a new IntColumn.

enterIntensity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalAppearanceBuilder

enterIntensity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterIntensityCalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIntensityCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIntensityMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIntensityMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIntensityMeasSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIntensityNet() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIntensityNet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterIntensityNetSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIntensitySigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIntensitySigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterIntensitySigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterIntensitySigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterIntensityU() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterIntensityU() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterInterfaceResidueFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterInternalDepositionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterInternalVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterIntervalCount() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterIntervalCount() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterIntervalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterIntervalTime() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterIntervalTime() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterIntervalTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterIntroduction() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterIntroduction() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterIntTablesNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryBuilder

enterIntTablesNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterIon() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterIonicStrength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterIonicStrengthErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterIonicStrengthUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterIOverSigIDiff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterIOverSigIMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterIOverSigIResh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterIOverSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterIPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterIPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterIprId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterIsGrantFunded() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterIsLigandProcessingComplete() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterIsoBValueType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterIsotopicLabeling() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterIsotopicLabeling() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterIsSasDeposited() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterISSNCodeType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterISSNCodeValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterIssue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterIssue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterISymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterISymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterISymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterITCoordinateSystemCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterItem() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

enterItem() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclExtraBuilder

enterItem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder

enterItemName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

enterItemViewAllowAlternateValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

enterItemViewMandatoryCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

enterItemViewName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

enterIterativeRelaxationMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterIterativeRelaxationMatrixVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterITNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterITNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

enterIupac() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterIupac() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterJAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJetDiameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterJLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJournal() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublRequestedBuilder

enterJournal() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterJournalAbbrev() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalAbbrev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalASTM() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterJournalASTM() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterJournalCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterJournalCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterJournalCSD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterJournalDate() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterJournalFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalFull() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalIdASTM() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalIdASTM() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalIdCSD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalIdCSD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalIdISSN() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalIdISSN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalIndex() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterJournalIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterJournalIssue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalIssue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJournalTecheditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterJournalVolume() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterJournalVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterJPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterJSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterJSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterKey() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterKey() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationAuthorBuilder

enterKey() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupGeneratorBuilder

enterKeywords() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterKeywords() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterKSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterL11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterL33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterLabel() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterLabel() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabel() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterLabel() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterLabelAltId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterLabelAltId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAltId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterLabelAltIdU() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAltIdV() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAltIdW() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequencePatternBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelAtomIdU() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAtomIdV() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelAtomIdW() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelCompId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelCompId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelComponent0() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent5() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelComponent6() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterLabelEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterLabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterLabelSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterLanguage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterLanguage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterLanguage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterLanguage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterLanguage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterLastUpdate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterLatticesIndexed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterLaueClass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterLaueMeasuredFractionFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLaueMeasuredFractionMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterLegacyAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterLengthA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterLengthA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterLengthAEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthAEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthASu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterLengthB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterLengthBEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthBEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthBSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterLengthC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterLengthCEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthCEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterLengthCSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterLengthNeutron() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterLengthNeutron() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterLetter() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

enterLigationEnzymes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterLimitCol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterLimitHMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitHMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitHMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitHMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitHMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitHMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitHMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitHMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitKMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitKMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitKMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitKMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitKMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitKMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitKMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitKMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitLMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitLMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitLMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitLMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitLMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitLMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitLMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterLimitLMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterLimitMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterLimitMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterLimitRow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterLimitSec() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterLink() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder

enterLinkClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterLinkClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityListBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder

enterLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterLinkerChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterLinkerFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterLinkerFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterLinkerType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterLinkFromEntityType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterLinkId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterLinkToCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterLinkToEntityType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterLinkType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder

enterLipidMixture() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterLipidProteinRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder

enterListId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterListId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterLLDF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterLLGainRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterLLGainTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterLogPf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterLogPfError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterLowerLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder

enterLowResolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterLpFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterLsAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsAbsStructureDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsAbsStructureFlack() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsAbsStructureFlackEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsAbsStructureFlackEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsAbsStructureRogers() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsAbsStructureRogersEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsAbsStructureRogersEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsDResHigh() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterLsDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsDResHighSf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterLsDResLow() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsDResLowSf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterLsExtinctionCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsExtinctionCoef() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsExtinctionCoefEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsExtinctionCoefEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsExtinctionExpression() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsExtinctionExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsExtinctionMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsExtinctionMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitAllEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitAllEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitGtEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitObsEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitObsEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsHydrogenTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsMatrixType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsMatrixType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberConstraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsNumberConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberParameters() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsNumberParameters() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberReflnsAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsNumberRestraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsNumberRestraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsPercentReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRedundancyReflnsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRestrainedSAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRestrainedSAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRestrainedSObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRestrainedSObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRFactorGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorRAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorRFreeError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorRFreeErrorDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterLsRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRFsqdFactorObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRFsqdFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsRIFactorObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsRIFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverEsdMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverEsdMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverEsdMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverEsdMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverSuMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverSuMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsStructureFactorCoef() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWeightingDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsWeightingDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWeightingScheme() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsWeightingScheme() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsWRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWRFactorObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterLsWRFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLsWRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterLuzzatiCoordinateErrorFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiCoordinateErrorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiDResLowFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiDResLowObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiSigmaAFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiSigmaAFreeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiSigmaAObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterLuzzatiSigmaAObsDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterMacromoleculeDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterMagnetizationLinkageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterMagnificationCalibration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterMajorRadiusR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

enterMajorRevision() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterMajorVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterMake() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterMake() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterManufacturer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFiducialMarkersBuilder

enterManufacturer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterManufacturer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRobotSystemBuilder

enterManuscriptCreation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterManuscriptCreation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterManuscriptProcessed() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterManuscriptProcessed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterManuscriptText() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterManuscriptText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterMapHoldDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterMapReleaseDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterMapSegmentFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterMapType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterMarker() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterMaskType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterMat11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMat33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterMat33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMat33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnAttenuatorBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnAttenuatorBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEmbeddingBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

enterMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

enterMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterMatrixB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterMatrixFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterMatrixType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterMatrixType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterMatrixU() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterMatthewCoeff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMaximumDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterMaximumLowerDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterMaximumTorsionAngleConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterMaximumUpperDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterMaxMeanCrossSectionalRadiiGyration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMaxMeanCrossSectionalRadiiGyrationEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMaxtorsion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterMDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterMDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterMeanBAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterMeanBAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterMeanBBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterMeanBMain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterMeanBPhos() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterMeanBSide() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterMeanBSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterMeanCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterMeanCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterMeanCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterMeanCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterMeanCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterMeanCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterMeanE21Abs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMeanFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterMeanFSquareOverMeanF2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMeanFSquareOverMeanF2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterMeanGuinerRadius() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMeanGuinerRadiusEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMeanI2OverMeanISquare() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMeanI2OverMeanISquare() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterMeanIOverSigIAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSigIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSigIGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSigIGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSigIObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSigIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSuIAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverSuIGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverUIAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverUIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterMeanIOverUIGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterMeanIOverUIGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterMeanPathLengthTbar() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterMeanPathLengthTbar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterMeanPhase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterMeasF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsScaleBuilder

enterMeasF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsScaleBuilder

enterMeasFSquared() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsScaleBuilder

enterMeasFSquared() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsScaleBuilder

enterMeasIntensity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsScaleBuilder

enterMeasIntensity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsScaleBuilder

enterMeasuredFractionThetaFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasuredFractionThetaMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementDeviceClass() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementDeviceDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementDeviceMake() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMeasurementSpecimenSupport() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMedianDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterMeltingPoint() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterMeltingPoint() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterMeltingPointGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterMeltingPointGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterMeltingPointLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterMeltingPointLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterMergedFail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterMergeOutputModelFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterMergePriorModelFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterMergeReplaceModelFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterMessage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterMessageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterMessageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterMessageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterMessageSubject() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterMessageText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterMessageType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterMessageType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterMetadataReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

enterMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRefineBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingAveragingBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingIsomorphousBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterMethodDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterMethodDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

enterMethodDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

enterMethodDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterMethodRef() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterMethodRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterMethodsDevelopmentCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterMethodTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterMetricTensor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterMFo_DFc_3sigmaNegative() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMFo_DFc_3sigmaPositive() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMFo_DFc_6sigmaNegative() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMFo_DFc_6sigmaPositive() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMicroscopeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterMicroscopeModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterMicValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterMinMeanCrossSectionalRadiiGyration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMinMeanCrossSectionalRadiiGyrationEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterMinorRadiusR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

enterMinorRevision() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterMinorVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterModel() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRobotSystemBuilder

enterModelCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterModelCartnXEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterModelCartnYEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterModelCartnZEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterModelErf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterModelGranularity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterModelGranularity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterModelGranularity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterModelGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterModelGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterModelGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentativeBuilder

enterModelGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelGroupLinkBuilder

enterModelGroupIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterModelGroupIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupLinkBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentativeBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterModelMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterModelName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

enterModelNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterModelNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterModelObjectCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterModelObjectPrimitive() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterModelSite() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterModelSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterModification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectModificationBuilder

enterModificationFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterModified() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectTypeBuilder

enterModifiedDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterModResChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterMods() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterModType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterMoiety() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterMoiety() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterMolCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterMolecularDescriptionFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepositorInfoBuilder

enterMolecularGraphics() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterMolecularGraphics() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterMoleIndex() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterMolWtExp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterMolWtMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterMolWtTheo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolySeqBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterMonNstdClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterMonNstdDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterMonNstdFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterMonNstdParent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterMonNstdParentCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterMonochromator() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterMonochromator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterMosaicity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterMotionControl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterMsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructMsymGenBuilder

enterMtrixNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

enterMultiplicity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterMultiplicityOfInfection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterMultiScaleFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterMultiStateFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterMutantFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterMutationFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterMutResChemCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterN1C2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterN1C6() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterN9C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterN9C8() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNAAlpha_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNABeta_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNAChi_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNADelta_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNAEpsilon_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNAGamma_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationEditorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationEditorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferComponentBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameComBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameSysBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNonpolyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxInhibitorInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxIonInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxProteinInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTrnaInfoBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

enterName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterNameCommon() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterNameCommon() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterNameDepositor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterNameFirst() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterNameFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterNameFull() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterNameH_MAlt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameH_MAlt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

enterNameH_MAltDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameH_MFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameH_MRef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameHall() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameHall() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

enterNameLast() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterNameMi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterNameMineral() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterNameMineral() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterNameSalutation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterNameSchoenflies() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterNameStructureType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterNameStructureType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterNameSystematic() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterNameSystematic() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterNameType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameBuilder

enterNameType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder

enterNAOther_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNASugarPuckerConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNativeSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterNativeSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterNBS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterNBS() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterNCA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterNCA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterNcbiTaxid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceAnnotationBuilder

enterNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

enterNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterNcsGroupNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterNcsModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterNdbOriginalNdbCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterNdbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterNdbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterNdbStructConfNa() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterNdbStructFeatureNa() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterNdbStructNaBasePair() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterNdbStructNaBasePairStep() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterNdbTid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterNdbTokenType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectTypeBuilder

enterNeighborCompId3prime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNeighborCompId5prime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNeighborLigandDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterNeighborMacromoleculeDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterNextC3O3PO5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextC4C3O3P() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextC4O4C1N19() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextC5C4C3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextO3PO5C5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextO4C1N19C24() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextO5C5C4C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextPO5C5C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterNextStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterNH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterNH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterNitrogenShiftsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterNOEConstraintsTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEInterentityTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEInterprotonDistanceEvaluation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEIntraresidueTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOELongRangeTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEMediumRangeTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEMotionalAveragingCorrection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOEPseudoatomCorrections() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNOESequentialTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterNominalCs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterNominalDefocusMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterNominalDefocusMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterNominalMagnification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterNominalPixelSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterNon_bondedInterConfDbPotentialTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedInterRadiusOfGyrationTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedInterRadiusOfGyrationTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedInterVanDerWaalsTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedInterVanDerWaalsTermType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedInterVanDerWaalsTermUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

enterNon_bondedRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterNonpolymerDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterNonpolyResNum1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterNonpolyResNum2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterNotes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterNotes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterNotes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterNRPFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

enterNstdChirality() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterNstdLinkage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterNstdMonomer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterNSubunitsDivisor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterNSubunitsDivisor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterNTerminalSeqTag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterNu0() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterNu1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterNu2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterNu3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterNu4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolySeqBuilder

enterNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchListBuilder

enterNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterNumAngles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumAngles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterNumAnglesBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumAnglesPhosphate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumAnglesSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsClassBuilder

enterNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsClassBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

enterNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterNumberAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterNumberAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterNumberAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneBuilder

enterNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneBuilder

enterNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

enterNumberAtomsSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberAtomsTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberClust() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterNumberConstraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterNumberConstraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterNumberDigitalImages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterNumberDisorderedResidues() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterNumberGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterNumberGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterNumberGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterNumberGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterNumberInCell() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterNumberInCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterNumberMarkedReject() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterNumberMeasuredAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberMeasuredAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberMeasuredGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberMeasuredGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberMeasuredObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberMeasuredObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterNumberObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterNumberObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterNumberOfCopies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterNumberOfGaussians() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterNumberOfMonomers() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterNumberOfOperations() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterNumberOfOperations() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterNumberOfProjections() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterNumberOfSites() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterNumberOfSites() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterNumberOfSpectralDimensions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterNumberParameters() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterNumberParameters() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterNumberPossible() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberPossible() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberPossibleAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberRawMicrographs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterNumberReflns() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterNumberReflns() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterNumberReflnsGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterNumberReflnsGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterNumberReflnsObs4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterNumberReflnsObsNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterNumberRestraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterNumberRestraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterNumberSet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADClustBuilder

enterNumberStrands() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetBuilder

enterNumberTerms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

enterNumberTotal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterNumberTotal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterNumberTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterNumberUniqueAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberUniqueAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberUniqueGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberUniqueGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumberUniqueObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterNumberUniqueObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterNumBonds() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumBonds() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterNumBondsBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumBondsPhosphate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumBondsSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterNumbPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxIonInfoBuilder

enterNumbPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventInfoBuilder

enterNumClassAverages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterNumClasses() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterNumComponents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAssemblyBuilder

enterNumConect() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumConformersCalculated() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterNumConformersSubmitted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterNumCoord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumCopies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityAssemblyBuilder

enterNumDiffractionImages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterNumEnsembleModels() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterNumEnsembleModelsDeposited() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterNumFtnote() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumGridsImaged() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterNumHelix() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumHet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumIntensitiesMeasured() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterNumModels() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterNumModels() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterNumModelsBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterNumModelsBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterNumModelsDeposited() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

enterNumModelsEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterNumModelsEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterNumOfNAStrandsPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStrandInfoBuilder

enterNumOfNAStrandsPerBiolUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStrandInfoBuilder

enterNumOfWholeMolecule() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

enterNumParticles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterNumParticles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterNumParticlesSelected() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

enterNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxInhibitorInfoBuilder

enterNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxProteinInfoBuilder

enterNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTrnaInfoBuilder

enterNumRealImages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageRecordingBuilder

enterNumRemark() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumSeqres() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumSheet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumSteps() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolBuilder

enterNumStructureFactors() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterNumStructureFactors() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterNumTer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumTimeFrames() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterNumTomograms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterNumTrans() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumTurn() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

enterNumVolumesExtracted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterO1pPO2p() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO3C3C2O2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO3P() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO3PO5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO3PO5C5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1C2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1C2C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1N19() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1N19C24() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C1N19C68() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO4C4C3O3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO5C5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO5C5C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO5C5C4C3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterO5C5C4O4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterObjectCharacteristic() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterObjectDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectListBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectListBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder

enterObjectId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

enterObjectName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectListBuilder

enterObjectRadius() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterObjectType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectListBuilder

enterObserved() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterObservedCriterion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterObservedCriterion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionFMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionFMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionIMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionIMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionSigmaF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedCriterionSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterObservedStatus() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterObsoletedDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterObsoleteInstructions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterOccupancyAnom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterOccupancyAnomSu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterOccupancyEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterOccupancyEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterOccupancyEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterOccupancyFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterOccupancyFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterOccupancyIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterOccupancyIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterOccupancyIsoSu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

enterOccupancyMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterOccupancyMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOccupancyMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterOccupancyMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterOccupancyMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterOccupancyMeanMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterOccupancyMeanPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterOccupancyMeanSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterOccupancyMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterOccupancyMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOccupancyOutliersHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterOccupancyOutliersLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterOccupancySu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterOccupancySumHydrogen() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterOccupancySumNonHydrogen() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterOD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterOdRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterOffset() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

enterOffset() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

enterOligomericCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

enterOligomericCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterOligomericDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterOligomericDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

enterOligomericDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterOmega() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterOmega() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterOmega() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder

enterOneLetterCodeMod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder

enterOneLetterCodes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

enterOpening() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterOperationDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterOperationXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterOperationXyz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupSymopBuilder

enterOperator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterOperExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

enterOperExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterOperExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAsymGenBuilder

enterOperExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructMsymGenBuilder

enterOperId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder

enterOperId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsGenBuilder

enterOpticalRotation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterOpticalRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterOrderedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterOrderedFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationAuthorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationEditorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationAuthorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationEditorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAuthorListBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditAuthorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

enterOrdinalId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterOrgan() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterOrganelle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterOrganisation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterOrganism() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterOrganism() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterOrganism() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

enterOrganismCommonName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterOrganismScientific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterOrganismScientific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterOrganizationType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterOriginCol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterOriginRow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterOriginSec() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterOriginX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterOriginY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterOriginZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterOrigx11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigx33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigxVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigxVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrigxVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterOrthogonalMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterOrthogonalTiltAngle1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterOrthogonalTiltAngle2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterOrthogonalTiltNumImages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterOs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterOscillationEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterOscillationRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterOscillationStart() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterOsVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterOther() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterOtherShiftsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterOverallBValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterOverallFOMFreeRSet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOverallFOMWorkRSet() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOverallPhaseError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterOverallPhaseResidual() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterOverallScore() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterOverallSUB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOverallSUML() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOverallSURCruickshankDPI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOverallSURFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterOxidationNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterOxidationNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterP() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterPacking() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterPackingType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterPadilla_YeatesL2Mean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPadilla_YeatesL2MeanPointless() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPadilla_YeatesLMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPageFirst() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterPageFirst() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPageFirst() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterPageFirst() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterPageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtlasBuilder

enterPageLast() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterPageLast() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPageLast() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterPageLast() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterPageName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtlasBuilder

enterPairName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterPairNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterPaperCategory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPaperCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterPaperDoi() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterParameter() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterParamFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxXplorFileBuilder

enterParent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingIsomorphousBuilder

enterParentAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

enterParentCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder

enterParentCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterParentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterParentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder

enterParentMessageId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterParentMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterParentResidue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterPartialBValueCorrectionAttempted() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPartialBValueCorrectionSuccess() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPartialCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPartition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterPartitionNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterPatternCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequencePatternBuilder

enterPattersonNameH_M() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterPDB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterPDB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterPdbAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterPdbChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterPdbChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterPdbChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterPdbChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceAnnotationBuilder

enterPdbChainId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder

enterPdbChainResidueRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterPdbDateOfAuthorApproval() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPdbEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingListBuilder

enterPdbFormatCompatible() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPdbid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPdbid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterPdbid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapmanBuilder

enterPdbid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

enterPdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterPdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

enterPdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterPdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterPdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterPdbIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

enterPdbIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

enterPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterPDBInsCode3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterPdbInsertionCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterPdbModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterPdbMolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterPdbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterPdbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterPdbMonId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterPdbResidueName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterPdbResidueNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

enterPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

enterPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

enterPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterPdbtype() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterPdbxAfterBeginResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxAfterEndResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxAggregationState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterPdbxAlign() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxAlign() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPdbxAlignBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterPdbxAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterPdbxAltAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxAltCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterPdbxAmbiguousFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxAnalyzer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPdbxAnomalousDiff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxAnomalousDiffSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxAnomDifference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxAnomDifferenceSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxAnomScatMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxAntibodyIsotype() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterPdbxAromaticFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxAromaticFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterPdbxAssemblyMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterPdbxAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxAtcc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxAtlas() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAtomGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAtomSiteAnisoTls() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPdbxAtomSitePDBInsCode3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterPdbxAtomSitePDBInsCode3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPdbxAtomSitePDBInsCode4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPdbxAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterPdbxAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditConformExtension() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditRevisionCategory() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditRevisionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditRevisionGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditRevisionHistory() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditRevisionItem() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuditSupport() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxAuthCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterPdbxAuthInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxAuthSeqAlignBeg() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxAuthSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxAverageFscFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxAverageFscOverall() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxAverageFscWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxBath() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxBeforeBeginResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxBeforeEndResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterPdbxBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterPdbxBIsoMeanLigand() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxBIsoMeanSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxBlankPDBChainidFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxBondDistanceLimits() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxBranchScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxBuffer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxBufferComponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxBuildSelfReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxCasnum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxCASPFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxCCHalf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxCCHalf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxCCStar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxCCStar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxCellLine() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxCellularLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxChemCompAtomEdit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompAtomFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompAtomRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompBondEdit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompImport() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompInstanceDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompModelReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompNonstandard() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompSubcomponentEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompSubcomponentStructConn() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompSynonyms() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChemCompUploadDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxClass1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxClass2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxCodeNDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterPdbxCodePDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterPdbxCollectionDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterPdbxCollectionTimeTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterPdbxColorBlue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxColorGreen() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxColorRed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxColumninfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxComponentAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxComponentCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxComponentEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxComponentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxComponentId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterPdbxComponentNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxCompType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxConcFinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxConnect() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxConnectAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxConnectModification() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxConnectType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxConstruct() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxConstructFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxCoord() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxCoordinateModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxCosPhaseCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxCrystalAlignment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxCrystalDiffrnLifetime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalDiffrnLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalDirection1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalDirection2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalDirection3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalImage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalImageFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCrystalImageUrl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxCTerminalSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxCultureCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxDatabaseIdDOI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterPdbxDatabaseIdPubMed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterPdbxDatabaseMessage() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabasePDBMaster() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabasePDBObsSpr() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabasePdbOmit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabaseProc() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabaseRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabaseRemark() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabaseStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDatabaseStatusHistory() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDataCutoffHighAbsF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxDataCutoffHighRmsAbsF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxDataCutoffLowAbsF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxDataProcessingCell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDataProcessingDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDataProcessingReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDataProcessingStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDataReductionDs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterPdbxDataReductionIi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterPdbxDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterPdbxDbAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterPdbxDbAccession() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxDbAlignBegInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxDbAlignEndInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxDbIsoform() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterPdbxDbref() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccDensity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccDensityCorr() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccGeometry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccMap() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccMapman() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccRsccMapman() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDccRsccMapmanOverall() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDELFWT() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxDELPHWT() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxDensityCorrelation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxDepositGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepositGroupIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepositionMessageFileReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepositionMessageInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiEntityFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiEntityStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiEntryDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiUpload() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDepuiValidationStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterPdbxDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructKeywordsBuilder

enterPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxDiffrnProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxDiffrnReflnsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDistantSolventAtoms() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDistValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPdbxDistValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxDOI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryBuilder

enterPdbxDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDomainRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxDOpt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterPdbxDResHighOpt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterPdbxDResLowOpt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxDResOptMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxDrugInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxEc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterPdbxEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterPdbxEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomBuilder

enterPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterPdbxEntitiesPerBiologicalUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxEntityAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityBranch() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityBranchDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityBranchLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityBranchList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityFuncBindMode() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityFuncEnzyme() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityFuncOther() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityFuncRegulatory() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityFuncStructural() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityInstanceFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityName() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityNameInstance() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityNameTaxonomy() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityNameTaxonomyTree() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityPolyCompLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityPolyDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityPolyNaNonstandard() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityPolyNaType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityPolyProteinClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntityProdProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenCharacter() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenChrom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenClone() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenCloneLigation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenCloneRecombination() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenExpress() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenExpressTimepoint() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenFract() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenLysis() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenProdDigest() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenProdOther() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenProdOtherParameter() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenProdPcr() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenProteolysis() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenPure() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcGenRefold() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntitySrcSyn() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEntryDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxEvidenceCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxExplicitLinkingFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxExptlCrystalCryoTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxExptlCrystalGrowComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxExptlCrystalGrowSol() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxExptlPd() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFamilyGroupIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFamilyPrdAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFCalcPartSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFCalcWithSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFDoublePrimeRefined() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterPdbxFeatureAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFeatureDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFeatureEntry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFeatureMonomer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFeatureSequenceRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxFiberCoordinate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFiberFMeasAu() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFiberLayer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFMinus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFMinusSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxFom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxFormalCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxFormalCharge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxFormulaWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterPdbxFormulaWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxFormulaWeightExptl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxFormulaWeightExptlMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxFormulaWeightMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterPdbxFormulaWeightMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxFPlus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFPlusSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxFPrimeRefined() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterPdbxFractionPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxFragment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxFragment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterPdbxFragment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxFramesTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterPdbxFrequency() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterPdbxFscFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxFscWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxFullSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterPdbxFullSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxFWT() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxGeneSrcAtcc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcCellLine() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcCellularLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcCultureCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcFragment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcGene() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcOrgan() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcOrganelle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcPlasmid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcPlasmidName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcScientificName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGeneSrcVariant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxGroupNDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxHelicalSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxHelicalSymmetryDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxHLAIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxHLBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxHLCIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxHLDIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxHostOrgAtcc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgCellLine() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgCellularLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgCultureCollection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgGene() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgOrgan() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgOrganelle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgTissueFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgVariant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgVector() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHostOrgVectorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxHybrid() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxIdealCoordinatesDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxIdealCoordinatesMissingFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxIMinus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxIMinusSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxInhibitorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxInitialDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxIonInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxIPlus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxIPlusSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxIsotropicThermalModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructKeywordsBuilder

enterPdbxLabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelCompId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxLabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxLabelSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxLeavingAtomFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxLeavingAtomFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxLinkedEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxLinkedEntityInstanceList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxLinkedEntityLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxLinkedEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxLoc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxLsCrossValidMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxLsSigmaF() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxLsSigmaFsqd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxLsSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxLuzzatiDResHighObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterPdbxMethodToDetermineStruct() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxMissingAtomNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxMissingAtomPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxMissingNumBeginOfChainInSeqres() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxMissingNumBeginOfChainNotInSeqres() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxMissingNumEndOfChainNotInSeqres() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxMissingResidueList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxModelCartnXIdeal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxModelCartnYIdeal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxModelCartnZIdeal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxModelCoordinatesDbCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxModelCoordinatesDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxModelCoordinatesMissingFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxModelTypeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxModification() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxModificationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxModified() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxModifiedDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxMolecule() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxMoleculeFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxMoleculeFeaturesDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxMonochromaticOrLaueML() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxMosaicity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxMosaicityEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxMutation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxMutation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterPdbxNaStrandInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNaStructKeywds() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxNcsDomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxNElectrons() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxNetIOverAvSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxNetIOverSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxNetIOverSigmaIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxNetIOverSigmaIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxNewAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxNewPdbAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxNmrAssignedChemShiftList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrChemShiftExperiment() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrChemShiftRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrChemShiftReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrChemShiftSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrComputing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrConstraintFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrEnsembleRms() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrExptl() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrExptlSample() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrExptlSampleConditions() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrForceConstants() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrRepresentative() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSampleDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSoftwareTask() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSpectralDim() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSpectralPeakList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSpectralPeakSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSpectrometer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrSystematicChemShiftOffset() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNmrUpload() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNonpolyScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNonstandardList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxNotInAsym() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxNotInAsym() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxNscnum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxNTerminalSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxNumberAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxNumberAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxNumberAtomsCarb() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsLigand() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsLipid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsNucleicAcid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsProtein() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberAtomsTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberDataSets() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxNumberDerivatives() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterPdbxNumberMeasuredAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxNumberObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxNumberOfMolecules() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxNumberResiduesTotal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxNumberSubcomponents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxNumRes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterPdbxNumResidues() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

enterPdbxObservedCriterion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxOmegaAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditAuthorBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxOrgan() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxOrganelle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxOrganismScientific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxOverallESUB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallESUML() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallESUR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallESURFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallPhaseError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallSURBlowDPI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallSURFreeBlowDPI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxOverallSURFreeCruickshankDPI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxParentBiolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

enterPdbxParentEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxPDBAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBAtomName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPdbCompnd() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPDBHelixClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterPdbxPDBHelixId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterPdbxPDBHelixLength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

enterPdbxPDBId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxPDBId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPdbIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxPDBIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxPdbInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

enterPdbxPDBOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterPdbxPDBResidueName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBResidueName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPDBResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBResidueNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPdbSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPdbStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxPDBStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterPdbxPDBStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxPdFsqrdRFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdLsMatrixBandWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdMarquardtCorrelationCoeff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdMeasNumberOfPoints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdNumberOfPoints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdNumberOfPowderPatterns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdProcLsProfRFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPdProcLsProfWRFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxPhaseCalcPartSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxPhaseCalcWithSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxPhaseCycle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxPhaseError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxPhasingDm() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingDmShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingMADSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingMADSetShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingMADSetSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingMADShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPhasingMR() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPHRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterPdbxPHWT() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxPlasmidDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxPlasmidName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxPointSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPointSymmetryDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPolymerType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxPolySeqScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPostProcessDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPostProcessStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxPrdAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxPrereleaseSeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxProcessingSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxProteinInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxProvenance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameComBuilder

enterPdbxPseudoAtomDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxPtnr1AtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1LeavingAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1ModName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1ReplacedAtom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1StandardCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr1SugarName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr2AtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr2AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr2LeavingAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxPtnr3PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxRange1BegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1BegAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1BegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1BegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1BegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1EndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1EndAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1EndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1EndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange1EndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2BegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2BegLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2BegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2EndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2EndLabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRange2EndLabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterPdbxRComplete() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxRComplete() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxRecordRevised1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterPdbxRecordRevised2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterPdbxRecordRevised3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterPdbxRecordRevised4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxReferenceEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntityNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntityPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntityPolyLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntityPolySeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntitySequence() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntitySrcNat() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceEntitySubcomponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceLinkedEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceLinkedEntityCompLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceLinkedEntityCompList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceLinkedEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMolecule() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeAnnotation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeFamily() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeRelatedStructures() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferenceMoleculeSynonyms() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReferencePublicationList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefineAuxFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefineCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterPdbxRefineComponent() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineAuxFileBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxXplorFileBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

enterPdbxRefineLsRestrNcs() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefineTls() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRefineTlsGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxReflnsTwin() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRejects() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxRejects() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRelatedCodesPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabaseBuilder

enterPdbxRelatedExpDataSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReleaseStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxRemediationAtomSiteMapping() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReplacedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxReplaces() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxReRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxReservedName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxResidueName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterPdbxResidueNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterPdbxResidueNumbering() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxResNetIOverAvSigmaI2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxResNetIOverSigmaI2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRestraintFunction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterPdbxRFreeFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxRFreeSelectionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

enterPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPdbxRmchOutlier() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRmergeIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRmergeIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRmergeIAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRmergeIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxRmergeIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxRmsDevsCovalent() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRmsDevsCovByMonomer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRobotSystem() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxRole() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxRpimIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRpimIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRpimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRpimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRrimIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRrimIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRrimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRrimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRSplit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRSplit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPdbxSalt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxScalingRejects() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPdbxScatCromerMannA5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxScatCromerMannA6() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxScatCromerMannB5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxScatCromerMannB6() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxScatteringType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxScatZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterPdbxSecretion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxSeqAlignBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqAlignBegInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqAlignEndInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxSeqDbAccessionCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxSeqDbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqDbName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxSeqDbSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterPdbxSeqMapDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterPdbxSeqOneLetterCodeCan() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqOneLetterCodeSample() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqThreeLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSeqType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxSequenceAnnotation() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSequenceEvidenceCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxSequencePattern() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSequenceRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSerialCrystalExperiment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnBuilder

enterPdbxSerialCrystallographyDataReduction() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSerialCrystallographyMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSerialCrystallographySampleDelivery() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSerialCrystallographySampleDeliveryFixedTarget() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSerialCrystallographySampleDeliveryInjection() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSGProject() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSinPhaseCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPdbxSmiles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxSoakSalt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxSoakSolv() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxSolnScatter() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSolnScatterModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSolv() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterPdbxSolventAtomSiteMapping() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSolventInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSolventIonProbeRadii() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxSolventShrinkageRadii() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxSolventVdwProbeRadii() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSourceSpecificBeamline() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterPdbxStartingModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxStereochemistry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStereochemistryTargetValues() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxStereochemTargetValSpecCase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxStereoConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxStereoConfig() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterPdbxStndAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterPdbxStrand() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterPdbxStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterPdbxStructAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyAuthClassification() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyAuthEvidence() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyAuthEvidenceDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyGenDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyProp() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAssemblyPropDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructAsymGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructBiolFunc() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructChemCompDiagnostics() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructChemCompFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructConnAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructEntityInst() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructGroupComponentRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructGroupComponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxStructGroupList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructLegacyOperList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructModResidue() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructMsymGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructNcsVirusGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructOperList() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructOperListDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructPackGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqDeletion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqDifDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqFeatureProp() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructRefSeqInsertion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructSheetHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructSpecialSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxStructureRefinementMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterPdbxSubcomponentList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxSugarPhosphateGeometry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSummaryFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSupportingExpDataSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxSynchrotronBeamline() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxSynchrotronSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxSynchrotronYN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxSynonyms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxTableinfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxTargetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterPdbxTargetIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterPdbxTempDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterPdbxTitleText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterPdbxTlsGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterPdbxTLSResidualADPFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterPdbxTotalNumberOfBinsUsed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPdbxTrnaInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

enterPdbxTypeModified() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterPdbxUniqueAxis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterPdbxUnobsOrZeroOccAtoms() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxUnobsOrZeroOccResidues() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxUnpair() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValChiral() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateChiral() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateCloseContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateMainChainPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidatePeptideOmega() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidatePlanes() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidatePlanesAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidatePolymerLinkage() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateRmsdAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateRmsdBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateSymmContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValidateTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValSymContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPdbxVariant() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterPdbxVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterPdbxVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterPdbxVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterPdbxVersion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxViewCategory() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxViewCategoryGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxViewItem() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxVirtualAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxVirtualBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxVirtualTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPdbxWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxWavelengthList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPdbxWavelengthList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPdbxWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterPdbxX_rayImage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxX_rayImageType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPdbxXplorFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseBuilder

enterPDF() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseCodeBuilder

enterPeptidePlanarityRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterPeptidePlanarityRmsDevError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterPercentMarkedReject() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterPercentPossibleAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterPercentPossibleAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPercentPossibleGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterPercentPossibleGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPercentPossibleObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPercentReflnsRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterPercentRejected() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterPerpDist() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

enterPerpDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

enterPh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterPH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

enterPH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterPH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

enterPH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPhase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPhaseCalc() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterPhaseCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterPhaseCalc() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPhaseCalculationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterPhaseErrorRejectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterPhaseMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterPhaseMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterPhasePlate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterPhaseResidual() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionShellBuilder

enterPhaseReversal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterPhaseReversalAnisotropic() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterPhaseReversalCorrectionSpace() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterPhasing() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingAveraging() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingIsomorphous() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMAD() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMADClust() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMADExpt() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMADRatio() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMADSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIR() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIRDer() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIRDerRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIRDerShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIRDerSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingMIRShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPhasingSetRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPHErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterPhi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditContactAuthorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditContactAuthorBuilder

enterPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterPhosphorusShiftsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterPhotonsPerPulse() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterPHUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPixelSizeHeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterPixelSizeWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterPlanarityOverallMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterPlanarityOverallRms() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterPlaneId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompPlaneAtomBuilder

enterPlaneId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder

enterPlaneId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

enterPlaneType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder

enterPlasmid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterPlasmidDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPlasmidId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterPlasmidName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterPlasmidName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterPO1p() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPO2p() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPO5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPO5C5() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPO5C5C4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPointGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsBuilder

enterPointGroupH_M() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

enterPointMeasuredFractionFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterPointMeasuredFractionMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterPointSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

enterPolarisnNorm() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterPolarisnNorm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPolarisnRatio() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterPolarisnRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterPolarization() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterPolymerFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

enterPolymerFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

enterPopulationFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterPopulationFractionSd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterPosAsXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryEquivBuilder

enterPosAsXyz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryEquivBuilder

enterPositionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterPosSiteId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryEquivBuilder

enterPostalCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterPostProcessId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterPostRelRecvdCoord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPostRelRecvdCoordDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPostRelReplacementReason() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterPostRelReplacementReasonDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterPostRelStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterPostTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterPower() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterPower() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterPowerAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPowerBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterPowerCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeListBuilder

enterPrdId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterPreAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreAuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreAuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreCartnX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreCartnY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPreCartnZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPredictedSasa() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterPredictionTarget() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterPreGroupPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPreparation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterPreparation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterPreparation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

enterPrePDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPrePDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterPrePdbxAlign() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

enterPressure() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterPressure() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPressureErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPressureEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterPressureEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterPressureEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterPressureHistory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterPressureSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterPressureUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterPretreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterPrimaryCitationStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterPrintersFinal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPrintersFinal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterPrintersFirst() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterPrintersFirst() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterProbability() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterProbability() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterProbability() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterProbability() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterProbe() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterProbe() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterProbeChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterProbeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLigandProbeBuilder

enterProbeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterProbeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterProbeLinkType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterProbeName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterProbeOrigin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterProbeStoichiometry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

enterProbPeakValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterProcessDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterProcessDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

enterProcessDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterProcessed() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterProcessed() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptBuilder

enterProcessId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterProcessing() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterProcessingFiles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterProcessingPath() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterProcessingSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

enterProcessingSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

enterProcessingSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

enterProcessingSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

enterProcessingVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterProcessName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterProcessSite() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterProductId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterProfileSegmentFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterProgram() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterProgram() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterProgram() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterProgram() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterProgramVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterProgramVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterProgramVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterProjectName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSGProjectBuilder

enterProjMatchingAngularSampling() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterProjMatchingMeritFunction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterProjMatchingNumProjections() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterPromoterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterProofsIn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterProofsIn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterProofsOut() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterProofsOut() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterPropeller() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterPropertiesBiological() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterPropertiesBiological() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterPropertiesPhysical() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterPropertiesPhysical() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterPropertyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterProtCis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonDetailsBuilder

enterProtease() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterProtectionFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

enterProteinBindsTo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

enterProteinChiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterProteinConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterProteinLength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterProteinLocation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterProteinOligomericState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterProteinOtherAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterProteinPhiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterProteinProteaseRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterProteinPsiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

enterProteinPurity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterProteinVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterProteinYield() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterProteinYield() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterProteinYieldMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder

enterProtocolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterProtocolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterProtocolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

enterProtocolName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolBuilder

enterProtocolType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder

enterProtonShiftsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

enterProvenance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

enterProvider() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterPseudorot() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

enterPseudoSiteFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterPseudoSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

enterPseudoSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteFeatureBuilder

enterPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

enterPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

enterPsi() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterPtnr1AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1LabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1Role() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2LabelInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2Role() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

enterPtnr3AuthAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3LabelAltId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPtnr3Symmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterPubl() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPubl() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPublAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPublBody() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublBody() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPublContactAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterPublFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterPublication() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublicationAbbrev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterPublicationMaterial() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterPublicationMaterial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterPublisher() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterPublManuscript() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublManuscriptIncl() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublManuscriptIncl() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterPublManuscriptInclExtra() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublRequested() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPublSection() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterPulseDuration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterPulseEnergy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterPulsePhotonEnergy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterPurificationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterPurificationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterPurificationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterQualityIndicator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterQuantBitSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterR() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterRadiation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterRadiation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterRadiationSourceSpecific() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterRadiationWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterRadius() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

enterRadiusBond() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterRadiusBond() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterRadiusBond() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterRadiusContact() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterRadiusContact() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterRadiusContact() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterRadiusOfGyration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterRadiusR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder

enterRamachandranAllowedNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRamachandranAllowedPercent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRamachandranFavoredNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRamachandranFavoredPercent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRamachandranOutlierNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRamachandranOutlierPercent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRandomConicalTiltAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterRandomConicalTiltNumImages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterRandomExclusionFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterRange1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1BegAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1BegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1BegLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1BegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1EndAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1EndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1EndLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1EndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2AuthCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2BegAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2BegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2BegLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2BegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2EndAuthAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2EndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2EndLabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2EndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRange2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2LabelCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRange2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRangeId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRangeId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRangeId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

enterRangeId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

enterRangeId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterRangeId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterRangeId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

enterRangeId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

enterRank() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterRatio() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterRatio() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterRatio() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterRatioOneWl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterRatioOneWlCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterRatioTwoWl() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterRcsbAnnotator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRcsbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

enterRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterRCullis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterRCullisAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRCullisCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterReactionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterReactiveProbeChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterReactiveProbeFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterReactiveProbeName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

enterRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

enterRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

enterRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterRealSpaceRMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterRealSpaceROverall() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterRealSpaceRSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterRealSpaceRSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

enterRealSpaceZscore() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterReason() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterReasonForInterest() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder

enterRecdCopyright() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterRecdCopyright() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterRecdElectronic() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterRecdElectronic() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterRecdHardCopy() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterRecdHardCopy() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterReceiver() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterReceiverAddressEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterReceiverAddressFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterReceiverAddressMail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterReceiverAddressPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterReciprocalAngleAlpha() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleAlpha() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleAlphaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleAlphaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleAlphaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleBeta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleBeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleBetaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleBetaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleBetaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleGamma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleGamma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleGammaEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalAngleGammaEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalAngleGammaSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthAEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthAEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthASu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthBEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthBEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthBSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthCEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalLengthCEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterReciprocalLengthCSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalMetricTensor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalOrthogonalMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalVectorA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalVectorB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterReciprocalVectorC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterRecombinationEnzymes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterReconstructionMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterRecordingTemperatureMaximum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterRecordingTemperatureMinimum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterRecordName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePdbOmitBuilder

enterRecrystallizationMethod() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterRecvdAuthorApproval() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdChemicalShifts() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdDepositForm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdInitialDepositionDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdInternalApproval() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdManuscript() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdNmrData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRecvdStructFact() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRed() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

enterReductionProcess() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterReductionProcess() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterRedundancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterRedundancyReflnsAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRefCorrectionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

enterRefEntityId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterRefEntityId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterRefEntityId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterReference() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceRefBuilder

enterReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfTypeBuilder

enterReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnTypeBuilder

enterReference() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceRefBuilder

enterReferenceCitationStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterReferenceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

enterReferenceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterReferenceModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmParticleSelectionBuilder

enterReferenceModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVolumeSelectionBuilder

enterReferenceProvider() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterReferences() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterReferences() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterReferenceType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterRefersTo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

enterRefId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterRefId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterRefId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

enterRefId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterRefId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterRefine() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineAnalyze() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineBIso() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineDiff() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterRefineFunctMinimized() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineHist() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineLs() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterRefineLsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterRefineLsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineLsRestr() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineLsRestrNcs() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineLsRestrType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineLsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterRefinementFlags() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRefinementFlags() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsAdp() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsAdp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsOccupancy() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsPosn() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRefinementFlagsPosn() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterRefinementStatus() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterRefinementStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterRefinementType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterRefinementVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterRefineOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefineTlsId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterReflectionStatusArchived() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterReflectionStatusUsed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterReflns() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterReflns() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterReflnsAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterReflnsAnomalous() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterReflnsCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterReflnsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterReflnsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterReflnsCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

enterReflnsCriterion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

enterReflnsPercentRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterReflnsPercentTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterReflnsScale() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterReflnsScale() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterReflnsShell() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterReflnsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterReflnsTwin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterReflnsUsed() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterReflnsUsed() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterReflnSysAbs() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterRefMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterRefoldBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterRefProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterRefSpace() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterRefType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterRejects() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterRejects() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterRelatedAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterRelatedCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterRelatedCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompRelatedBuilder

enterRelatedDatabaseCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterRelatedDatabaseName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterRelatedLiterature() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterRelatedLiterature() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterRelatedType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

enterRelation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

enterRelationship() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDbReferenceBuilder

enterRelationshipType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompRelatedBuilder

enterReleaseStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterReleaseStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

enterRepAtom() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterRepAtom1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterRepAtom2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterReplacedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterReplacedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterReplacedBy() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

enterReplacedEntryId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterReplaceExistingEntryFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterReplacePdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

enterReplacePdbId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterReplaces() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterReplaces() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterReplaces() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

enterRepresentAs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterRepresentationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

enterRepresentationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterRepresentativeConformer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterRepresentativeConformer() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterRepresentativePDBIdCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterRequestedAccessionTypes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterRequestedCategory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterRequestedCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterRequestedCoeditorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterRequestedCoeditorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterRequestedJournal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterRequestedJournal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterResidual() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

enterResidualBFactorsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterResidualTilt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterResidueName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnpairBuilder

enterResidueNames() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHybridBuilder

enterResidueNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnpairBuilder

enterResidueRangeBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterResidueRangeEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

enterResidueRangeGranularity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterResName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterResName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterResName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectModificationBuilder

enterResName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectTypeBuilder

enterResolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterResolutionFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterResolutionMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterResolutionMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterResolutionRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterRestrainedSAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRestrainedSAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRestrainedSGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRestrainedSGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRestraintId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRestraintId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

enterRestraintId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

enterRestraintId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterRestraints() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterRestraints() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

enterRestraintType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterRestrictionEnzyme1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterRestrictionEnzyme2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterResult() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterReversePrimerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterRevisionDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

enterRevisionDate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterRevisionDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRevisionId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterRevisionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditBuilder

enterRevisionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder

enterRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder

enterRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder

enterRevisionType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

enterRevNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevRecordBuilder

enterRFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterRFactorAll4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterRFactorAllLinear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

enterRFactorAllNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterRFactorGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterRFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterRFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRFactorObs4sigCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterRFactorObsNoCutoff() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

enterRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRFactorRFreeError() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

enterRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterRfree_Rwork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterRFreeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterRFsqdFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterRGB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DisplayColourBuilder

enterRGDResHigh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterRGDResLow() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterRGFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterRGFreeWorkRatio() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterRGWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterRIFactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterRise() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterRisePerNSubunits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterRisePerNSubunits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

enterRKraut() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

enterRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

enterRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

enterRKrautCentric() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

enterRMerge() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterRmergeFAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeFAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterRmergeFAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmergeFGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeFGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmergeFObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeFObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterRmergeFObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmergeIAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeIAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmergeIGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeIGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmergeIObs() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

enterRmergeIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterRmergeIObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

enterRmsAngles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsAngles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterRmsAnglesBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsAnglesPhosphate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsAnglesSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsBonds() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsBonds() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

enterRmsBondsBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsBondsPhosphate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsBondsSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

enterRmsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterRmsDev() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

enterRmsDevBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterRmsDevPosition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterRmsf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterRNormalAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterRNormalAnomScat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

enterRo() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

enterRo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterRobotId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterRole() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterRoll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterRotamerOutliersNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRotamerOutliersPercent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

enterRotationPerNSubunits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

enterRotationPerNSubunits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterRotMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRotMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterRotMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterRotMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterRotMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

enterRotMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterRRigidBody() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterRSCC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSCC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonDetailsBuilder

enterRSCCAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSCCAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSCCBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSCCMain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSCCMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSCCPhos() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSCCPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSCCSide() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSCCSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSCCSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonDetailsBuilder

enterRSRAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSRAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSRBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSRMain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSRMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRPhos() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSRPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRSide() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

enterRSRSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRSugar() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterRSRZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRZMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRZPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSRZSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSym() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionStatsBuilder

enterRsymValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

enterRSZD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZDMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZDPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZDSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZO() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZOMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZOPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZOSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRSZOZscore() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterRT() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterRValueRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterRValueRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterS11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS21Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS31Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS32Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterS33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterSameAuthorsAsPdb() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterSameTitleAsPdb() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDepuiBuilder

enterSampleConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterSampleConcentration() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterSampleConcMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterSampleDehydrationPrevention() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterSampleHolding() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterSamplePH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterSamplePreparationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterSamplePrepDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterSampleSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterSampleState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterSampleState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterSampleSupportId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterSampleSupportId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterSampleSupportId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

enterSampleUnitSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterSampleVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterSampleXyzSequenceAlignmentsValid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder

enterSampleXyzSequenceAlignmentsValid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterSamplingSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterScale() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnAttenuatorBuilder

enterScale() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnAttenuatorBuilder

enterScale11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScale33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScaleGroupCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScaleGroupCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterScaleGroupCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScaleGroupCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterScaleSigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterScaleSigma() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterScaleSigma() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterScaleSuAverage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterScaleU() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardBuilder

enterScaleU() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnStandardsBuilder

enterScaleU() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnStandardsBuilder

enterScaleVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScaleVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScaleVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBMatrixBuilder

enterScaleY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterScanMode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScanMode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScanModeBackgd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScanModeBackgd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScannerModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterScanRate() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScanRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScansId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterScanTimeBackgd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScanTimeBackgd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScanWidth() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterScanWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterScatCromerMannA1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannA4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannB4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatCromerMannC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatCromerMannC() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatDispersionImag() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatDispersionImag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatDispersionReal() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatDispersionReal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatDispersionSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatDispersionSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatLengthNeutron() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatLengthNeutron() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterScatterId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterScatVersusStolList() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterScatVersusStolList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterSchema() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterSchoenfliesSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryBuilder

enterSchoenfliesSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

enterScriptFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterScriptFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterScriptFileId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder

enterSection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder

enterSectionAbstract() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionAbstract() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionAcknowledgements() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionAcknowledgements() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionComment() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionComment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionDiscussion() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionDiscussion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionExperimental() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionExperimental() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionExptlPrep() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionExptlPrep() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionExptlRefinement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionExptlRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionExptlSolution() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionExptlSolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionFigureCaptions() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionFigureCaptions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectioning() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterSectionIntroduction() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionIntroduction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionKeywords() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionReferences() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionReferences() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionRelatedLiterature() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionSynopsis() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionSynopsis() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionTableLegends() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionTableLegends() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSectionTitleFootnote() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSectionTitleFootnote() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

enterSeeding() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterSeedingRef() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterSeitzFromJones() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterSeitzMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterSelection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterSelection() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentativeBuilder

enterSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder

enterSelectionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

enterSelectionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterSelectionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

enterSender() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterSender() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterSenderAddressEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterSenderAddressFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterSenderAddressMail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterSenderAddressPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

enterSendStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterSense() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

enterSense() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

enterSeq() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterSeq() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder

enterSeqAlign() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterSeqAlignBeg() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterSeqAlignBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

enterSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

enterSeqDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder

enterSeqDif() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

enterSeqId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

enterSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterSeqId1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

enterSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterSeqId2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

enterSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

enterSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

enterSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterSeqNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

enterSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrereleaseSeqBuilder

enterSeqRangeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

enterSeqRangeId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

enterSeqType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterSequenceAlign() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterSequenceDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterSequencePattern() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequencePatternBuilder

enterSerial() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterSerialNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineAuxFileBuilder

enterSerialNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxXplorFileBuilder

enterSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

enterSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

enterSetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

enterSGEntry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterSgId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupSymopBuilder

enterShadowingApplied() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterShear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterSheetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

enterSheetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

enterSheetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

enterSheetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterSheetId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

enterShift() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterShift() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterShift() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterShiftMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterShiftMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterShiftSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterShiftSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

enterSigma1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterSigma1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterSigma2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

enterSigma2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

enterSigmaFRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterSigmaFTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterSigmaI() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

enterSigmaIRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterSigmaITranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterSinThetaOverLambda() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterSinThetaOverLambda() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterSintOverLambda() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterSintOverLambda() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterSintOverLambda() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterSintOverLambda() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteKeywordsBuilder

enterSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

enterSiteSymmetry() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

enterSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterSiteSymmetry4() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterSiteSymmetry4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterSiteSymmetryA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryA() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryD() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryD() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryH() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

enterSiteSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterSiteSymmetryOrder() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterSize() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterSizeKb() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterSizeLength() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterSizeMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterSizeMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterSizeMid() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterSizeMid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterSizeMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterSizeMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterSizeOfMoleculePerAsymUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

enterSizeRad() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterSizeRad() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

enterSkew() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterSkipPDBREMARK() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterSkipPDBREMARK500() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterSlide() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterSmiles() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterSmilesCanonical() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

enterSoakingDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

enterSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterSoftwareAuthorList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder

enterSoftwareId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder

enterSoftwareLabel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder

enterSoftwareList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

enterSoftwareName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dProjectionSelectionBuilder

enterSoftwareName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterSoftwareName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

enterSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRefineBuilder

enterSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder

enterSolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterSolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

enterSolId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

enterSolutionHydrogens() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterSolutionHydrogens() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterSolutionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

enterSolutionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterSolutionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

enterSolutionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterSolutionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterSolutionPrimary() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterSolutionPrimary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterSolutionSecondary() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterSolutionSecondary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterSolvent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

enterSolventAtomsYN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

enterSolventContent() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterSolventModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterSolventModelParamBsol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterSolventModelParamKsol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

enterSolventOutliers() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterSolventSystem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterSource() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

enterSourceBeamline() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterSourceBeamlineInstrument() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterSourceClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterSourceDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

enterSourceDistance() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterSourceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterSourceId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterSourceOrdinal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterSourceSize() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterSourceType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterSpaceGroup() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSpaceGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterSpaceGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterSpaceGroupGenerator() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSpaceGroupName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryBuilder

enterSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em2dCrystalEntityBuilder

enterSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterSpaceGroupNameHall() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryBuilder

enterSpaceGroupNameHall() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

enterSpaceGroupNum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dCrystalEntityBuilder

enterSpaceGroupPointless() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterSpaceGroupSymop() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSpaceGroupSymop() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterSpaceGroupWyckoff() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSpacingX() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterSpacingY() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterSpacingZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DatabaseRelatedBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterSpecialDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesBuilder

enterSpecialFeature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder

enterSpecies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterSpecimenHolderModel() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterSpecimenHolderType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmBufferBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEmbeddingBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSampleSupportBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmTomographySpecimenBuilder

enterSpecimenId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterSpecimenSupport() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterSpecimenSupport() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnMeasurementBuilder

enterSpecimenSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnMeasurementBuilder

enterSpecimenType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmExperimentBuilder

enterSpecPreparation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlPdBuilder

enterSpecPreparationPH() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlPdBuilder

enterSpecPreparationPHRange() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlPdBuilder

enterSpectralPeakListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterSpectralPeakListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder

enterSpectralRegion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterSpectrometerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterSpectrometerId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterSphAberrationCorrector() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingOpticsBuilder

enterSrcId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

enterSrcMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterSrcMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSourceBuilder

enterStagger() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterStainingApplied() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterStandardCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterStandardCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterStartConstructId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

enterStartingModelAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterStartingModelAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterStartingModelId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

enterStartingModelSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterStartingModelSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterStartingModelSequenceOffset() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterStartingModelSource() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

enterStartSeq() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterStartYear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

enterStateGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterStateId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelGroupLinkBuilder

enterStateId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterStateName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterStateProvince() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

enterStateType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

enterStatisticsAverage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterStatisticsMaximum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterStatisticsMinimum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterStatisticsStd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterStatus() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevBuilder

enterStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingStatusBuilder

enterStatus() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterStatusCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

enterStatusCodeCs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusCodeMr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusCodeNmrData() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusCodeSf() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusCoordinatesInNDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterStatusFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

enterStatusFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

enterStepDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterStepId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterStepMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterStepName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterStepName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterStepNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterStorageBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterStorageBufferId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterStorageDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterStorageTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterStorageType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusNaturalHostBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

enterStrain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterStrandDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder

enterStrandId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHybridBuilder

enterStrColumn(String) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

enterStrColumn(String) - Method in interface org.rcsb.cif.model.CategoryBuilder

Descend 1 level and enter a new StrColumn.

enterStretch() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

enterStruct() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructAssemblyDescription() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

enterStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

enterStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

enterStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

enterStructAsym() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructBiol() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructBiolGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructBiolKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructBiolView() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructConf() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructConfType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructConn() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructConnType() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

enterStructGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

enterStructGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterStructKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructMonDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructMonNucl() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructMonProt() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructMonProtCis() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructNcsDom() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructNcsDomLim() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructNcsEns() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructNcsEnsGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructNcsOper() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructRefSeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructRefSeqDif() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSheet() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSheetHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSheetOrder() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSheetRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSheetTopology() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSiteGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSiteKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructSiteView() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterStructural() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterStructural() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterStructuralGenomicsFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterStructure() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterStructureFactorsYN() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

enterStructureRefinement() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterStructureRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterStructureSolution() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ComputingBuilder

enterStructureSolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ComputingBuilder

enterStructureSolution() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterStructureSolutionVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

enterSubSampleFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterSubSamplingType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

enterSubstructCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterSubterm() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalIndexBuilder

enterSubterm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalIndexBuilder

enterSugarName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHybridBuilder

enterSum() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterSum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterSummary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterSummary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterSummary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

enterSummary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

enterSummary() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

enterSupplPublNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterSupplPublNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterSupplPublPages() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterSupplPublPages() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

enterSupport() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterSupportBase() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterSupportId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSamplePreparationBuilder

enterSweepWidth() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterSweepWidthUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomTypeBuilder

enterSymEquiv() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterSymKey() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterSymLat() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterSymmAsXyz1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterSymmAsXyz2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

enterSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

enterSymmetryAsXyz() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

enterSymmetryDescription() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnBuilder

enterSymmetryEpsilon() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterSymmetryEpsilon() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterSymmetryEquiv() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterSymmetryEquiv() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

enterSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterSymmetrySpaceGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterSymmetryType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dReconstructionBuilder

enterSymmetryType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSingleParticleEntityBuilder

enterSymop() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

enterSymop() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterSynonym() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterSynopsis() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterSynopsis() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterSystem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameSysBuilder

enterSystem() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

enterT() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

enterT11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterT33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

enterTableLegends() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterTableLegends() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterTablename() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterTablename() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterTableSerialNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterTableSerialNo() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterTake_offAngle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterTake_offAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterTakeOffAngle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterTarget() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterTarget() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterTargetCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Em3dFittingBuilder

enterTask() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder

enterTaskName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingStatusBuilder

enterTau0() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTau1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTau2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTau3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTau4() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTaum() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterTaxid() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

enterTaxonomyClass() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterTaxonomyId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

enterTecheditorAddress() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorAddress() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorCode() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorEmail() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorFax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorFax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorName() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorNotes() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorNotes() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTecheditorPhone() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterTecheditorPhone() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterTemp() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterTemp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

enterTempDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmUltramicrotomyBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterTemperature() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterTemperatureDecomposition() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureDecomposition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureDecompositionSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterTemperatureSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterTemperatureSublimation() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureSublimation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationGt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationLt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationLt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalBuilder

enterTemperatureSublimationSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalBuilder

enterTemperatureUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

enterTempEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterTempEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterTempEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterTemplateAuthAsymId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTemplateDatasetListId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTemplateSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTemplateSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTemplateSequenceIdentity() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTemplateSequenceIdentityDenominator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

enterTensorBeta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterTerm() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalIndexBuilder

enterTerm() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalIndexBuilder

enterText() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterText() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSitesFootnoteBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBCaveatBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRemarkBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRemarkBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrDetailsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbCompndBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbSourceBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolKeywordsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructKeywordsBuilder

enterText() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteKeywordsBuilder

enterTextDataFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

enterThermalDisplaceType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterThermalDisplaceType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterThermalHistory() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

enterTheta() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementReflnBuilder

enterTheta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementReflnBuilder

enterThetaFull() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterThetaMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterThetaMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterThetaMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterThetaMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterThetaMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterThetaMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterThetaMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterThetaMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterThickness() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmShadowingBuilder

enterThickness() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

enterThicknessTh() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder

enterThreeLetterCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterThresholdExpression() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

enterThresholdExpression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

enterTIJ() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsTransfMatrixBuilder

enterTilt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterTiltAngleList() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDiffractionBuilder

enterTiltAngleMax() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterTiltAngleMin() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImagingBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

enterTime() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

enterTimeResolvedState() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVitrificationBuilder

enterTimestamp() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

enterTimeUnit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCrystalFormationBuilder

enterTip() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder

enterTissue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterTissueFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

enterTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

enterTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterTitle() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmAdminBuilder

enterTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

enterTitle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

enterTitleFootnote() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

enterTitleFootnote() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

enterTitleSuppression() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

enterTlsGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterTlsGroupNumber() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTlsNoAniso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

enterTLSRefinementReported() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterToAtomId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterToCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterToCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

enterToCompId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterTopolFile() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxXplorFileBuilder

enterTopology() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSupportFilmBuilder

enterTorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompTorValueBuilder

enterTorId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkTorValueBuilder

enterTorsionAngleConstraintViolationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

enterTransfMatrix11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnsBuilder

enterTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnsBuilder

enterTransformationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder

enterTransformationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder

enterTransformationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder

enterTransformationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

enterTransformationId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmRelatedDatasetsBuilder

enterTransformationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterTranslationalPseudoSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTransmissionFactorMax() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterTransmissionFactorMin() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

enterTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

enterTriangulation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusShellBuilder

enterTrVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterTrVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterTrVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterTrVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterTrVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterTrVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterTrVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

enterTrVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

enterTrVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

enterTwinByXtriage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinFraction() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinFractionXtriage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinOperator() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinOperatorXtriage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinRfactor() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwinType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterTwist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnBondBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnDetectorBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterType() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalIndexBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnBondBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBRevRecordBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnDetectorBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmCtfCorrectionBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmDetectorBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFinalClassificationBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmGridPretreatmentBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStainingBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStartModelBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalIndexBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompNonstandardBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordinateModelBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncEnzymeBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncOtherBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncRegulatoryBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncStructuralBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaTypeBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRobotSystemBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructInfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrTypeBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetBuilder

enterTypeComp1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompLinkBuilder

enterTypeComp2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompLinkBuilder

enterTypeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

enterTypeEvidenceCode() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalConnAtomBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAtomBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalConnAtomBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

enterTypeSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

enterU11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU11Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU11Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU11Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU11Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU12Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU12Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU12Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU12Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU13Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU13Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU13Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU13Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU22Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU22Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU22Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU22Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU23Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU23Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU23Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU23Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisotropBuilder

enterU33Esd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterU33Esd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteAnisotropBuilder

enterU33Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteAnisoBuilder

enterU33Su() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUB11() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB12() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB13() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB21() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB21() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB22() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB23() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB31() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB31() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB32() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB32() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB33() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUB33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnOrientMatrixBuilder

enterUBIJ() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnOrientMatrixBuilder

enterUEquivGeomMean() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUEquivGeomMean() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterUEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterUEquivGeomMeanSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUIsoOrEquiv() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterUIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterUIsoOrEquivSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterUnderSamplingType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

enterUnitCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterUnpublishedFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterUpdateRecord() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AuditBuilder

enterUpdateRecord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AuditBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFigureDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder

enterUploadFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

enterUploadFileType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder

enterUploadFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMapDepositorInfoBuilder

enterUploadFormat() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmMaskDepositorInfoBuilder

enterUpperLimit() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder

enterUsedFramesPerImage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmImageScansBuilder

enterUseSasRefine() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterUTls11() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterUTls12() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterUTls13() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterUTls22() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterUTls23() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterUTls33() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

enterVal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterValence() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterValence() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

enterValence() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

enterValenceParam() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterValenceParam() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterValenceRef() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

enterValenceRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

enterValErr() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

enterValidatedContactEmail() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterValidatedModelFileName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

enterValidationNumber() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterValidFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

enterValue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterValue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterValue() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructInfoBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

enterValue() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

enterValueAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterValueAngle() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterValueAngleEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterValueAngleEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterValueDist() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemCompBondBuilder

enterValueDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterValueDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterValueDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterValueDist() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterValueDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompAngleBuilder

enterValueDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterValueDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkAngleBuilder

enterValueDistEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

enterValueEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemCompBondBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompBondBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkBondBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

enterValueOrder() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

enterValueSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterValueSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

enterVec1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterVec1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterVec1() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterVec2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterVec2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterVec2() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterVec3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesBuilder

enterVec3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterVec3() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterVector() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesCartnTransformBuilder

enterVector() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSitesFractTransformBuilder

enterVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

enterVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterVector1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

enterVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterVector2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DatabasePDBTvectBuilder

enterVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

enterVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

enterVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

enterVector3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

enterVectorA() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVectorB() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVectorC() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVectorDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterVectorName() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterVectorType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

enterVelocityHorizontal() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterVelocityVertical() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

enterVerificationMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

enterVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSoftwareBuilder

enterVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

enterVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

enterVersion() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

enterVersionId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

enterVersusStolList() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeBuilder

enterVersusStolList() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomTypeScatBuilder

enterViewGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryBuilder

enterViewGroupId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryGroupBuilder

enterVirusHostCategory() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterVirusHostGrowthCell() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterVirusHostSpecies() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterVirusIsolate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterVirusType() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmVirusEntityBuilder

enterVitrificationApplied() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmSpecimenBuilder

enterVoltage() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnSourceBuilder

enterVoltage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnSourceBuilder

enterVoltage() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EmFocusedIonBeamBuilder

enterVolume() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVolume() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

enterVolume() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

enterVolume3() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

enterVolumeEsd() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVolumeEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterVolumeFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterVolumeFlag() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterVolumePooledFractions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterVolumeSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellBuilder

enterVolumeThree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterVolumeThree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterVolumeThreeEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemCompChirBuilder

enterVolumeThreeEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemLinkChirBuilder

enterVolumeUnits() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CellMeasurementBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellMeasurementBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterWavelength1() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterWavelength2() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

enterWavelengthDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterWavelengthDetails() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

enterWavelengthDetermination() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnReflnBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnReflnBuilder

enterWavelengthId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

enterWavelengthSu() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterWeight() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

enterWeight() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

enterWeightBIso() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterWeightedRealSpaceR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

enterWeightedRSR() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWeightedRSRZ() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWeightingDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterWeightingDetails() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterWeightingScheme() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterWeightingScheme() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterWeightMeas() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ChemicalFormulaBuilder

enterWeightMeas() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ChemicalFormulaBuilder

enterWeightPosition() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

enterWorkingSetCount() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterWRFactorAll() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

enterWRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

enterWRFactorGt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterWRFactorObs() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterWRFactorRef() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

enterWRFactorRFree() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterWRFactorRWork() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

enterWRSRMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWRSRPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWRSRSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWRSRZMainChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWRSRZPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWRSRZSideChain() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

enterWt() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterWt() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder

enterWwpdbSiteId() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

enterWWWReportCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterWWWReportCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterWWWSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

enterWWWSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

enterWyckoffSymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.AtomSiteBuilder

enterWyckoffSymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.AtomSiteBuilder

enterXbeam() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterXbeamEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterXcoord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder

enterXDisplacement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterXfelPulseEvents() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterXfelPulseRepetitionRate() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

enterXfelRunNumbers() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

enterXraySymbol() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.DiffrnRadiationBuilder

enterXraySymbol() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.DiffrnRadiationBuilder

enterXyz() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupGeneratorBuilder

enterYbeam() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterYbeamEsd() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

enterYcoord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder

enterYDisplacement() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

enterYear() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.CitationBuilder

enterYear() - Method in class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

enterYear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CitationBuilder

enterYear() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

enterYieldMethod() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterYieldPooledFractions() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

enterZ_score() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterZcoord() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder

enterZeta() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

enterZPDB() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.CellBuilder

enterZScoreLTest() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

enterZscoreRotation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

enterZscoreTranslation() - Method in class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

Entity - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY category record details (such as chemical composition, name and source) about the molecular entities that are present in the crystallographic structure.

Entity(Category) - Constructor for class org.rcsb.cif.schema.mm.Entity

EntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityBuilder

EntityKeywords - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_KEYWORDS category specify keywords relevant to the molecular entities.

EntityKeywords(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityKeywords

EntityKeywordsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityKeywordsBuilder

EntityLink - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_LINK category give details about the links between entities.

EntityLink(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityLink

EntityLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityLinkBuilder

EntityNameCom - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_NAME_COM category record the common name or names associated with the entity.

EntityNameCom(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityNameCom

EntityNameComBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameComBuilder

EntityNameSys - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_NAME_SYS category record the systematic name or names associated with the entity and the system that was used to construct the systematic name.

EntityNameSys(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityNameSys

EntityNameSysBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityNameSysBuilder

EntityPoly - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_POLY category record details about the polymer, such as the type of the polymer, the number of monomers and whether it has nonstandard features.

EntityPoly(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityPoly

EntityPolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolyBuilder

EntityPolySeq - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_POLY_SEQ category specify the sequence of monomers in a polymer.

EntityPolySeq(Category) - Constructor for class org.rcsb.cif.schema.mm.EntityPolySeq

EntityPolySeqBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntityPolySeqBuilder

EntitySrcGen - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_SRC_GEN category record details of the source from which the entity was obtained in cases where the source was genetically manipulated.

EntitySrcGen(Category) - Constructor for class org.rcsb.cif.schema.mm.EntitySrcGen

EntitySrcGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcGenBuilder

EntitySrcNat - Class in org.rcsb.cif.schema.mm

Data items in the ENTITY_SRC_NAT category record details of the source from which the entity was obtained in cases where the entity was isolated directly from a natural tissue.

EntitySrcNat(Category) - Constructor for class org.rcsb.cif.schema.mm.EntitySrcNat

EntitySrcNatBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntitySrcNatBuilder

Entry - Class in org.rcsb.cif.schema.mm

There is only one item in the ENTRY category, _entry.id.

Entry(Category) - Constructor for class org.rcsb.cif.schema.mm.Entry

EntryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryBuilder

EntryLink - Class in org.rcsb.cif.schema.mm

Data items in the ENTRY_LINK category record the relationships between the current data block identified by _entry.id and other data blocks within the current file which may be referenced in the current data block.

EntryLink(Category) - Constructor for class org.rcsb.cif.schema.mm.EntryLink

EntryLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.EntryLinkBuilder

entrySet() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

equals(Object) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Exptl - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the experimental work prior to diffraction measurements.

Exptl - Class in org.rcsb.cif.schema.mm

Data items in the EXPTL category record details about the experimental work prior to the intensity measurements and details about the absorption-correction technique employed.

Exptl(Category) - Constructor for class org.rcsb.cif.schema.mm.Exptl

Exptl(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Exptl

ExptlAbsorpt - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the experimental details of the absorption measurements and corrections to the diffraction data.

ExptlAbsorpt(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ExptlAbsorpt

ExptlAbsorptBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlAbsorptBuilder

ExptlBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlBuilder

ExptlBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlBuilder

ExptlCrystal - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify information about crystals used in the diffraction measurements.

ExptlCrystal - Class in org.rcsb.cif.schema.mm

Data items in the EXPTL_CRYSTAL category record the results of experimental measurements on the crystal or crystals used, such as shape, size or density.

ExptlCrystal(Category) - Constructor for class org.rcsb.cif.schema.mm.ExptlCrystal

ExptlCrystal(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ExptlCrystal

ExptlCrystalAppearance - Class in org.rcsb.cif.schema.core

The CATEGORY of ENUMERATION items used to specify information about the crystal colour and appearance.

ExptlCrystalAppearance(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ExptlCrystalAppearance

ExptlCrystalAppearanceBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalAppearanceBuilder

ExptlCrystalBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalBuilder

ExptlCrystalBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalBuilder

ExptlCrystalFace - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the dimensions of the crystal used in the diffraction measurements.

ExptlCrystalFace - Class in org.rcsb.cif.schema.mm

Data items in the EXPTL_CRYSTAL_FACE category record details of the crystal faces.

ExptlCrystalFace(Category) - Constructor for class org.rcsb.cif.schema.mm.ExptlCrystalFace

ExptlCrystalFace(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ExptlCrystalFace

ExptlCrystalFaceBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ExptlCrystalFaceBuilder

ExptlCrystalFaceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalFaceBuilder

ExptlCrystalGrow - Class in org.rcsb.cif.schema.mm

Data items in the EXPTL_CRYSTAL_GROW category record details about the conditions and methods used to grow the crystal.

ExptlCrystalGrow(Category) - Constructor for class org.rcsb.cif.schema.mm.ExptlCrystalGrow

ExptlCrystalGrowBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowBuilder

ExptlCrystalGrowComp - Class in org.rcsb.cif.schema.mm

Data items in the EXPTL_CRYSTAL_GROW_COMP category record details about the components of the solutions that were 'mixed' (by whatever means) to produce the crystal.

ExptlCrystalGrowComp(Category) - Constructor for class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

ExptlCrystalGrowCompBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder

F

fetchUrl(String) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

The URL from which files should be fetched - must follow the pattern: www.source.com/%s.cif, where %s represents the pdbId to be inserted into the URL to fetch the correct file.

fileFormatHint(CifOptions.CifOptionsBuilder.FileFormat) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

The library can automatically detect compression and file format.

filterCategory(String) - Method in class org.rcsb.cif.CifOptions

Checks whether this category should be written to output files.

filterColumn(String, String) - Method in class org.rcsb.cif.CifOptions

Checks whether this column should be written to output files.

FixedPointEncoding - Class in org.rcsb.cif.binary.encoding

Converts an array of floating point numbers to a Int32Array multiplied by a given factor.

FixedPointEncoding(int) - Constructor for class org.rcsb.cif.binary.encoding.FixedPointEncoding

FixedPointEncoding(int, int) - Constructor for class org.rcsb.cif.binary.encoding.FixedPointEncoding

FLOAT32 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Float32Array - Class in org.rcsb.cif.binary.data

An array of floating point numbers using 32 bit to store each value.

Float32Array(double[]) - Constructor for class org.rcsb.cif.binary.data.Float32Array

Float32Array(double[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Float32Array

Float32Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Float32Array

FLOAT64 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Float64Array - Class in org.rcsb.cif.binary.data

An array of floating point numbers using 64 bit to store each value.

Float64Array(double[]) - Constructor for class org.rcsb.cif.binary.data.Float64Array

Float64Array(double[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Float64Array

Float64Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Float64Array

FloatArray - Interface in org.rcsb.cif.binary.data

An array of floating point numbers.

FloatColumn - Interface in org.rcsb.cif.model

A column that provides float data.

FloatColumnBuilder<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Interface in org.rcsb.cif.model

A builder instance for FloatColumn instances.

FloatColumnBuilderImpl<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

FloatColumnBuilderImpl(String, String, P) - Constructor for class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

Function - Class in org.rcsb.cif.schema.core

The crystallographic functions the invoked in the definition methods of CORE STRUCTURE data items defined and used with in the Crystallographic Information Framework (CIF).

Function(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Function

FunctionBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.FunctionBuilder

G

Geom - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the geometry of the structural model as derived from the atomic sites.

Geom - Class in org.rcsb.cif.schema.mm

Data items in the GEOM and related (GEOM_ANGLE, GEOM_BOND, GEOM_CONTACT, GEOM_HBOND and GEOM_TORSION) categories record details about the molecular geometry as calculated from the contents of the ATOM, CELL and SYMMETRY data.

Geom(Category) - Constructor for class org.rcsb.cif.schema.mm.Geom

Geom(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Geom

GeomAngle - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the geometry angles in the structural model as derived from the atomic sites.

GeomAngle - Class in org.rcsb.cif.schema.mm

Data items in the GEOM_ANGLE category record details about the bond angles as calculated from the contents of the ATOM, CELL and SYMMETRY data.

GeomAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.GeomAngle

GeomAngle(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.GeomAngle

GeomAngleBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomAngleBuilder

GeomAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomAngleBuilder

GeomBond - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the geometry bonds in the structural model as derived from the atomic sites.

GeomBond - Class in org.rcsb.cif.schema.mm

Data items in the GEOM_BOND category record details about the bond lengths as calculated from the contents of the ATOM, CELL and SYMMETRY data.

GeomBond(Category) - Constructor for class org.rcsb.cif.schema.mm.GeomBond

GeomBond(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.GeomBond

GeomBondBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBondBuilder

GeomBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBondBuilder

GeomBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomBuilder

GeomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomBuilder

GeomContact - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the interatomic contact distances in the structural model.

GeomContact - Class in org.rcsb.cif.schema.mm

Data items in the GEOM_CONTACT category record details about interatomic contacts as calculated from the contents of the ATOM, CELL and SYMMETRY data.

GeomContact(Category) - Constructor for class org.rcsb.cif.schema.mm.GeomContact

GeomContact(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.GeomContact

GeomContactBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomContactBuilder

GeomContactBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomContactBuilder

GeomHbond - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the hydrogen bond distances in the structural model as derived from atomic sites.

GeomHbond - Class in org.rcsb.cif.schema.mm

Data items in the GEOM_HBOND category record details about hydrogen bonds as calculated from the contents of the ATOM, CELL and SYMMETRY data.

GeomHbond(Category) - Constructor for class org.rcsb.cif.schema.mm.GeomHbond

GeomHbond(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.GeomHbond

GeomHbondBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomHbondBuilder

GeomHbondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomHbondBuilder

GeomTorsion - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify the torsion angles in the structural model as derived from the atomic sites.

GeomTorsion - Class in org.rcsb.cif.schema.mm

Data items in the GEOM_TORSION category record details about torsion angles as calculated from the contents of the ATOM, CELL and SYMMETRY data.

GeomTorsion(Category) - Constructor for class org.rcsb.cif.schema.mm.GeomTorsion

GeomTorsion(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.GeomTorsion

GeomTorsionBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.GeomTorsionBuilder

GeomTorsionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.GeomTorsionBuilder

get(int) - Method in class org.rcsb.cif.model.binary.BinaryFloatColumn

get(int) - Method in class org.rcsb.cif.model.binary.BinaryIntColumn

get(int) - Method in class org.rcsb.cif.model.binary.BinaryStrColumn

get(int) - Method in interface org.rcsb.cif.model.FloatColumn

Type-safe access to the native type of data stored in this column.

get(int) - Method in interface org.rcsb.cif.model.IntColumn

Type-safe access to the native type of data stored in this column.

get(int) - Method in interface org.rcsb.cif.model.StrColumn

Type-safe access to the native type of data stored in this column.

get(int) - Method in class org.rcsb.cif.model.text.TextColumn

get(int) - Method in class org.rcsb.cif.schema.DelegatingFloatColumn

get(int) - Method in class org.rcsb.cif.schema.DelegatingIntColumn

get(int) - Method in class org.rcsb.cif.schema.DelegatingStrColumn

get(Object) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

get_11() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_11() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_12() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_12() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_13() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_13() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_21() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_21() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_22() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_22() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_23() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_23() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_2dCrystalGrowId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

This data item is a pointer to _em_2d_crystal_grow.id in the 2D_CRYSTAL_GROW category.

get_31() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_31() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_32() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_32() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_33() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_33() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

get_3dFittingId() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

The value of _em_3d_fitting_list.3d_fitting_id is a pointer to _em_3d_fitting.id in the 3d_fitting category

getA() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell length A

getAbsoluteConfiguration() - Method in class org.rcsb.cif.schema.core.Chemical

Necessary conditions for this assignment are given by Flack, H.

getAbsoluteConfiguration() - Method in class org.rcsb.cif.schema.mm.Chemical

Necessary conditions for the assignment of _chemical.absolute_configuration are given by H.

getAbsorptCoefficientMu() - Method in class org.rcsb.cif.schema.core.Exptl

Absorption coefficient mu calculated from the atomic content of the cell, the density and the radiation wavelength.

getAbsorptCoefficientMu() - Method in class org.rcsb.cif.schema.mm.Exptl

The absorption coefficient mu in reciprocal millimetres calculated from the atomic content of the cell, the density and the radiation wavelength.

getAbsorptCorrectionTMax() - Method in class org.rcsb.cif.schema.core.Exptl

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getAbsorptCorrectionTMax() - Method in class org.rcsb.cif.schema.mm.Exptl

The maximum transmission factor for the crystal and radiation.

getAbsorptCorrectionTMin() - Method in class org.rcsb.cif.schema.core.Exptl

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getAbsorptCorrectionTMin() - Method in class org.rcsb.cif.schema.mm.Exptl

The minimum transmission factor for the crystal and radiation.

getAbsorptCorrectionType() - Method in class org.rcsb.cif.schema.core.Exptl

Code identifying the absorption correction type and method.

getAbsorptCorrectionType() - Method in class org.rcsb.cif.schema.mm.Exptl

The absorption correction type and method.

getAbsorptProcessDetails() - Method in class org.rcsb.cif.schema.core.Exptl

Description of the absorption correction process applied to the measured intensities.

getAbsorptProcessDetails() - Method in class org.rcsb.cif.schema.mm.Exptl

Description of the absorption process applied to the intensities.

getAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.Refine

Details on the absolute structure and how it was determined.

getAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.RefineLs

Details on the absolute structure and how it was determined.

getAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.Refine

The measure of absolute structure as defined by Flack (1983).

getAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.RefineLs

The measure of absolute structure as defined by Flack (1983).

getAbsStructureFlackSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the The measure of absolute structure as defined by Flack (1983).

getAbsStructureFlackSu() - Method in class org.rcsb.cif.schema.core.RefineLs

Standard Uncertainty of the The measure of absolute structure as defined by Flack (1983).

getAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.Refine

The measure of absolute structure as defined by Rogers (1981).

getAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.RefineLs

The measure of absolute structure as defined by Rogers (1981).

getAbsStructureRogersSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the The measure of absolute structure as defined by Rogers (1981).

getAbsStructureRogersSu() - Method in class org.rcsb.cif.schema.core.RefineLs

Standard Uncertainty of the The measure of absolute structure as defined by Rogers (1981).

getAbstract() - Method in class org.rcsb.cif.schema.core.Citation

Abstract for the citation.

getAbstract() - Method in class org.rcsb.cif.schema.core.Publ

The abstract of the submitted paper.

getAbstract() - Method in class org.rcsb.cif.schema.core.PublSection

The abstract of the submitted paper.

getAbstract() - Method in class org.rcsb.cif.schema.mm.Citation

Abstract for the citation.

getAbstractIdCAS() - Method in class org.rcsb.cif.schema.core.Citation

Chemical Abstracts Service (CAS) abstract identifier.

getAbstractIdCAS() - Method in class org.rcsb.cif.schema.mm.Citation

The Chemical Abstracts Service (CAS) abstract identifier; relevant for journal articles.

getACalc() - Method in class org.rcsb.cif.schema.core.Refln

The calculated real structure-factor component A =|Fcalc|cos(phase)

getACalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of structure-factor component A in electrons.

getACalcAu() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of structure-factor component A in arbitrary units.

getAcceleratingVoltage() - Method in class org.rcsb.cif.schema.mm.EmImaging

A value of accelerating voltage (in kV) used for imaging.

getAccepted() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication was accepted.

getAccepted() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication was accepted.

getAccessCode() - Method in class org.rcsb.cif.schema.mm.EmDbReference

Unique identifier for a provided link.

getAccessionCode() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

The accession code for the database entry.

getAcknowledgements() - Method in class org.rcsb.cif.schema.core.Publ

The acknowledgements section of the submitted paper.

getAcknowledgements() - Method in class org.rcsb.cif.schema.core.PublSection

The acknowledgements section of the submitted paper.

getActionType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

The action associated with this audit record.

getActionType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

The action associated with this audit record.

getActionType() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

The action associated with this audit record.

getActionType() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

The action associated with this audit record.

getActualPixelSize() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The actual pixel size of projection set of images.

getAddress() - Method in class org.rcsb.cif.schema.core.AuditAuthor

The address of an author of this data block.

getAddress() - Method in class org.rcsb.cif.schema.core.AuditContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed.

getAddress() - Method in class org.rcsb.cif.schema.core.Journal

The postal address of the coeditor.

getAddress() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The postal address of the coeditor.

getAddress() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Postal address of the technical editor for this publication.

getAddress() - Method in class org.rcsb.cif.schema.core.Publ

The address of the author submitting the manuscript and data block.

getAddress() - Method in class org.rcsb.cif.schema.core.PublAuthor

The address of a publication author.

getAddress() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

The address of the author submitting the manuscript and data block.

getAddress() - Method in class org.rcsb.cif.schema.mm.AuditAuthor

The address of an author of this data block.

getAddress() - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed.

getAddress() - Method in class org.rcsb.cif.schema.mm.PdbxAuditAuthor

The address of an author of this data block.

getAddress() - Method in class org.rcsb.cif.schema.mm.PublAuthor

The address of a publication author.

getAddress1() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, line 1 of 3.

getAddress2() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, line 2 of 3.

getAddress3() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, line 3 of 3.

getAdpEigenSystem() - Method in class org.rcsb.cif.schema.core.ModelSite

The set of three adp eigenvales and associated eigenvectors in the form of 4 element List.

getAdpMatrixBeta() - Method in class org.rcsb.cif.schema.core.ModelSite

Matrix of dimensionless anisotropic atomic displacement parameters.

getAdpOutliersLow() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

Count of atoms with ADP (B-values) values less than 0

getAdpOutliersZero() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

A flag to indicate if any isotropic B factors are zero.

getAdpType() - Method in class org.rcsb.cif.schema.core.AtomSite

Code for type of atomic displacement parameters used for the site.

getAdpType() - Method in class org.rcsb.cif.schema.mm.AtomSite

A standard code used to describe the type of atomic displacement parameters used for the site.

getAggregationState() - Method in class org.rcsb.cif.schema.mm.EmAssembly

A description of the aggregation state of the assembly.

getAggregationState() - Method in class org.rcsb.cif.schema.mm.EmExperiment

The aggregation/assembly state of the imaged specimen.

getAlgorithm() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The algorithm used project from 2D orientations to 3D map.

getAliasedColumn(String...) - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getAlignId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

This data item is a pointer to _struct_ref_seq.align_id in the STRUCT_REF_SEQ category.

getAlignId() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The value of _struct_ref_seq.align_id must uniquely identify a record in the STRUCT_REF_SEQ list.

getAlignId() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

This data item is a pointer to _struct_ref_seq.align_id in the STRUCT_REF_SEQ category.

getAlignmentFileId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The file id corresponding to the sequence alignment of the template sequence and the comparative model sequence.

getAlignmentProcedure() - Method in class org.rcsb.cif.schema.mm.EmImaging

microscope alignment procedure

getAlignPos() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Starting column of atom name in PDB atom field.

getAllAtomClashscore() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

All atom score is determined by steric overlaps >0.4A per 1000 atoms.

getAllChains() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

Flag indicating that all polymer chains are used in the assembly

getAlpha() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell angle alpha.

getAlpha() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle alpha (O3'-P-O5'-C5').

getAlphaTolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell angle alpha.

getAltAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative identifier for the atom.

getAltCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

The alternate chemical component identifier matching the deposited chemical component.

getAltId() - Method in class org.rcsb.cif.schema.mm.AtomSitesAltGen

This data item is a pointer to _atom_sites_alt.id in the ATOM_SITES_ALT category.

getAmbientEnvironment() - Method in class org.rcsb.cif.schema.core.Diffrn

The gas or liquid environment of the crystal sample, if not air.

getAmbientEnvironment() - Method in class org.rcsb.cif.schema.mm.Diffrn

The gas or liquid surrounding the sample, if not air.

getAmbientPressure() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean hydrostatic pressure at which intensities were measured.

getAmbientPressure() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean hydrostatic pressure in kilopascals at which the intensities were measured.

getAmbientPressureEsd() - Method in class org.rcsb.cif.schema.core.Diffrn

Standard Uncertainty of the Mean hydrostatic pressure at which intensities were measured.

getAmbientPressureEsd() - Method in class org.rcsb.cif.schema.mm.Diffrn

The estimated standard deviation of _diffrn.ambient_pressure.

getAmbientPressureGt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean hydrostatic pressure above which intensities were measured.

getAmbientPressureGt() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean hydrostatic pressure in kilopascals above which the intensities were measured.

getAmbientPressureLt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean hydrostatic pressure below which intensities were measured.

getAmbientPressureLt() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean hydrostatic pressure in kilopascals below which the intensities were measured.

getAmbientPressureSu() - Method in class org.rcsb.cif.schema.core.Diffrn

Standard Uncertainty of the Mean hydrostatic pressure at which intensities were measured.

getAmbientTemp() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature at which intensities were measured.

getAmbientTemp() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean temperature in kelvins at which the intensities were measured.

getAmbientTempDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

A description of special aspects of temperature control during data collection.

getAmbientTempDetails() - Method in class org.rcsb.cif.schema.mm.Diffrn

A description of special aspects of temperature control during data collection.

getAmbientTemperature() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature at which intensities were measured.

getAmbientTemperatureDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

A description of special aspects of temperature control during data collection.

getAmbientTemperatureGt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature above which intensities were measured.

getAmbientTemperatureLt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature below which intensities were measured.

getAmbientTemperatureSu() - Method in class org.rcsb.cif.schema.core.Diffrn

Standard Uncertainty of the mean temperature at which intensities were measured.

getAmbientTempEsd() - Method in class org.rcsb.cif.schema.core.Diffrn

Standard Uncertainty of the mean temperature at which intensities were measured.

getAmbientTempEsd() - Method in class org.rcsb.cif.schema.mm.Diffrn

The standard uncertainty (estimated standard deviation) of _diffrn.ambient_temp.

getAmbientTempGt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature above which intensities were measured.

getAmbientTempGt() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean temperature in kelvins above which the intensities were measured.

getAmbientTempLt() - Method in class org.rcsb.cif.schema.core.Diffrn

Mean temperature below which intensities were measured.

getAmbientTempLt() - Method in class org.rcsb.cif.schema.mm.Diffrn

The mean temperature in kelvins below which the intensities were measured.

getAmbiguousStoichiometryFlag() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

Indicate whether there is ambiguity regarding the stoichiometry of the labeled site.

getAMeas() - Method in class org.rcsb.cif.schema.core.Refln

The measured real structure-factor component A =|Fmeas|cos(phase)

getAMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of structure-factor component A in electrons.

getAMeasAu() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of structure-factor component A in arbitrary units.

getAmplitudeCorrection() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Yes if CTF amplitude correction was performed

getAmplitudeCorrectionFactor() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Amplitude correction factor used in CTF correction

getAmplitudeCorrectionSpace() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

CTF amplitude correction space

getAnalysisId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

An identifier for the post modeling analysis.

getAnalytical() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Formula determined by standard chemical analysis including trace elements.

getAnalytical() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

Formula determined by standard chemical analysis including trace elements.

getAnalyticalMass() - Method in class org.rcsb.cif.schema.core.AtomType

Mass percentage of this atom type derived from chemical analysis.

getAnalyticalMassPercent() - Method in class org.rcsb.cif.schema.core.AtomType

Mass percentage of this atom type derived from chemical analysis.

getAnalyticalMassPercent() - Method in class org.rcsb.cif.schema.mm.AtomType

Mass percentage of this atom type derived from chemical analysis.

getAngle() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Angle defined by the sites identified by _geom_torsion.id.

getAngle() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed in degrees.

getAngle() - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed in degrees.

getAngle() - Method in class org.rcsb.cif.schema.mm.EmShadowing

The shadowing angle (degrees)

getAngle() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Value of the angle deviating by more than 6*RMSD from the expected dictionary value.

getAngleAlpha() - Method in class org.rcsb.cif.schema.core.Cell

The angle between the bounding cell axes.

getAngleAlpha() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell angle alpha of the reported structure in degrees.

getAngleAlpha() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell angle alpha in degrees.

getAngleAlphaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleAlphaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.angle_alpha.

getAngleAlphaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleBeta() - Method in class org.rcsb.cif.schema.core.Cell

The angle between the bounding cell axes.

getAngleBeta() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell angle beta of the reported structure in degrees.

getAngleBeta() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell angle beta in degrees.

getAngleBetaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleBetaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.angle_beta.

getAngleBetaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleChi() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAngleChi() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAngleChi() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle chi of a reflection used to define the orientation matrix in degrees.

getAngleChi() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle chi of a reflection in degrees.

getAngleDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Value of the deviation (in degrees) from 6*RMSD for the angle bounded by the three sites from the expected dictionary value

getAngleDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Value of the deviation (in degrees) from 6*REBI for the angle bounded by the three sites from the expected dictionary value.

getAngleDHA() - Method in class org.rcsb.cif.schema.core.GeomHbond

Angle subtended by the sites identified by _geom_hbond.id.

getAngleDHA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The angle in degrees defined by the donor-, hydrogen- and acceptor-atom sites in a hydrogen bond.

getAngleDHAEsd() - Method in class org.rcsb.cif.schema.core.GeomHbond

The standard uncertainty of the angle subtended by the sites identified by _geom_hbond.id.

getAngleDHAEsd() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The standard uncertainty (estimated standard deviation) of _geom_hbond.angle_DHA.

getAngleDHASu() - Method in class org.rcsb.cif.schema.core.GeomHbond

The standard uncertainty of the angle subtended by the sites identified by _geom_hbond.id.

getAngleEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

The standard uncertainty (estimated standard deviation) of _chem_comp_tor_value.angle.

getAngleEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

The standard uncertainty (estimated standard deviation) of _chem_link_tor_value.angle.

getAngleGamma() - Method in class org.rcsb.cif.schema.core.Cell

The angle between the bounding cell axes.

getAngleGamma() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell angle gamma of the reported structure in degrees.

getAngleGamma() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Unit-cell angle gamma in degrees.

getAngleGamma() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell angle gamma in degrees.

getAngleGammaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleGammaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.angle_gamma.

getAngleGammaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getAngleKappa() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAngleKappa() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAngleKappa() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle kappa of a reflection used to define the orientation matrix in degrees.

getAngleKappa() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle kappa of a reflection in degrees.

getAngleLigandMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for bond angles (ligand only).

getAngleLigandRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for bond angles (ligand only).

getAngleLowerLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The lower limit to the threshold applied to this angle restraint in the integrative modeling task.

getAngleLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The estimated standard deviation of the lower limit angle threshold applied.

getAngleOmega() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAngleOmega() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAngleOmega() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle omega of a reflection used to define the orientation matrix in degrees.

getAngleOmega() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle omega of a reflection in degrees.

getAngleOutOfPlane() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Out-of-plane angle for neighbor W

getAngleOverallMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for bond angles (all atoms).

getAngleOverallRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for bond angles (all atoms).

getAnglePhi() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAnglePhi() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAnglePhi() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle phi of a reflection used to define the orientation matrix in degrees.

getAnglePhi() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle phi of a reflection in degrees.

getAnglePsi() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAnglePsi() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAnglePsi() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle psi of a reflection used to define the orientation matrix in degrees.

getAnglePsi() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle psi of a reflection in degrees.

getAngleStandardDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

The uncertainty in the target value of the bond angle expressed as a standard deviation.

getAngleSu() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Standard Uncertainty of the torsion angle.

getAngleTargetValue() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

The target value of the bond angle

getAngleTheta() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Diffractometer angle of a reflection measured at the centre of the diffraction peak and used to determine _diffrn_orient_matrix.UBIJ.

getAngleTheta() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Diffractometer angle at which the intensity is measured.

getAngleTheta() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Diffractometer angle theta of a reflection used to define the orientation matrix in degrees.

getAngleTheta() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer angle theta of a reflection in degrees.

getAngleThresholdEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The estimated standard deviation of the angle threshold applied to the restraint.

getAngleThresholdMean() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The angle threshold mean applied to the restraint.

getAngleUpperLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The upper limit to the threshold applied to this angle restraint in the integrative modeling task.

getAngleUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The estimated standard deviation of the upper limit angle threshold applied.

getAngleValue() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

The value of the bond angle

getAngularRotationPerSubunit() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

The angular rotation per helical subunit in degrees.

getAnisoB11() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB11() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB11() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB11Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB11Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoB12() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB12() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB12() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB12Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB12Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoB13() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB13() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB13() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB13Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB13Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoB22() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB22() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB22() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB22Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB22Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoB23() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB23() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB23() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB23Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB23Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoB33() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoB33() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoB33() - Method in class org.rcsb.cif.schema.mm.Refine

The elements of the matrix that defines the overall anisotropic displacement model if one was refined for this structure.

getAnisoB33Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getAnisoB33Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_B.

getAnisoRatio() - Method in class org.rcsb.cif.schema.core.AtomSite

Ratio of the maximum to minimum eigenvalues of the atomic displacement (thermal) ellipsoids.

getAnisoRatio() - Method in class org.rcsb.cif.schema.mm.AtomSite

Ratio of the maximum to minimum principal axes of displacement (thermal) ellipsoids.

getAnisotropy() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The anisotropy ( [MaxAnisoB-MinAnisoB]/[MaxAnisoB] ) calculated by Xtriage.

getAnisoU11() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU11() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU11Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU11Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnisoU12() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU12() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU12Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU12Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnisoU13() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU13() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU13Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU13Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnisoU22() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU22() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU22Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU22Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnisoU23() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU23() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU23Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU23Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnisoU33() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getAnisoU33() - Method in class org.rcsb.cif.schema.mm.AtomSite

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getAnisoU33Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getAnisoU33Esd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.aniso_U.

getAnnealingDetails() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

Details of the annealing treatment applied to this crystal.

getAnnotation() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The description of the sequence difference.

getAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.EmMap

map annotation details

getAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

map annotation details

getAnnotationDetails() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

map annotation details

getAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

The initials of the annotator creating of modifying the component.

getAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

The initials of the annotator creating of modifying the component.

getAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

The initials of the annotator creating of modifying the family.

getAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

The name of the annotator.

getAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

The initials of the annotator creating of modifying the molecule.

getApparatus() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The physical apparatus in which the crystal was grown.

getApplication() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroup

The application / utilization of the dataset group in modeling.

getApplyDispersionToFcalc() - Method in class org.rcsb.cif.schema.core.Reflns

Yes or No flag on whether the anomalous dispersion scattering components will be applied in the F complex calculation.

getAreaResolMean() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

The resolution limit of an area diffraction radiation detector.

getAreaResolMean() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The resolution of an area detector, in pixels/mm.

getArray() - Method in class org.rcsb.cif.model.binary.BinaryFloatColumn

getArray() - Method in class org.rcsb.cif.model.binary.BinaryIntColumn

getArray() - Method in class org.rcsb.cif.model.binary.BinaryStrColumn

getArray() - Method in class org.rcsb.cif.model.Column.EmptyColumn

getArray() - Method in interface org.rcsb.cif.model.Column

Access to the underlying data array.

getArray() - Method in class org.rcsb.cif.model.text.TextColumn

Explicitly creates this array by parsing all data in this text column.

getArray() - Method in class org.rcsb.cif.schema.DelegatingColumn

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

This data item is a pointer to _em_assembly.id in the ASSEMBLY category.

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmModelList

An identifier to the structure assembly corresponding to the model.

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClassLink

An identifier for the structural assembly.

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

An identifier for the structural assembly.

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

The value of _pdbx_feature_assembly.assembly_id references an assembly definition in category STRUCT_BIOL

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthClassification

This item references an assembly in pdbx_struct_assembly

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

This item references an assembly in pdbx_struct_assembly

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

This item references an assembly in pdbx_struct_assembly

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

This data item is a pointer to _pdbx_struct_assembly.id in the PDBX_STRUCT_ASSEMBLY category.

getAssemblyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

This data item is a pointer to _pdbx_struct_assembly.id in the PDBX_STRUCT_ASSEMBLY category.

getAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

Pointer to '_pdbx_nmr_assigned_chem_shift_list.ID'

getAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

Pointer to '_pdbx_nmr_assigned_chem_shift_list.id'

getAssignedChemShiftListId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

Pointer to '_pdbx_nmr_assigned_chem_shift_list.id'

getAssociatedUrl() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

The Uniform Resource Locator (URL) corresponding to the external reference (DOI).

getAstigmatism() - Method in class org.rcsb.cif.schema.mm.EmImaging

astigmatism

getASTMCodeType() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

The American Society for Testing and Materials (ASTM) code type.

getASTMCodeValue() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

The American Society for Testing and Materials (ASTM) code assignment.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

An asym/strand identifier corresponding to this gaussian object.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

An asym/strand identifier corresponding to this gaussian object.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

An asym/strand identifier.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

An asym/strand identifier corresponding to this localization density.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

An asym/strand identifier of the non-polymer feature, if applicable.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

An asym/strand identifier of the atom, if applicable.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

An asym/strand identifier for the residue / residue range, if applicable.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

An asym/strand identifier.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

An asym/strand identifier corresponding to this sphere object.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The asym/strand id corresponding to this coordinate position.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

An asym/strand identifier for the entity molecule.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

An asym/strand identifier for the entity molecule.

getAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

An asym/strand identifier for the component in the assembly.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

Pointer to _atom_site.label_asym_id.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxCoordinateModel

A reference to _struct_asym.id.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Instance identifier for this entity.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityInstanceList

A reference to _struct_asym.id in the STRUCT_ASYM category.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxMolecule

A reference to _struct_asym.id in the STRUCT_ASYM category.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

Pointer to _atom_site.label_asym_id.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Pointer to _atom_site.label_asym_id.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAsymGen

This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

Instance identifier for the polymer molecule.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

Instance identifier for the polymer molecule.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

The NCS operation is applied to the component of the asymmetric unit identified by this id.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

Identifies the polymer entity instance in this entry corresponding to the reference sequence in which the deletion is specified.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Instance identifier for the polymer molecule.

getAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the identifier of the inserted residue.

getAsymId() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

getAsymId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

An asym/strand identifier for the first monomer partner in the cross-link.

getAsymId1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

An asym/strand identifier for the first monomer partner in the predicted contact.

getAsymId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

An asym/strand identifier for the second monomer partner in the cross-link.

getAsymId2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

An asym/strand identifier for the second monomer partner in the predicted contact.

getAsymIdList() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

getAsymIdList() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

getAtcc() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The Americal Tissue Culture Collection code for organism from which the entity was isolated.

getAtmosphere() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

The type of atmosphere in which crystals were grown

getAtmosphere() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

The atmosphere used for glow discharge of the em grid.

getAtmosphere() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The nature of the gas or gas mixture in which the crystal was grown.

getATolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell length A

getAtom() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe atomic information used in crystallographic structure studies.

getAtom1() - Method in class org.rcsb.cif.schema.core.ChemicalConnBond

Index id of first atom in a bond connecting two atom sites.

getAtom1() - Method in class org.rcsb.cif.schema.core.ValenceParam

Atom type symbol for atom 1 forming a bond whose valence parameters are given in this category.

getAtom1() - Method in class org.rcsb.cif.schema.mm.ChemicalConnBond

This data item is a pointer to _chemical_conn_atom.number in the CHEMICAL_CONN_ATOM category.

getAtom1() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The element symbol of the first atom forming the bond whose bond-valence parameters are given in this category.

getAtom1CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.

getAtom1CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.

getAtom1CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.

getAtom1Valence() - Method in class org.rcsb.cif.schema.core.ValenceParam

The formal charge of the atom 1 whose bond valence parameters are given in this category.

getAtom1Valence() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The valence (formal charge) of the first atom whose bond-valence parameters are given in this category.

getAtom2() - Method in class org.rcsb.cif.schema.core.ChemicalConnBond

Index id of second atom in a bond connecting two atom sites.

getAtom2() - Method in class org.rcsb.cif.schema.core.ValenceParam

Atom type symbol for atom 2 forming a bond whose valence parameters are given in this category.

getAtom2() - Method in class org.rcsb.cif.schema.mm.ChemicalConnBond

This data item is a pointer to _chemical_conn_atom.number in the CHEMICAL_CONN_ATOM category.

getAtom2() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The element symbol of the second atom forming the bond whose bond-valence parameters are given in this category.

getAtom2CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

This data item indicates whether atom 2 is found in the first or the second of the two components connected by the link.

getAtom2CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

This data item indicates whether atom 2 is found in the first or the second of the two chemical components connected by the link.

getAtom2CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

This data item indicates whether atom 2 is found in the first or the second of the two components connected by the link.

getAtom2Valence() - Method in class org.rcsb.cif.schema.core.ValenceParam

The formal charge of the atom 2 whose bond valence parameters are given in this category.

getAtom2Valence() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The valence (formal charge) of the second atom whose bond-valence parameters are given in this category.

getAtom3CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

This data item indicates whether atom 3 is found in the first or the second of the two components connected by the link.

getAtom3CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

This data item indicates whether atom 3 is found in the first or the second of the two components connected by the link.

getAtom4CompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

This data item indicates whether atom 4 is found in the first or the second of the two components connected by the link.

getAtomCompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

This data item indicates whether the chiral atom is found in the first or the second of the two components connected by the link.

getAtomCompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChirAtom

This data item indicates whether the atom bonded to a chiral atom is found in the first or the second of the two components connected by the link.

getAtomCompId() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlaneAtom

This data item indicates whether the atom in a plane is found in the first or the second of the two components connected by the link.

getAtomConfig() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The chiral configuration of the atom that is a chiral centre.

getAtomConfig() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The chiral configuration of the atom that is a chiral centre.

getAtomDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

The deviation from the plane per atom

getAtomGroup() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Group of atoms within a molecule whose chemical shift was used as the standard chemical shift reference for the defined observed nuclei.

getAtomicMass() - Method in class org.rcsb.cif.schema.core.AtomType

Mass of this atom type.

getAtomicMass() - Method in class org.rcsb.cif.schema.core.Cell

Atomic mass of the contents of the unit cell.

getAtomicNumber() - Method in class org.rcsb.cif.schema.core.AtomType

Atomic number of this atom type.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The value of _chem_comp_atom.atom_id must uniquely identify each atom in each monomer in the CHEM_COMP_ATOM list.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The ID of the atom that is a chiral centre.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompChirAtom

The ID of an atom bonded to the chiral atom.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

The ID of an atom involved in the plane.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The ID of the atom that is a chiral centre.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChirAtom

The ID of an atom bonded to the chiral atom.

getAtomId() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlaneAtom

The ID of an atom involved in the plane.

getAtomId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

The identifier of the non-polymeric atom, if applicable.

getAtomId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

The identifier of the atom.

getAtomId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The atom identifier/name corresponding to this coordinate position.

getAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

The identifier for the target atom in imported component to be edited.

getAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomFeature

The identifier for the target atom to which the feature is assigned.

getAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

The atom identifier/name for the atom mapping

getAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The value of _pdbx_chem_comp_model_atom.atom_id uniquely identifies each atom in the PDBX_CHEM_COMP_MODEL_ATOM list.

getAtomId1() - Method in class org.rcsb.cif.schema.core.ChemCompBond

Index id of first atom in a bond connecting two atom sites.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The ID of the first of the three atoms that define the angle.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

The ID of the first of the two atoms that define the bond.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

The ID of the first of the four atoms that define the torsion angle.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The ID of the first of the three atoms that define the angle.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

The ID of the first of the two atoms that define the bond.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

The ID of the first of the four atoms that define the torsion angle.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The atom identifier for the first monomer partner in the cross link.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

The identifier for the first atom in the target bond in imported component.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

The ID of the first of the two atoms that define the bond.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The atom identifier for the first atom in the interaction.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The atom identifier/name for the first atom making the linkage.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The atom identifier/name for the first atom making the linkage.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The atom identifier/name in the first of the two entities containing the linkage.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The atom identifier/name in the first of the two entities containing the linkage.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The atom identifier/name in the first of the two components making the linkage.

getAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The atom identifier/name in the first of the two constituents containing the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.core.ChemCompBond

Index id of second atom in a bond connecting two atom sites.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The ID of the second of the three atoms that define the angle.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

The ID of the second of the two atoms that define the bond.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

The ID of the second of the four atoms that define the torsion angle.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The ID of the second of the three atoms that define the angle.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

The ID of the second of the two atoms that define the bond.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

The ID of the second of the four atoms that define the torsion angle.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The atom identifier for the second monomer partner in the cross link.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

The identifier for the second atom in the target bond in imported component.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

The ID of the second of the two atoms that define the bond.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The atom identifier for the second atom in the interaction.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The atom identifier/name for the second atom making the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The atom identifier/name for the second atom making the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The atom identifier/name in the second of the two entities containing the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The atom identifier/name in the second of the two entities containing the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The atom identifier/name in the second of the two components making the linkage.

getAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The atom identifier/name in the second of the two constituents containing the linkage.

getAtomId3() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The ID of the third of the three atoms that define the angle.

getAtomId3() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

The ID of the third of the four atoms that define the torsion angle.

getAtomId3() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The ID of the third of the three atoms that define the angle.

getAtomId3() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

The ID of the third of the four atoms that define the torsion angle.

getAtomId4() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

The ID of the fourth of the four atoms that define the torsion angle.

getAtomId4() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

The ID of the fourth of the four atoms that define the torsion angle.

getAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The mass number for the chemical element defined by the tag '_pdbx_nmr_chem_shift_ref.atom_type' or any of its related tags.

getAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The mass number for the specified atom.

getAtomIsotopeNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

Mass number for the atom defined by the '.Atom_type' tag with a systematic chemical shift offset.

getAtomName() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Uniquely identifies the atom within the component.

getAtomName() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of missing atom.

getAtomName() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of missing atom.

getAtomSite() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe atom site information used in crystallographic structure studies.

getAtomSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITE category record details about the atom sites in a macromolecular crystal structure, such as the positional coordinates, atomic displacement parameters, magnetic moments and directions.

getAtomSiteAniso() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the anisotropic thermal parameters of the atomic sites in a crystal structure.

getAtomSiteAnisotrop() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getAtomSiteAnisotrop() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITE_ANISOTROP category record details about anisotropic displacement parameters.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAsymId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteAuthAsymId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAsymIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteAuthAsymIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteAuthAsymIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAtomId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteAuthAtomId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthAtomIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteAuthAtomIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteAuthAtomIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthCompId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteAuthCompId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthCompIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteAuthCompIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteAuthCompIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthSeqId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteAuthSeqId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteAuthSeqIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteAuthSeqIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteAuthSeqIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.core.GeomAngle

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.core.GeomBond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.core.GeomContact

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The identifier of the first of the three atom sites that define the angle.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

The identifier of the first of the two atom sites that define the bond.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

The identifier of the first of the two atom sites that define the contact.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.core.GeomAngle

The unique identifier for the vertex atom of the angle.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.core.GeomBond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.core.GeomContact

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The identifier of the second of the three atom sites that define the angle.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

The identifier of the second of the two atom sites that define the bond.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

The identifier of the second of the two atom sites that define the contact.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.core.GeomAngle

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The identifier of the third of the three atom sites that define the angle.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteId4() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteIdA() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteIdD() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteIdH() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.GeomAngle

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.GeomBond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.GeomContact

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel1() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.GeomAngle

The unique identifier for the vertex atom of the angle.

getAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.GeomBond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.GeomContact

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel2() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel3() - Method in class org.rcsb.cif.schema.core.GeomAngle

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel3() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabel4() - Method in class org.rcsb.cif.schema.core.GeomTorsion

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabelA() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAltId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAltId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteLabelAltId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAltIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteLabelAltIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteLabelAltIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAsymId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteLabelAsymId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAsymIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteLabelAsymIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteLabelAsymIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAtomId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteLabelAtomId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelAtomIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteLabelAtomIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteLabelAtomIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelCompId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteLabelCompId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelCompIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteLabelCompIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteLabelCompIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSiteLabelD() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabelH() - Method in class org.rcsb.cif.schema.core.GeomHbond

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the first of the three atom sites that define the angle.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the first of the two atom sites that define the bond.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the first of the two atom sites that define the contact.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the first of the four atom sites that define the torsion angle.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the second of the three atom sites that define the angle.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomBond

An optional identifier of the second of the two atom sites that define the bond.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomContact

An optional identifier of the second of the two atom sites that define the contact.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the second of the four atom sites that define the torsion angle.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

An optional identifier of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getAtomSiteLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

An optional identifier of the third of the three atom sites that define the angle.

getAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the third of the four atom sites that define the torsion angle.

getAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.

getAtomSiteLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelSeqId4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle.

getAtomSiteLabelSeqId4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

An optional identifier of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getAtomSiteLabelSeqIdA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the acceptor-atom site that defines the hydrogen bond.

getAtomSiteLabelSeqIdD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the donor-atom site that defines the hydrogen bond.

getAtomSiteLabelSeqIdH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

An optional identifier of the hydrogen-atom site that defines the hydrogen bond.

getAtomSites() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe information which applies to all atom sites in a crystal structure.

getAtomSites() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITES category record details about the crystallographic cell and cell transformations, which are common to all atom sites.

getAtomSitesAlt() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITES_ALT category record details about the structural ensembles that should be generated from atom sites or groups of atom sites that are modelled in alternative conformations in this data block.

getAtomSitesAltEns() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITES_ALT_ENS category record details about the ensemble structure generated from atoms with various alternative conformation IDs.

getAtomSitesAltGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITES_ALT_GEN category record details about the interpretation of multiple conformations in the structure.

getAtomSitesCartnTransform() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the matrix elements used to transform Cartesion coordinates into fractional coordinates of all atom sites in a crystal structure.

getAtomSitesFootnote() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_SITES_FOOTNOTE category record detailed comments about an atom site or a group of atom sites.

getAtomSitesFractTransform() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the matrix elements used to transform Cartesion coordinates into fractional coordinates of all atom sites in a crystal structure.

getAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The chiral configuration of the first atom making the linkage.

getAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The chiral configuration of the first atom making the linkage.

getAtomStereoConfig1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The chiral configuration of the first atom making the linkage.

getAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The chiral configuration of the second atom making the linkage.

getAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The chiral configuration of the second atom making the linkage.

getAtomStereoConfig2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The chiral configuration of the second atom making the linkage.

getAtomType() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe atomic type information used in crystallographic structure studies.

getAtomType() - Method in class org.rcsb.cif.schema.core.Function

The function r = AtomType( s ) returns an atom type symbol (element name) from the atom site label.

getAtomType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ATOM_TYPE category record details about the properties of the atoms that occupy the atom sites, such as the atomic scattering factors.

getAtomType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The value for this tag is a standard IUPAC abbreviation for an element (i.e., H, C, P, etc).

getAtomType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

Statistics are often calculated over only some of the atoms, e.g.

getAtomType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The value for this tag is a standard IUPAC abbreviation for an element (i.e., H, C, N, P, etc).

getAtomType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

The kind of atom to which the chemical shift offset value applies.

getAtomType1() - Method in class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

The first atom type defining the bond

getAtomType2() - Method in class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

The first atom type defining the bond

getAtomTypeScat() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe atomic scattering information used in crystallographic structure studies.

getAtomTypeSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.atom_type_symbol records the name of site obtained from MAD phasing.

getAtomTypeSymbol() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

This data item is a pointer to _atom_type.symbol in the ATOM_TYPE category.

getAttachedHydrogens() - Method in class org.rcsb.cif.schema.core.AtomSite

Number of hydrogen atoms attached to the atom at this site excluding any H atoms for which coordinates (measured or calculated) are given.

getAttachedHydrogens() - Method in class org.rcsb.cif.schema.mm.AtomSite

The number of hydrogen atoms attached to the atom at this site excluding any hydrogen atoms for which coordinates (measured or calculated) are given.

getAttenuatorCode() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying any attenuator setting for this reflection.

getAttenuatorCode() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying the attenuator setting for this reflection.

getAtUnitMatrix() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

Flag indicating unit matrix

getAudit() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to record details about the creation and subsequent updating of the data block.

getAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the AUDIT category record details about the creation and subsequent updating of the data block.

getAuditAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used for author(s) details.

getAuditAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the AUDIT_AUTHOR category record details about the author(s) of the data block.

getAuditConform() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used describe dictionary versions by which data names in the current data block are conformant.

getAuditConform() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the AUDIT_CONFORM category describe the dictionary versions against which the data names appearing in the current data block are conformant.

getAuditContactAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used for contact author(s) details.

getAuditContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the AUDIT_CONTACT_AUTHOR category record details about the name and address of the author to be contacted concerning the content of this data block.

getAuditLink() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to record details about the relationships between data blocks in the current CIF.

getAuditLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the AUDIT_LINK category record details about the relationships between data blocks in the current CIF.

getAuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the current atom_site identifier labeling alternate locations.

getAuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the current atom_site identifier labeling alternate locations.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.AtomSite

An alternative identifier for _atom_site.label_asym_id that may be provided by an author in order to match the identification used in the publication that describes the structure.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.pdbx_auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

An element of the chemical component instance identifier.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The author provided chain id.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The author provided chain id.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Author instance identifier (formerly PDB Chain ID)

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Chain id of the nonstandard group used by the author.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the current atom_site identifier.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequencePattern

The identifier of the author asym_id of the strand containing the sequence pattern.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the current atom_site identifier.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the author identifier of the inserted residue.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the first of the three atom sites that define the angle.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the first of the two atom sites that define the covalent bond.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the first residue in the bond This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the first of the two atom sites that define the linkage.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the first of the three atom sites that define the angle.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the first of the two atom sites that define the covalent bond.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the second of the three atom sites that define the angle.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the second of the two atom sites that define the covalent bond.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the second residue in the bond This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the second of the two atom sites that define the linkage.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

identifier of the second of the three atom sites that define the angle.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the second of the two atom sites that define the covalent bond.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the third of the three atom sites that define the angle.

getAuthAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the third of the three atom sites that define the angle.

getAuthAsymIdList() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.AtomSite

An alternative identifier for _atom_site.label_atom_id that may be provided by an author in order to match the identification used in the publication that describes the structure.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the current atom_site identifier.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the current atom_site identifier.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.

getAuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the first of the three atom sites that define the angle.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the first of the two atom sites that define the covalent bond.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the first of the two atom sites that define the linkage.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the first of the three atom sites that define the angle.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the first of the two atom sites that define the covalent bond.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the second of the three atom sites that define the angle.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the second of the two atom sites that define the covalent bond.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the second of the two atom sites that define the linkage.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the second of the three atom sites that define the angle.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the second of the two atom sites that define the covalent bond.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the third of the three atom sites that define the angle.

getAuthAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the third of the three atom sites that define the angle.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.AtomSite

An alternative identifier for _atom_site.label_comp_id that may be provided by an author in order to match the identification used in the publication that describes the structure.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The author provided compound ID (residue name).

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The author provided compound ID (residue name).

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

The author provided chemical component identifier

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the current atom_site identifier.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the current atom_site identifier.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

PDB component ID

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

PDB component ID

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the first of the three atom sites that define the angle.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the first of the two atom sites that define the covalent bond.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the first residue in the bond This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the first of the two atom sites that define the linkage.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the first of the three atom sites that define the angle.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the first of the two atom sites that define the covalent bond.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the second of the three atom sites that define the angle.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the second of the two atom sites that define the covalent bond.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the second residue in the bond This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the second of the two atom sites that define the linkage.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the second of the three atom sites that define the angle.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the second of the two atom sites that define the covalent bond.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getAuthCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the third of the three atom sites that define the angle.

getAuthCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the third of the three atom sites that define the angle.

getAuthFileContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

The data content type for this data file within the collection.

getAuthFileFormatType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

The data format for this data file within the collection.

getAuthFileLabel() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A contributor label for this data file within the collection.

getAuthFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

The file name for this data file within the collection.

getAuthFileSize() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

The file size (bytes) for this data file within the collection.

getAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.pdbx_auth_comp_id in the ATOM_SITE category.

getAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

Author provided residue identifier.

getAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Author provided residue identifier.

getAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The monomer type found at this position in the sequence of the entity or biological unit provided by the depositor.

getAuthName() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The author-provided name of the component.

getAuthor() - Method in class org.rcsb.cif.schema.mm.EmAuthorList

Author of the EMDB entry in PDB format: Taylor, T.J.

getAuthorApprovalType() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the author's approval for an entry was received explicitly or implicitly.

getAuthorName() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The name of the person responsible for submitting this revision to the PDB.

getAuthorProvidedFlag() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

A flag to indicate if details about this chemical component instance have been provided by the depositor.

getAuthorReleaseStatusCode() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The release status authorized by the depositor.

getAuthors() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

The name of the authors of the software used in this procedure.

getAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getAuthPDBInsertId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Optional identifier of the first of the three atom sites that define the angle.

getAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

Optional identifier of the first of the two atom sites that define the covalent bond.

getAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getAuthPDBInsertId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Optional identifier of the second of the three atom sites that define the angle.

getAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

Optional identifier of the second of the two atom sites that define the covalent bond.

getAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getAuthPDBInsertId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getAuthPDBInsertId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Optional identifier of the third of the three atom sites that define the angle.

getAuthReqRelDate() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The release date requested by the depositor.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.AtomSite

An alternative identifier for _atom_site.label_seq_id that may be provided by an author in order to match the identification used in the publication that describes the structure.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

An element of the chemical component instance identifier.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The author provided residue number.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The author provided residue number.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Residue number of the nonstandard group used by the author.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the current atom_site identifier.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the current atom_site identifier.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

PDB position in the sequence.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

PDB position in the sequence.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The monomer position in the author provided sequence.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the author identifier of the inserted residue.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

Part of the identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

Part of the identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the first of the three atom sites that define the angle.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the first of the two atom sites that define the covalent bond.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the first residue in the bond This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the first of the two atom sites that define the linkage.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the first of the three atom sites that define the angle.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the first of the two atom sites that define the covalent bond.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the first of the two atom sites that define the close contact.

getAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the second of the three atom sites that define the angle.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

identifier of the second of the two atom sites that define the covalent bond.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Part of the identifier of the second residue in the bond This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Part of the identifier of the second of the two atom sites that define the linkage.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the second of the three atom sites that define the angle.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Part of the identifier of the second of the two atom sites that define the covalent bond.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Part of the identifier of the second of the two atom sites that define the close contact.

getAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

Identifier of the third of the three atom sites that define the angle.

getAuthSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Part of the identifier of the third of the three atom sites that define the angle.

getAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.pdbx_auth_seq_id in the ATOM_SITE category.

getAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Author provided residue number.

getAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

Author provided residue numbering.

getAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Author provided residue number.

getAverageConstraintsPerResidue() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The average number of constraints per residue for the ensemble

getAverageConstraintViolationsPerResidue() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The average number of constraint violations on a per residue basis for the ensemble.

getAverageDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The average distance restraint violation for the ensemble.

getAverageExposureTime() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The average exposure time for each image.

getAverageTorsionAngleConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The average torsion angle constraint violation for the ensemble.

getAvgElectronDosePerImage() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The electron dose received by the specimen per image (electrons per square angstrom).

getAvgNumImagesPerClass() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

The average number of images per class in the final 2D classification

getAvREq() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Residual [sum av|del(I)|/sum|av(I)|] for symmetry-equivalent reflections used to calculate the average intensity av(I).

getAvREq() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

For each reflection class, the residual [sum av|del(I)|/sum|av(I)|] for symmetry-equivalent reflections used to calculate the average intensity av(I).

getAvREquivalents() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The residual [sum av|del(I)| / sum |av(I)|] for symmetry-equivalent reflections used to calculate the average intensity av(I).

getAvREquivalents() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The residual [sum|avdel(I)| / sum|av(I)|] for symmetry-equivalent reflections used to calculate the average intensity av(I).

getAvSgI_I() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Recorded [sum|su(net I)|/sum|net I|] in a reflection class.

getAvSgI_I() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

Measure [sum|sigma(net I)|/sum|net I|] for all measured intensities in a reflection class.

getAvSigmaIOverNetI() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Recorded [sum |su(netI)| / sum |netI|] for all measured reflections.

getAvSigmaIOverNetI() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

Measure [sum|sigma(I)|/sum|net(I)|] for all measured reflections.

getAvSuIOverI() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Recorded [sum|su(net I)|/sum|net I|] in a reflection class.

getAvSunetIOverNetI() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Recorded [sum |su(netI)| / sum |netI|] for all measured reflections.

getAvUI_I() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Recorded [sum|su(net I)|/sum|net I|] in a reflection class.

getAvUI_I() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

Measure [sum|u(net I)|/sum|net I|] for all measured intensities in a reflection class.

getAvUnetI_netI() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Recorded [sum |su(netI)| / sum |netI|] for all measured reflections.

getAvUnetI_netI() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

Measure [sum u(net I)|/sum|net I|] for all measured reflections.

getAxes() - Method in class org.rcsb.cif.schema.core.AtomSites

Description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites_Cartn_transform.matrix.

getAxes() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites_Cartn_transform.matrix.

getAxes() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites_fract_transform.matrix.

getAxialRisePerSubunit() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

The axial rise per subunit in the helical assembly.

getAxialSymmetry() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

Symmetry of the helical axis, either cyclic (Cn) or dihedral (Dn), where n>=1.

getAxis1AngleIncrement() - Method in class org.rcsb.cif.schema.mm.EmTomography

The angle increment of specimen tilting to obtain the recorded images (axis 1).

getAxis1MaxAngle() - Method in class org.rcsb.cif.schema.mm.EmTomography

The maximum angle at which the specimen was tilted to obtain recorded images (axis 1).

getAxis1MinAngle() - Method in class org.rcsb.cif.schema.mm.EmTomography

The minimum angle at which the specimen was tilted to obtain recorded images (axis 1).

getAxis2AngleIncrement() - Method in class org.rcsb.cif.schema.mm.EmTomography

The angle increment of specimen tilting to obtain the recorded images (axis 1).

getAxis2MaxAngle() - Method in class org.rcsb.cif.schema.mm.EmTomography

The maximum angle at which the specimen was tilted to obtain recorded images (axis 1).

getAxis2MinAngle() - Method in class org.rcsb.cif.schema.mm.EmTomography

The minimum angle at which the specimen was tilted to obtain recorded images (axis 1).

getAxisOrderFast() - Method in class org.rcsb.cif.schema.mm.EmMap

The map axis that corresponds to Columns.

getAxisOrderMedium() - Method in class org.rcsb.cif.schema.mm.EmMap

The map axis that corresponds to Rows.

getAxisOrderSlow() - Method in class org.rcsb.cif.schema.mm.EmMap

The map axis that corresponds to Sections.

getAxisType() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectAxis

The type of axis.

getB() - Method in class org.rcsb.cif.schema.core.ValenceParam

The bond valence parameter B used in the expression s = exp[(Ro - R)/B] where s is the valence of bond length R.

getB() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell length B

getB() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The bond-valence parameter B used in the expression s = exp[(Ro - R)/B] where s is the valence of a bond of length R.

getB11() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB11() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB11() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB11() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB11Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB11Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB11Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB11Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB11Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB11Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB12() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB12() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB12() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB12() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB12Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB12Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB12Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB12Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB12Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB12Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB13() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB13() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB13() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB13() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB13Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB13Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB13Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB13Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB13Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB13Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB22() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB22() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB22() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB22() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB22Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB22Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB22Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB22Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB22Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB22Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB23() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB23() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB23() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB23() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB23Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB23Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB23Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB23Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB23Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB23Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB33() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB33() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB33() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-1/4 sum~i~ [ sum~j~ (B^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getB33() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the anisotropic atomic displacement matrix B, which appears in the structure-factor term as: T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getB33Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB33Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB33Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB33Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.B.

getB33Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getB33Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Bij anisotropic atomic displacement components (see _aniso_BIJ.

getBCalc() - Method in class org.rcsb.cif.schema.core.Refln

The calculated imaginary structure-factor component B =|Fcalc|sin(phase)

getBCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of structure-factor component B in electrons.

getBCalcAu() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of structure-factor component B in arbitrary units.

getBeamPositionX() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The sample position in the beam in the X direction.

getBeamPositionY() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The sample position in the beam in the Y direction.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range begins.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Monomer ID at the initial position in the PDB sequence segment.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range begins.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Initial position in the PDB sequence segment.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegDbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

The begining monomer type found at the starting position in the referenced database entry.

getBegDbSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

The begining monomer sequence position in the referenced database entry.

getBeginInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Insertion code.

getBeginMonId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

The value of _pdbx_entity_poly_domain.begin_mon_id identifies the monomer at the beginning of the domain.

getBeginResNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

First residue number.

getBeginSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

The value of _pdbx_entity_poly_domain.begin_seq_num identifies the sequence position of the beginning of the domain.

getBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain begins.

getBegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range begins.

getBegPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Initial insertion code of the PDB sequence segment.

getBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range begins.

getBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getBegSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The beginning polymer sequence position for the polymer section corresponding to this source.

getBegSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Initial position in the sequence segment.

getBEquivGeomMean() - Method in class org.rcsb.cif.schema.core.AtomSite

Equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getBEquivGeomMean() - Method in class org.rcsb.cif.schema.mm.AtomSite

Equivalent isotropic atomic displacement parameter, B~eq~, in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getBEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the Equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getBEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.B_equiv_geom_mean.

getBEquivGeomMeanSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the Equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getBeta() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell angle beta.

getBeta() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle beta (P-O5'-C5'-C4').

getBetaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getBetaSu() - Method in class org.rcsb.cif.schema.core.CellAngle

Standard uncertainty of the angle between the bounding cell axes.

getBetaTolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell angle beta.

getBindingPartnerAsymId() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

An asym/strand identifier for the binding partner at the interface, if applicable.

getBindingPartnerEntityId() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

The entity identifier of the binding partner at the interface.

getBindModeId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncEnzyme

This data item is pointer to _pdbx_entity_func_bind_mode.id in the PDBX_ENTITY_FUNC_BIND_MODE category.

getBindModeId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncOther

This data item is pointer to _pdbx_entity_func_bind_mode.id in the PDBX_ENTITY_FUNC_BIND_MODE category.

getBindModeId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncRegulatory

This data item is pointer to _pdbx_entity_func_bind_mode.id in the PDBX_ENTITY_FUNC_BIND_MODE category.

getBindModeId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncStructural

This data item is pointer to _pdbx_entity_func_bind_mode.id in the PDBX_ENTITY_FUNC_BIND_MODE category.

getBiolId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityAssembly

An identifier for the assembly.

getBiolId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

The identifier for the assembly used in category PDBX_STRUCT_ASSEMBLY.

getBiolId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

The identifier for the assembly used in category STRUCT_BIOL.

getBiolId() - Method in class org.rcsb.cif.schema.mm.PdbxStructBiolFunc

This data item is a pointer to _struct_biol.id in the STRUCT_BIOL category.

getBiolId() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

This data item is a pointer to _struct_biol.id in the STRUCT_BIOL category.

getBiolId() - Method in class org.rcsb.cif.schema.mm.StructBiolKeywords

This data item is a pointer to _struct_biol.id in the STRUCT_BIOL category.

getBiolId() - Method in class org.rcsb.cif.schema.mm.StructBiolView

This data item is a pointer to _struct_biol.id in the STRUCT_BIOL category.

getBiolId() - Method in class org.rcsb.cif.schema.mm.StructRef

This data item is a pointer to _struct_biol.id in the STRUCT_BIOL category.

getBIso() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.b_iso records isotropic temperature factor parameterthe for the site obtained from MAD phasing.

getBIso() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The average isotropic B factors for the group of atoms (e.g.

getBIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

Isotropic displacement parameter for this heavy-atom site in this derivative.

getBIsoEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.b_iso_esd records estimated standard deviation of isotropic temperature factor parameterthe for the site obtained from MAD phasing.

getBIsoEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.B_iso.

getBIsoMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The average isotropic B factors for the group of atoms (e.g.

getBisoMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The maximum isotropic B factor reported in the model file.

getBIsoMax() - Method in class org.rcsb.cif.schema.mm.Refine

The maximum isotropic displacement parameter (B value) found in the coordinate set.

getBisoMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The occupancy weighted mean isotropic B factor reported in the model file.

getBisoMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The occupancy weighted average isotropic B factors for the residue.

getBisoMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The occupancy weighted average isotropic B factors for the residue.

getBIsoMean() - Method in class org.rcsb.cif.schema.mm.Refine

The mean isotropic displacement parameter (B value) for the coordinate set.

getBisoMeanMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The occupancy weighted average isotropic B factors for the main chain atoms.

getBisoMeanPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The occupancy weighted average isotropic B factors for the phosphate atoms.

getBisoMeanSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The occupancy weighted average isotropic B factors for the side chain atoms.

getBisoMin() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The minimum isotropic B factor reported in the model file.

getBIsoMin() - Method in class org.rcsb.cif.schema.mm.Refine

The minimum isotropic displacement parameter (B value) found in the coordinate set.

getBIsoOrEquiv() - Method in class org.rcsb.cif.schema.core.AtomSite

Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated from anisotropic temperature factor parameters.

getBIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.AtomSite

Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, B~eq~, calculated from the anisotropic displacement parameters.

getBIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The isotropic temperature factor corresponding to this coordinate position.

getBIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated from anisotropic temperature factor parameters.

getBIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.B_iso_or_equiv.

getBIsoOrEquivSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, B(equiv), in angstroms squared, calculated from anisotropic temperature factor parameters.

getBIsoSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The average isotropic B factors for the group of atoms (e.g.

getBIsoWilsonEstimate() - Method in class org.rcsb.cif.schema.mm.Reflns

The value of the overall isotropic displacement parameter estimated from the slope of the Wilson plot.

getBlockCode() - Method in class org.rcsb.cif.schema.core.Audit

A unique block code identifier for each revision.

getBlockCode() - Method in class org.rcsb.cif.schema.core.AuditLink

The value of _audit.block_code associated with a data block in the current file related to the current data block.

getBlockCode() - Method in class org.rcsb.cif.schema.mm.AuditLink

The value of _audit_block.code associated with a data block in the current file related to the current data block.

getBlockDescription() - Method in class org.rcsb.cif.schema.core.AuditLink

Description of the relationship of the referenced data block to the current one.

getBlockDescription() - Method in class org.rcsb.cif.schema.mm.AuditLink

A textual description of the relationship of the referenced data block to the current one.

getBlockDoi() - Method in class org.rcsb.cif.schema.core.Audit

The digital object identifier (DOI) registered to identify the data set publication represented by the current datablock.

getBlockHeader() - Method in class org.rcsb.cif.model.binary.BinaryBlock

getBlockHeader() - Method in interface org.rcsb.cif.model.Block

The header of this Block.

getBlockHeader() - Method in interface org.rcsb.cif.model.BlockBuilder

The header of this block.

getBlockHeader() - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

getBlockHeader() - Method in class org.rcsb.cif.model.text.TextBlock

getBlockHeader() - Method in class org.rcsb.cif.schema.DelegatingBlock

getBlocks() - Method in class org.rcsb.cif.model.binary.BinaryFile

getBlocks() - Method in interface org.rcsb.cif.model.CifFile

Access to all blocks of this file.

getBlocks() - Method in class org.rcsb.cif.model.text.TextFile

getBlocks() - Method in class org.rcsb.cif.schema.DelegatingCifFile

getBlue() - Method in class org.rcsb.cif.schema.core.DisplayColour

Integer value between 0 and 255 giving the intensity of a specific colour component (red, green or blue) for the RGB display colour code.

getBmean_Bwilson() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The difference between the isotropic B factor and the Bfators from Wilson plot.

getBMeas() - Method in class org.rcsb.cif.schema.core.Refln

The measured imaginary structure-factor component B =|Fmeas|sin(phase)

getBMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of structure-factor component B in electrons.

getBMeasAu() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of structure-factor component B in arbitrary units.

getBond() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

The value of the bond distance deviating by more than 6*RMSD from the standard dictionary value.

getBondAngleRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The bond angle rmsd to the target values for the ensemble.

getBondAngleRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error in the bond angle rmsd.

getBondDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

The value of the deviation from ideal for the defined covalent bond for the two atoms defined.

getBondDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The value of the deviation from ideal for the defined covalent bond for the two atoms defined.

getBondDistanceIncr() - Method in class org.rcsb.cif.schema.core.Geom

Increment added to the bond radii for the atomic species to specify the maximum permitted "bonded" distance between two atom sites.

getBondDistanceMin() - Method in class org.rcsb.cif.schema.core.Geom

Minimum permitted "bonded" distance between two atom sites.

getBondLigandMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for bond lengths (ligand only).

getBondLigandRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for bond lengths (ligand only).

getBondOverallMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for bond lengths (all atoms).

getBondOverallRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for bond lengths (all atoms).

getBondStandardDeviation() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The uncertaintiy in target value of the bond length expressed as a standard deviation.

getBondTargetValue() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The target value of the bond length

getBondType() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Bond type.

getBondValue() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The value of the bond length

getBookIdISBN() - Method in class org.rcsb.cif.schema.core.Citation

International Standard Book Number (ISBN) for book chap.

getBookIdISBN() - Method in class org.rcsb.cif.schema.mm.Citation

The International Standard Book Number (ISBN) code assigned to the book cited; relevant for books or book chapters.

getBookPublisher() - Method in class org.rcsb.cif.schema.core.Citation

Publisher of the citation; relevant for book chapters.

getBookPublisher() - Method in class org.rcsb.cif.schema.mm.Citation

The name of the publisher of the citation; relevant for books or book chapters.

getBookPublisherCity() - Method in class org.rcsb.cif.schema.core.Citation

Location of publisher of the citation; relevant for book chapters.

getBookPublisherCity() - Method in class org.rcsb.cif.schema.mm.Citation

The location of the publisher of the citation; relevant for books or book chapters.

getBookTitle() - Method in class org.rcsb.cif.schema.core.Citation

Title of the book in which the citation appeared.

getBookTitle() - Method in class org.rcsb.cif.schema.mm.Citation

The title of the book in which the citation appeared; relevant for books or book chapters.

getBravaisType() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The symbol denoting the lattice type (Bravais type) to which the translational subgroup (vector lattice) of the space group belongs.

getBSolvent() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

One of the scale factors used in the bulk solvent correction (from REFMAC).

getBTolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell length B

getBuckle() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair buckle parameter.

getBufferId() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

Foreign key to the entry category.

getBufferId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

This data item is a pointer to _em_buffer.id in the BUFFER category.

getBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

This data item is a pointer to _pdbx_buffer.id in the BUFFER category.

getBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getBufferName() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The name of the buffer used for the sample in the solution scattering experiment.

getBufferVolume() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The volume in milliliters of buffer in which the lysis was performed.

getBWilson() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The estimated B factor from the structure factor file by the Wilson plot (from Xtriage).

getBWilsonScale() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The scale factor for calculating the B factor by the Wilson plot (from Xtriage).

getC() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell length C

getC1C2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_c2 covalent element of this monomer.

getC1C2C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_c2_c3 covalent element of this monomer.

getC1C2C3C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_c2_c3_c4 covalent element of this monomer.

getC1N19C24() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_n1_9_c2_4 covalent element of this monomer.

getC1N19C68() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_n1_9_c6_8 covalent element of this monomer.

getC1N91() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c1_n9_1 covalent element of this monomer.

getC2ApertureDiameter() - Method in class org.rcsb.cif.schema.mm.EmImaging

The open diameter of the c2 condenser lens, in microns.

getC2C1N19() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c2_c1_n1_9 covalent element of this monomer.

getC2C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c2_c3 covalent element of this monomer.

getC2C3C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c2_c3_c4 covalent element of this monomer.

getC2C3C4O4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c2_c3_c4_o4 covalent element of this monomer.

getC2C3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c2_c3_o3 covalent element of this monomer.

getC3C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_c4 covalent element of this monomer.

getC3C4O4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_c4_o4 covalent element of this monomer.

getC3C4O4C1() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_c4_o4_c1 covalent element of this monomer.

getC3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_o3 covalent element of this monomer.

getC3O3P() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_o3_p covalent element of this monomer.

getC3O3PO5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c3_o3_p_o5 covalent element of this monomer.

getC4C3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_c3_o3 covalent element of this monomer.

getC4C3O3P() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_c3_o3_p covalent element of this monomer.

getC4O4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_o4 covalent element of this monomer.

getC4O4C1() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_o4_c1 covalent element of this monomer.

getC4O4C1C2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_o4_c1_c2 covalent element of this monomer.

getC4O4C1N19() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c4_o4_c1_n1_9 covalent element of this monomer.

getC5C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c5_c4 covalent element of this monomer.

getC5C4C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c5_c4_c3 covalent element of this monomer.

getC5C4C3C2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c5_c4_c3_c2 covalent element of this monomer.

getC5C4C3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c5_c4_c3_o3 covalent element of this monomer.

getC5C4O4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The c5_c4_o4 covalent element of this monomer.

getCalcAttachedAtom() - Method in class org.rcsb.cif.schema.core.AtomSite

The _atom_site.label of the atom site to which the 'geometry- calculated' atom site is attached.

getCalcAttachedAtom() - Method in class org.rcsb.cif.schema.mm.AtomSite

The _atom_site.id of the atom site to which the 'geometry-calculated' atom site is attached.

getCalcFlag() - Method in class org.rcsb.cif.schema.core.AtomSite

A standard code to signal if the site coordinates have been determined from the intensities or calculated from the geometry of surrounding sites, or have been assigned dummy coordinates.

getCalcFlag() - Method in class org.rcsb.cif.schema.mm.AtomSite

A standard code to signal whether the site coordinates have been determined from the intensities or calculated from the geometry of surrounding sites, or have been assigned dummy values.

getCalibratedDefocusMax() - Method in class org.rcsb.cif.schema.mm.EmImaging

The maximum defocus value of the objective lens (in nanometers) used to obtain the recorded images.

getCalibratedDefocusMin() - Method in class org.rcsb.cif.schema.mm.EmImaging

The minimum defocus value of the objective lens (in nanometers) used to obtain the recorded images.

getCalibratedMagnification() - Method in class org.rcsb.cif.schema.mm.EmImaging

The magnification value obtained for a known standard just prior to, during or just after the imaging experiment.

getCameraLength() - Method in class org.rcsb.cif.schema.mm.EmDiffraction

getCarbonShiftsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A value indicating if 13C chemical shifts are being deposited and if IUPAC chemical shift referencing was used.

getCarrierSolvent() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the carrier buffer used to move the sample into the beam.

getCartnTransfMatrix11() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix12() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix13() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix21() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix22() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix23() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix31() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix32() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfMatrix33() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransformAxes() - Method in class org.rcsb.cif.schema.core.AtomSites

Description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites_Cartn_transform.matrix.

getCartnTransformAxes() - Method in class org.rcsb.cif.schema.mm.AtomSites

A description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites.Cartn_transf_matrix[][].

getCartnTransfVector1() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfVector1() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfVector2() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfVector2() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnTransfVector3() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getCartnTransfVector3() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates in the same category.

getCartnX() - Method in class org.rcsb.cif.schema.core.AtomSite

The atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnX() - Method in class org.rcsb.cif.schema.mm.AtomSite

The x atom-site coordinate in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the description given in _atom_sites.Cartn_transform_axes.

getCartnX() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

The Cartesian X component corresponding to this pseudo site.

getCartnX() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The Cartesian X component corresponding to this sphere object.

getCartnX() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The Cartesian X component corresponding to this coordinate position.

getCartnX() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_x records the X Cartesian coordinate of site obtained from MAD phasing.

getCartnX() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The x atom-site coordinate of the solvent position in angstroms.

getCartnX() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The x coordinate of this heavy-atom position in this derivative specified as orthogonal angstroms.

getCartnXEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnXEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.Cartn_x.

getCartnXEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_x_esd records the estimated standard deviation X Cartesian coordinate of site obtained from MAD phasing.

getCartnXEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.Cartn_x.

getCartnXSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnXyz() - Method in class org.rcsb.cif.schema.core.AtomSite

Vector of Cartesian (orthogonal angstrom) atom site coordinates.

getCartnXyz() - Method in class org.rcsb.cif.schema.core.ModelSite

Vector of Cartesian (orthogonal angstrom) atom site coordinates.

getCartnY() - Method in class org.rcsb.cif.schema.core.AtomSite

The atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnY() - Method in class org.rcsb.cif.schema.mm.AtomSite

The y atom-site coordinate in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the description given in _atom_sites.Cartn_transform_axes.

getCartnY() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

The Cartesian Y component corresponding to this pseudo site.

getCartnY() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The Cartesian Y component corresponding to this sphere object.

getCartnY() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The Cartesian Y component corresponding to this coordinate position.

getCartnY() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_y records the Y Cartesian coordinate of site obtained from MAD phasing.

getCartnY() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The y atom-site coordinate of the solvent position in angstroms.

getCartnY() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The y coordinate of this heavy-atom position in this derivative specified as orthogonal angstroms.

getCartnYEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnYEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.Cartn_y.

getCartnYEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_y_esd records the estimated standard deviation Y Cartesian coordinate of site obtained from MAD phasing.

getCartnYEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.Cartn_y.

getCartnYSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnZ() - Method in class org.rcsb.cif.schema.core.AtomSite

The atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.AtomSite

The z atom-site coordinate in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the description given in _atom_sites.Cartn_transform_axes.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

The Cartesian Z component corresponding to this pseudo site.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The Cartesian Z component corresponding to this sphere object.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The Cartesian Z component corresponding to this coordinate position.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_z records the Z Cartesian coordinate of site obtained from MAD phasing.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The z atom-site coordinate of the solvent position in angstroms.

getCartnZ() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The z coordinate of this heavy-atom position in this derivative specified as orthogonal angstroms.

getCartnZEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCartnZEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.Cartn_z.

getCartnZEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.Cartn_z_esd records the estimated standard deviation Z Cartesian coordinate of site obtained from MAD phasing.

getCartnZEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.Cartn_z.

getCartnZSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values of the atom site coordinates in angstroms specified according to a set of orthogonal Cartesian axes related to the cell axes as specified by the _atom_sites_Cartn_transform.axes description.

getCAS() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Chemical Abstracts Service.

getCAS() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by the Chemical Abstracts Service.

getCassetteRotX() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The cassette rotation about the X axis.

getCassetteRotY() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The cassette rotation about the Y axis.

getCassetteRotZ() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The cassette rotation about the Z axis.

getCategories() - Method in class org.rcsb.cif.model.binary.BinaryBlock

getCategories() - Method in interface org.rcsb.cif.model.Block

Access to the category map wrapped by this block.

getCategories() - Method in interface org.rcsb.cif.model.BlockBuilder

The category map of this builder (and Block about to be created).

getCategories() - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

getCategories() - Method in class org.rcsb.cif.model.text.TextBlock

getCategories() - Method in class org.rcsb.cif.schema.DelegatingBlock

getCategory() - Method in class org.rcsb.cif.schema.core.Publ

The category of paper submitted.

getCategory() - Method in class org.rcsb.cif.schema.core.PublRequested

The category of paper submitted.

getCategory() - Method in class org.rcsb.cif.schema.mm.EmSoftware

The purpose of the software.

getCategory() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

The category updated in the pdbx_audit_revision_category record.

getCategory(String) - Method in class org.rcsb.cif.model.binary.BinaryBlock

getCategory(String) - Method in interface org.rcsb.cif.model.Block

Retrieve a particular Category by name.

getCategory(String) - Method in class org.rcsb.cif.model.text.TextBlock

getCategory(String) - Method in class org.rcsb.cif.schema.DelegatingBlock

getCategory(String, Function<Category, C>) - Method in interface org.rcsb.cif.model.Block

'Type-safe' access to arbitrary categories.

getCategoryId() - Method in class org.rcsb.cif.schema.mm.PdbxViewCategory

The mmCIF category identifier.

getCategoryId() - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

A pointer to the category_id in the PDBX_VIEW_CATEGORY category.

getCategoryName() - Method in class org.rcsb.cif.EncodingStrategyHint

The category this hint refers to.

getCategoryName() - Method in class org.rcsb.cif.model.binary.BinaryCategory

getCategoryName() - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

getCategoryName() - Method in class org.rcsb.cif.model.builder.ColumnBuilderImpl

getCategoryName() - Method in class org.rcsb.cif.model.Category.EmptyCategory

getCategoryName() - Method in interface org.rcsb.cif.model.Category

The name of this Category.

getCategoryName() - Method in interface org.rcsb.cif.model.CategoryBuilder

The name of this category.

getCategoryName() - Method in interface org.rcsb.cif.model.ColumnBuilder

The name of the parent category.

getCategoryName() - Method in class org.rcsb.cif.model.text.TextCategory

getCategoryName() - Method in class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

getCategoryName() - Method in class org.rcsb.cif.schema.DelegatingCategory

getCategoryViewName() - Method in class org.rcsb.cif.schema.mm.PdbxViewCategory

An alias name for the mmCIF category in this view.

getCbetaDeviations() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Number of Cbeta deviations >0.25A.

getCell() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the parameters of the crystal unit cell and their measurement.

getCell() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The cell type from which the component was obtained.

getCell() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

The cell of the host organism from which the expressed component was obtained, if relevant.

getCell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CELL category record details about the crystallographic cell parameters.

getCellA() - Method in class org.rcsb.cif.schema.mm.EmMap

Map unit cell length parameter a.

getCellAlpha() - Method in class org.rcsb.cif.schema.mm.EmMap

Value of map unit cell angle parameter alpha in degrees.

getCellAngle() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getCellAngleAlpha() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell angle alpha for this data set in degrees.

getCellAngleBeta() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell angle beta for this data set in degrees.

getCellAngleGamma() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell angle gamma for this data set in degrees.

getCellB() - Method in class org.rcsb.cif.schema.mm.EmMap

Map unit cell length parameter b.

getCellBeta() - Method in class org.rcsb.cif.schema.mm.EmMap

Value of map unit cell angle parameter beta in degrees.

getCellC() - Method in class org.rcsb.cif.schema.mm.EmMap

Map unit cell length parameter c.

getCellGamma() - Method in class org.rcsb.cif.schema.mm.EmMap

Value of map unit cell angle parameter gamma in degrees.

getCellLengthA() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell length a for this data set in angstroms.

getCellLengthB() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell length b for this data set in angstroms.

getCellLengthC() - Method in class org.rcsb.cif.schema.mm.PhasingSet

Unit-cell length c for this data set in angstroms.

getCellMeasurement() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the angles between the axes in the crystal unit cell.

getCellMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CELL_MEASUREMENT category record details about the measurement of the crystallographic cell parameters.

getCellMeasurementRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the reflection data used in the measurement of the crystal unit cell.

getCellMeasurementRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CELL_MEASUREMENT_REFLN category record details about the reflections used to determine the crystallographic cell parameters.

getCellRefinement() - Method in class org.rcsb.cif.schema.core.Computing

Brief description of software used for cell refinement.

getCellRefinement() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for cell refinement.

getCellSetting() - Method in class org.rcsb.cif.schema.core.Symmetry

This dataname should not be used and is DEPRECATED as it is ambiguous.

getCellSetting() - Method in class org.rcsb.cif.schema.mm.Symmetry

The cell settings for this space-group symmetry.

getCellularLocation() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The cellular location of the component.

getCenterFrequencyOffset() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The center frequency offset for the spectral dimension specified.

getCenterId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

Identifier to the description of the center.

getCenterId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

Identifier to the description of the center.

getCentringType() - Method in class org.rcsb.cif.schema.core.SpaceGroup

Symbol for the lattice centring.

getChainAtomsYP() - Method in class org.rcsb.cif.schema.mm.PdbxCoord

Gives information if the coordinates for the main chain atoms are available.

getChainId() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Chain id.

getChainId() - Method in class org.rcsb.cif.schema.mm.PdbxUnpair

Strand id.

getChainIdList() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

This data item is the author provided chain names for the assembly This item may be expressed as a comma separated list of identifiers.

getChainRangeBegin() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The beginning chain id.

getChainRangeEnd() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The ending chain id:

getChamberTemperature() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The temperature (in degrees Kelvin) of the sample just prior to vitrification.

getCharge() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

The net integer charge assigned to this atom.

getCharge() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The net integer charge assigned to this atom.

getCharge() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The net integer charge assigned to this atom.

getCharge() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The net integer charge assigned to this atom.

getCharge() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Charge

getChemComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP category give details about each of the chemical components from which the relevant chemical structures can be constructed, such as name, mass or charge.

getChemCompAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_ANGLE category record details about angles in a chemical component.

getChemCompAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_ATOM category record details about the atoms in a chemical component.

getChemCompBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getChemCompBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_BOND category record details about the bonds between atoms in a chemical component.

getChemCompChir() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_CHIR category provide details about the chiral centres in a chemical component.

getChemCompChirAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_CHIR_ATOM category enumerate the atoms bonded to a chiral atom within a chemical component.

getChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

The chemical descriptor of the polymeric residue conjugate with the probe.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

For non-polymer entities, the identifier corresponding to the chemical definition for the molecule.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySubcomponents

For entities represented as single molecules, the identifier corresponding to the chemical definition for the molecule.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

For entities represented as single molecules, the identifier corresponding to the chemical definition for the molecule.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

For entities represented as single molecules, the identifier corresponding to the chemical definition for the molecule.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

For entities represented as single molecules, the identifier corresponding to the chemical definition for the molecule.

getChemCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

For entities represented as single molecules, the identifier corresponding to the chemical definition for the molecule.

getChemCompLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_LINK category give details about the links between chemical components.

getChemCompPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_PLANE category provide identifiers for the planes in a chemical component.

getChemCompPlaneAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_PLANE_ATOM category enumerate the atoms in a plane within a chemical component.

getChemCompTor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_TOR category record details about the torsion angles in a chemical component.

getChemCompTorValue() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_TOR_VALUE category record details about the target values for the torsion angles enumerated in the CHEM_COMP_TOR list.

getChemical() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which describe the composition and chemical properties of the compound under study.

getChemical() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEMICAL category would not in general be used in a macromolecular CIF.

getChemicalConnAtom() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which describe the 2D chemical structure of the molecular species.

getChemicalConnAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEMICAL_CONN_ATOM category would not, in general, be used in a macromolecular CIF.

getChemicalConnBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the connections between the atoms sites in the chemical_conn_atom list and the nature of the chemical bond between these atoms.

getChemicalConnBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEMICAL_CONN_BOND category would not, in general, be used in a macromolecular CIF.

getChemicalConnNumber() - Method in class org.rcsb.cif.schema.core.AtomSite

This number links an atom site to the chemical connectivity list.

getChemicalConnNumber() - Method in class org.rcsb.cif.schema.mm.AtomSite

This data item is a pointer to _chemical_conn_atom.number in the CHEMICAL_CONN_ATOM category.

getChemicalFormula() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the composition and chemical properties of the compound.

getChemicalFormula() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEMICAL_FORMULA category would not, in general, be used in a macromolecular CIF.

getChemicalName() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The chemical name of the component.

getChemLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK category give details about the links between chemical components.

getChemLinkAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_ANGLE category record details about angles in a link between chemical components.

getChemLinkBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_BOND category record details about bonds in a link between components in the chemical structure.

getChemLinkChir() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_CHIR category provide details about the chiral centres in a link between two chemical components.

getChemLinkChirAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_CHIR_ATOM category enumerate the atoms bonded to a chiral atom in a link between two chemical components.

getChemLinkPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_PLANE category provide identifiers for the planes in a link between two chemical components.

getChemLinkPlaneAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_PLANE_ATOM category enumerate the atoms in a plane in a link between two chemical components.

getChemLinkTor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_TOR category record details about the torsion angles in a link between two chemical components.

getChemLinkTorValue() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_LINK_TOR_VALUE category record details about the target values for the torsion angles enumerated in the CHEM_LINK_TOR list.

getChemShift13CErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 13C chemical shifts reported in the chemical shift list.

getChemShift15NErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 15N chemical shifts reported in the chemical shift list.

getChemShift19FErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 19F chemical shifts reported in the chemical shift list.

getChemShift1HErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 1H chemical shifts reported in the chemical shift list.

getChemShift2HErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 2H chemical shifts reported in the chemical shift list.

getChemShift31PErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The value assigned as the error for all 31P chemical shifts reported in the chemical shift list.

getChemShiftReferenceId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Pointer to '_pdbx_nmr_chem_shift_reference.id'

getChemShiftReferenceId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Pointer to '_pdbx_nmr_chem_shift_reference.id'

getChemShiftUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Units for the chemical shift value assigned to the atoms of the chemical shift reference.

getChemShiftVal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Value assigned to the chemical shift of the reference compound.

getChi1() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar-base torsion angle chi1 (O4'-C1'-N1-C2).

getChi1() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the side-chain torsion angle chi1, for those residues containing such an angle.

getChi2() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar-base torsion angle chi2 (O4'-C1'-N9-C4).

getChi2() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the side-chain torsion angle chi2, for those residues containing such an angle.

getChi3() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the side-chain torsion angle chi3, for those residues containing such an angle.

getChi4() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the side-chain torsion angle chi4, for those residues containing such an angle.

getChi5() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the side-chain torsion angle chi5, for those residues containing such an angle.

getChiralCenterAtomAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of chiral center atom alt ID.

getChiralCenterAtomName() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of chiral center atom.

getChiralityOverallMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for chirality (all atoms).

getChiralityOverallRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for chirality (all atoms).

getChiralNeighborAtomAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of chiral neighbor alt ID.

getChiralNeighborAtomName() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of chiral neighbor atom.

getChirId() - Method in class org.rcsb.cif.schema.mm.ChemCompChirAtom

This data item is a pointer to _chem_comp_chir.id in the CHEM_COMP_CHIR category.

getChirId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChirAtom

This data item is a pointer to _chem_link_chir.id in the CHEM_LINK_CHIR category.

getChiSquared() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The overall Chi-squared statistic for the resolution shell.

getChiValue() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

The chi value resulting from fitting the model to the EPR data.

getChiValue() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

The chi value resulting from fitting the model to the SAS data.

getChrAberrationCorrector() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

Chromatic aberration corrector information

getCifCore() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CIF_CORE group contains the definitions of data items that are common to all domains of crystallographic studies.

getCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Rotational n-fold symmetry about the helical axis.

getCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Rotational n-fold symmetry about the helical axis.

getCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetry

Rotational n-fold C and D point symmetry.

getCircularSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

Rotational n-fold C and D point symmetry.

getCitation() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Data items in the CITATION category record details about the literature cited as being relevant to the contents of the data block.

getCitation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CITATION category record details about the literature cited as being relevant to the contents of the data block.

getCitationAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items describing citation author(s) details.

getCitationAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CITATION_AUTHOR category record details about the authors associated with the citations in the CITATION list.

getCitationEditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items describing citation editor(s) details.

getCitationEditor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CITATION_EDITOR category record details about the editors associated with the books or book chapters cited in the CITATION list.

getCitationId() - Method in class org.rcsb.cif.schema.core.CitationAuthor

Code identifier in the CITATION data list.

getCitationId() - Method in class org.rcsb.cif.schema.core.CitationEditor

Code identifier in the CITATION list.

getCitationId() - Method in class org.rcsb.cif.schema.mm.CitationAuthor

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.CitationEditor

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.EmImageScans

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.EmImaging

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.EmVitrification

This data item is a pointer to _citation.id in the CITATION category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

A link to related reference information in the citation category.

getCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxReRefinement

A pointer to _citation.id in category CITATION describing the the citation of the entry from from which the experimental data was obtained.

getCitationId() - Method in class org.rcsb.cif.schema.mm.Software

This data item is a pointer to _citation.id in the CITATION category.

getCity() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, city.

getClass1() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Internal classification type 1.

getClass2() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Internal classification type 2.

getClassCode() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code for reflection class, if assigned.

getClassCode() - Method in class org.rcsb.cif.schema.core.Refln

Code identifying the class to which this reflection has been assigned.

getClassCode() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying the class to which this reflection has been assigned.

getClassCode() - Method in class org.rcsb.cif.schema.mm.Refln

The code identifying the class to which this reflection has been assigned.

getClassEvidenceCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Evidence for the assignment of _pdbx_reference_molecule.class

getClassId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClassLink

An identifier for the structural assembly class.

getClassification() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

The purpose of the software.

getClassification() - Method in class org.rcsb.cif.schema.mm.Software

The classification of the program according to its major function.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

Defines the predominant linking type of the entity.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

The primary function of the construct.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyProteinClass

This data item provides a top-level classification of the polymer protein entity.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

Broadly defines the function of this molecule.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

Broadly defines the function of the molecule.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

Broadly defines the function of the molecule.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

Broadly classifies of this linked entity example.

getClazz() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Broadly defines the function of the entity.

getClazz() - Method in class org.rcsb.cif.schema.mm.RefineBIso

A class of atoms treated similarly for isotropic B-factor (displacement-parameter) refinement.

getClazz() - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

The class of atoms treated similarly for occupancy refinement.

getCleavageBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getCleavageEnzymes() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

The names of the enzymes used to cleave the vector.

getCleavageTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The temperature in degrees celsius at which the cleavage was performed.

getCleavageTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The time in minutes for the cleavage reaction

getClosest() - Method in class org.rcsb.cif.schema.core.Function

The function d = Closest( v, w ) returns the cell translation vector required to obtain the closest cell-translated occurence of the vector V to the vector W.

getClustId() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.

getClustId() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.

getCOD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by Crystallography Open Database (COD).

getCOD() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by Crystallography Open Database (COD).

getCode() - Method in class org.rcsb.cif.schema.core.DiffrnAttenuator

Code identifying a particular attenuator setting; referenced by the _diffrn_refln.attenuator_code which is stored with the intensities.

getCode() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Code identifying a reflection class.

getCode() - Method in class org.rcsb.cif.schema.core.DiffrnScaleGroup

Code identifying a specific scale group of reflections (e.g.

getCode() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

Code identifying a standard reflection used to monitor source intensity variations or crystal degradation or movement during data collection.

getCode() - Method in class org.rcsb.cif.schema.core.Journal

The coeditor identifier.

getCode() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The coeditor identifier.

getCode() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Code of the technical editor for this publication.

getCode() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Code identifying a certain reflection class.

getCode() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Code identifying a reflection class.

getCode() - Method in class org.rcsb.cif.schema.mm.DiffrnAttenuator

A code associated with a particular attenuator setting.

getCode() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

The code identifying a certain reflection class.

getCode() - Method in class org.rcsb.cif.schema.mm.DiffrnScaleGroup

The value of _diffrn_scale_group.code must uniquely identify a record in the DIFFRN_SCALE_GROUP list.

getCode() - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

The code identifying a reflection measured as a standard reflection with the indices _diffrn_standard_refln.index_h, _diffrn_standard_refln.index_k and _diffrn_standard_refln.index_l.

getCode() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

The code identifying a certain reflection class.

getCode() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

The code identifying a certain reflection class.

getCode() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

A code to indicate whether this operator describes a relationship between coordinates all of which are given in the data block (in which case the value of code is 'given'), or whether the operator is used to generate new coordinates from those that are given in the data block (in which case the value of code is 'generate').

getCodeCAS() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Chemical Abstracts Service.

getCodeCAS() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by Chemical Abstracts.

getCodeCOD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by Crystallography Open Database (COD).

getCodeCSD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Cambridge Structural Database.

getCodeCSD() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the Cambridge Structural Database.

getCodeDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by the Cambridge Crystallographic Data Centre (CCDC) to files containing structural information archived by the CCDC.

getCodeDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.mm.Database

Deposition numbers assigned by the Cambridge Crystallographic Data Centre (CCDC) to files containing structural information archived by the CCDC.

getCodeDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by the Fachinformationszentrum Karlsruhe (FIZ) to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getCodeDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.mm.Database

Deposition numbers assigned by the Fachinformationszentrum Karlsruhe (FIZ) to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getCodeDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by various journals to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getCodeDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.mm.Database

Deposition numbers assigned by various journals to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getCodeICSD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Inorganic Crystal Structure Database.

getCodeICSD() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the Inorganic Crystal Structure Database.

getCodeMDF() - Method in class org.rcsb.cif.schema.core.Database

Code assigned in the Metals Data File.

getCodeMDF() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the Metals Data File.

getCodenASTM() - Method in class org.rcsb.cif.schema.core.Journal

ASTM code assigned to journal.

getCodenASTM() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCodeNBS() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the NBS (NIST) Crystal Data Database.

getCodeNBS() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the NBS (NIST) Crystal Data Database.

getCodenCambridge() - Method in class org.rcsb.cif.schema.core.Journal

Cambridge Cryst.

getCodenCambridge() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCodePDB() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Protein Data Base.

getCodePDB() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the Protein Data Bank.

getCodePDF() - Method in class org.rcsb.cif.schema.core.Database

Code assigned in the Powder Diffraction File.

getCodePDF() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the Powder Diffraction File (JCPDS/ICDD).

getCoeditorAddress() - Method in class org.rcsb.cif.schema.core.Journal

The postal address of the coeditor.

getCoeditorAddress() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorCode() - Method in class org.rcsb.cif.schema.core.Journal

The coeditor identifier.

getCoeditorCode() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorEmail() - Method in class org.rcsb.cif.schema.core.Journal

The email address of the coeditor.

getCoeditorEmail() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorFax() - Method in class org.rcsb.cif.schema.core.Journal

The fax number of the coeditor.

getCoeditorFax() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorName() - Method in class org.rcsb.cif.schema.core.Journal

The name of the coeditor.

getCoeditorName() - Method in class org.rcsb.cif.schema.core.Publ

The name of the Co-editor whom the authors would like to process the submitted manuscript.

getCoeditorName() - Method in class org.rcsb.cif.schema.core.PublRequested

The name of the Co-editor whom the authors would like to process the submitted manuscript.

getCoeditorName() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorNotes() - Method in class org.rcsb.cif.schema.core.Journal

Notes on coeditor interaction wrt this publication.

getCoeditorNotes() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoeditorPhone() - Method in class org.rcsb.cif.schema.core.Journal

The phone number of the coeditor.

getCoeditorPhone() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getCoefficientMu() - Method in class org.rcsb.cif.schema.core.Exptl

Absorption coefficient mu calculated from the atomic content of the cell, the density and the radiation wavelength.

getCoefficientMu() - Method in class org.rcsb.cif.schema.core.ExptlAbsorpt

Absorption coefficient mu calculated from the atomic content of the cell, the density and the radiation wavelength.

getCollection() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used for data collection.

getCollectionTimeTotal() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The total number of hours required to measure this data set.

getCollectionVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used for data collection.

getCollimation() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Description of the collimation or focusing applied to the radiation.

getCollimation() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The collimation or focusing applied to the radiation.

getCollimation() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The collimation or type of focusing optics applied to the radiation.

getColorBlue() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Gives rgb color code in order to produce atlas entry packing picture.

getColorGreen() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Gives rgb color code in order to produce atlas entry packing picture.

getColorRed() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Gives rgb color code in order to produce atlas entry packing picture.

getColour() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Colour description of a crystal as a list of the allowed exptl_crystal_appearance states for general, intensity and hue.

getColour() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The colour of the crystal.

getColourLustre() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Appearance of the crystal as prescribed state codes.

getColourLustre() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The enumeration list of standardized names developed for the International Centre for Diffraction Data.

getColourModifier() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Colour intensity of the crystal as prescribed state codes.

getColourModifier() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The enumeration list of standardized names developed for the International Centre for Diffraction Data.

getColourPrimary() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Colour hue of the crystals as prescribed state codes.

getColourPrimary() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The enumeration list of standardized names developed for the International Centre for Diffraction Data.

getColumn(String) - Method in class org.rcsb.cif.model.binary.BinaryCategory

getColumn(String) - Method in interface org.rcsb.cif.model.Block

Retrieve a Column by name.

getColumn(String) - Method in class org.rcsb.cif.model.Category.EmptyCategory

getColumn(String) - Method in interface org.rcsb.cif.model.Category

Retrieve a specific Column by name.

getColumn(String) - Method in class org.rcsb.cif.model.text.TextCategory

getColumn(String) - Method in class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

getColumn(String) - Method in class org.rcsb.cif.schema.DelegatingCategory

getColumn(String, Function<Column<?>, C>) - Method in interface org.rcsb.cif.model.Category

getColumnname() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column name.

getColumnName() - Method in class org.rcsb.cif.EncodingStrategyHint

The column this hint refers to.

getColumnName() - Method in class org.rcsb.cif.model.binary.BinaryColumn

getColumnName() - Method in class org.rcsb.cif.model.builder.ColumnBuilderImpl

getColumnName() - Method in class org.rcsb.cif.model.Column.EmptyColumn

getColumnName() - Method in interface org.rcsb.cif.model.Column

The name of this Column.

getColumnName() - Method in interface org.rcsb.cif.model.ColumnBuilder

The name of this column

getColumnName() - Method in class org.rcsb.cif.model.text.TextColumn

getColumnName() - Method in class org.rcsb.cif.schema.DelegatingColumn

getColumns() - Method in class org.rcsb.cif.model.binary.BinaryCategory

getColumns() - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

getColumns() - Method in class org.rcsb.cif.model.Category.EmptyCategory

getColumns() - Method in interface org.rcsb.cif.model.Category

getColumns() - Method in interface org.rcsb.cif.model.CategoryBuilder

The column map of this builder (and Category about to be created).

getColumns() - Method in class org.rcsb.cif.model.text.TextCategory

getColumns() - Method in class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

getColumns() - Method in class org.rcsb.cif.schema.DelegatingCategory

getColumnSerialNo() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column serial number.

getColumnTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The temperature in degrees celsius at which this column was run.

getColumnType() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The type of column used in this step.

getColumnVolume() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The volume of the column used in this step.

getComment() - Method in class org.rcsb.cif.schema.core.Publ

The comment section of the submitted paper.

getComment() - Method in class org.rcsb.cif.schema.core.PublSection

The comment section of the submitted paper.

getCommonName() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The common name of the organism from which the entity was isolated.

getCommonName() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The common name of the component.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompChirAtom

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompPlane

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

This data item is a pointer to _chem_comp_atom.comp_id in the CHEM_COMP_ATOM category.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The component identifier for the residue.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

The component identifier of the non-polymer feature.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

The component identifier of the atom.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

The component identifier of the residue in the entity where the probe is attached.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The component identifier corresponding to this coordinate position.

getCompId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The component identifier for the residue.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomFeature

This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

The chemical component for which this relationship applies.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

The chemical component identifier used by the depositor to represent this component.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

The component identifier for this feature.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompImport

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

An element of the chemical component instance identifier.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModel

An identifier for chemical component definition.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompNonstandard

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompRelated

The chemical component for which this relationship applies.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

The chemical component for which this synonym applies.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

The chemical component identifier used by the depositor to represent this component.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchList

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Chemical component identifier

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNonpoly

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

The value of _exptl_crystal_grow_comp.comp_id must uniquely identify each item in the PDBX_EXPTL_CRYSTAL_GROW_COMP list.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

The component identifer for the constituent within the linked entity..

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

The monomer name found at this position in the referenced database entry.

getCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the identifier of the inserted residue.

getCompId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The component identifier for the first monomer partner in the cross link.

getCompId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The component identifier for the first monomer partner in the cross link.

getCompId1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The component identifier for the first monomer partner in the predicted contact.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The component identifier for the first atom in the interaction.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The component identifier for the first component making the linkage.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The component identifier for the first component making the linkage.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The component identifier in the first of the two entities containing the linkage.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The component identifier in the first of the two entities containing the linkage.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The component identifier in the first of the two components making the linkage.

getCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The component identifier in the first of the two constituents containing the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The component identifier for the second monomer partner in the cross link.

getCompId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The component identifier for the second monomer partner in the cross link.

getCompId2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The component identifier for the second monomer partner in the predicted contact.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The component identifier for the second atom in the interaction.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The component identifier for the second component making the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The component identifier for the second component making the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The component identifier in the second of the two entities containing the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The component identifier in the second of the two entities containing the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The component identifier in the second of the two components making the linkage.

getCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The component identifier in the second of the two constituents containing the linkage.

getCompIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

The leading monomer component of the polymeric segment.

getCompIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The component identifier of the beginning residue / residue range.

getCompIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

The starting residue for the sequence segment of missing residues.

getCompIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

The trailing monomer component of the polymeric segment.

getCompIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The component identifier of the ending residue / residue range.

getCompIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

The ending residue for the sequence segment of missing residues.

getCompilerName() - Method in class org.rcsb.cif.schema.mm.Software

The compiler used to compile the software.

getCompilerVersion() - Method in class org.rcsb.cif.schema.mm.Software

The version of the compiler used to compile the software.

getCompName() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

A common name for the component of the solution.

getComponent() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The name of each component in the sample

getComponent1() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The entity component identifier for the first of two entities containing the linkage.

getComponent1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The entity component identifier for the first of two entities containing the linkage.

getComponent2() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The entity component identifier for the second of two entities containing the linkage.

getComponent2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The entity component identifier for the second of two entities containing the linkage.

getComponentId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

The component number of this entity within the molecule.

getComponentId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

The component number of this entity within the molecule.

getComponentId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The entity component identifier entity containing the linkage.

getComposition() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The composition of the assembly.

getCompoundDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

Additional details about the macromolecular compounds in this entry.

getCompoundDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Special details about this molecule.

getCompoundSource() - Method in class org.rcsb.cif.schema.core.Chemical

Description of the source of the compound under study, or of the parent molecule if a simple derivative is studied.

getCompoundSource() - Method in class org.rcsb.cif.schema.mm.Chemical

Description of the source of the compound under study, or of the parent molecule if a simple derivative is studied.

getComputing() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to record details of the computer programs used in the crystal structure analysis.

getComputing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the COMPUTING category record details about the computer programs used in the crystal structure analysis.

getConc() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The concentration of the solution component.

getConc() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The millimolar concentration of buffer component.

getConc() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

The concentration value of the solution component.

getConcAssayMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The method used to measure the protein concentration

getConcDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

Details of the protein concentration procedure

getConcDeviceId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getConcentration() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

The concentration of the sample (arbitrary units).

getConcentration() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

The concentration (in milligrams per milliliter, mg/ml) of the complex in the sample.

getConcentration() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The concentration value of the component.

getConcentrationErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

Estimate for the standard error associated with the concentration value of the sample component.

getConcentrationRange() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The concentration range for the component.

getConcentrationRange() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The concentration range (mg/mL) of the complex in the sample used in the solution scattering experiment to determine the mean radius of structural elongation.

getConcentrationUnits() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

Units for the sample concentration value.

getConcentrationUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The concentration units of the component.

getConcRange() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

The concentration range of the solution component.

getConcUnits() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The concentration units of the component.

getConcUnits() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

The concentration units for the solution component.

getConditionalCrosslinkFlag() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The cross link conditionality.

getConditionsId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Pointer to '_pdbx_nmr_exptl_sample_conditions.conditions_id'

getConditionsId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

The number to identify the set of sample conditions.

getConditionsId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The condition number as defined above.

getConditionsId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Pointer to '_pdbx_nmr_exptl_sample_conditions.conditions_id'

getConditionsLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Pointer to 'pdbx_nmr_exptl_sample_conditions.label'.

getConditionsLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Pointer to 'pdbx_nmr_exptl_sample_conditions.label'.

getConformationType() - Method in class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

Provides overall idea about conformation type of NA.

getConformerId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRepresentative

If a member of the ensemble has been selected as a representative structure, identify it by its model number.

getConformersCalculatedTotalNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The total number of conformer (models) that were calculated in the final round.

getConformerSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

By highlighting the appropriate choice(s), describe how the submitted conformer (models) were selected.

getConformerSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A description of the conformer selection criteria used.

getConformersSubmittedTotalNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The number of conformer (models) that are submitted for the ensemble.

getConfTypeId() - Method in class org.rcsb.cif.schema.mm.StructConf

This data item is a pointer to _struct_conf_type.id in the STRUCT_CONF_TYPE category.

getConnect() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The index of connectivity is the product of the (2Fobs-Fcal) electron density values for the backbone atoms (N, CA and C) divided by the average value for the structure.

getConnectTo() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Identifies a connected atom within the component.

getConnTypeId() - Method in class org.rcsb.cif.schema.mm.StructConn

This data item is a pointer to _struct_conn_type.id in the STRUCT_CONN_TYPE category.

getConstraintFilename() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Name of the uploaded file that contains the constraint data.

getConstraintNumber() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Number of constraints of this type and subtype in the file.

getConstraints() - Method in class org.rcsb.cif.schema.core.AtomSite

A description of the constraints applied to parameters at this site during refinement.

getConstraints() - Method in class org.rcsb.cif.schema.mm.AtomSite

A description of the constraints applied to parameters at this site during refinement.

getConstraintSubtype() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Specific type of constraint.

getConstraintType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

The general type of constraint (distance, torsion angle, RDC, etc.)

getConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The value of _pdbx_construct_feature.construct_id uniquely identifies the construct with which the feature is associated.

getContactAuthor() - Method in class org.rcsb.cif.schema.core.Publ

The name of the author(s) submitting the manuscript and data block.

getContactAuthor() - Method in class org.rcsb.cif.schema.mm.Publ

The name and address of the author submitting the manuscript and data block.

getContactAuthor() - Method in class org.rcsb.cif.schema.mm.Software

The recognized contact author of the software.

getContactAuthorAddress() - Method in class org.rcsb.cif.schema.core.Publ

The address of the author submitting the manuscript and data block.

getContactAuthorAddress() - Method in class org.rcsb.cif.schema.mm.Publ

The address of the author submitting the manuscript and data block.

getContactAuthorEmail() - Method in class org.rcsb.cif.schema.core.Publ

E-mail address in a form recognizable to international networks.

getContactAuthorEmail() - Method in class org.rcsb.cif.schema.mm.Publ

E-mail address in a form recognizable to international networks.

getContactAuthorEmail() - Method in class org.rcsb.cif.schema.mm.Software

The e-mail address of the person specified in _software.contact_author.

getContactAuthorFax() - Method in class org.rcsb.cif.schema.core.Publ

Facsimile telephone number of the author submitting the manuscript and data block.

getContactAuthorFax() - Method in class org.rcsb.cif.schema.mm.Publ

Facsimile telephone number of the author submitting the manuscript and data block.

getContactAuthorName() - Method in class org.rcsb.cif.schema.core.Publ

The name of the author(s) submitting the manuscript and data block.

getContactAuthorName() - Method in class org.rcsb.cif.schema.mm.Publ

The name of the author submitting the manuscript and data block.

getContactAuthorPhone() - Method in class org.rcsb.cif.schema.core.Publ

Telephone number of author submitting the manuscript and data block.

getContactAuthorPhone() - Method in class org.rcsb.cif.schema.mm.Publ

Telephone number of the author submitting the manuscript and data block.

getContactDistanceIncr() - Method in class org.rcsb.cif.schema.core.Geom

Increment added to the bond radii for the atomic species to specify the maximum permitted "contact" distance between two "non-bonded" atom sites.

getContactDistanceMin() - Method in class org.rcsb.cif.schema.core.Geom

Minimum permitted "contact" distance between two "non-bonded" atom sites.

getContactLetter() - Method in class org.rcsb.cif.schema.core.Publ

A letter submitted to the journal editor by the contact author.

getContactLetter() - Method in class org.rcsb.cif.schema.mm.Publ

A letter submitted to the journal editor by the contact author.

getContentFormat() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The content format of the referenced data file.

getContents() - Method in class org.rcsb.cif.schema.core.PublBody

A text section of a submitted paper.

getContents() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

A complete description of each NMR sample.

getContents() - Method in class org.rcsb.cif.schema.mm.PublBody

A text section of a paper.

getContentType() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

The type of content in the file.

getContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

This code defines the content of the message.

getContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

The identifying content type of the related entry.

getContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The content type of the referenced data file.

getContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

A the message content type or class.

getContentValue() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

A the specific value of the content type or class

getContinent() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The continent of the author of the data block to whom correspondence should be addressed.

getContourLevel() - Method in class org.rcsb.cif.schema.mm.EmMap

recommended contour level for viewing the map

getContourLevel() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

recommended contour level for viewing the map

getContourLevel() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

recommended contour level for viewing the map

getContourLevelSource() - Method in class org.rcsb.cif.schema.mm.EmMap

source of the recommended contour level

getConvertUijToBetaij() - Method in class org.rcsb.cif.schema.core.Cell

The reciprocal space matrix for converting the U(ij) matrix of atomic displacement parameters to a dimensionless beta(IJ) matrix.

getConvertUisoToUij() - Method in class org.rcsb.cif.schema.core.Cell

The reciprocal space matrix for converting the isotropic Uiso atomic displacement parameter to the anisotropic matrix Uij.

getCoolingDetails() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

Details of the cooling treatment applied to this crystal.

getCoordAverageRmsdMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

Describe the method for calculating the coordinate average rmsd.

getCoordinateLinkage() - Method in class org.rcsb.cif.schema.core.Citation

Code specifies whether this citation is concerned with precisely the set of coordinates given in the data block.

getCoordinateLinkage() - Method in class org.rcsb.cif.schema.mm.Citation

_citation.coordinate_linkage states whether this citation is concerned with precisely the set of coordinates given in the data block.

getCoordSection() - Method in class org.rcsb.cif.schema.mm.NdbOriginalNdbCoordinates

Placeholder item to hold unparsed coordinate data.

getCoordsXyz() - Method in class org.rcsb.cif.schema.core.SpaceGroupWyckoff

Coordinates of one site of a Wyckoff position expressed in terms of its fractional coordinates (x,y,z) in the unit cell.

getCorrectionOperation() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

CTF correction operation

getCorrectionTMax() - Method in class org.rcsb.cif.schema.core.Exptl

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getCorrectionTMax() - Method in class org.rcsb.cif.schema.core.ExptlAbsorpt

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getCorrectionTMin() - Method in class org.rcsb.cif.schema.core.Exptl

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getCorrectionTMin() - Method in class org.rcsb.cif.schema.core.ExptlAbsorpt

Maximum transmission factor for the crystal and radiation applied to the measured intensities, it includes the correction for absorption by the specimen mount and diffractometer as well as by the specimen itself.

getCorrectionType() - Method in class org.rcsb.cif.schema.core.Exptl

Code identifying the absorption correction type and method.

getCorrectionType() - Method in class org.rcsb.cif.schema.core.ExptlAbsorpt

Code identifying the absorption correction type and method.

getCorrectionVal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

An uniform correction value that was applied because of an extenuating circumstance such as data collection at an unusual temperature.

getCorrelation() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The overall real space density correlation coefficient.

getCorrelation() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The real space electron density correlation coefficient (RSCC) for the residue.

getCorrelation() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

The overall real space electron density correlation coefficient (RSCC) for the structure.

getCorrelation() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Correlation coefficient of electron density for each residue or ligand, side chain, main chain The density correlation coefficient is calculated for each component from atomic densities of (2Fobs-Fcalc) map - "Robs" and the model map (Fcalc) - "Rcalc" : D_corr = <Robs><Rcalc>/sqrt(<Robs**2><Rcalc**2>) where <Robs> is the mean of "observed" densities of atoms of the component (backbone or side chain).

getCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The correlations between the observed and calculated structure factors.

getCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc identifies the correlation between the observed and the calculated structure factor after rotation and translation.

getCorrelationCoeffFoToFc() - Method in class org.rcsb.cif.schema.mm.Refine

The correlation coefficient between the observed and calculated structure factors for reflections included in the refinement.

getCorrelationCoeffFoToFcFree() - Method in class org.rcsb.cif.schema.mm.Refine

The correlation coefficient between the observed and calculated structure factors for reflections not included in the refinement (free reflections).

getCorrelationCoeffIoToIc() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.correlation_coeff_Io_to_Ic identifies the correlation between the observed and the calculated intensity (~|F|^2) after rotation and translation.

getCorrelationMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Correlation coefficient of electron density for each residue or ligand, side chain, main chain The density correlation coefficient is calculated for each component from atomic densities of (2Fobs-Fcalc) map - "Robs" and the model map (Fcalc) - "Rcalc" : D_corr = <Robs><Rcalc>/sqrt(<Robs**2><Rcalc**2>) where <Robs> is the mean of "observed" densities of atoms of the component (backbone or side chain).

getCorrelationOverall() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The overall electron density correlation coefficient.

getCorrelationSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Correlation coefficient of electron density for each residue or ligand, side chain, main chain The density correlation coefficient is calculated for each component from atomic densities of (2Fobs-Fcalc) map - "Robs" and the model map (Fcalc) - "Rcalc" : D_corr = <Robs><Rcalc>/sqrt(<Robs**2><Rcalc**2>) where <Robs> is the mean of "observed" densities of atoms of the component (backbone or side chain).

getCorrelationSigma() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

The overall standard deviation of the real space electron density correlation coefficient (RSCC) for the structure.

getCorrespondingAuthorStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate status about corresponding author data.

getCountry() - Method in class org.rcsb.cif.schema.core.Citation

Country of publication; for journal articles and book chapters.

getCountry() - Method in class org.rcsb.cif.schema.mm.Citation

The country/region of publication; relevant for books and book chapters.

getCountry() - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

The country/region providing the funding support for the entry.

getCountry() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The country/region of the author of the data block to whom correspondence should be addressed.

getCountry() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The country/region location of the institution submitting the deposition.

getCountry() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

The country/region of publication.

getCountsBg1() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The set of data items which specify the diffractometer counts.

getCountsBg1() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer counts for the measurement of the background before the peak.

getCountsBg2() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The set of data items which specify the diffractometer counts.

getCountsBg2() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer counts for the measurement of the background after the peak.

getCountsNet() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The set of data items which specify the diffractometer counts.

getCountsNet() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer counts for the measurement of net counts after background removal.

getCountsPeak() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The set of data items which specify the diffractometer counts.

getCountsPeak() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer counts for the measurement of counts for the peak scan or position.

getCountsTotal() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The set of data items which specify the diffractometer counts.

getCountsTotal() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The diffractometer counts for the measurement of total counts (background plus peak).

getCovalentBondRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The covalent bond rmsd to the target value for the ensemble.

getCovalentBondRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error in the covalent bond rmsd.

getCovalentGeomAnglesTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for covalent geometry angle constraints term employed in the target function used for simulated annealing.

getCovalentGeomAnglesTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the covalent geometry angle constraints term.

getCovalentGeomBondTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for the covalent geometry bond length constraints term employed in the target function used for simulated annealing.

getCovalentGeomBondTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the covalent geometry bond length constraints term.

getCovalentGeomImpropersTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for covalent geometry impropers contstraints term employed in the target function used for simulated annealing.

getCovalentGeomImpropersTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the covalent geometry impropers constraints term.

getCovarianceMatrix11() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix11() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix12() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix12() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix13() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix13() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix21() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix21() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix22() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix22() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix23() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix23() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix31() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix31() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix32() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix32() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix33() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

Data item of the covariance matrix representing the Gaussian object.

getCovarianceMatrix33() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

Data item of the covariance matrix representing the Gaussian object.

getCreation() - Method in class org.rcsb.cif.schema.core.Publ

A description of the wordprocessor package and computer used to create the manuscript stored as _publ_manuscript.processed.

getCreation() - Method in class org.rcsb.cif.schema.core.PublManuscript

A description of the wordprocessor package and computer used to create the manuscript stored as _publ_manuscript.processed.

getCreationDate() - Method in class org.rcsb.cif.schema.core.Audit

The timestamp of the data revision.

getCreationDate() - Method in class org.rcsb.cif.schema.mm.Audit

A date that the data block was created.

getCreationMethod() - Method in class org.rcsb.cif.schema.core.Audit

A description of how the revision was applied to the data.

getCreationMethod() - Method in class org.rcsb.cif.schema.mm.Audit

A description of how data were entered into the data block.

getCriteria() - Method in class org.rcsb.cif.schema.mm.StructConfType

The criteria used to assign this conformation type.

getCriteria() - Method in class org.rcsb.cif.schema.mm.StructConnType

The criteria used to define the interaction.

getCriterion() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

A criterion used to define a parameter value that deviates significantly from its ideal value in the model obtained by restrained least-squares refinement.

getCromerMannA1() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA1() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA2() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA2() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA3() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA3() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA4() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannA4() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB1() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB1() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB2() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB2() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB3() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB3() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB4() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannB4() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannC() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannC() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getCromerMannCoeffs() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of Cromer-Mann coefficients for generating X-ray scattering factors.

getCrossCorrelationCoefficient() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

The cross correlation coefficient corresponding to the model to image fitting.

getCrossCorrelationCoefficient() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

The cross correlation coefficient corresponding to the model to map fitting.

getCrossfireX() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Angular spread (in degrees) of incident X-ray along the horizontal (x) direction.

getCrossfireX() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The detector crossfire value in the X direction.

getCrossfireXEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of angular spread (in degrees) of incident X-ray along the horizontal (x) direction.

getCrossfireXy() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Correlated xy component of the beam spread.

getCrossfireXy() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The detector coupled crossfire value for XY.

getCrossfireXyEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of correlated xy component of the beam spread (in degrees^2).

getCrossfireY() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Angular spread (in degrees) of incident X-ray along the vertical (y) direction.

getCrossfireY() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The detector crossfire value in the Y direction.

getCrossfireYEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of angular spread (in degrees) of incident X-ray along the vertical (y) direction.

getCrossLinkPartner() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

The identity of the cross link partner corresponding to the pseudo site.

getCruickshankDpiXyz() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The DPI on the model determined by REFMAC.

getCryogen() - Method in class org.rcsb.cif.schema.mm.EmImaging

Cryogen type used to maintain the specimen stage temperature during imaging in the microscope.

getCryogenName() - Method in class org.rcsb.cif.schema.mm.EmVitrification

This is the name of the cryogen.

getCryoProtectant() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

The type of cryo-protectant used during specimen preparation.

getCrystalConcentration() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the concentration of crystals in the solution being injected.

getCrystalDataId() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

Identifier for crystal on which data was collected.

getCrystalHits() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of frames collected in which the crystal was hit.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.Diffrn

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The identifer of the crystal.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The crystal identifier.

getCrystalId() - Method in class org.rcsb.cif.schema.mm.Refln

This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.

getCrystalsNumber() - Method in class org.rcsb.cif.schema.core.Exptl

Total number of crystals used in the measurement of intensities.

getCrystalsNumber() - Method in class org.rcsb.cif.schema.mm.Exptl

The total number of crystals used in the measurement of intensities.

getCrystalsPerUnit() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

The number of crystals per dropplet or pore in fixed target

getCrystalSupport() - Method in class org.rcsb.cif.schema.core.Diffrn

The physical device used to support the crystal during data collection.

getCrystalSupport() - Method in class org.rcsb.cif.schema.mm.Diffrn

The physical device used to support the crystal during data collection.

getCrystalSystem() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The name of the system of geometric crystal classes of space groups (crystal system) to which the space group belongs.

getCrystalSystem() - Method in class org.rcsb.cif.schema.mm.SpaceGroup

The name of the system of geometric crystal classes of space groups (crystal system) to which the space group belongs.

getCrystalToDetectorDistance() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Distance (mm) from crystal to detector.

getCrystalToDetectorDistanceEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of distance (mm) from crystal to detector.

getCrystalTreatment() - Method in class org.rcsb.cif.schema.core.Diffrn

Remarks about how the crystal was treated prior to intensity measurement.

getCrystalTreatment() - Method in class org.rcsb.cif.schema.mm.Diffrn

Remarks about how the crystal was treated prior to intensity measurement.

getCrystalType() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Crystal type

getCrysxSpindle() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Crystal mis-orientation angle (in degree) on x axis (spindle).

getCrysxSpindleEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of orientation angle (in degree) on x axis.

getCrysyVertical() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Crystal mis-orientation angle (in degree) on y axis (vertical).

getCrysyVerticalEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of orientation angle (in degree) on y axis.

getCryszBeam() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Crystal mis-orientation angle (in degree) on z axis (in beam).

getCryszBeamEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of orientation angle (in degree) on yzaxis.

getCSamplingLength() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Length used to sample the reciprocal lattice lines in the c-direction.

getCSD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Cambridge Structural Database.

getCSD() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by the Cambridge Structural Database.

getCSDHistory() - Method in class org.rcsb.cif.schema.core.Database

The history of changes made by the Cambridge Crystallographic Data Centre and incorporated into the Cambridge Structural Database (CSD).

getCSDHistory() - Method in class org.rcsb.cif.schema.mm.Database

A history of changes made by the Cambridge Crystallographic Data Centre and incorporated into the Cambridge Structural Database (CSD).

getCTerminalSeqTag() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Any C-terminal sequence tag as a string of one letter amino acid codes

getCtfCorrectionMethod() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The CTF-correction method.

getCTolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell length C

getCultureAdditives() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Any additives to the base media in which the expression host was grown.

getCultureBaseMedia() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The name of the base media in which the expression host was grown.

getCultureTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The temperature in degrees celsius at which the expression host was allowed to grow prior to induction/transformation/transfection.

getCultureTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The time in hours for which the expression host was allowed to grow prior to induction/transformation/transfection.

getCultureVolume() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The volume of media in milliliters in which the expression host was grown.

getCurrent() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Generator current at which the radiation source device was operated.

getCurrent() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The current in milliamperes at which the radiation source was operated.

getCurrent() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Current of the ion beam, in nanoamperes (nA)

getCurrentStatus() - Method in class org.rcsb.cif.schema.mm.EmAdmin

This data item indicates the current status of the EMDB entry.

getCurrentVersion() - Method in class org.rcsb.cif.schema.mm.PdbxAudit

The value of _pdbx_audit.entry_id identifies the data block.

getCycleId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

This is a number of the processing cycle.

getCycleId() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

Identifier for the current cycle of post-processing.

getCycleId() - Method in class org.rcsb.cif.schema.mm.RefineHist

The value of _refine_hist.cycle_id must uniquely identify a record in the REFINE_HIST list.

getData() - Method in class org.rcsb.cif.binary.data.ByteArray

getData() - Method in interface org.rcsb.cif.binary.data.EncodedData

Access to the underlying array of information.

getData() - Method in class org.rcsb.cif.binary.data.Float32Array

getData() - Method in class org.rcsb.cif.binary.data.Float64Array

getData() - Method in interface org.rcsb.cif.binary.data.FloatArray

getData() - Method in class org.rcsb.cif.binary.data.Int16Array

getData() - Method in class org.rcsb.cif.binary.data.Int32Array

getData() - Method in class org.rcsb.cif.binary.data.Int8Array

getData() - Method in interface org.rcsb.cif.binary.data.IntArray

getData() - Method in class org.rcsb.cif.binary.data.StringArray

getData() - Method in class org.rcsb.cif.binary.data.Uint16Array

getData() - Method in class org.rcsb.cif.binary.data.Uint32Array

getData() - Method in class org.rcsb.cif.binary.data.Uint8Array

getDataAnalysis() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used for data analysis.

getDataAnalysisSoftwareList() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

A list of the software used in the data analysis

getDataAnalysisVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used for data analysis.

getDatabase() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items recording database deposition.

getDatabase() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE category have been superseded by data items in the DATABASE_2 category.

getDatabase2() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE_2 category record details about the database identifiers of the data block.

getDatabaseAccession() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Database accession.

getDatabaseBeginInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Insertion code.

getDatabaseBeginResNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

First residue number.

getDatabaseCode() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items recording database deposition.

getDatabaseCode() - Method in class org.rcsb.cif.schema.mm.Database2

The code assigned by the database identified in _database_2.database_id.

getDatabaseEndInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Insertion code.

getDatabaseEndResNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Last residue number.

getDatabaseHosted() - Method in class org.rcsb.cif.schema.mm.IhmDatasetList

A flag that indicates whether the dataset is archived in an IHM related database or elsewhere.

getDatabaseId() - Method in class org.rcsb.cif.schema.core.DatabaseRelated

An identifier for the database that contains the related dataset.

getDatabaseId() - Method in class org.rcsb.cif.schema.mm.Database2

An abbreviation that identifies the database.

getDatabaseIdCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Database id code.

getDatabaseIdCSD() - Method in class org.rcsb.cif.schema.core.Citation

Identifier ('refcode') of the database record in the Cambridge Structural Database containing details of the cited structure.

getDatabaseIdCSD() - Method in class org.rcsb.cif.schema.mm.Citation

Identifier ('refcode') of the database record in the Cambridge Structural Database that contains details of the cited structure.

getDatabaseIdMedline() - Method in class org.rcsb.cif.schema.core.Citation

i Medline accession number categorizing a bibliographic entry.

getDatabaseIdMedline() - Method in class org.rcsb.cif.schema.mm.Citation

Accession number used by Medline to categorize a specific bibliographic entry.

getDatabaseName() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Database name.

getDatabasePDBCaveat() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE_PDB_CAVEAT category record details about features of the data block flagged as 'caveats' by the Protein Data Bank (PDB).

getDatabasePDBMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The DATABASE_PDB_MATRIX category provides placeholders for transformation matrices and vectors used by the Protein Data Bank (PDB).

getDatabasePDBRemark() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE_PDB_REMARK category record details about the data block as archived by the Protein Data Bank (PDB).

getDatabasePDBRev() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE_PDB_REV category record details about the history of the data block as archived by the Protein Data Bank (PDB).

getDatabasePDBRevRecord() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DATABASE_PDB_REV_RECORD category record details about specific record types that were changed in a given revision of a PDB entry.

getDatabasePDBTvect() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The DATABASE_PDB_TVECT category provides placeholders for the TVECT matrices and vectors used by the Protein Data Bank (PDB).

getDatabaseRelated() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

A category of items recording entries in databases that describe the same or related data.

getDataCollection() - Method in class org.rcsb.cif.schema.core.Computing

Description of software used to measure diffraction data.

getDataCollection() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for data collection.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

The type of file that the pdbx_audit_revision_history record refers to.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

The type of file that the pdbx_audit_revision_history record refers to.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

The type of file that the pdbx_audit_revision_history record refers to.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

The type of file that the pdbx_audit_revision_history record refers to.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

The type of file that the pdbx_audit_revision_history record refers to.

getDataContentType() - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

The type of the experimenatal data set.

getDataFileCategory() - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

This item defines the kind of data in the file uploaded for deposition.

getDataFileId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

Unique code assigned to the file being uploaded by the depositor and that contains data that will be incorporated into this entry.

getDataFileName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

The name of the file submitted with a deposition that contains the quantitative chemical shift data.

getDataFileName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

The name of the file submitted with a deposition that contains the quantitative data for a spectral peak list.

getDataFileName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

The directory path and file name for the data file that is to be uploaded.

getDataFileSyntax() - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

The syntax or format of the file that is uploaded.

getDataReduction() - Method in class org.rcsb.cif.schema.core.Computing

Description of software used to convert diffraction data to measured structure factors.

getDataReduction() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for data reduction.

getDataReductionDetails() - Method in class org.rcsb.cif.schema.mm.Reflns

A description of special aspects of the data-reduction procedures.

getDataReductionMethod() - Method in class org.rcsb.cif.schema.mm.Reflns

The method used for data reduction.

getDataReductionSoftwareList() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

A list of the software used in the data reduction

getDataReference() - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

A DOI reference to the related data set.

getDatasetDoi() - Method in class org.rcsb.cif.schema.core.Database

The digital object identifier (DOI) registered to identify a data set publication associated with the structure described in the current datablock.

getDatasetGroupId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

An index for the dataset group being used in the post modeling process.

getDatasetGroupId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

An index for the dataset group being used in the modeling protocol.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Identifier to the 2dem class average dataset.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

Identifier to the 3DEM map used.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

Identifier to the crosslinking dataset.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetExternalReference

Identifier to the dataset list used in the I/H modeling.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroupLink

An identifier for the dataset.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

Identifier to the dataset list used in the IHM modeling.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

Identifier to the input data from which the angle restraint is derived.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

Identifier to the input data from which the dihedral restraint is derived.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

Identifier to the input data from which the distance restraint is derived.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

Identifier to the EPR data used.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

Identifier to the input data from which the restraint is derived.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

Identifier to the HDX input data from which the restraints are derived.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

Identifier to the hydroxyl radical footprinting dataset.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

Identifier to the input data from which the interface residue is determined.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmLigandProbe

An identifier for the experimental dataset corresponding to the ligand probe.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

An identifier for the experimental dataset corresponding to the polymer-probe conjugate.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

Identifier to the predicted contacts dataset.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

Identifier to the SAS data used.

getDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

Identifier to the starting model (comparative, experimental or integrative) used as input in the integrative modeling.

getDatasetListIdDerived() - Method in class org.rcsb.cif.schema.mm.IhmRelatedDatasets

The dataset list id corresponding to the derived dataset.

getDatasetListIdPrimary() - Method in class org.rcsb.cif.schema.mm.IhmRelatedDatasets

The primary dataset list id from which the corresponding derived dataset is obtained.

getDataSetType() - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

The type of the experimenatal data set.

getDataType() - Method in class org.rcsb.cif.schema.mm.EmMap

The map data_type describes the data structure of the map voxels.

getDataType() - Method in class org.rcsb.cif.schema.mm.IhmDatasetList

The type of data held in the dataset.

getDataValidationNumber() - Method in class org.rcsb.cif.schema.core.Journal

Journal data items are defined by the journal staff.

getDataValidationNumber() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDataVersionMajor() - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

The major version on data of the experimental data content on which this entry depends.

getDataVersionMinor() - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

The major version on data of the experimental data content on which this entry depends.

getDate() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

Date the PDB revision took place.

getDate() - Method in class org.rcsb.cif.schema.mm.EmImaging

Date (YYYY-MM-DD) of imaging experiment or the date at which a series of experiments began.

getDate() - Method in class org.rcsb.cif.schema.mm.EmObsolete

Dated when the entry made obsolete the other entry

getDate() - Method in class org.rcsb.cif.schema.mm.EmSupersede

Dated when the entry made supersede the other entry

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

The date associated with this audit record.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

The date associated with this audit record.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Date added.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

The date that the sequence was determined.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

This is the date when a message was sent or received.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

The date of replacement.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

Data collection date.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

The date of characterisation step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The date of production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The date of production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

The date of this process step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The date of production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The date of production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

The date of this production step.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

The date associated with this audit record.

getDate() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

The date associated with this audit record.

getDate() - Method in class org.rcsb.cif.schema.mm.Software

The date the software was released.

getDateAccepted() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication was accepted.

getDateAccepted() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateAuthorApproval() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the author's approval is received.

getDateAuthorReleaseRequest() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date on which the author requests entry release.

getDateBegin() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

This is the date of the start of the current processing status state.

getDateBegin() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

The starting date for the current post-processing cycle.

getDateBeginCycle() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

This is the date of the start of the processing cycle.

getDateBeginDeposition() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The starting date for the deposition session.

getDateBeginProcessing() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The starting date for data processing.

getDateBeginReleasePreparation() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date on which release processing began.

getDateChemicalShifts() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the chemical shift data are received.

getDateCoordinates() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the coordinates are received.

getDateDepositionForm() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the deposition form is received.

getDateEnd() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

This is the date of the end of the current processing status state.

getDateEnd() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

The completion date for the current post-processing cycle.

getDateEndCycle() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

This is the date of the end of the processing cycle.

getDateEndProcessing() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The completion date for data processing.

getDateFromCoeditor() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication recieved from coeditor.

getDateFromCoeditor() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateHoldChemicalShifts() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, the chemical shift data may be held after processing for some period of time.

getDateHoldCoordinates() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, a coordinate entry may be held after processing for some period of time.

getDateHoldNmrConstraints() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, the NMR constraint data may be held after processing for some period of time.

getDateHoldNmrData() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, the unified NMR data may be held after processing for some period of time.

getDateHoldStructFact() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, the structure factors may be held after processing for some period of time.

getDateManuscript() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the manuscript is received.

getDateNmrConstraints() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the structure factors are received.

getDateNmrData() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the unified NMR data are received.

getDateOfCsRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of PDB release.

getDateOfMrRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of PDB/RCSB release.

getDateOfNDBRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of NDB/RCSB release.

getDateOfNmrDataRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of PDB release.

getDateOfPDBRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

PDB release date.

getDateOfSfRelease() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of PDB/RCSB release.

getDateOriginal() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

Date the entry first entered the PDB database in the form yyyy-mm-dd.

getDatePrintersFinal() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication last sent to the printers.

getDatePrintersFinal() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDatePrintersFirst() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication first sent to the printers.

getDatePrintersFirst() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateProofsIn() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication proofs recieved.

getDateProofsIn() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateProofsOut() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication proofs sent out.

getDateProofsOut() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateRecdCopyright() - Method in class org.rcsb.cif.schema.core.Journal

Date completed copyright recieved.

getDateRecdCopyright() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateRecdElectronic() - Method in class org.rcsb.cif.schema.core.Journal

Date publication recieved electronically.

getDateRecdElectronic() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateRecdHardCopy() - Method in class org.rcsb.cif.schema.core.Journal

Date publication recieved as hard copy.

getDateRecdHardCopy() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDateReleasedToPDB() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date on which the entry is sent to PDB.

getDateRevised() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of a revision.

getDateStructFact() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date the structure factors are received.

getDateSubmitted() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of complete deposition.

getDateToCoeditor() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication sent to the coeditor.

getDateToCoeditor() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getDbAccession() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The database accession code for the related structure reference.

getDbAccession() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

Accession code of the reference database.

getDbAccession() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

Accession code of the reference database.

getDbAlignBeg() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

The sequence position in the referenced database entry at which the alignment begins.

getDbAlignBeg() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The sequence position in the referenced database entry at which the alignment begins.

getDbAlignEnd() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

The sequence position in the referenced database entry at which the alignment ends.

getDbAlignEnd() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The sequence position in the referenced database entry at which the alignment ends.

getDbAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The asym/strand identifier for the entity molecule of the database starting model.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelReference

The component feature value.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

The database code for this source information

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The database code for this source information

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The database identifier code for the related structure reference.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

The code for this entity or biological unit or for a closely related entity or biological unit in the named database.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

The code for this entity or biological unit or for a closely related entity or biological unit in the named database.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The code for this entity or biological unit or for a closely related entity or biological unit in the named database.

getDbCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

The code for this entity or biological unit or for a closely related entity or biological unit in the named database.

getDbCode() - Method in class org.rcsb.cif.schema.mm.StructRef

The code for this entity or biological unit or for a closely related entity or biological unit in the named database.

getDbCompId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The correspinding component identifier for the residue in the database starting model.

getDbEntityId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The molecular entity of the database starting model.

getDbId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

The identifying code in the related database.

getDbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The monomer type found at this position in the referenced database entry.

getDbMonId() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

The monomer type found at this position in the referenced database entry.

getDbName() - Method in class org.rcsb.cif.schema.mm.EmDbReference

The name of the database containing the related entry.

getDbName() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

The name of the database containing the dataset entry.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelReference

The component model feature type.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

The name of the database containing the related entry.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

The database name for this source information

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The database name for this source information

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The database name for the related structure reference.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

The name of the database containing reference information about this entity or biological unit.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

The name of the database containing reference information about this entity or biological unit.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The name of the database containing reference information about this entity or biological unit.

getDbName() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

The name of the database containing reference information about this entity or biological unit.

getDbName() - Method in class org.rcsb.cif.schema.mm.StructRef

The name of the database containing reference information about this entity or biological unit.

getDbSeqId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The corresponding residue index of the database starting model.

getDbSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

This data item is the database sequence numbering of the deleted residue

getDbSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

The monomer position in the referenced database entry.

getDbSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

Database chemical sequence expressed as string of one-letter residue codes.

getDCCVersion() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The version of the DCC program.

getDecay() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

The percentage decrease in the mean of the intensities for the standard reflections at the start to the finish of the measurement process.

getDecay() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

The percentage decrease in the mean of the intensities for the standard reflections at the start to the finish of the measurement process.

getDecay() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The percentage decrease in the mean of the intensities for the set of standard reflections from the start of the measurement process to the end.

getDecayPercent() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

The percentage decrease in the mean of the intensities for the standard reflections at the start to the finish of the measurement process.

getDefn() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

Yes/No flags whether the corresponding data item marked for inclusion in a journal request list is a standard CIF definition or not.

getDefn() - Method in class org.rcsb.cif.schema.core.PublManuscriptInclExtra

Yes/No flags whether the corresponding data item marked for inclusion in a journal request list is a standard CIF definition or not.

getDelta() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle delta (C5'-C4'-C3'-O3').

getDeltaDeltaPhi() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The difference between two independent determinations of _phasing_MAD_expt.delta_phi.

getDeltaPhi() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The phase difference between F~t~(h), the structure factor due to normal scattering from all atoms, and F~a~(h), the structure factor due to normal scattering from only the anomalous scatterers.

getDeltaPhiFinal() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.delta_phi_final identifies phase difference after density modification

getDeltaPhiFinal() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.delta_phi_final identifies phase difference after density modification with resolution shells.

getDeltaPhiInitial() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.delta_phi_initial identifies phase difference before density modification

getDeltaPhiInitial() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.delta_phi_initial identifies phase difference before density modification with resolution shells.

getDeltaPhiSigma() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The standard uncertainty (estimated standard deviation) of _phasing_MAD_expt.delta_phi.

getDenatureBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getDensityConnectivity() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Defined in sfcheck.

getDensityDiffrn() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Crystal density calculated from crystal unit cell and atomic content.

getDensityDiffrn() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Density values calculated from the crystal cell and contents.

getDensityIndex() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The index of density is the product of the (2Fobs-Fcal) electron density values for the group of atoms divided by the average value for the structure.

getDensityIndexMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Defined in sfcheck.

getDensityIndexMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The index of density is the product of the (2Fobs-Fcal) electron density values for the group of atoms divided by the average value for the structure.

getDensityIndexSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Defined in sfcheck.

getDensityIndexSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The index of density is the product of the (2Fobs-Fcal) electron density values for the group of atoms divided by the average value for the structure.

getDensityMatthews() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The density of the crystal, expressed as the ratio of the volume of the asymmetric unit to the molecular mass of a monomer of the structure, in units of angstroms^3^ per dalton.

getDensityMax() - Method in class org.rcsb.cif.schema.core.Refine

Maximum density value in a difference Fourier map.

getDensityMax() - Method in class org.rcsb.cif.schema.core.RefineDiff

Maximum density value in a difference Fourier map.

getDensityMaxSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Maximum density value in a difference Fourier map.

getDensityMaxSu() - Method in class org.rcsb.cif.schema.core.RefineDiff

Standard Uncertainty of the Maximum density value in a difference Fourier map.

getDensityMeas() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Crystal density measured using standard chemical and physical methods.

getDensityMeas() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Density values measured using standard chemical and physical methods.

getDensityMeasEsd() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Standard Uncertainty of the Crystal density measured using standard chemical and physical methods.

getDensityMeasEsd() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The estimated standard deviation of _exptl_crystal.density_meas.

getDensityMeasGt() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The value above which the density measured using standard chemical and physical methods lies.

getDensityMeasGt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The value above which the density measured using standard chemical and physical methods lies.

getDensityMeasLt() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The value below which the density measured using standard chemical and physical methods lies.

getDensityMeasLt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The value below which the density measured using standard chemical and physical methods lies.

getDensityMeasSu() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Standard Uncertainty of the Crystal density measured using standard chemical and physical methods.

getDensityMeasTemp() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Temperature at which _exptl_crystal.density_meas was determined.

getDensityMeasTemp() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Temperature in kelvins at which _exptl_crystal.density_meas was determined.

getDensityMeasTempEsd() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Standard Uncertainty of the Temperature at which _exptl_crystal.density_meas was determined.

getDensityMeasTempEsd() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The estimated standard deviation of _exptl_crystal.density_meas_temp.

getDensityMeasTempGt() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Temperature above which the measured density was determined.

getDensityMeasTempGt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Temperature in kelvins above which _exptl_crystal.density_meas was determined.

getDensityMeasTempLt() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Temperature below which the measured density was determined.

getDensityMeasTempLt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Temperature in kelvins below which _exptl_crystal.density_meas was determined.

getDensityMeasTempSu() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Standard Uncertainty of the Temperature at which _exptl_crystal.density_meas was determined.

getDensityMethod() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Description of method used to measure _exptl_crystal.density_meas.

getDensityMethod() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The method used to measure _exptl_crystal.density_meas.

getDensityMin() - Method in class org.rcsb.cif.schema.core.Refine

Miniumum density value in a difference Fourier map.

getDensityMin() - Method in class org.rcsb.cif.schema.core.RefineDiff

Miniumum density value in a difference Fourier map.

getDensityMinSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Miniumum density value in a difference Fourier map.

getDensityMinSu() - Method in class org.rcsb.cif.schema.core.RefineDiff

Standard Uncertainty of the Miniumum density value in a difference Fourier map.

getDensityPercentSol() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Density value P calculated from the crystal cell and contents, expressed as per cent solvent.

getDensityRatio() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The density ratio is similar to the density index, but summation of the density for the group is used for calculation.

getDensityRatioMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The density ratio is similar to the density index, but summation of the density for the group is used for calculation.

getDensityRatioSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The density ratio is similar to the density index, but summation of the density for the group is used for calculation.

getDensityRms() - Method in class org.rcsb.cif.schema.core.Refine

Root mean square density value in a difference Fourier map.

getDensityRms() - Method in class org.rcsb.cif.schema.core.RefineDiff

Root mean square density value in a difference Fourier map.

getDensityRmsSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Root mean square density value in a difference Fourier map.

getDensityRmsSu() - Method in class org.rcsb.cif.schema.core.RefineDiff

Standard Uncertainty of the Root mean square density value in a difference Fourier map.

getDepDatasetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityFeatures

The internal identifier assigned to each deposition.

getDepDatasetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

The internal identifier assigned to each deposition.

getDepDatasetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The internal identifier assigned to each deposition.

getDepDatasetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

The internal identifier assigned to each deposition.

getDepDatasetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

The internal identifier assigned to each deposition.

getDependencies() - Method in class org.rcsb.cif.schema.mm.Software

Any prerequisite software required to run _software.name.

getDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by the Cambridge Crystallographic Data Centre (CCDC) to files containing structural information archived by the CCDC.

getDepnumCcdcArchive() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Deposition numbers assigned by the Cambridge Crystallographic Data Centre (CCDC) to files containing structural information archived by the CCDC.

getDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by the Fachinformationszentrum Karlsruhe (FIZ) to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getDepnumCcdcFiz() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Deposition numbers assigned by the Fachinformationszentrum Karlsruhe (FIZ) to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.Database

Deposition numbers assigned by various journals to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getDepnumCcdcJournal() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Deposition numbers assigned by various journals to files containing structural information archived by the Cambridge Crystallographic Data Centre (CCDC).

getDepositionDataSetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The internal identifier assigned to each deposition.

getDepositionDataSetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The internal identifier assigned to each deposition.

getDepositionDate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date of the entry deposition

getDepositionSite() - Method in class org.rcsb.cif.schema.mm.EmAdmin

entry deposition site

getDepositorHoldInstructions() - Method in class org.rcsb.cif.schema.mm.EmDepui

Choose the manner in which you would like the map and associated files (half maps, additional maps, masks, FSC curves, structure factors, layer lines, and images) to be released.

getDepositSite() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The site where the file was deposited.

getDepReleaseCodeChemicalShifts() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The deposited chemical shift data for this deposition will be released according the value of this item.

getDepReleaseCodeCoordinates() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The deposited coordinates for this deposition will be released according the value of this item.

getDepReleaseCodeNmrConstraints() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The deposited NMR constrait data for this deposition will be released according the value of this item.

getDepReleaseCodeNmrData() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The deposited unified NMR data for this deposition will be released according the value of this item.

getDepReleaseCodeSequence() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The sequence information for this deposition will be released according the value of this item.

getDepReleaseCodeStructFact() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The deposited structure factors for this deposition will be released according the value of this item.

getDepSetId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

An internal identifier for a deposited data set.

getDerId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

This data item is a pointer to _phasing_MIR_der.id in the PHASING_MIR_DER category.

getDerId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

This data item is a pointer to _phasing_MIR_der.id in the PHASING_MIR_DER category.

getDerId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

This data item is a pointer to _phasing_MIR_der.id in the PHASING_MIR_DER category.

getDerSetId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The data set that was treated as the derivative in this experiment.

getDescription() - Method in class org.rcsb.cif.schema.core.AtomSite

A description of special aspects of this site.

getDescription() - Method in class org.rcsb.cif.schema.core.AtomType

A description of the atom(s) designated by this atom type.

getDescription() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

Description of the type of diffraction radiation detector.

getDescription() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Description of a reflection class.

getDescription() - Method in class org.rcsb.cif.schema.core.DiffrnSource

The general class of the source of radiation.

getDescription() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Description of the quality and habit of the crystal.

getDescription() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Description of a reflection class.

getDescription() - Method in class org.rcsb.cif.schema.mm.AtomType

A description of the atom(s) designated by this atom type.

getDescription() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

Description of each reflection class.

getDescription() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

A description of the quality and habit of the crystal.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

Textual description of the protocol step.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

Additional description regarding the model representation.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

An author provided description for the residue position in the polymer.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

Textual description of the pseudo site.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

Additional description regarding the starting model.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmStructAssembly

Description of the structural assembly.

getDescription() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

Additional description regarding the class.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

Additional details describing the revision.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column description.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

Description of this molecule.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Description of this molecule.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDelivery

The description of the mechanism by which the specimen in placed in the path of the source.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

For a fixed target sample, a description of sample preparation

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, a description of the injector used to move the sample into the beam.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

The description of the group.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table description.

getDescription() - Method in class org.rcsb.cif.schema.mm.PdbxViewCategoryGroup

A description for this collection of categories.

getDescription() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

Description of each reflection class.

getDescription() - Method in class org.rcsb.cif.schema.mm.Software

Description of the software.

getDescriptor() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

This data item contains the descriptor value for this component.

getDescriptor() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

This data item contains the descriptor value for this component.

getDescriptor() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelDescriptor

This data item contains the descriptor value for this component.

getDescriptor() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

This data item contains the descriptor value for this entity.

getDescriptorType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

This data item contains the descriptor type.

getDetails() - Method in class org.rcsb.cif.schema.core.AtomSite

A description of special aspects of this site.

getDetails() - Method in class org.rcsb.cif.schema.core.Cell

Description of special aspects of the cell choice, noting possible alternative settings.

getDetails() - Method in class org.rcsb.cif.schema.core.Citation

Special aspects of the relationship of the data block contents to the literature item cited.

getDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

Special details of the diffraction measurement process.

getDetails() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

Description of special aspects of the radiation detector.

getDetails() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Description of special aspects of the diffraction measurement.

getDetails() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Information about the determination of the radiation diffrn_radiation_wavelength that is not conveyed completely by an enumerated value of _diffrn_radiation_wavelength.determination.

getDetails() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Information about the determination of the radiation diffrn_radiation_wavelength that is not conveyed completely by an enumerated value of _diffrn_radiation_wavelength.determination.

getDetails() - Method in class org.rcsb.cif.schema.core.DiffrnSource

A description of special aspects of the source.

getDetails() - Method in class org.rcsb.cif.schema.core.Exptl

Details of the experiment prior to intensity measurement.

getDetails() - Method in class org.rcsb.cif.schema.core.Geom

Description of geometry information not covered by the existing data names in the geometry categories, such as least-squares planes.

getDetails() - Method in class org.rcsb.cif.schema.core.Refine

Details of the refinement not specified by other data items.

getDetails() - Method in class org.rcsb.cif.schema.core.Reflns

Description of the properties of the REFLN reflection list that is not given in other data items.

getDetails() - Method in class org.rcsb.cif.schema.core.ValenceParam

Details of valence parameters of stated bond.

getDetails() - Method in class org.rcsb.cif.schema.mm.AtomSite

A description of special aspects of this site.

getDetails() - Method in class org.rcsb.cif.schema.mm.AtomSitesAlt

A description of special aspects of the modelling of atoms in alternative conformations.

getDetails() - Method in class org.rcsb.cif.schema.mm.AtomSitesAltEns

A description of special aspects of the ensemble structure generated from atoms with various alternative IDs.

getDetails() - Method in class org.rcsb.cif.schema.mm.Cell

A description of special aspects of the cell choice, noting possible alternative settings.

getDetails() - Method in class org.rcsb.cif.schema.mm.ChemCompLink

A description of special aspects of a link between chemical components in the structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.ChemLink

A description of special aspects of a link between chemical components in the structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.Citation

A description of special aspects of the relationship of the contents of the data block to the literature item cited.

getDetails() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRevRecord

A description of special aspects of the revision of records in this PDB entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

A description of special aspects of this TVECT.

getDetails() - Method in class org.rcsb.cif.schema.mm.Diffrn

Special details of the diffraction measurement process.

getDetails() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

A description of special aspects of the radiation detector.

getDetails() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

A description of special aspects of the intensity measurement.

getDetails() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

A description of special aspects of the radiation source used.

getDetails() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

Any additional details used for selecting observed assemblies.

getDetails() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

Any additional details regarding fitting of atomic coordinates into the 3DEM volume, including data and considerations from other methods used in computation of the model.

getDetails() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

Details about the model used in fitting.

getDetails() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

Any additional details used in the 3d reconstruction.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmAdmin

EMDB administration details

getDetails() - Method in class org.rcsb.cif.schema.mm.EmAssembly

Any additional details describing the imaged sample.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmBuffer

Additional details about the buffer.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Description of growth of a 2D, 3D, or helical crystal array.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Any additional details about CTF correction

getDetails() - Method in class org.rcsb.cif.schema.mm.EmDbReference

A description of the related entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmDetector

Any additional information about the detection system.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Any addition details about the structure factor measurements

getDetails() - Method in class org.rcsb.cif.schema.mm.EmEmbedding

Staining procedure used in the specimen preparation.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

Additional details about the component.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Any additional details about euler angle assignment

getDetails() - Method in class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

Details about the image file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

Additional details about the final 2D classification

getDetails() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Additional details about FIB milling

getDetails() - Method in class org.rcsb.cif.schema.mm.EmFscCurve

Details about the FSC file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

Any other details regarding the helical assembly

getDetails() - Method in class org.rcsb.cif.schema.mm.EmHighPressureFreezing

Additional details about high pressure freezing.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmImageProcessing

Method details.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

Any additional details about image recording.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmImageScans

Any additional details about image recording.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmImaging

Any additional imaging details.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmInterpretFigure

Details about the image file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmLayerLines

Details about the layer line file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

Details about the layer line file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmObsolete

Details

getDetails() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

Any additional details used for selecting particles

getDetails() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

Details of the specimen preparation

getDetails() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

Any additional details concerning the sample support.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmShadowing

Additional details about specimen shadowing

getDetails() - Method in class org.rcsb.cif.schema.mm.EmSoftware

Details about the software used.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

A description of any additional details of the specimen preparation.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmStaining

Staining procedure used in the specimen preparation.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Any additional details about generating the startup model

getDetails() - Method in class org.rcsb.cif.schema.mm.EmStructureFactors

Details about the structure factor file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

Details about the structure factor file.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmSupersede

Details

getDetails() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

Any additional details about specimen preparation.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

Additional details about the ultramicrotomy sample preparation

getDetails() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

Additional details about this virus entity

getDetails() - Method in class org.rcsb.cif.schema.mm.EmVitrification

Any additional details relating to vitrification.

getDetails() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

Any additional details used for selecting volumes.

getDetails() - Method in class org.rcsb.cif.schema.mm.Entity

A description of special aspects of the entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.EntityLink

A description of special aspects of a link between chemical components in the structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

A description of special aspects of the organism from which the entity was isolated.

getDetails() - Method in class org.rcsb.cif.schema.mm.EntryLink

A description of the relationship between the data blocks identified by _entry_link.id and _entry_link.entry_id.

getDetails() - Method in class org.rcsb.cif.schema.mm.Exptl

Any special information about the experimental work prior to the intensity measurement.

getDetails() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

A description of special aspects of the crystal growth.

getDetails() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

A description of any special aspects of the solution component.

getDetails() - Method in class org.rcsb.cif.schema.mm.Geom

A description of geometry not covered by the existing data names in the GEOM categories, such as least-squares planes.

getDetails() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Details of how the 2DEM restraint is applied in the modeling algorithm.

getDetails() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

Additional details regarding the model to map fitting.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

Additional details regarding the chemical component.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

Additional details regarding the cross link or the cross linking agent.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

This records holds any associated details of the results of the particular crosslink restraint in the integrative modeling task.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroup

Additional details regarding the dataset group.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmDatasetList

Details regarding the dataset, especially those types not listed in _ihm_dataset_list.data_type.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

Details regarding the dataset entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

Additional details regarding the ensemble.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

Additional details regarding the EPR restraint used.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

Additional textual details regarding the external file.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

Additional details regarding the external reference.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmFeatureList

Additional details regarding the feature.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

Additional details about the geometric object distance restraints, especially if _ihm_geometric_object_distance_restraint.restraint_type or _ihm_geometric_object_distance_restraint.object_characteristic is "other".

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

Additional details regarding the HDX restraint.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

Additional details regarding the interface residue.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmLigandProbe

Additional details regarding the ligand probe.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmModelGroup

Additional details about the collection of models.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

Additional details regarding post processing.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocol

Additional details about the modeling protocol.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentation

Additional details about the model representation.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

Additional textual details of the multi-state modeling, if required.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

Additional details regarding the conjugate.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

Additional details regarding the missing segments.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

Additional details regarding the SAS restraint used.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

Additional details regarding the starting comparative models.

getDetails() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

A description of special aspects of the point differences between the sequence of the entity or biological unit described in the data block and that in the starting model referenced from a database.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

Further details describing the revision.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

Additional details regarding the funding of this entry

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxBuffer

Any additional details to do with buffer.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

Any additional details to do with buffer composition.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

Additional details decribing this change.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

This data item contains additional details about this component.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

Additional details decribing this change.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompRelated

Describes the type of relationship

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

Additional details about the construct that cannot be represented in the category _pdbx_construct_feature.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

Details that describe the feature

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

Details related to the replaced or replacing entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

Special details about the current processing cycle.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

A description of the related entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

Special details about the current process status state.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

Any additional details of the calculations.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDccMapman

The details of the use of mapman by the DCC program.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDomain

A description of special aspects of the structural elements that comprise a domain.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

A description of special aspects of this linkage.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Special structural details about this entity instance.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

A description of special aspects of this linkage.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

Any details associated with this method of protein characterisation.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

Any details to be associated with this ligation step, e.g.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

Any details to be associated with this recombination step, e.g.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

String value containing details of the fractionation.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

String value containing details of the lysis protocol.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

Additional details of this process step.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

Additional details about the parameter

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

Details of this tag removal step.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

String value containing details of the refolding.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

A description of special aspects of the source for the synthetic entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

Additional details decribing this change.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

A description of special aspects of a linkage between these entities in this molecule.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

Additional details about this entity within this molecule.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

Additional details describing the molecule.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

Additional details describing the molecule.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Text describing the reported assigned chemical shifts.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

Text providing additional information regarding the reported chemical shift referencing values or methods.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

General details describing conditions of both the sample and the environment during measurements.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRefine

Additional details about the NMR refinement.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

Brief description of the sample providing additional information not captured by other items in the category.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

Text description of the software.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Text describing the reported list of spectral peaks.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

A text description of the NMR spectrometer.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

A description of the current post-processing cycle.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

Additional details decribing this change.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

A description of special aspects of a linkage between chemical components in the structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

Additional details about this entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

Additional details about this entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

A description of special aspects of this linkage.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

A description of special aspects of a linkage between these constituents in this linked entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

A description of special aspects of a linkage between these constituents in this linked entity.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

A description of the TLS group, such as a domain name or a chemical group name.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

Additional details describing the content of the related data set and its application to the current investigation.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxReRefinement

Additional details about this re-refinement.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Any details pertinent to the fixed sample target

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A description of any additional details concerning the experiment.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

A description of special aspects of the macromolecular assembly.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

Provides any additional information regarding the evidence of this assembly

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

Provides any additional information regarding the evidence of this assembly

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

A description of special aspects of the macromolecular assembly.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

Additional details about this assembly property.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

Additional details about this assembly property.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

Special structural details about this chemical component.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

Special structural details about this chemical component.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructEntityInst

A description of special aspects of this portion of the contents of the deposited unit.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructInfo

Additional details about this information item.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

Text description of the linkage.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Details of the modification for this polymer component.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

A description of any special aspects of the deletion

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

A description of special aspects of the sequence alignment.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

A description of special aspects of the point differences between the sequence of the entity or biological unit described in the data block and that in the referenced database entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

A description of special aspects of the feature

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

A description of special aspects of the property value pair.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

A description of any special aspects of the insertion

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

Additional details describing the content of the supporting data set and its application to the current investigation.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

A description of the outlier angle e.g.

getDetails() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

A text description of any special details of the current version.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingAveraging

A description of special aspects of the averaging process.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingIsomorphous

A description of special aspects of the isomorphous phasing.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

A description of special aspects of the MAD phasing.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

A description of special aspects of the isomorphous-replacement phasing.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

A description of special aspects of this derivative, its data, its solution or its use in phasing.

getDetails() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

A description of special aspects of the derivative site.

getDetails() - Method in class org.rcsb.cif.schema.mm.Refine

Description of special aspects of the refinement process.

getDetails() - Method in class org.rcsb.cif.schema.mm.RefineBIso

A description of special aspects of the isotropic B-factor (displacement-parameter) refinement for the class of atoms described in _refine_B_iso.class.

getDetails() - Method in class org.rcsb.cif.schema.mm.RefineHist

A description of special aspects of this cycle of the refinement process.

getDetails() - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

A description of special aspects of the occupancy refinement for a class of atoms described in _refine_occupancy.class.

getDetails() - Method in class org.rcsb.cif.schema.mm.Reflns

A description of reflection data not covered by other data names.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructAsym

A description of special aspects of this portion of the contents of the asymmetric unit.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructBiol

A description of special aspects of the biological unit.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

A description of special aspects of the symmetry generation of this portion of the biological structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructBiolView

A description of special aspects of this view of the biological structure.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructConf

A description of special aspects of the conformation assignment.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructConn

A description of special aspects of the connection.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A description of special aspects of the residue, its conformation, behaviour in refinement, or any other aspect that requires annotation.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A description of special aspects of the residue, its conformation, behaviour in refinement, or any other aspect that requires annotation.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructNcsDom

A description of special aspects of the structural elements that comprise a domain in an ensemble of domains related by noncrystallographic symmetry.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructNcsEns

A description of special aspects of the ensemble.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

A description of special aspects of the noncrystallographic symmetry operator.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructRef

A description of special aspects of the relationship between the entity or biological unit described in the data block and that in the referenced database entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

A description of special aspects of the sequence alignment.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

A description of special aspects of the point differences between the sequence of the entity or biological unit described in the data block and that in the referenced database entry.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructSheet

A description of special aspects of the beta-sheet.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructSite

A description of special aspects of the site.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A description of special aspects of the symmetry generation of this portion of the structural site.

getDetails() - Method in class org.rcsb.cif.schema.mm.StructSiteView

A description of special aspects of this view of the site.

getDetails() - Method in class org.rcsb.cif.schema.mm.ValenceParam

Details of or comments on the bond-valence parameters.

getDetectiveQuantumEfficiency() - Method in class org.rcsb.cif.schema.mm.EmDetector

The detective_quantum_efficiency (DQE)is defined as the square of the signal-to-noise ratio in the recording device divided by the square of the signal-to-ratio in the electron beam: (SIGNAL/NOISE)2 recording device DQE = ------------------------------- (SIGNAL/NOISE)2 electron beam A DQE value of 1 indicates a perfect recorder.

getDetector() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

Description of the type of diffraction radiation detector.

getDetector() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The general class of the radiation detector.

getDetectorDistance() - Method in class org.rcsb.cif.schema.mm.EmImaging

The camera length (in millimeters).

getDetectorDtime() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

The maximum time between two detector signals that cannot be resolved.

getDetectorId() - Method in class org.rcsb.cif.schema.mm.EmImaging

The value of _em_imaging.detector_id must uniquely identify the type of detector used in the experiment.

getDetectorMode() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The detector mode used during image recording.

getDetectorSpecific() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The particular radiation detector.

getDetectorSpecific() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The particular radiation detector.

getDetectorType() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The general class of the radiation detector.

getDetectorType() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The general class of the radiation detector.

getDetectSlitHoriz() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Total slit aperture angle in the diffraction plane.

getDetectSlitHoriz() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Total slit aperture in degrees in the diffraction plane.

getDetectSlitVert() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Total slit aperture angle perpendicular to the diffraction plane.

getDetectSlitVert() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Total slit aperture in degrees perpendicular to the diffraction plane.

getDetermination() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Method by which the radiation wavelength was determined.

getDetermination() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Method by which the radiation wavelength was determined.

getDev() - Method in class org.rcsb.cif.schema.mm.ChemCompChirAtom

The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.

getDev() - Method in class org.rcsb.cif.schema.mm.ChemLinkChirAtom

The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.

getDevice() - Method in class org.rcsb.cif.schema.core.Diffrn

Type of goniometer device used to mount and orient the specimen.

getDevice() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Type of goniometer device used to mount and orient the specimen.

getDevice() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Enumerated code for the device providing the source of radiation.

getDevice() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

The general class of goniometer or device used to support and orient the specimen.

getDeviceClass() - Method in class org.rcsb.cif.schema.core.Diffrn

Type of goniometer device used to mount and orient the specimen.

getDeviceClass() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Type of goniometer device used to mount and orient the specimen.

getDeviceDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

Details of the goniometer device used in the diffraction experiment.

getDeviceDetails() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Details of the goniometer device used in the diffraction experiment.

getDeviceDetails() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

A description of special aspects of the device used to measure the diffraction intensities.

getDeviceMake() - Method in class org.rcsb.cif.schema.core.Diffrn

The make, model or name of the goniometer device used.

getDeviceMake() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

The make, model or name of the goniometer device used.

getDeviceType() - Method in class org.rcsb.cif.schema.core.Diffrn

The make, model or name of the goniometer device used.

getDeviceType() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

The make, model or name of the goniometer device used.

getDeviceType() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

The make, model or name of the measurement device (goniometer) used.

getDevIdeal() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

For the given parameter type, the root-mean-square deviation between the ideal values used as restraints in the least-squares refinement and the values obtained by refinement.

getDevIdealTarget() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

For the given parameter type, the target root-mean-square deviation between the ideal values used as restraints in the least-squares refinement and the values obtained by refinement.

getDiagnosticMessage() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

Text of any diagnostic messages asssociated with the upload processing of the input data.

getDiameter() - Method in class org.rcsb.cif.schema.mm.EmFiducialMarkers

Diameter of the fiducial markers

getDiameter() - Method in class org.rcsb.cif.schema.mm.EmVirusShell

The value of the diameter (in angstroms) for this virus shell.

getDictLocation() - Method in class org.rcsb.cif.schema.core.AuditConform

File name or uniform resource locator (URL) where the conformant data dictionary resides.

getDictLocation() - Method in class org.rcsb.cif.schema.mm.AuditConform

A file name or uniform resource locator (URL) for the dictionary to which the current data block conforms.

getDictName() - Method in class org.rcsb.cif.schema.core.AuditConform

Name identifying highest-level data dictionary defining data names used in this file.

getDictName() - Method in class org.rcsb.cif.schema.mm.AuditConform

The string identifying the highest-level dictionary defining data names used in this file.

getDictVersion() - Method in class org.rcsb.cif.schema.core.AuditConform

Code for the version of data dictionary defining data names used in this file.

getDictVersion() - Method in class org.rcsb.cif.schema.mm.AuditConform

The version number of the dictionary to which the current data block conforms.

getDiffDensityMax() - Method in class org.rcsb.cif.schema.core.Refine

Maximum density value in a difference Fourier map.

getDiffDensityMax() - Method in class org.rcsb.cif.schema.mm.Refine

The maximum value of the electron density in the final difference Fourier map.

getDiffDensityMaxEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Maximum density value in a difference Fourier map.

getDiffDensityMaxEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.diff_density_max.

getDiffDensityMin() - Method in class org.rcsb.cif.schema.core.Refine

Miniumum density value in a difference Fourier map.

getDiffDensityMin() - Method in class org.rcsb.cif.schema.mm.Refine

The minimum value of the electron density in the final difference Fourier map.

getDiffDensityMinEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Miniumum density value in a difference Fourier map.

getDiffDensityMinEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.diff_density_min.

getDiffDensityRms() - Method in class org.rcsb.cif.schema.core.Refine

Root mean square density value in a difference Fourier map.

getDiffDensityRms() - Method in class org.rcsb.cif.schema.mm.Refine

The root-mean-square-deviation of the electron density in the final difference Fourier map.

getDiffDensityRmsEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Root mean square density value in a difference Fourier map.

getDiffDensityRmsEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.diff_density_rms.

getDiffraction() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The DICTIONARY group encompassing the CORE DIFFRACTION data items defined and used with in the Crystallographic Information Framework (CIF).

getDiffrChi() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Diffractometer angle setting when the perpendicular to the specified crystal face is aligned along a specified direction (e.g.

getDiffrChi() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

The chi diffractometer setting angle in degrees for a specific crystal face associated with _exptl_crystal_face.perp_dist.

getDiffrKappa() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Diffractometer angle setting when the perpendicular to the specified crystal face is aligned along a specified direction (e.g.

getDiffrKappa() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

The kappa diffractometer setting angle in degrees for a specific crystal face associated with _exptl_crystal_face.perp_dist.

getDiffrn() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the diffraction experiment.

getDiffrn() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN category record details about the diffraction data and their measurement.

getDiffrnAttenuator() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the attenuators used in the diffraction source.

getDiffrnAttenuator() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_ATTENUATOR category record details about the diffraction attenuator scales employed.

getDiffrnCollection() - Method in class org.rcsb.cif.schema.core.Computing

Description of software used to measure diffraction data.

getDiffrnDetector() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the detectors used in the in the measurement of diffraction intensities.

getDiffrnDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_DETECTOR category describe the detector used to measure the scattered radiation, including any analyser and post-sample collimation.

getDiffrnId() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

Code identifying a standard reflection used to monitor source intensity variations or crystal degradation or movement during data collection.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

This data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The diffraction data set identifier.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

The data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDelivery

The data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

The data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnId() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

The data item is a pointer to _diffrn.id in the DIFFRN category.

getDiffrnMeasurement() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the details of the diffraction measurement.

getDiffrnMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_MEASUREMENT category record details about the device used to orient and/or position the crystal during data measurement and the manner in which the diffraction data were measured.

getDiffrnOrient() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the orientation of the crystal axes to the diffractometer goniometer.

getDiffrnOrientMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the matrix specifying the orientation of the crystal axes to the diffractometer goniometer.

getDiffrnOrientMatrix() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_ORIENT_MATRIX category record details about the orientation matrix used in the measurement of the diffraction data.

getDiffrnOrientRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the reflections used to calculate the matrix which gives the orientation of the crystal axes to the diffractometer goniometer.

getDiffrnOrientRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_ORIENT_REFLN category record details about the reflections that define the orientation matrix used in the measurement of the diffraction intensities.

getDiffrnRadiation() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the wavelength of the radiation used in measuring diffraction intensities.

getDiffrnRadiation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_RADIATION category describe the radiation used in measuring the diffraction intensities, its collimation and monochromatization before the sample.

getDiffrnRadiationWavelength() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the wavelength of the radiation used in measuring diffraction intensities.

getDiffrnRadiationWavelength() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_RADIATION_WAVELENGTH category describe the wavelength of the radiation used to measure the diffraction intensities.

getDiffrnReduction() - Method in class org.rcsb.cif.schema.core.Computing

Description of software used to convert diffraction data to measured structure factors.

getDiffrnRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the reflection measurements, prior to data reduction and merging.

getDiffrnRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_REFLN category record details about the intensities in the diffraction data set identified by _diffrn_refln.diffrn_id.

getDiffrnReflns() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the overall reflection measurement information.

getDiffrnReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_REFLNS category record details about the set of intensities measured in the diffraction experiment.

getDiffrnReflnsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify different classes of reflections in the raw measured diffraction data.

getDiffrnReflnsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_REFLNS_CLASS category record details about the classes of reflections measured in the diffraction experiment.

getDiffrnReflnsTransfMatrix() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getDiffrnScaleGroup() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the groups of reflections in the raw measured diffraction data with different relative scales.

getDiffrnScaleGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_SCALE_GROUP category record details of the scaling factors applied to place all intensities in the reflection lists on a common scale.

getDiffrnSource() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify information about the radiation source.

getDiffrnSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_SOURCE category record details of the source of radiation used in the diffraction experiment.

getDiffrnStandard() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify information about the standard reflections used in the diffraction measurement process.

getDiffrnStandardRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the "standard" reflections measured repeatedly to monitor variations in intensity due to source flux, environment conditions or crystal quality.

getDiffrnStandardRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_STANDARD_REFLN category record details about the reflections treated as standards during the measurement of a set of diffraction intensities.

getDiffrnStandards() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getDiffrnStandards() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_STANDARDS category record details about the set of standard reflections used to monitor intensity stability during the measurement of diffraction intensities.

getDiffrPhi() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Diffractometer angle setting when the perpendicular to the specified crystal face is aligned along a specified direction (e.g.

getDiffrPhi() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

The phi diffractometer setting angle in degrees for a specific crystal face associated with _exptl_crystal_face.perp_dist.

getDiffrPsi() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Diffractometer angle setting when the perpendicular to the specified crystal face is aligned along a specified direction (e.g.

getDiffrPsi() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

The psi diffractometer setting angle in degrees for a specific crystal face associated with _exptl_crystal_face.perp_dist.

getDihedralAnglesRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The dihedral angle rmsd to the target values for the ensemble.

getDihedralAnglesRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error of the rmsd dihedral angles.

getDihedralLowerLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The lower limit to the threshold applied to this dihedral restraint in the integrative modeling task.

getDihedralLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The estimated standard deviation of the lower limit dihedral threshold applied.

getDihedralOverallMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for dihedrals (all atoms).

getDihedralOverallRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for dihedrals (all atoms).

getDihedralThresholdEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The estimated standard deviation of the dihedral threshold applied to the restraint.

getDihedralThresholdMean() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The dihedral threshold mean applied to the restraint.

getDihedralUpperLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The upper limit to the threshold applied to this dihedral restraint in the integrative modeling task.

getDihedralUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The estimated standard deviation of the upper limit dihedral threshold applied.

getDimensionHeight() - Method in class org.rcsb.cif.schema.mm.EmImageScans

height of scanned image

getDimensionsCol() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of columns in the map.

getDimensionsRow() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of rows in the map.

getDimensionsSec() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of sections in the map.

getDimensionWidth() - Method in class org.rcsb.cif.schema.mm.EmImageScans

width of scanned image

getDiscussion() - Method in class org.rcsb.cif.schema.core.Publ

The discussion section of the submitted paper.

getDiscussion() - Method in class org.rcsb.cif.schema.core.PublSection

The discussion section of the submitted paper.

getDisorderAssembly() - Method in class org.rcsb.cif.schema.core.AtomSite

A code which identifies a cluster of atoms that show long range positional disorder but are locally ordered.

getDisorderAssembly() - Method in class org.rcsb.cif.schema.mm.AtomSite

A code which identifies a cluster of atoms that show long-range positional disorder but are locally ordered.

getDisorderGroup() - Method in class org.rcsb.cif.schema.core.AtomSite

A code that identifies a group of positionally disordered atom sites that are locally simultaneously occupied.

getDisorderGroup() - Method in class org.rcsb.cif.schema.mm.AtomSite

A code which identifies a group of positionally disordered atom sites that are locally simultaneously occupied.

getDispersion() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The anomalous dispersion scattering factor in its complex form for this atom type and radiation by _diffrn_radiation_wavelength.value

getDispersionImag() - Method in class org.rcsb.cif.schema.core.AtomType

The imaginary component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getDispersionImag() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The imaginary component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getDispersionImagCu() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The imaginary component of the anomalous dispersion scattering factors for this atom type and Cu K alpha radiation

getDispersionImagMo() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The imaginary component of the anomalous dispersion scattering factors for this atom type and Mo K alpha radiation

getDispersionReal() - Method in class org.rcsb.cif.schema.core.AtomType

The real component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getDispersionReal() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The real component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getDispersionRealCu() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The real component of the anomalous dispersion scattering factors for this atom type and Cu K alpha radiation

getDispersionRealMo() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The real component of the anomalous dispersion scattering factors for this atom type and Mo K alpha radiation

getDispersionSource() - Method in class org.rcsb.cif.schema.core.AtomType

Reference to source of real and imaginary dispersion corrections for scattering factors used for this atom type.

getDispersionSource() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

Reference to source of real and imaginary dispersion corrections for scattering factors used for this atom type.

getDisplay() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to enumerate the display parameters used in the discipline.

getDisplayColour() - Method in class org.rcsb.cif.schema.core.AtomType

The display colour assigned to this atom type.

getDisplayColour() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to enumerate the display colour codes used in the discipline.

getDisplayColour() - Method in class org.rcsb.cif.schema.core.ModelSite

Display colour code assigned to this atom site.

getDisplayX() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

Cartesian coordinate (x) of the atom site in a chemical diagram.

getDisplayX() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The 2D Cartesian x coordinate of the position of this atom in a recognizable chemical diagram.

getDisplayY() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

Cartesian coordinate (y) of the atom site in a chemical diagram.

getDisplayY() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The 2D Cartesian y coordinate of the position of this atom in a recognizable chemical diagram.

getDist() - Method in class org.rcsb.cif.schema.core.GeomBond

Intramolecular bond distance between the sites identified by _geom_bond.id

getDist() - Method in class org.rcsb.cif.schema.core.GeomContact

Intermolecular distance between the atomic sites identified by _geom_contact.id

getDist() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed as the distance between the atoms specified by _chem_comp_tor.atom_id_1 and _chem_comp_tor.atom_id_4 in the referenced record in the CHEM_COMP_TOR list.

getDist() - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed as the distance between the atoms specified by _chem_link_tor.atom_id_1 and _chem_link_tor.atom_id_4 in the referenced record in the CHEM_LINK_TOR list.

getDist() - Method in class org.rcsb.cif.schema.mm.GeomBond

The intramolecular bond distance in angstroms.

getDist() - Method in class org.rcsb.cif.schema.mm.GeomContact

The interatomic contact distance in angstroms.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

The value of the close contact for the two atoms defined.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

The value of the close contact for the two atoms defined.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

The value of the polymer linkage for the two atoms defined.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

The value of the close contact for the two atoms defined.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

The value of the close contact for the two atoms defined.

getDist() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The intramolecular bond distance in angstroms.

getDistance() - Method in class org.rcsb.cif.schema.core.ChemicalConnBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a distance.

getDistance() - Method in class org.rcsb.cif.schema.core.GeomBond

Intramolecular bond distance between the sites identified by _geom_bond.id

getDistance() - Method in class org.rcsb.cif.schema.core.GeomContact

Intermolecular distance between the atomic sites identified by _geom_contact.id

getDistanceConstraintViolationMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

Describe the method used to calculate the distance constraint violation statistics, i.e.

getDistanceCutoffHigh() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrType

The upper limit in angstroms of the distance range applied to the current restraint type.

getDistanceCutoffLow() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrType

The lower limit in angstroms of the distance range applied to the current restraint type.

getDistanceDA() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceDASu() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceDH() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceDHSu() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceHA() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceHASu() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The lower limit to the distance threshold applied to this distance restraint in the integrative modeling task.

getDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The lower limit to the distance threshold, if applicable.

getDistanceLowerLimit() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The lower limit to the distance threshold applied to this predicted contact restraint in the integrative modeling task.

getDistanceLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The estimated standard deviation of the lower limit distance threshold applied to this distance restraint in the integrative modeling task.

getDistanceLowerLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The estimated standard deviation of the lower limit distance threshold, if applicable.

getDistanceProbability() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The real number that indicates the probability that the distance restraint is correct.

getDistanceRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The distance rmsd to the mean structure for the ensemble of structures.

getDistanceRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error in the distance rmsd.

getDistances() - Method in class org.rcsb.cif.schema.core.GeomAngle

The pair of distances between sites 1 - 2 and 2 - 3.

getDistances() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Distances between sites 1 - 2, 2 - 3 and 3 - 4.

getDistanceSu() - Method in class org.rcsb.cif.schema.core.GeomBond

Standard Uncertainty of the intramolecular bond distance between the sites identified by _geom_bond.id

getDistanceSu() - Method in class org.rcsb.cif.schema.core.GeomContact

Standard Uncertainty of the intermolecular distance between the atomic sites identified by _geom_contact.id

getDistanceThreshold() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The distance threshold applied to this crosslink in the integrative modeling task.

getDistanceThreshold() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

The distance threshold applied to this crosslink in the integrative modeling task.

getDistanceThresholdEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The estimated standard deviation of the distance threshold applied to the restraint.

getDistanceThresholdMean() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The distance threshold mean applied to the restraint.

getDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The upper limit to the distance threshold applied to this distance restraint in the integrative modeling task.

getDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The upper limit to the distance threshold, if applicable.

getDistanceUpperLimit() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The upper limit to the distance threshold applied to this predicted contact restraint in the integrative modeling task.

getDistanceUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The estimated standard deviation of the upper limit distance threshold applied to this distance restraint in the integrative modeling task.

getDistanceUpperLimitEsd() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The estimated standard deviation of the upper limit distance threshold, if applicable.

getDistDA() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistDA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The distance in angstroms between the donor- and acceptor-atom sites in a hydrogen bond.

getDistDAEsd() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistDAEsd() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The standard uncertainty (estimated standard deviation) in angstroms of _geom_hbond.dist_DA.

getDistDH() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistDH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The distance in angstroms between the donor- and hydrogen-atom sites in a hydrogen bond.

getDistDHEsd() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistDHEsd() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The standard uncertainty (estimated standard deviation) in angstroms of _geom_hbond.dist_DH.

getDistEsd() - Method in class org.rcsb.cif.schema.core.GeomBond

Standard Uncertainty of the intramolecular bond distance between the sites identified by _geom_bond.id

getDistEsd() - Method in class org.rcsb.cif.schema.core.GeomContact

Standard Uncertainty of the intermolecular distance between the atomic sites identified by _geom_contact.id

getDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

This data item is the standard deviation of the out-of-plane distance for this atom.

getDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

The standard uncertainty (estimated standard deviation) of _chem_comp_tor_value.dist.

getDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

The standard uncertainty (estimated standard deviation) of _chem_link_tor_value.dist.

getDistEsd() - Method in class org.rcsb.cif.schema.mm.GeomBond

The standard uncertainty (estimated standard deviation) of _geom_bond.dist.

getDistEsd() - Method in class org.rcsb.cif.schema.mm.GeomContact

The standard uncertainty (estimated standard deviation) of _geom_contact.dist.

getDistEsd() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The estimated standard deviation of _pdbx_virtual_bond.dist.

getDistHA() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistHA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The distance in angstroms between the hydrogen- and acceptor- atom sites in a hydrogen bond.

getDistHAEsd() - Method in class org.rcsb.cif.schema.core.GeomHbond

Standard Uncertainty of the set of data items which specify the distance between the three atom sites identified by _geom_hbond.id.

getDistHAEsd() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The standard uncertainty (estimated standard deviation) in angstroms of _geom_hbond.dist_HA.

getDisulfideBondConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of disulfide bond constraints used in the final structure calculation.

getDoi() - Method in class org.rcsb.cif.schema.core.Citation

The Digital Object Identifier (DOI) of the cited work.

getDomainId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

This data item is a pointer to _pdbx_domain.id in the PDBX_DOMAIN category.

getDomainId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

This data item is a pointer to _pdbx_entity_poly_domain.id in the PDBX_ENTITY_POLY_DOMAIN category.

getDomainId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

The value of _pdbx_feature_domain.id references a domain definition in category PDBX_DOMAIN.

getDomainId() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

An identifier for the twin domain.

getDomId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.

getDomId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.

getDomId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.

getDomId1() - Method in class org.rcsb.cif.schema.mm.StructNcsEnsGen

The identifier for the domain that will remain unchanged by the transformation operator.

getDomId2() - Method in class org.rcsb.cif.schema.mm.StructNcsEnsGen

The identifier for the domain that will be transformed by application of the transformation operator.

getDoseRate() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

ions per sq centimetre per second

getDpiFreeR() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The DPI calculated based on the free set, determined by REFMAC.

getDResHigh() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Highest resolution in reflection class i.e.

getDResHigh() - Method in class org.rcsb.cif.schema.core.Refine

Highest resolution for the reflections used in refinement.

getDResHigh() - Method in class org.rcsb.cif.schema.core.RefineLs

Highest resolution for the reflections used in refinement.

getDResHigh() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Highest resolution for the reflections in this class.

getDResHigh() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Highest resolution for the reflections in this class.

getDResHigh() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Highest resolution for the reflections in this shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

The smallest value in angstroms for the interplanar spacings for the reflections in each measured reflection class.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The highest resolution for the interplanar spacings in the resolution shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.d_res_high identifies high resolution

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.d_res_high records the highest resolution for the phasing set.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.d_res_high records the highest resolution for the phasing set.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.d_res_high records the higher resolution for the shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

The lowest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

The lowest value for the interplanar spacings for the reflection data used for this set of data.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The lowest value in angstroms for the interplanar spacings for the reflection data used for the native data set.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The lowest value for the interplanar spacings for the reflection data used for this derivative.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The lowest value for the interplanar spacings for the reflection data for this derivative in this shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The lowest value for the interplanar spacings for the reflection data in this shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.RefineHist

The lowest value for the interplanar spacings for the reflection data for this cycle of refinement.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the lowest value in angstroms for the interplanar spacings for the reflections used in the refinement.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The lowest value for the interplanar spacings for the reflection data in this shell.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the smallest value in angstroms for the interplanar spacings for the reflections used in the refinement.

getDResHigh() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The smallest value in angstroms for the interplanar spacings for the reflections in this shell.

getDResHighFit() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The highest resolution limit used for rigid body refinement after molecular replacement (MR) solution.

getDResHighRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.d_res_high_rotation identifies the highest resolution used for rotation search.

getDResHighTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.d_res_high_translation identifies the highest resolution used for translation search.

getDResLimits() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Resolution for the reflections in this shell stored as the list of lowest and highest values.

getDResLow() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Lowest resolution in reflection class i.e.

getDResLow() - Method in class org.rcsb.cif.schema.core.Refine

Lowest resolution for the reflections used in refinement.

getDResLow() - Method in class org.rcsb.cif.schema.core.RefineLs

Lowest resolution for the reflections used in refinement.

getDResLow() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Lowest resolution for the reflections in this class.

getDResLow() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Lowest resolution for the reflections in this class.

getDResLow() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Lowest resolution for the reflections in this shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

The largest value in angstroms of the interplanar spacings for the reflections for each measured reflection class.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The lowest resolution for the interplanar spacings in the resolution shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.d_res_low identifies low resolution

getDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.d_res_low records the lowerest resolution for phasing set.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.d_res_low records the lowerest resolution for phasing set.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.d_res_low records the lower resolution for the shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

The highest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

The highest value for the interplanar spacings for the reflection data used for this set of data.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The highest value in angstroms for the interplanar spacings for the reflection data used for the native data set.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The highest value for the interplanar spacings for the reflection data used for this derivative.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The highest value for the interplanar spacings for the reflection data for this derivative in this shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The highest value for the interplanar spacings for the reflection data in this shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.RefineHist

The highest value for the interplanar spacings for the reflection data for this cycle of refinement.

getDResLow() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the highest value in angstroms for the interplanar spacings for the reflections used in the refinement.

getDResLow() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The highest value for the interplanar spacings for the reflection data in this shell.

getDResLow() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the largest value in angstroms for the interplanar spacings for the reflections used in the refinement.

getDResLow() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The highest value in angstroms for the interplanar spacings for the reflections in this shell.

getDResLowFit() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The lowest resolution limit used for rigid body refinement after molecular replacement (MR) solution.

getDResLowRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.d_res_low_rotation identifies the lowest resolution used for rotation search.

getDResLowTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.d_res_low_translation identifies the lowest resolution used for translation search.

getDResolutionHigh() - Method in class org.rcsb.cif.schema.core.Reflns

Highest resolution for the final REFLN data set.

getDResolutionHigh() - Method in class org.rcsb.cif.schema.mm.Reflns

The smallest value for the interplanar spacings for the reflection data.

getDResolutionLow() - Method in class org.rcsb.cif.schema.core.Reflns

Lowest resolution for the final REFLN data set.

getDResolutionLow() - Method in class org.rcsb.cif.schema.mm.Reflns

The largest value for the interplanar spacings for the reflection data.

getDropletHits() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of frames collected in which a droplet was hit.

getDSpacing() - Method in class org.rcsb.cif.schema.core.Refln

The distance in angstroms between lattice planes in the crystal with the indices _refln.hkl for this reflection.

getDSpacing() - Method in class org.rcsb.cif.schema.mm.Refln

The d spacing in angstroms for this reflection.

getDtime() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

The maximum time between two detector signals that cannot be resolved.

getDtime() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The deadtime in microseconds of the detector used to measure the diffraction intensities.

getDualTiltAxisRotation() - Method in class org.rcsb.cif.schema.mm.EmTomography

Angular difference between axis1 and axis2 in degrees

getDuration() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Milling time in seconds (is seconds most appropriate unit?)

getDyad() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

Value should be YES if a the filament has two-fold symmetry perpendicular to the helical axis.

getDyadAxis() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Two-fold symmetry perpendicular to the helical axis.

getDyadAxis() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Two-fold symmetry perpendicular to the helical axis.

getEbiCell() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The cell from which the component was obtained.

getEbiCellularLocation() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The cellular location of the component.

getEbiEngineered() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

A flag to indicate whether the component is engineered.

getEbiExpressionSystem() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The expression system used to produce the component.

getEbiExpressionSystemPlasmid() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The plasmid used to produce the component.

getEbiOrganelle() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The organelle from which the component was obtained.

getEbiOrganismCommon() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The common name of the species of the natural organism from which the component was obtained.

getEbiOrganismScientific() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The species of the natural organism from which the component was obtained.

getEbiStrain() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The strain of the natural organism from which the component was obtained, if relevant.

getEbiTissue() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The tissue of the natural organism from which the component was obtained.

getEdgeDescription() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

Description of the edge.

getEdgeId() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

An identifier that describes an edge in a directed graph, which represents an ordered ensemble.

getEditAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

The identifier for the edited atom in the generated component.

getEditAtomValue() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

The value for the edited atomic property value in the generated component.

getEditBondValue() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

The value for the edited bond property value in the generated component.

getEditOp() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

The operation applied to the named imported component.

getEditOp() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

The operation or assignment applied to the named imported component.

getElapsedTime() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Elapsed time from the start to the end of the intensity measurement.

getElapsedTime() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Elapsed time in minutes from the start of the diffraction experiment to the measurement of this intensity.

getElectronBeamTiltParams() - Method in class org.rcsb.cif.schema.mm.EmImaging

electron beam tilt params

getElectronCount() - Method in class org.rcsb.cif.schema.core.AtomType

Number of electrons in this atom type.

getElectronDose() - Method in class org.rcsb.cif.schema.mm.EmImaging

The electron dose received by the specimen (electrons per square angstrom).

getElectronSource() - Method in class org.rcsb.cif.schema.mm.EmImaging

The source of electrons.

getElement() - Method in class org.rcsb.cif.schema.core.PublBody

The functional role of the associated text section.

getElement() - Method in class org.rcsb.cif.schema.mm.PublBody

The functional role of the associated text section.

getElementSymbol() - Method in class org.rcsb.cif.schema.core.AtomType

Element symbol for of this atom type.

getElutionBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getElutionProtocol() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

Details of the elution protocol.

getEm2dCrystalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_SYMMETRY_2DX category record 2D crystal symmetry parameters utilized in a 3DEM reconstruction.

getEm2dProjectionSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_2D_PROJECTION_SELECTION category record details of images from scanned micrographs and the number of particles selected from a scanned set of micrographs.

getEm3dCrystalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_SYMMETRY_3DX category record 3D crystal symmetry parameters utilized in 3DEM reconstruction averaging.

getEm3dFitting() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the 3D_FITTING category record details of the method of fitting atomic coordinates from a PDB file into a 3d-em volume map file

getEm3dFittingList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the 3D_FITTING_LIST category lists the methods of fitting atomic coordinates from a PDB file into a 3d-em volume map file

getEm3dReconstruction() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_3D_RECONSTRUCTION category record details of the 3D reconstruction procedure from 2D projections.

getEmAdmin() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Administration-related data items

getEmail() - Method in class org.rcsb.cif.schema.core.AuditContactAuthor

The electronic mail address of the author of the data block to whom correspondence should be addressed, in a form recognizable to international networks.

getEmail() - Method in class org.rcsb.cif.schema.core.Journal

The email address of the coeditor.

getEmail() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The email address of the coeditor.

getEmail() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Email address of the technical editor for this publication.

getEmail() - Method in class org.rcsb.cif.schema.core.Publ

E-mail address in a form recognizable to international networks.

getEmail() - Method in class org.rcsb.cif.schema.core.PublAuthor

The e-mail address of a publication author.

getEmail() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

E-mail address in a form recognizable to international networks.

getEmail() - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

The electronic mail address of the author of the data block to whom correspondence should be addressed, in a form recognizable to international networks.

getEmail() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The electronic mail address of the author of the data block to whom correspondence should be addressed, in a form recognisable to international networks.

getEmail() - Method in class org.rcsb.cif.schema.mm.PublAuthor

The e-mail address of a publication author.

getEmAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_ASSEMBLY category record details about the imaged EM sample.

getEmAuthorList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category to collect the authors of this entry

getEmbeddingApplied() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

'YES' indicates that the specimen has been embedded.

getEmBuffer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the BUFFER category record details of the sample buffer.

getEmBufferComponent() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Buffer category

getEmCrystalFormation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of growth of a 2D, 3D, or helical crystal array.

getEmCtfCorrection() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of the Contrast Transfer Function (CTF) correction

getEmdbId() - Method in class org.rcsb.cif.schema.mm.EmStartModel

EMDB id of the map used as the startup model

getEmDbReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds links to raw data sources for the entry, e.g., held by a remote server.

getEmDbReferenceAuxiliary() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds links to raw data sources for the entry, e.g., held by a remote server.

getEmDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_DEPOSITOR INFO category record parameters for EM depositions that are provided by the depositor

getEmDepui() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Some internal items to power the deposition interface

getEmDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_DETECTOR category record details of the image detector type.

getEmDiffraction() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Microscopy parameters relevant only for crystallography

getEmDiffractionShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Statistical parameters for electron diffraction measurements within a resolution shell

getEmDiffractionStats() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Statistical parameters for electron diffraction measurements

getEmDiffractionStatsId() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Pointer to EM CRYSTALLOGRAPHY STATS

getEmEmbedding() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Sugar embedding category

getEmEntityAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_ENTITY_ASSEMBLY category record details about each component of the complex.

getEmEntityAssemblyMolwt() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record details about the molecular weight of an assembly component of the sample.

getEmEntityAssemblyNaturalsource() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record taxonomic details about the natural source for EM assemblies and assembly components.

getEmEntityAssemblyRecombinant() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record details about recombinant expression of the assembly or assembly component.

getEmEulerAngleAssignment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category to describe the euler angle assignement

getEmExperiment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_EXPERIMENT category provide high-level classification of the EM experiment.

getEmFiducialMarkers() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of fiducial markers.

getEmFigureDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Listing of image files (figures) associated with an EMDB entry

getEmFinalClassification() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Information about the final image classification

getEmFocusedIonBeam() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of sectioning by focused_ion_beam

getEmFscCurve() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EMD_VALIDATION_FSC_CURVE category record details of the Fourier Shell Correlation (FSC) curve file.

getEmGridPretreatment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items describing glow discharge pretreatment for an EM grid

getEmHelicalEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_HELICAL_ENTITY category record details for a helical or filament type of assembly component.

getEmHighPressureFreezing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of high pressure freezing

getEmImageProcessing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_IMAGE_PROCESSING category record details of the EM image processing procedure.

getEmImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Foreign key to the EM_IMAGE_PROCESSING category

getEmImageRecording() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_IMAGE_RECORDING category record details of the image recording (either film/microdensitometer or electronic detector) and parameters for image digitization.

getEmImageScans() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_IMAGE_SCANS category record details of the image scanning device (microdensitometer) and parameters for digitization of the image.

getEmImaging() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_IMAGING category record details about the parameters used in imaging the sample in the electron microscope.

getEmImagingOptics() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of a few specialist optics apparatus

getEmInterpretFigure() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Listing of all layer line files associated with the EM entry

getEmLayerLines() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Listing of all layer line files associated with the EM entry

getEmLayerLinesDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Listing of layer line files associated with the EM entry

getEmMap() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EMD_MAP category record parameters of the CCP4 binary-format map file header (see ftp://ftp.wwpdb.org/pub/emdb/doc/map_format/EMDB_mapFormat_v1.0.pdf), parameters derived from the map header, pixel size, contour level, and annotation details from the depositor.

getEmMapDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_MAP_DEPOSITOR INFO category record map parameters that are provided by the depositor

getEmMaskDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_MASK_DEPOSITOR_INFO category record mask parameters that are provided by the depositor

getEmMethodSelection() - Method in class org.rcsb.cif.schema.mm.EmDepositorInfo

The selected EM experimental method.

getEmObsolete() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

List of EMD entries made obsolete by this entry.

getEmParticleSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record details of images from scanned micrographs and the number of particles selected from a scanned set of micrographs.

getEmpty() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

Flag to indicate if the virus is empty or not.

getEmSamplePreparation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_SAMPLE_PREPARATION category record details of sample conditions prior to and upon loading onto grid support.

getEmSampleSupport() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_SAMPLE_SUPPORT category record details of the electron microscope grid type, grid support film and pretreatment of whole before sample is applied

getEmShadowing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items related to shadowing of an EM specimen

getEmSingleParticleEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_SINGLE_PARTICLE_ENTITY category provide the details of the symmetry for a single particle entity type.

getEmSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

getEmSpecimen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EMD_SPECIMEN category record details about specimens prepared for imaging by electron microscopy.

getEmStaining() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Staining category

getEmStartModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The startup model employed to begin refinement of the parameters for a 3DEM reconstruction

getEmStructureFactors() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Listing of all structure factor files associated with the EM entry

getEmStructureFactorsDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Structure factor files associated with the EM entry

getEmSupersede() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

List of newer entries that replace this entry.

getEmSupportFilm() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items to describe films supporting the specimen

getEmTomography() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Microscopy parameters only relevant for tomography

getEmTomographySpecimen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description specimen preparation for imaging using tomography.

getEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.EmFiducialMarkers

Foreign key relationship to the EMD SPECIMEN category

getEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Foreign key relationship to the EM TOMOGRAPHY SPECIMEN category

getEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.EmHighPressureFreezing

Foreign key relationship to the EMD SPECIMEN category

getEmTomographySpecimenId() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

Foreign key relationship to the EMD SPECIMEN category

getEmUltramicrotomy() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of sectioning by ultramicrotomy

getEmVirusEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_VIRUS_ENTITY category record details of the icosahedral virus.

getEmVirusNaturalHost() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record details of a virus entity.

getEmVirusShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EMD_VIRUS_SHELL category record details of the viral shell number, shell diameter, and icosahedral triangulation number.

getEmVitrification() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EM_VITRIFICATION category record details about the method and cryogen used in rapid freezing of the sample on the grid prior to its insertion in the electron microscope

getEmVolumeSelection() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Volume selection in image processing

getEnantioexcessBulk() - Method in class org.rcsb.cif.schema.core.Chemical

The enantioexcess of the bulk material from which the crystals were grown.

getEnantioexcessBulkTechnique() - Method in class org.rcsb.cif.schema.core.Chemical

Technique used to determine the enantioexcess of the bulk compound.

getEnantioexcessCrystal() - Method in class org.rcsb.cif.schema.core.Chemical

The enantioexcess of the crystal used for the diffraction study.

getEnantioexcessCrystalTechnique() - Method in class org.rcsb.cif.schema.core.Chemical

Technique used to determine the enantioexcess of the crystal.

getEncodedSourceDimensionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

Pointer to '_pdbx_nmr_spectral_dim.id'.

getEncoder() - Method in class org.rcsb.cif.CifOptions

The name of the encoder which should be written to files.

getEncoder() - Method in class org.rcsb.cif.model.binary.BinaryFile

Reports the encoder name that was used to create this file.

getEncoding() - Method in interface org.rcsb.cif.binary.data.EncodedData

All encodings registered for this piece of EncodedData.

getEncoding() - Method in class org.rcsb.cif.EncodingStrategyHint

Report the encoding strategy to employ.

getEncodingCode() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

Code describing how information from one spectral dimension has been encoded in another dimension in for example a reduced dimensionality experiment.

getEncodingStrategyHint(String, String) - Method in class org.rcsb.cif.CifOptions

Reports whether a particular encoding or floating-point precision is specified for this particular column.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range ends.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndAuthMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Monomer ID at the terminal position in the PDB sequence segment

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range ends.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Ending position in the PDB sequence segment

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndConstructId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getEndDbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

The terminal monomer type found at the ending position in the referenced database entry.

getEndDbSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

The terminal monomer sequence position in the referenced database entry.

getEndianType() - Method in class org.rcsb.cif.schema.mm.EmMap

map file endian type

getEndInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Insertion code.

getEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDomainRange

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

A component of the identifier for the monomer at which this segment of the sequence range ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A component of the identifier for the monomer at which this segment of the domain ends.

getEndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta-sheet range ends.

getEndMonId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

The value of _pdbx_entity_poly_domain.begin_mon_id identifies the monomer at the end of the domain.

getEndPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Terminal insertion code of the PDB sequence segment.

getEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A component of the identifier for the residue at which the TLS fragment range ends.

getEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getEndResNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

Last residue number.

getEndSeq() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The sequence position at which the feature ends

getEndSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

The value of _pdbx_entity_poly_domain.begin_seq_num identifies the sequence position of the end of the domain.

getEndSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The ending polymer sequence position for the polymer section corresponding to this source.

getEndSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Ending position in the sequence segment

getEndYear() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

Year in which publication terminated operation.

getEnergyFilter() - Method in class org.rcsb.cif.schema.mm.EmImaging

The type of energy filter spectrometer apparatus.

getEnergyfilterLower() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

The energy filter range lower value in electron volts (eV) set by spectrometer.

getEnergyfilterName() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

The type of energy filter spectrometer

getEnergyfilterSlitWidth() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

The energy filter range slit width in electron volts (eV).

getEnergyfilterUpper() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

The energy filter range upper value in electron volts (eV) set by spectrometer.

getEnergyWindow() - Method in class org.rcsb.cif.schema.mm.EmImaging

The energy filter range in electron volts (eV)set by spectrometer.

getEnsembleClusteringFeature() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

The parameter/feature used for clustering the models, if applicable.

getEnsembleClusteringMethod() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

The clustering method used to obtain the ensemble, if applicable.

getEnsembleFileId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

A reference to the external file containing the structural models in the ensemble.

getEnsembleFlag() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A flag to indicate if the modeling involves an ensemble.

getEnsembleId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

An identifier for the ensemble whose results are described.

getEnsembleId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

A unique id for the ensemble.

getEnsembleId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

The ensemble identifier corresponding to the sub sample.

getEnsembleId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The ensemble id corresponding to the gaussian object.

getEnsembleId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

The ensemble identifier for the ensemble, for which the localization density is provided.

getEnsembleName() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

An optional name for the cluster or ensemble for better description.

getEnsemblePrecisionValue() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

The precision of each cluster or ensemble is calculated as dRMSD, which is the average C-alpha distance root mean square deviation (dRMSD) between the individual models in the cluster and the cluster centroid.

getEnsId() - Method in class org.rcsb.cif.schema.mm.AtomSitesAltGen

This data item is a pointer to _atom_sites_alt_ens.id in the ATOM_SITES_ALT_ENS category.

getEnsId() - Method in class org.rcsb.cif.schema.mm.StructNcsEnsGen

This data item is a pointer to _struct_ncs_ens.id in the STRUCT_NCS_ENS category.

getEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY category record details (such as chemical composition, name and source) about the molecular entities that are present in the crystallographic structure.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Corresponding key in _em_entity_assembly category.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

A reference to _em_entity_assembly.id which uniquely identifies one assembly or assembly component of the imaged sample.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

Pointer to the assembly component defined in the EM ENTITY ASSEMBLY category.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

Pointer to the expressed component described in the EM ENTITY ASSEMBLY category.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmExperiment

Foreign key to the EM_ENTITY_ASSEMBLY category

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

The value of _em_helical_entity.entity_assembly_id identifies a particular assembly component.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

This data item is a pointer to _entity_assembly.id in the em_entity_assembly category.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

This data item is a pointer to _em_virus_entity.id in the ENTITY_ASSEMBLY category.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

Pointer to _em_entity_assembly.id.

getEntityAssemblyId() - Method in class org.rcsb.cif.schema.mm.EmVirusShell

The value of _em_virus_shell.entity_assembly_id is a pointer to _em_entity_assembly.id category.

getEntityAsymId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

An asym/strand identifier for the entity molecule.

getEntityBranchListNum1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The component number for the first component making the linkage.

getEntityBranchListNum2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The component number for the second component making the linkage.

getEntityCompNum1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The component number for the first component making the linkage.

getEntityCompNum2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The component number for the second component making the linkage.

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

A text description of the molecular entity.

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

A text description of the molecular entity

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

Description of the entity.

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

A text description of the molecular entity, whose residues are not modeled.

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

A text description of the molecular entity

getEntityDescription() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

A text description of the molecular entity

getEntityDescription1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

A text description of molecular entity 1.

getEntityDescription1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

A text description of molecular entity 1.

getEntityDescription2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

A text description of molecular entity 2.

getEntityDescription2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

A text description of molecular entity 2.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntityNameCom

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntityNameSys

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntityPoly

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntityPolySeq

This data item is a pointer to _entity_poly.entity_id in the ENTITY_POLY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

A unique identifier for the polymeric entity.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The entity identifier corresponding to this gaussian object.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The entity identifier corresponding to this gaussian object.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The entity identifier.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmLigandProbe

The entity id of the ligand.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

The entity identifier corresponding to this localization density.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

A unique identifier distinct molecular entities.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

The entity identifier of the non-polymer feature.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

The entity identifier of the atom.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

A unique identifier for the entity where the probe is attached.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The entity identifier for residue / residue range.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

A unique identifier to the molecular entity, whose residues are not modeled.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The entity identifier corresponding to this sphere object.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The entity identifier corresponding to this coordinate position.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

A unique identifier for the distinct molecular entities.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

A unique identifier for the distinct molecular entities.

getEntityId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

A unique identifier for distinct molecular entities.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

In cases where the construct IS found in the co-ordinates then this item provides a pointer to _entity.id in the ENTITY category for the corresponding molecule.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityFeatures

A reference to the _entity.id in the ENTITY category

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

A reference to the _entity.id in the ENTITY_POLY category

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityAssembly

An enity identifier.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranch

The entity id for this branched entity.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

This data item is a pointer to _entity_poly.entity_id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The entity id for this branched entity.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchList

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityName

Pointer to _entity.id.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds the entity_id of this entity within the entry.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNonpoly

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The entity id for this branched entity.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaNonstandard

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaType

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyProteinClass

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

The value of _pdbx_entity_prod_protocol.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

The value of _pdbx_entity_src_gen_character.entity_id uniquely identifies each protein contained in the project target complex proteins whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The value of _pdbx_entity_src_gen_chrom.entity_id uniquely identifies each protein contained in the project target complex proteins whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The value of _pdbx_entity_src_gen_clone.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

This item is a pointer to _pdbx_entity_src_gen_clone.entity_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

This item is a pointer to _pdbx_entity_src_gen_clone.entity_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The entity id for this chimeric entity.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The value of _pdbx_entity_src_gen_express.entity_id uniquely identifies each protein contained in the project target complex proteins whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

The value of _pdbx_entity_src_gen_express_timepoint.entity_id is a pointer to _pdbx_entity_src_gen_express.entity_id

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The value of _pdbx_entity_src_gen_fract.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The value of _pdbx_entity_src_gen_lysis.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

The value of _pdbx_entity_src_gen_prod_digest.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

The value of _pdbx_entity_src_gen_prod_other.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

The value of _pdbx_entity_src_gen_prod_other_parameter.entity_id is a pointer to _pdbx_entity_src_gen_prod_other.entity_id

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

The value of _pdbx_entity_src_gen_prod_pcr.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The value of _pdbx_entity_src_gen_proteolysis.entity_id uniquely identifies each protein contained in the project target complex proteins whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The value of _pdbx_entity_src_gen_pure.entity_id uniquely identifies each protein contained in the project target complex proteins whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

The value of _pdbx_entity_src_gen_refold.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

The value of _pdbx_linked_entity_list.ref_entity_id is a unique identifier the a constituent entity within this reference molecule.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

The value of _pdbx_molecule_features_depositor_info.entity_id is a reference to to the entity identifier for this molecule.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

Pointer to _atom_site.label_entity_id.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Pointer to _entity.id.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxPrereleaseSeq

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

This data item is a pointer to _entity_poly.entity_id in the ENTITY_POLY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxStructEntityInst

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId() - Method in class org.rcsb.cif.schema.mm.StructRef

This data item is a pointer to _entity.id in the ENTITY category.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.EntityLink

The entity ID of the first of the two entities joined by the link.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The entity identifier for the first monomer partner in the cross link This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The entity identifier for the first monomer partner in the cross link This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category and the _ihm_cross_link_restraint.entity_id_1 in the IHM_CROSS_LINK_RESTRAINT category.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The entity identifier for the first monomer partner in the predicted contact.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The entity identifier for the first atom in the interaction.

getEntityId1() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The entity id of the first of the two entities joined by the linkage.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.EntityLink

The entity ID of the second of the two entities joined by the link.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The entity identifier for the second monomer partner in the cross link This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The entity identifier for the second monomer partner in the cross link This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category and the _ihm_cross_link_restraint.entity_id_2 in the IHM_CROSS_LINK_RESTRAINT category.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The entity identifier for the second monomer partner in the predicted contact.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The entity identifier for the second atom in the interaction.

getEntityId2() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The entity id of the second of the two entities joined by the linkage.

getEntityIdList() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

macromolecules associated with this component, if defined as comma separated list of entity ids (integers).

getEntityInstId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

This data item is a pointer to _pdbx_struct_entity_inst.id in the PDBX_STRUCT_ENTITY_INST category.

getEntityInstId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAsymGen

This data item is a pointer to _pdbx_struct_entity_inst.id in the PDBX_STRUCT_ENTITY_INST category.

getEntityInstId() - Method in class org.rcsb.cif.schema.mm.PdbxStructMsymGen

This data item is a pointer to _pdbx_struct_entity_inst.id in the PDBX_STRUCT_ENTITY_INST category.

getEntityKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_KEYWORDS category specify keywords relevant to the molecular entities.

getEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_LINK category give details about the links between entities.

getEntityNameCom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_NAME_COM category record the common name or names associated with the entity.

getEntityNameSys() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_NAME_SYS category record the systematic name or names associated with the entity and the system that was used to construct the systematic name.

getEntityPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_POLY category record details about the polymer, such as the type of the polymer, the number of monomers and whether it has nonstandard features.

getEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

The identifier for the polymeric segment corresponding to this localization density.

getEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The identifier for the polymeric segment in the representation.

getEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

The identifier for the polymeric segment modeled using this starting model.

getEntityPolySegmentId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

The identifier for the polymeric segment in the assembly.

getEntityPolySeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_POLY_SEQ category specify the sequence of monomers in a polymer.

getEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.EntityLink

For a polymer entity, the sequence number in the first of the two entities containing the link.

getEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

For a polymer entity, the sequence number in the first of the two entities containing the linkage.

getEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

For a polymer entity, the sequence number in the first of the two entities containing the linkage.

getEntitySeqNum1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

For a polymer entity, the sequence number in the first of the two components making the linkage.

getEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.EntityLink

For a polymer entity, the sequence number in the second of the two entities containing the link.

getEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

For a polymer entity, the sequence number in the second of the two entities containing the linkage.

getEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

For a polymer entity, the sequence number in the second of the two entities containing the linkage.

getEntitySeqNum2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

For a polymer entity, the sequence number in the second of the two components making the linkage.

getEntitySrcGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_SRC_GEN category record details of the source from which the entity was obtained in cases where the source was genetically manipulated.

getEntitySrcNat() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTITY_SRC_NAT category record details of the source from which the entity was obtained in cases where the entity was isolated directly from a natural tissue.

getEntityType() - Method in class org.rcsb.cif.schema.mm.IhmFeatureList

The type of entity.

getEntry() - Method in class org.rcsb.cif.schema.mm.EmObsolete

Entry made obsolete

getEntry() - Method in class org.rcsb.cif.schema.mm.EmSupersede

Newer entry that replaces this entry

getEntry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

There is only one item in the ENTRY category, _entry.id.

getEntryCode() - Method in class org.rcsb.cif.schema.core.DatabaseRelated

The code used by the database referred to in _database_related.database_id to identify the related dataset.

getEntryFittingList() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A list of the entries used to fit the model to the scattering data

getEntryId() - Method in class org.rcsb.cif.schema.mm.AtomSites

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Cell

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Chemical

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Computing

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Database

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

entry id

getEntryId() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

This data item is a pointer to _entry_id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmAdmin

This data item is a pointer to _entry.id.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmAssembly

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmDepositorInfo

This data item is a pointer to the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmDepui

Primary key

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmDetector

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmExperiment

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmImageScans

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmImaging

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmMap

This data item is a pointer to the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

This data item is a pointer to the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EmVitrification

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.EntryLink

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Exptl

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Geom

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Journal

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.NdbStructConfNa

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.NdbStructFeatureNa

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxAtlas

Entry ID.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxAudit

The value of _pdbx_audit.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

The value of _pdbx_construct.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The value of _pdbx_construct_feature.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxCoord

The entry identifier.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The value of _pdbx_database_message.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

A link to _ENTRY.id

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePdbOmit

The value of _pdbx_database_pdb_omit.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseProc

The value of _pdbx_database_proc.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The value of _pdbx_database_status.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

The value of _pdbx_database_status_history.entry_id identifies the entry data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

The value of _pdbx_data_processing_cell.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The value of _pdbx_data_processing_detector.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

The value of _pdbx_data_processing_reflns.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

The value of _pdbx_entity_prod_protocol.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

The value of _pdbx_entity_src_gen_character.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The value of _pdbx_entity_src_gen_chrom.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The value of _pdbx_entity_src_gen_clone.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

This item is a pointer to _pdbx_entity_src_gen_clone.entry_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

This item is a pointer to _pdbx_entity_src_gen_clone.entry_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The value of _pdbx_entity_src_gen_express.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

The value of _pdbx_entity_src_gen_express_timepoint.entry_id is a pointer to _pdbx_entity_src_gen_express.entry_id

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The value of _pdbx_entity_src_gen_fract.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The value of _pdbx_entity_src_gen_lysis.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

The value of _pdbx_entity_src_gen_prod_digest.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

The value of _pdbx_entity_src_gen_prod_other.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

The value of _pdbx_entity_src_gen_prod_other_parameter.entry_id is a pointer to _pdbx_entity_src_gen_prod_other.entry.id

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

The value of _pdbx_entity_src_gen_prod_pcr.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The value of _pdbx_entity_src_gen_proteolysis.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The value of _pdbx_entity_src_gen_pure.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

The value of _pdbx_entity_src_gen_refold.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

This item identifies the entry.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlPd

The value of _pdbx_exptl_pd.entry_id uniquely identifies a record in the PDBX_EXPTL_PD category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Pointer to '_entry.ID'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

The entry ID for the structure determination.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

You can leave this blank as an ID will be assigned by the MSD to the constraint file.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrDetails

The entry ID for the structure determination.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

Leave this blank as the ID is provided by the MSD

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

'?'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

You can leave this blank as an ID will be assigned by the RCSB.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRefine

You can leave this blank as an ID will be assigned by the RCSB to the constraint file.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRepresentative

msd will assign the ID.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftwareTask

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakSoftware

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrUpload

Pointer to '_entry.id'

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetry

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessDetails

The value of _pdbx_post_process_details.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

The value of _pdbx_post_process_status.entry_id identifies the data block.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxReRefinement

The identifier for entry where the experimental data was obtained.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Pointer to the entry id.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxSummaryFlags

Entry ID.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PhasingAveraging

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PhasingIsomorphous

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Publ

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.PublManuscriptIncl

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Refine

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Reflns

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Struct

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.StructKeywords

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.StructMonDetails

This data item is a pointer to _entry.id in the ENTRY category.

getEntryId() - Method in class org.rcsb.cif.schema.mm.Symmetry

This data item is a pointer to _entry.id in the ENTRY category.

getEntryLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the ENTRY_LINK category record the relationships between the current data block identified by _entry.id and other data blocks within the current file which may be referenced in the current data block.

getEnveloped() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

Flag to indicate if the virus is enveloped or not.

getEpsilon() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle epsilon (C4'-C3'-O3'-P).

getEquilibrationBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getError() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Details of any error or warning messages.

getErrorDerivationMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

Method used to derive the estimated error in the reported chemical shifts.

getEulerAnglesDetails() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

euler angles details

getExample() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column example.

getExperimental() - Method in class org.rcsb.cif.schema.core.Publ

The experimental section of the submitted paper.

getExperimental() - Method in class org.rcsb.cif.schema.core.PublSection

The experimental section of the submitted paper.

getExperimentalFlag() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

Identifies whether the given molecular weight was derived experimentally.

getExperimentalMethods() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

Comma separated list of supported experimental methods.

getExperimentalSupport() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

Provides the experimental method to determine the state of this assembly

getExperimentalSupport() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

Provides the experimental method to determine the state of this assembly

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

This data item optionally associates an image (figure) with an experiment.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmLayerLines

This data item is a pointer to the EM EXPERIMENT category.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

This data item is a pointer to the EMD_STRUCT category.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

This data item optionally associates a map with a data item in the EM_EXPERIMENT category.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

Pointer to _em_experiment.id.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmStructureFactors

This data item is a pointer to the EM EXPERIMENT category.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

This data item is an optional pointer to the EM_EXPERIMENT category.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

Pointer to '_pdbx_nmr_exptl.experiment.id'

getExperimentId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

A numerical ID for each experiment.

getExperimentId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Pointer to '_pdbx_nmr_exptl.experiment_id'

getExperimentName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

The name of an experiment used to determine the data reported.

getExperimentor() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

Name of experimentor.

getExperimentType() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

The type of multi-state modeling experiment carried out.

getExpressionSystemId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A unique identifier for the expression system.

getExptId() - Method in class org.rcsb.cif.schema.mm.PhasingMADClust

This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.

getExptId() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.

getExptId() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.

getExptl() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the experimental work prior to diffraction measurements.

getExptl() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EXPTL category record details about the experimental work prior to the intensity measurements and details about the absorption-correction technique employed.

getExptl13CShiftTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for 13C shift constraints term employed in the target function used for simulated annealing.

getExptl13CShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the 13C shift constraints term.

getExptl1HShiftTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for 1H shift constraints term employed in the target function used for simulated annealing.

getExptl1HShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the 1H shift constraints term.

getExptlAbsorpt() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the experimental details of the absorption measurements and corrections to the diffraction data.

getExptlCrystal() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify information about crystals used in the diffraction measurements.

getExptlCrystal() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EXPTL_CRYSTAL category record the results of experimental measurements on the crystal or crystals used, such as shape, size or density.

getExptlCrystalAppearance() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of ENUMERATION items used to specify information about the crystal colour and appearance.

getExptlCrystalFace() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the dimensions of the crystal used in the diffraction measurements.

getExptlCrystalFace() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EXPTL_CRYSTAL_FACE category record details of the crystal faces.

getExptlCrystalGrow() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EXPTL_CRYSTAL_GROW category record details about the conditions and methods used to grow the crystal.

getExptlCrystalGrowComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the EXPTL_CRYSTAL_GROW_COMP category record details about the components of the solutions that were 'mixed' (by whatever means) to produce the crystal.

getExptlDipolarCouplingTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for dipolar coupling constraint term employed in the target function used for simulated annealing.

getExptlDipolarCouplingTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the dipolar coupling constraints term.

getExptlDIsotopeShiftTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for Deuterium isotope shift constraints term employed in the target function used for simulated annealing.

getExptlDIsotopeShiftTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the Deuterium isotope shift constraints term.

getExptlDistanceTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for distance (NOEs) constraints term employed in the target function used for simulated annealing.

getExptlDistanceTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the distance constraints term.

getExptlJCouplingTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for J coupling term employed in the target function used for simulated annealing.

getExptlJCouplingTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the J coupling term.

getExptlPrep() - Method in class org.rcsb.cif.schema.core.Publ

The experimental preparation section of the submitted paper.

getExptlPrep() - Method in class org.rcsb.cif.schema.core.PublSection

The experimental preparation section of the submitted paper.

getExptlRefinement() - Method in class org.rcsb.cif.schema.core.Publ

The experimental refinement section of the submitted paper.

getExptlRefinement() - Method in class org.rcsb.cif.schema.core.PublSection

The experimental refinement section of the submitted paper.

getExptlSolution() - Method in class org.rcsb.cif.schema.core.Publ

The experimental solution section of the submitted paper.

getExptlSolution() - Method in class org.rcsb.cif.schema.core.PublSection

The experimental solution section of the submitted paper.

getExptlTorsionAnglesTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The final force constant for the torsion angle term employed in the target function used for simulated annealing.

getExptlTorsionAnglesTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the torsion angle constraints term.

getExtensionDictLocation() - Method in class org.rcsb.cif.schema.mm.PdbxAuditConformExtension

A file name or uniform resource locator (URL) for the file containing the extension dictionary.

getExtensionDictName() - Method in class org.rcsb.cif.schema.mm.PdbxAuditConformExtension

An identifier for the extension dictionary to which the current data block conforms.

getExtensionDictVersion() - Method in class org.rcsb.cif.schema.mm.PdbxAuditConformExtension

The version number of the extension dictionary to which the currrent data block conforms.

getExternalRefAxis() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The axis of the external chemical shift reference sample relative to the static field (Bo) of the spectrometer.

getExternalRefLoc() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

External chemical shift references are defined as either located within the sample (e.g., as a capillary) or external to the sample and are inserted into the spectrometer before, after, or both before and after the sample containing the molecular system studied in the entry.

getExternalRefSampleGeometry() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The geometrical shape of the external reference sample.

getExtinctionCoef() - Method in class org.rcsb.cif.schema.core.Refine

The extinction coefficient used to calculate the correction factor applied to the structure-factor data.

getExtinctionCoef() - Method in class org.rcsb.cif.schema.core.RefineLs

The extinction coefficient used to calculate the correction factor applied to the structure-factor data.

getExtinctionCoefSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the extinction coefficient

getExtinctionCoefSu() - Method in class org.rcsb.cif.schema.core.RefineLs

Standard Uncertainty of the extinction coefficient

getExtinctionExpression() - Method in class org.rcsb.cif.schema.core.Refine

Description of or reference to the extinction-correction equation used to apply the data item _refine_ls.extinction_coef.

getExtinctionExpression() - Method in class org.rcsb.cif.schema.core.RefineLs

Description of or reference to the extinction-correction equation used to apply the data item _refine_ls.extinction_coef.

getExtinctionMethod() - Method in class org.rcsb.cif.schema.core.Refine

Description of the extinction correction method applied with the data item _refine_ls.extinction_coef.

getExtinctionMethod() - Method in class org.rcsb.cif.schema.core.RefineLs

Description of the extinction correction method applied with the data item _refine_ls.extinction_coef.

getExtraDefn() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

Yes/No flags whether the corresponding data item marked for inclusion in a journal request list is a standard CIF definition or not.

getExtraDefn() - Method in class org.rcsb.cif.schema.mm.PublManuscriptIncl

Flags whether the corresponding data item marked for inclusion in a journal request list is a standard CIF definition or not.

getExtraInfo() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

A short note indicating the reason why the author wishes the corresponding data item marked for inclusion in the journal request list to be published.

getExtraInfo() - Method in class org.rcsb.cif.schema.mm.PublManuscriptIncl

A short note indicating the reason why the author wishes the corresponding data item marked for inclusion in the journal request list to be published.

getExtraItem() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

The data name (i.e.

getExtraItem() - Method in class org.rcsb.cif.schema.mm.PublManuscriptIncl

Specifies the inclusion of specific data into a manuscript which are not normally requested by the journal.

getF000() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Number of electrons in the crystal unit cell contributing to F(000).

getF000() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The effective number of electrons in the crystal unit cell contributing to F(000).

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyGroupIndex

This data item is a reference to the BIRD identifier for families.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

This data item is a pointer to _pdbx_reference_molecule_family.family_prd_id in the pdbx_reference_molecule category.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

The value of _pdbx_reference_molecule_annotation.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

The value of _pdbx_reference_molecule_details.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id' in category PDBX_REFERENCE_MOLECULE_FAMILY.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

The value of _pdbx_reference_entity.family_prd_id must uniquely identify a record in the PDBX_REFERENCE_MOLECULE_FAMILY list.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The value of _pdbx_reference_molecule_features.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeList

The value of _pdbx_reference_molecule_list.family_prd_id is a reference to _pdbx_reference_molecule_family.family_prd_id' in category PDBX_REFERENCE_MOLECULE_FAMILY.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The value of _pdbx_reference_molecule_related_structures.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.

getFamilyPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

The value of _pdbx_reference_molecule_synonyms.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.

getFax() - Method in class org.rcsb.cif.schema.core.AuditContactAuthor

Facsimile telephone number of the author submitting the manuscript and data block.

getFax() - Method in class org.rcsb.cif.schema.core.Journal

The fax number of the coeditor.

getFax() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The fax number of the coeditor.

getFax() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Fax number of the technical editor for this publication.

getFax() - Method in class org.rcsb.cif.schema.core.Publ

Facsimile telephone number of the author submitting the manuscript and data block.

getFax() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

Facsimile telephone number of the author submitting the manuscript and data block.

getFax() - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

The facsimile telephone number of the author of the data block to whom correspondence should be addressed.

getFax() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The facsimile telephone number of the author of the data block to whom correspondence should be addressed.

getFCalc() - Method in class org.rcsb.cif.schema.core.Refln

The structure factor amplitude for the reflection calculated from the atom site data.

getFCalc() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The calculated value of the structure factor for this derivative, in electrons.

getFCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the structure factor in electrons.

getFCalcAu() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The calculated value of the structure factor for this derivative, in arbitrary units.

getFCalcAu() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the structure factor in arbitrary units.

getFCalcDetails() - Method in class org.rcsb.cif.schema.core.RefineLs

Details concerning the evaluation of the structure factors using the expression given in _refine_ls.F_calc_formula.

getFCalcFormula() - Method in class org.rcsb.cif.schema.core.RefineLs

Analytical expression used to calculate the structure factors.

getFCalcPrecision() - Method in class org.rcsb.cif.schema.core.RefineLs

Estimate of the precision resulting from the numerical approximations made during the evaluation of the structure factors using the expression _refine_ls.F_calc_formula following the method outlined in _refine_ls.F_calc_details.

getFComplex() - Method in class org.rcsb.cif.schema.core.Refln

The structure factor vector for the reflection calculated from the atom site data.

getFDoublePrime() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

The f'' component of the anomalous scattering factor for this wavelength.

getFeature() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The parameter/feature used in the post modeling analysis.

getFeature() - Method in class org.rcsb.cif.schema.mm.NdbStructConfNa

This data item identifies a secondary structure feature of this entry.

getFeature() - Method in class org.rcsb.cif.schema.mm.NdbStructFeatureNa

This data item identifies a structural feature of this entry.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaNonstandard

This data item describes the nonstandard feature of the nucleic acid polymer entity.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

The value of _pdbx_feature_assembly.feature_name.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

The value of _pdbx_feature_domain.feature_name.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

The value of _pdbx_feature_entry.feature_name.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

The value of _pdbx_feature_monomer.feature_name.

getFeature() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

The value of _pdbx_feature_sequence_range.feature_name.

getFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly.feature_assigned_by identifies the individual, organization or program that assigned the feature.

getFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_assigned_by identifies the individual, organization or program that assigned the feature.

getFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_assigned_by identifies the individual, organization or program that assigned the feature.

getFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_assigned_by identifies the individual, organization or program that assigned the feature.

getFeatureAssignedBy() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_assigned_by identifies the individual, organization or program that assigned the feature.

getFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly.feature_citation_id is a reference to a citation in the CITATION category

getFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_citation_id is a reference to a citation in the CITATION category.

getFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_citation_id is a reference to a citation in the CITATION category

getFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_citation_id is a reference to a citation in the CITATION category.

getFeatureCitationId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_citation_id is a reference to a citation in the CITATION category

getFeatureCount() - Method in class org.rcsb.cif.schema.mm.NdbStructConfNa

This data item counts the number of occurences of this feature in this entry.

getFeatureCount() - Method in class org.rcsb.cif.schema.mm.NdbStructFeatureNa

This data item counts the number of occurences of this feature in this entry.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmFeatureList

A unique identifier for the feature.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

Identifier to the molecular feature involved in the distance restraint.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

Identifier for the peptide / residue feature.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

Identifier for the interface residue feature that defines the interface residue.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

An identifier for the selected non-polymer feature.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

An identifier for the selected atom feature.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

An identifier for the selected residue / residue range feature.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSiteFeature

The feature identifier corresponding to this pseudo site.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

Uniquely identfies a sequence feature in the STRUCT_REF_SEQ_FEATURE category.

getFeatureId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

This data item is a pointer to _pdbx_struct_ref_seq_feature.feature_id in the STRUCT_REF_SEQ_FEATURE category.

getFeatureId1() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The feature identifier for the first partner in the angle restraint.

getFeatureId1() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The feature identifier for the first partner in the dihedral restraint.

getFeatureId1() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The feature identifier for the first partner in the distance restraint.

getFeatureId2() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The feature identifier for the second partner in the angle restraint.

getFeatureId2() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The feature identifier for the second partner in the dihedral restraint.

getFeatureId2() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The feature identifier for the second partner in the distance restraint.

getFeatureId3() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The feature identifier for the third partner in the angle restraint.

getFeatureId3() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The feature identifier for the third partner in the dihedral restraint.

getFeatureId4() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The feature identifier for the fourth partner in the dihedral restraint.

getFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly_range.feature_identifier is an additional identifier used to identify or accession this feature.

getFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_identifier is an additional identifier used to identify or accession this feature.

getFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_identifier is an additional identifier used to identify or accession this feature.

getFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_identifier is an additional identifier used to identify or accession this feature.

getFeatureIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_identifier is an additional identifier used to identify or accession this feature.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The name of the parameter/feature used in the post modeling analysis.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelFeature

The component model feature type.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly.feature_name identifies a feature by name.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_name identifies a feature by name.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_name identifies a feature by name.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_name identifies a feature by name.

getFeatureName() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_name identifies a feature by name.

getFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly.feature_software_id is a reference to an application described in the SOFTWARE category.

getFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_software_id is a reference to an application described in the SOFTWARE category.

getFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_software_id is a reference to an application described in the SOFTWARE category.

getFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_software_id is a reference to an application described in the SOFTWARE category.

getFeatureSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_software_id is a reference to an application descripted in the SOFTWARE category.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.IhmFeatureList

The type of feature.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomFeature

The feature assigned to this atom.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

A feature type associated with entity instance.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

_pdbx_feature_assembly.feature_type identifies the type of feature.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

_pdbx_feature_domain.feature_type identifies the type of feature.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

_pdbx_feature_entry.feature_type identifies the type of feature.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

_pdbx_feature_monomer.feature_type identifies the type of feature.

getFeatureType() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

_pdbx_feature_sequence_range.feature_type identifies the type of feature.

getFeatureValue() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelFeature

The component feature value.

getFetchUrl() - Method in class org.rcsb.cif.CifOptions

The URL from which files should be fetched - must follow the pattern: www.source.com/%s.cif, where %s represents the pdbId to be inserted into the URL to fetch the correct file.

getFiducialMarkers() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

'YES' indicates that fiducial markers were used in the specimen preparation

getFieldStrength() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

Select the field strength for protons in MHz.

getFigureCaptions() - Method in class org.rcsb.cif.schema.core.Publ

The figure captions of the submitted paper.

getFigureCaptions() - Method in class org.rcsb.cif.schema.core.PublSection

The figure captions of the submitted paper.

getFile() - Method in class org.rcsb.cif.schema.mm.EmFscCurve

FSC file name.

getFile() - Method in class org.rcsb.cif.schema.mm.EmInterpretFigure

The name of the image file associated with the map entry

getFile() - Method in class org.rcsb.cif.schema.mm.EmLayerLines

The name of the layer line file associated with the map entry

getFile() - Method in class org.rcsb.cif.schema.mm.EmMap

Map file name.

getFile() - Method in class org.rcsb.cif.schema.mm.EmStructureFactors

The name of the structure factor file associated with the map entry

getFileContentType() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

The content type of the uploaded file.

getFileFormat() - Method in class org.rcsb.cif.CifOptions

Reports if the input file format was specified for reading.

getFileFormat() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

Format of the external file.

getFileId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetExternalReference

The file id corresponding to this external data file.

getFileId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

A reference to the external file containing the structural models in the sub sample.

getFileId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

The file id for the externally stored localization density file.

getFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

The name of the uploaded file.

getFileName() - Method in class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

Auxilary file name.

getFilePath() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

The relative path (including filename) for each external file.

getFileSize() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

The size of the uploaded file in bytes.

getFileSizeBytes() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

Storage size of the external file in bytes.

getFileType() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

The internal file type of the uploaded file.

getFileType() - Method in class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

Auxilary file type.

getFilmMaterial() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

The support material covering the em grid.

getFilmOrDetectorModel() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The detector type used for recording images.

getFilterEdge() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Absorption edge of the radiation filter used.

getFilterEdge() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Absorption edge in angstroms of the radiation filter used.

getFilterSize() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

The size of filter in micrometres in filtering crystals

getFinalSolutionDetails() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

Details of the final solution used in the treatment of this crystal

getFinalThickness() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Final sample thickness

getFinalThickness() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

Final thickness of the sectioned sample, in nanometers

getFirstBlock() - Method in class org.rcsb.cif.schema.DelegatingCifFile

Convenience function to give access to all data in this file.

getFittingAtomType() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

The type of atoms in the model fit to the SAS data.

getFittingId() - Method in class org.rcsb.cif.schema.mm.EmSoftware

pointer to _em_3d_fitting.id in the EM_3D_FITTING category.

getFittingMethod() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

Method used to fit the model to the 3DEM map.

getFittingMethod() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

The method used for fitting the model to the EPR data.

getFittingMethod() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

The method used for fitting the model to the SAS data.

getFittingMethodCitationId() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

The citation id of the citation for the fitting method used.

getFittingMethodCitationId() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

Identifier pointing to the citation for the fitting method.

getFittingParticleType() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

The type of particle fit to the EPR data.

getFittingSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

Identifier pointing to the software used for fitting.

getFittingState() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

An indicator to single or multiple state fitting.

getFittingState() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

An indicator to single or multiple state fitting.

getFlag() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

Residue with density problem will be flagged as P.

getFlagId() - Method in class org.rcsb.cif.schema.mm.PdbxSummaryFlags

A feature flag name.

getFlagValue() - Method in class org.rcsb.cif.schema.mm.PdbxSummaryFlags

A feature flag value

getFlowRate() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The rate at which the equilibration buffer flowed through the column.

getFlowRate() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the flow rate of solution being injected measured in ul/min.

getFMeas() - Method in class org.rcsb.cif.schema.core.Refln

The structure factor amplitude for the reflection derived from the measured intensities.

getFMeas() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The measured value of the structure factor for this derivative, in electrons.

getFMeas() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

The measured value of the structure factor for this reflection in this data set in electrons.

getFMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of the structure factor in electrons.

getFMeasAu() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The measured value of the structure factor for this derivative, in arbitrary units.

getFMeasAu() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

The measured value of the structure factor for this reflection in this data set in arbitrary units.

getFMeasAu() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of the structure factor in arbitrary units.

getFMeasSigma() - Method in class org.rcsb.cif.schema.core.Refln

The standard uncertainty of the measured structure factor amplitude.

getFMeasSigma() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_refln.F_meas, in electrons.

getFMeasSigma() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

The standard uncertainty (estimated standard deviation) of _phasing_set_refln.F_meas in electrons.

getFMeasSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (estimated standard deviation) of _refln.F_meas in electrons.

getFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_refln.F_meas_au, in arbitrary units.

getFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

The standard uncertainty (estimated standard deviation) of _phasing_set_refln.F_meas_au in arbitrary units.

getFMeasSigmaAu() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (estimated standard deviation) of _refln.F_meas_au in arbitrary units.

getFMeasSu() - Method in class org.rcsb.cif.schema.core.Refln

The standard uncertainty of the measured structure factor amplitude.

getFocalSpotSize() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The focal spot size of the beam impinging on the sample (micrometres squared).

getFom() - Method in class org.rcsb.cif.schema.core.Refln

The figure of merit m for this reflection.

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The mean figure of merit after refinement.

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.fom identifies the figure of merit for all the data

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.fom identifies the figure of merit for all the data with resolution shells.

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.fom records the figure of merit for MAD phasing.

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.fom records the figure of merit for MAD phasing.

getFom() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.fom records the figure of merit for MAD phasing.

getFom() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The mean value of the figure of merit m for reflections for this derivative in this shell.

getFom() - Method in class org.rcsb.cif.schema.mm.Refln

The figure of merit m for this reflection.

getFOM() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The mean value of the figure of merit m for all reflections phased in the native data set.

getFOM() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean value of the figure of merit m for reflections in this shell.

getFomAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.fom_acentric identifies the figure of merit for acentric data

getFomAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.fom_acentric identifies the figure of merit for acentric data with resolution shells

getFomAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.fom_acentric records the figure of merit using acentric data for MAD phasing.

getFomAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.fom_acentric records the figure of merit using acentric data for MAD phasing.

getFomAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.fom_acentric records the figure of merit using acentric data for MAD phasing.

getFOMAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The mean value of the figure of merit m for the acentric reflections phased in the native data set.

getFOMAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean value of the figure of merit m for acentric reflections in this shell.

getFomCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.fom_centric identifies the figure of merit for acentric data

getFomCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.fom_centric identifies the figure of merit for centric data with resolution shells.

getFomCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.fom_centric records the figure of merit using centric data for MAD phasing.

getFomCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.fom_centric records the figure of merit using centric data for MAD phasing.

getFomCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.fom_centric records the figure of merit using centric data for MAD phasing.

getFOMCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The mean value of the figure of merit m for the centric reflections phased in the native data set.

getFOMCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean value of the figure of merit m for centric reflections in this shell.

getFootnote() - Method in class org.rcsb.cif.schema.core.PublAuthor

A footnote accompanying an author's name in the list of authors of a paper.

getFootnote() - Method in class org.rcsb.cif.schema.mm.PublAuthor

A footnote accompanying an author's name in the list of authors of a paper.

getFootnoteId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The value of _atom_site.footnote_id must match an ID specified by _atom_sites_footnote.id in the ATOM_SITES_FOOTNOTE list.

getFormalCharge() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The formal charge corresponding to this coordinate position.

getFormalCharge() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Formal charge if nonzero

getFormat() - Method in class org.rcsb.cif.schema.core.PublBody

Enumerated state indicating the appropriate typesetting conventions for accented characters and special symbols in the text section.

getFormat() - Method in class org.rcsb.cif.schema.mm.EmMap

map format

getFormat() - Method in class org.rcsb.cif.schema.mm.PublBody

Code indicating the appropriate typesetting conventions for accented characters and special symbols in the text section.

getFormFactorTable() - Method in class org.rcsb.cif.schema.core.Refln

Atomic scattering factor table for the scattering angle of this diffraction vector and atom types in structure.

getFormul() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Place-holder for PDB record FORMUL

getFormula() - Method in class org.rcsb.cif.schema.mm.ChemComp

The formula for the chemical component.

getFormula() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

formula for buffer component

getFormula() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

The formula for the chemical component.

getFormula() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

The observed formula for the chemical component in the deposited coordinates.

getFormula() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

The formula for the reference entity.

getFormula() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The formula for the reference entity.

getFormulaUnitsZ() - Method in class org.rcsb.cif.schema.core.Cell

The number of the formula units in the unit cell as specified by _chemical_formula.structural, _chemical_formula.moiety or _chemical_formula.sum.

getFormulaUnitsZ() - Method in class org.rcsb.cif.schema.mm.Cell

The number of the formula units in the unit cell as specified by _chemical_formula.structural, _chemical_formula.moiety or _chemical_formula.sum.

getFormulaWeight() - Method in class org.rcsb.cif.schema.mm.ChemComp

Formula mass in daltons of the chemical component.

getFormulaWeight() - Method in class org.rcsb.cif.schema.mm.Entity

Formula mass in daltons of the entity.

getFormulaWeight() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Formula mass in daltons of the entity.

getForwardPrimerId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getFourierSpaceCoverage() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Completeness of the structure factor data within this resolution shell, in percent

getFourierSpaceCoverage() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Completeness of the structure factor data within the defined space group at the reported resolution (percent).

getFpRate() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The footprinting rate.

getFpRateError() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The footprinting rate error.

getFPrime() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

The f' component of the anomalous scattering factor for this wavelength.

getFraction() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The twin fraction or twin factor represents a quantitative parameter for the crystal twinning.

getFractNAStrandPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

Size of drug molecules per asymmetric unit.

getFractTransfMatrix11() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix12() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix13() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix21() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix22() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix23() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix31() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix32() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfMatrix33() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the 3x3 matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransformAxes() - Method in class org.rcsb.cif.schema.core.AtomSites

Description of the relative alignment of the crystal cell axes to the Cartesian orthogonal axes as applied in the transformation matrix _atom_sites_fract_transform.matrix.

getFractTransfVector1() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfVector1() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfVector2() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfVector2() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractTransfVector3() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getFractTransfVector3() - Method in class org.rcsb.cif.schema.mm.AtomSites

The elements of the three-element vector used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates in the same category.

getFractX() - Method in class org.rcsb.cif.schema.core.AtomSite

Atom site coordinates as fractions of the cell length values.

getFractX() - Method in class org.rcsb.cif.schema.mm.AtomSite

The x coordinate of the atom-site position specified as a fraction of _cell.length_a.

getFractX() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_x records the X fractional coordinate of site obtained from MAD phasing.

getFractX() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The x coordinate of this heavy-atom position in this derivative specified as a fraction of _cell.length_a.

getFractXEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFractXEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.fract_x.

getFractXEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_x_esd records the estimated standard deviation X fractional coordinate of site obtained from MAD phasing.

getFractXEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.fract_x.

getFractXSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFractXyz() - Method in class org.rcsb.cif.schema.core.AtomSite

Vector of atom site coordinates projected onto the crystal unit cell as fractions of the cell lengths.

getFractXyz() - Method in class org.rcsb.cif.schema.core.ModelSite

Vector of fractional atom site coordinates.

getFractY() - Method in class org.rcsb.cif.schema.core.AtomSite

Atom site coordinates as fractions of the cell length values.

getFractY() - Method in class org.rcsb.cif.schema.mm.AtomSite

The y coordinate of the atom-site position specified as a fraction of _cell.length_b.

getFractY() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_y records the Y fractional coordinate of site obtained from MAD phasing.

getFractY() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The y coordinate of this heavy-atom position in this derivative specified as a fraction of _cell.length_b.

getFractYEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFractYEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.fract_y.

getFractYEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_y_esd records the estimated standard deviation Y fractional coordinate of site obtained from MAD phasing.

getFractYEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.fract_y.

getFractYSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFractZ() - Method in class org.rcsb.cif.schema.core.AtomSite

Atom site coordinates as fractions of the cell length values.

getFractZ() - Method in class org.rcsb.cif.schema.mm.AtomSite

The z coordinate of the atom-site position specified as a fraction of _cell.length_c.

getFractZ() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_z records the Z fractional coordinate of site obtained from MAD phasing.

getFractZ() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The z coordinate of this heavy-atom position in this derivative specified as a fraction of _cell.length_c.

getFractZEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFractZEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.fract_z.

getFractZEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.fract_z_esd records the estimated standard deviation Z fractional coordinate of site obtained from MAD phasing.

getFractZEsd() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.fract_z.

getFractZSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty value of the atom site coordinates as fractions of the cell length values.

getFrameHits() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of data frames collected in which the sample was hit.

getFramesFailedIndex() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of data frames collected that contained a "hit" but failed to index.

getFramesIndexed() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of data frames collected that were indexed.

getFramesPerImage() - Method in class org.rcsb.cif.schema.mm.EmImageScans

Total number of time-slice (movie) frames taken per image.

getFramesTotal() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

The total number of data frames collected for this data set.

getFreeRErrorNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value error(no cutoff)

getFreeRFactor4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

R free value (4 sigma cutoff).

getFreeRFactorNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeRVal4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeRValNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value (no cutoff)

getFreeRValTestSetCt4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value test set count (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeRValTestSetCtNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value test set count (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeRValTestSetSizePerc4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value test set size (in percent, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeRValTestSetSizePercNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Free R-value test set size (in percent, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getFreeSetCount() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of unique reflections for calculating Rfree (testing set) reported in the model file.

getFriedelCoverage() - Method in class org.rcsb.cif.schema.core.Reflns

The proportion of Friedel related reflections present in the number of the 'independent reflections' specified by the item _reflns.number_total.

getFriedelCoverage() - Method in class org.rcsb.cif.schema.mm.Reflns

The proportion of Friedel-related reflections present in the number of 'independent' reflections specified by the item _reflns.number_all.

getFriedelFractionFull() - Method in class org.rcsb.cif.schema.core.Reflns

The ratio of Friedel pairs measured to _diffrn_reflns.theta_full to the number theoretically possible (ignoring reflections in centric projections and systematic absences throughout).

getFriedelFractionMax() - Method in class org.rcsb.cif.schema.core.Reflns

The ratio of Friedel pairs measured to _diffrn_reflns.theta_max to the number theoretically possible (ignoring reflections in centric projections and systematic absences throughout).

getFromAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The atom identifier/name in the second of the two constituents containing the linkage.

getFromAtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The chiral configuration of the second atom making the linkage.

getFromCoeditor() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication recieved from coeditor.

getFromCoeditor() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication recieved from coeditor.

getFromCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The component identifier in the second of the two constituents containing the linkage.

getFromLeavingAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The leaving atom identifier/name bonded to the second atom making the linkage.

getFromListId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The value of _pdbx_reference_linked_entity_link.from_list_id is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.

getFscType() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

type of FSC curve used to determine map resolution

getFSquaredCalc() - Method in class org.rcsb.cif.schema.core.Refln

The structure factor amplitude squared for the reflection calculated from the atom site data.

getFSquaredCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the squared structure factor in electrons squared.

getFSquaredMeas() - Method in class org.rcsb.cif.schema.core.Refln

The structure factor amplitude for the reflection derived from the measured intensities.

getFSquaredMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of the squared structure factor in electrons squared.

getFSquaredMeasSu() - Method in class org.rcsb.cif.schema.core.Refln

The standard uncertainty of the measured structure factor squared.

getFSquaredSigma() - Method in class org.rcsb.cif.schema.core.Refln

The standard uncertainty of the measured structure factor squared.

getFSquaredSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the squared structure factor in electrons squared.

getFullMatrices() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

Transformation matrix as provided by depositor

getFullNameOfCenter() - Method in class org.rcsb.cif.schema.mm.PdbxSGProject

The value identifies the full name of center.

getFunction() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The crystallographic functions the invoked in the definition methods of CORE STRUCTURE data items defined and used with in the Crystallographic Information Framework (CIF).

getFunction() - Method in class org.rcsb.cif.schema.mm.PdbxStructBiolFunc

The function assigned to the biological assembly.

getFundingOrganization() - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

The name of the organization providing funding support for the entry.

getGamma() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell angle gamma.

getGamma() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle gamma (O5'-C5'-C4'-C3').

getGammaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the angle between the bounding cell axes.

getGammaSu() - Method in class org.rcsb.cif.schema.core.CellAngle

Standard uncertainty of the angle between the bounding cell axes.

getGammaTolerance() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Tolerance in unit cell angle gamma.

getGeneInsertMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The method used to insert the gene into the vector.

getGeneral() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Appearance of the crystal as prescribed state codes.

getGeneral() - Method in class org.rcsb.cif.schema.core.ExptlCrystalAppearance

Appearance of the crystal as prescribed state codes.

getGeneSrcCommonName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The common name of the natural organism from which the gene was obtained.

getGeneSrcDetails() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A description of special aspects of the natural organism from which the gene was obtained.

getGeneSrcDevStage() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A string to indicate the life-cycle or cell development cycle in which the gene is expressed and the mature protein is active.

getGeneSrcGene() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

Identifies the gene.

getGeneSrcGenus() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The genus of the natural organism from which the gene was obtained.

getGeneSrcNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

NCBI Taxonomy identifier for the gene source organism.

getGeneSrcScientificName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

Scientific name of the organism.

getGeneSrcSpecies() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The species of the natural organism from which the gene was obtained.

getGeneSrcStrain() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The strain of the natural organism from which the gene was obtained, if relevant.

getGeneSrcTissue() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The tissue of the natural organism from which the gene was obtained.

getGeneSrcTissueFraction() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The subcellular fraction of the tissue of the natural organism from which the gene was obtained.

getGenus() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The genus of the organism from which the entity was isolated.

getGeom() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the geometry of the structural model as derived from the atomic sites.

getGeom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM and related (GEOM_ANGLE, GEOM_BOND, GEOM_CONTACT, GEOM_HBOND and GEOM_TORSION) categories record details about the molecular geometry as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGeomAngle() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the geometry angles in the structural model as derived from the atomic sites.

getGeomAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM_ANGLE category record details about the bond angles as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGeomBond() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the geometry bonds in the structural model as derived from the atomic sites.

getGeomBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM_BOND category record details about the bond lengths as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGeomContact() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the interatomic contact distances in the structural model.

getGeomContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM_CONTACT category record details about interatomic contacts as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGeomHbond() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the hydrogen bond distances in the structural model as derived from atomic sites.

getGeomHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM_HBOND category record details about hydrogen bonds as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGeomTorsion() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify the torsion angles in the structural model as derived from the atomic sites.

getGeomTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the GEOM_TORSION category record details about torsion angles as calculated from the contents of the ATOM, CELL and SYMMETRY data.

getGoId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The Gene Ontology (GO) identifier for the component.

getGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.RefineLs

Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getGoodnessOfFitAllSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getGoodnessOfFitAllSu() - Method in class org.rcsb.cif.schema.core.RefineLs

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for significantly intense reflections, (i.e.

getGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.RefineLs

Least-squares goodness-of-fit parameter S for significantly intense reflections, (i.e.

getGoodnessOfFitGtSu() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for gt reflections after the final cycle of refinement.

getGoodnessOfFitGtSu() - Method in class org.rcsb.cif.schema.core.RefineLs

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for gt reflections after the final cycle of refinement.

getGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for those reflections included in the final cycle of refinement.

getGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.RefineLs

Least-squares goodness-of-fit parameter S for those reflections included in the final cycle of refinement.

getGrantNumber() - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

The grant number associated with this source of support.

getGreen() - Method in class org.rcsb.cif.schema.core.DisplayColour

Integer value between 0 and 255 giving the intensity of a specific colour component (red, green or blue) for the RGB display colour code.

getGridMaterial() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

The name of the material from which the grid is made.

getGridMeshSize() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

The value of the mesh size (divisions per inch) of the em grid.

getGridType() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

A description of the grid type.

getGroup() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

The collection of categories updated with this revision.

getGroupCode() - Method in class org.rcsb.cif.schema.core.ReflnsScale

Code identifying a reflection scale group.

getGroupCode() - Method in class org.rcsb.cif.schema.mm.ReflnsScale

The code identifying a scale _reflns_scale.meas_F, _reflns_scale.meas_F_squared or _reflns_scale.meas_intensity.

getGroupConditionality() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

If a group of angles are restrained together, this data item defines the conditionality based on which the restraint is applied in the modeling.

getGroupConditionality() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

If a group of dihedrals are restrained together, this data item defines the conditionality based on which the restraint is applied in the modeling.

getGroupConditionality() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

If a group of atoms or residues are restrained, this data item defines the conditionality based on which the restraint is applied in the modeling.

getGroupConditionality() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

If a group of atoms or residues are restrained, this data item defines the conditionality based on which the restraint is applied in the modeling.

getGroupDescription() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroup

A description of the contents of entries in the collection.

getGroupEnumerationType() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

The manner in which the group is defined.

getGroupFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A file name of the group of collected structures.

getGroupFileTimestamp() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A file timestamp of the group of collected structures.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

An identifier for a set of ambiguous crosslink restraints.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

An identifier for a set of ambiguous cross-links.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroupLink

An identifier for the dataset group.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

An identifier to group the angle restraints.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

An identifier to group the dihedral restraints.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

An identifier to group the distance restraints.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

An identifier to group the hydroxyl radical footprinting restraints.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmModelGroupLink

An identifier for the structural model group.

getGroupId() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

An identifier to group the predicted contacts.

getGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroup

A unique identifier for a group of entries deposited as a collection.

getGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A unique identifier for a group of entries deposited as a collection.

getGroupName() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table group name..

getGroupPDB() - Method in class org.rcsb.cif.schema.mm.AtomSite

The group of atoms to which the atom site belongs.

getGroupPDB() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The group of atoms to which the atom site in the starting model belongs.

getGroupPDB() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

The PDB group of atoms to which the atom site belongs.

getGroupTitle() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroup

A title to describe the group of entries deposited in the collection.

getGroupType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroup

Text to describe a grouping of entries in multiple collections

getH_MNotation() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetry

The Hermann-Mauguin notation for this point symmetry group.

getH_MNotation() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

The Hermann-Mauguin notation for this point symmetry group.

getHaAmpl() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The mean heavy-atom amplitude for reflections for this derivative in this shell.

getHand() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

Handedness of the helix: right handed or left handed

getHardware() - Method in class org.rcsb.cif.schema.mm.Software

The hardware upon which the software was run.

getHarmonicForceConstant() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The harmonic force constant, if applicable.

getHarvestingDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Details of the harvesting protocol.

getHasAcceptedTermsAndConditions() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate the acceptance of wwPDB deposition and annotation terms and conditions.

getHasCyclicSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that this entry has cyclic symmetry

getHasHelicalSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that this entry has helical symmetry

getHasLigandOfInterest() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

A flag to indicate if author has indicated that there are any or no ligands that are the focus of research.

getHasMutation() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

A flag to indicate that the entity has a mutation.

getHasNcsData() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that the deposition includes NCS data.

getHasPointSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that this entry has point symmetry

getHasSasData() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate whether the author has related SAXS/SANS data.

getHasViewedValidationReport() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate the viewing the latest validation report.

getHbondType12() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Base pair classification of Westhoff and Leontis.

getHbondType28() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Base pair classification of Saenger

getHeaderReleaseDate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date of header information release for this entry

getHelicalRise() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step helical rise parameter.

getHelicalRise() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

The axial rise per subunit in the helical assembly.

getHelicalRotation() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

Angular rotation (degrees) along the helical axis

getHelicalTwist() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step helical twist parameter.

getHetero() - Method in class org.rcsb.cif.schema.mm.EntityPolySeq

A flag to indicate whether this monomer in the polymer is heterogeneous in sequence.

getHetero() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

A flag to indicate whether this monomer in the entity is heterogeneous in sequence.

getHetero() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchList

A flag to indicate whether this monomer in the entity is heterogeneous in sequence.

getHetero() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Pointer to _entity_poly_seq.hetero

getHetero() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

A flag to indicate that sequence heterogeneity at this monomer position.

getHetgroupChemicalName() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Place-holder for PDB record HETNAM

getHetgroupName() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Place-holder for PDB record HET

getHiAngFoxC0() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Fox et al.

getHiAngFoxC1() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Fox et al.

getHiAngFoxC2() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Fox et al.

getHiAngFoxC3() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of data items used to define Fox et al.

getHiAngFoxCoeffs() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The set of Fox et al.

getHighPressureFreezing() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

'YES' indicates that high pressure freezing was used in the specimen preparation

getHighResolution() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

High resolution limit for this shell (Angstroms)

getHighResolution() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

High resolution limit of the structure factor data, in Angstroms

getHkl() - Method in class org.rcsb.cif.schema.core.CellMeasurementRefln

Miller indices of a reflection used to measure the unit cell.

getHkl() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

Miller indices of a reflection used to define the orientation matrix.

getHkl() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Miller indices of a measured reflection.

getHkl() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

Miller indices of a standard reflection.

getHkl() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Miller indices of the crystal face.

getHkl() - Method in class org.rcsb.cif.schema.core.Refln

The Miller indices as a reciprocal space vector.

getHLAIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The isomorphous Hendrickson-Lattman coefficient A~iso~ for this reflection for this derivative.

getHLBIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The isomorphous Hendrickson-Lattman coefficient B~iso~ for this reflection for this derivative.

getHLCIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The isomorphous Hendrickson-Lattman coefficient C~iso~ for this reflection for this derivative.

getHLDIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The isomorphous Hendrickson-Lattman coefficient D~iso~ for this reflection for this derivative.

getHoldForPublication() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

At an author's request, an entry is to be held until publication.

getHostOrgCellLine() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

A specific line of cells used as the expression system

getHostOrgCommonName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The common name of the organism that served as host for the production of the entity.

getHostOrgCommonName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The common name of the organism that served as host for the expression system.

getHostOrgCultureCollection() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Culture collection of the expression system

getHostOrgDetails() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A description of special aspects of the organism that served as host for the production of the entity.

getHostOrgDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

A description of special aspects of the organism that served as host for the expression system.

getHostOrgGene() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

Specific gene which expressed the molecule.

getHostOrgGenus() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The genus of the organism that served as host for the production of the entity.

getHostOrgNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

NCBI Taxonomy identifier for the expression system organism.

getHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The scientific name of the organism that served as host for the production of the entity.

getHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The scientific name of the organism that served as host for the expression system.

getHostOrgSpecies() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The species of the organism that served as host for the production of the entity.

getHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The strain of the organism in which the entity was expressed.

getHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The strain of the organism in which the entity was expressed.

getHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The strain of the organism that served as host for the expression system.

getHostOrgTaxId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The id for the NCBI taxonomy node corresponding to the organism that served as host for the expression system.

getHostOrgTissue() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The specific tissue which expressed the molecule.

getHostOrgVariant() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The vairant of the organism that served as host for the expression system.

getHostOrgVectorType() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

Identifies the type of vector used (plasmid, virus, or cosmid).

getHue() - Method in class org.rcsb.cif.schema.core.DisplayColour

Colour hue as an enumerated code.

getHue() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Colour hue of the crystals as prescribed state codes.

getHue() - Method in class org.rcsb.cif.schema.core.ExptlCrystalAppearance

Colour hue of the crystals as prescribed state codes.

getHumidity() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The humidity (%) in the vicinity of the vitrification process.

getHydrogenAtomsYN() - Method in class org.rcsb.cif.schema.mm.PdbxCoord

Gives information if the coordinates for hydrogen atoms are available.

getHydrogenBondConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of hydrogen bond constraints used in the final structure calculation.

getHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.Refine

Code identifying how hydrogen atoms were treated in the refinement.

getHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.RefineLs

Code identifying how hydrogen atoms were treated in the refinement.

getI() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

The measured value of the intensity in arbitrary units.

getIAuthAsymId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the asym id of the i-th base in the base pair.

getIAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's asym id of the i-th base in the first base pair of the step.

getIAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's asym id of the i-th base in the second base pair of the step.

getIAuthSeqId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the sequence number of the i-th base in the base pair.

getIAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's sequence number of the i-th base in the first base pair of the step.

getIAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's sequence number of the i-th base in the second base pair of the step.

getIceRing() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Boolean whether ice ring exists (Y) or not (N) as determined by Xtriage.

getICSD() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Inorganic Crystal Structure Database.

getICSD() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by the Inorganic Crystal Structure Database.

getIctvdbId() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The International Committee on Taxonomy of Viruses (ICTV) Taxon Identifier is the Virus Code used throughout the ICTV database (ICTVdb).

getId() - Method in class org.rcsb.cif.schema.core.AtomSite

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getId() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

Anisotropic atomic displacement parameters are usually looped in a separate list.

getId() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

Anisotropic atomic displacement parameters are usually looped in a separate list.

getId() - Method in class org.rcsb.cif.schema.core.ChemicalConnBond

Unique identifier for the bond.

getId() - Method in class org.rcsb.cif.schema.core.Citation

Unique identifier to the CITATION list.

getId() - Method in class org.rcsb.cif.schema.core.CitationEditor

Value is a unique key to a set of CITATION_EDITOR items in a looped list.

getId() - Method in class org.rcsb.cif.schema.core.DatabaseRelated

An identifer for this database reference

getId() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Code identifying a radiation used in the diffraction measurements.

getId() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Code identifying a radiation used in the diffraction measurements.

getId() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Code identifying a crystal.

getId() - Method in class org.rcsb.cif.schema.core.GeomAngle

An arbitrary, unique identifier for the angle formed by the three atoms.

getId() - Method in class org.rcsb.cif.schema.core.GeomBond

Unique identifier for the bond.

getId() - Method in class org.rcsb.cif.schema.core.GeomContact

An identifier for the contact that is unique within the loop.

getId() - Method in class org.rcsb.cif.schema.core.GeomHbond

An identifier for the hydrogen bond that is unique within the loop.

getId() - Method in class org.rcsb.cif.schema.core.GeomTorsion

An identifier for the torsion angle that is unique within its loop.

getId() - Method in class org.rcsb.cif.schema.core.JournalIndex

Index number identifier of the JOURNAL_INDEX category.

getId() - Method in class org.rcsb.cif.schema.core.ModelSite

An identifier for the model site that is unique within its loop.

getId() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

Index identifying each entry in the _space_group_symop.operation_xyz list.

getId() - Method in class org.rcsb.cif.schema.core.SpaceGroupWyckoff

An arbitrary code that is unique to a particular Wyckoff position.

getId() - Method in class org.rcsb.cif.schema.core.ValenceParam

Unique index loop number of the valence parameter loop.

getId() - Method in class org.rcsb.cif.schema.core.ValenceRef

Unique loop code of the valence references.

getId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The value of _atom_site.id must uniquely identify a record in the ATOM_SITE list.

getId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

This data item is a pointer to _atom_site.id in the ATOM_SITE category.

getId() - Method in class org.rcsb.cif.schema.mm.AtomSitesAlt

The value of _atom_sites_alt.id must uniquely identify a record in the ATOM_SITES_ALT list.

getId() - Method in class org.rcsb.cif.schema.mm.AtomSitesAltEns

The value of _atom_sites_alt_ens.id must uniquely identify a record in the ATOM_SITES_ALT_ENS list.

getId() - Method in class org.rcsb.cif.schema.mm.AtomSitesFootnote

A code that identifies the footnote.

getId() - Method in class org.rcsb.cif.schema.mm.ChemComp

The value of _chem_comp.id must uniquely identify each item in the CHEM_COMP list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The value of _chem_comp_chir.id must uniquely identify a record in the CHEM_COMP_CHIR list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemCompPlane

The value of _chem_comp_plane.id must uniquely identify a record in the CHEM_COMP_PLANE list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemCompTor

The value of _chem_comp_tor.id must uniquely identify a record in the CHEM_COMP_TOR list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemLink

The value of _chem_link.id must uniquely identify each item in the CHEM_LINK list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The value of _chem_link_chir.id must uniquely identify a record in the CHEM_LINK_CHIR list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlane

The value of _chem_link_plane.id must uniquely identify a record in the CHEM_LINK_PLANE list.

getId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

The value of _chem_link_tor.id must uniquely identify a record in the CHEM_LINK_TOR list.

getId() - Method in class org.rcsb.cif.schema.mm.Citation

The value of _citation.id must uniquely identify a record in the CITATION list.

getId() - Method in class org.rcsb.cif.schema.mm.DatabasePDBCaveat

A unique identifier for the PDB caveat record.

getId() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRemark

A unique identifier for the PDB remark record.

getId() - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

The value of _database_PDB_tvect.id must uniquely identify a record in the DATABASE_PDB_TVECT list.

getId() - Method in class org.rcsb.cif.schema.mm.Diffrn

This data item uniquely identifies a set of diffraction data.

getId() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiationWavelength

The code identifying each value of _diffrn_radiation_wavelength.wavelength.

getId() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The value of _diffrn_refln.id must uniquely identify the reflection in the data set identified by the item _diffrn_refln.diffrn_id.

getId() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Unique key for the 2d_crystal_entity category.

getId() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

unique identifier for each projection selection description

getId() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unique key for the em_3d_crystal_entity category.

getId() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The value of _em_3d_fitting.id must uniquely identify a fitting procedure of atomic coordinates into 3dem reconstructed map volume.

getId() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

This data item is a unique identifier.

getId() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The value of _em_3d_reconstruction.id must uniquely identify the 3d reconstruction.

getId() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The value of _em_assembly.id must uniquely identify a collection of observed complexes.

getId() - Method in class org.rcsb.cif.schema.mm.EmBuffer

The value of _em_buffer.id must uniquely identify the sample buffer.

getId() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmDbReference

The name of the database containing the related entry.

getId() - Method in class org.rcsb.cif.schema.mm.EmDbReferenceAuxiliary

Unique identifier for a provided link.

getId() - Method in class org.rcsb.cif.schema.mm.EmDetector

The value of _em_detector.id must uniquely identify the detector used for imaging.

getId() - Method in class org.rcsb.cif.schema.mm.EmDiffraction

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Unique identifier for the category em_diffraction_shell

getId() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Identifier for this category

getId() - Method in class org.rcsb.cif.schema.mm.EmEmbedding

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The value of _em_entity_assembly.id identifies one component of the complex.

getId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

Ordinal key for the em_entity_assembly_molwt category.

getId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

Ordinal key for the em_entity_assembly_naturalsource category.

getId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

Ordinal identifier

getId() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmExperiment

Placeholder ID.

getId() - Method in class org.rcsb.cif.schema.mm.EmFiducialMarkers

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

This data item is the unique identifier for an image file.

getId() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmFscCurve

This data item provides a unique identifier for each archived FSC curve.

getId() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

The value of _em_helical_entity.id must uniquely identify a set of the filament parameters for this assembly component.

getId() - Method in class org.rcsb.cif.schema.mm.EmHighPressureFreezing

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmImageProcessing

This data item provides a unique identifier for each data processing block.

getId() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The item _em_image_recording.id uniquely identifies a set of recorded images.

getId() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The value of _em_image_scans.id must uniquely identify the images scanned.

getId() - Method in class org.rcsb.cif.schema.mm.EmImaging

The value of _em_imaging.id must uniquely identify each imaging experiment.

getId() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmInterpretFigure

This data item is the unique identifier for the image file.

getId() - Method in class org.rcsb.cif.schema.mm.EmLayerLines

This data item is the unique identifier for the layer line file.

getId() - Method in class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

This data item is the unique identifier for the layer line file.

getId() - Method in class org.rcsb.cif.schema.mm.EmMap

Unique id for the EMD_MAP category.

getId() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

Unique identifier for each map listed.

getId() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

Unique identifier for each map listed.

getId() - Method in class org.rcsb.cif.schema.mm.EmObsolete

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

Ordinal identifier

getId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

The value of _em_sample_preparation.id must uniquely identify the sample preparation.

getId() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

The value of _em_sample_support.id must uniquely identify the sample support.

getId() - Method in class org.rcsb.cif.schema.mm.EmShadowing

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

Unique category label.

getId() - Method in class org.rcsb.cif.schema.mm.EmSoftware

Unique identifier for each software description.

getId() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

The item _em_specimen.id uniquely identifies a specimen along with its preparation methods.

getId() - Method in class org.rcsb.cif.schema.mm.EmStaining

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmStructureFactors

This data item is the unique identifier for the structure factor file.

getId() - Method in class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

This data item is the unique identifier for the structure factor file.

getId() - Method in class org.rcsb.cif.schema.mm.EmSupersede

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmTomography

Primary key

getId() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

This data item is the primary key of the category.

getId() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

Is the unique identifier for VIRUS_ENTITY category.

getId() - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

Unique identifier for the virus natural host.

getId() - Method in class org.rcsb.cif.schema.mm.EmVirusShell

The value of _em_em_virus_shell.id is a unique identifier for one virus shell.

getId() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The value of _em_vitrification.id must uniquely identify the vitrification procedure.

getId() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

Ordinal identifier

getId() - Method in class org.rcsb.cif.schema.mm.Entity

The value of _entity.id must uniquely identify a record in the ENTITY list.

getId() - Method in class org.rcsb.cif.schema.mm.Entry

The value of _entry.id identifies the data block.

getId() - Method in class org.rcsb.cif.schema.mm.EntryLink

The value of _entry_link.id identifies a data block related to the current data block.

getId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The value of _exptl_crystal.id must uniquely identify a record in the EXPTL_CRYSTAL list.

getId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The value of _exptl_crystal_grow_comp.id must uniquely identify each item in the EXPTL_CRYSTAL_GROW_COMP list.

getId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

A unique identifier for the 2dem class average fitting data.

getId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

A unique identifier for the 2dem class average.

getId() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

A unique identifier for the 3DEM restraint description.

getId() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

An identifier for the chemical descriptor.

getId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

A unique identifier for the cross link restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

A unique identifier for this category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

A unique identifier for the cross link record.

getId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

A unique identifier for the restraint/ensemble combination.

getId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

A unique identifier for the restraint/model combination.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetExternalReference

A unique identifier for the external data.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroup

A unique identifier for the dataset group.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetList

A unique identifier for the dataset.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

A unique identifier for the related database entry.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

A unique identifier for the transformation.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

A unique identifier for the derived angle restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

A unique identifier for the derived dihedral restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

A unique identifier for the derived distance restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

A unique id for the ensemble sub sample.

getId() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

A unique identifier for the polymeric segment.

getId() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

A unique identifier for each external file.

getId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

A unique identifier for this gaussian object.

getId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

A unique identifier for this gaussian object in the model.

getId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

A unique identifier for the center.

getId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

A unique id for the geometric object distance restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

A unique identifier for the transformation.

getId() - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

A unique identifier for the category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

A unique identifier for the hydroxyl radical footprinting restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

A unique identifier.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelGroup

A unique identifier for a collection or group of structural models.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

A unique identifier for the post modeling analysis/step combination.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocol

A unique identifier for the modeling protocol.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A unique identifier for the modeling protocol/step combination.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentation

A unique identifier for the model representation.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

A unique identifier for the category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentative

A unique identifier for the representative of the model group.

getId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

A unique identifier for the category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

A unique identifier for the category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

A unique identifier for the predicted contact restraint.

getId() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

An identifier to the pseudo site.

getId() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

A unique identifier for the category.

getId() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

A unique identifier for the SAS restraint description.

getId() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

A unique identifier for this pseudo atom / sphere object.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

A unique identifier for the starting comparative model.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The serial number for this coordinate position.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

A unique identifier for the entry.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssembly

A unique identifier for the structural assembly.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

A unique identifier for the structural assembly class.

getId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

A unique identifier for the structural assembly description.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.id in the ATOM_SITE category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxBuffer

The value of _pdbx_buffer.id must uniquely identify the sample buffer.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The value of _pdbx_buffer_components.id must uniquely identify a component of the buffer.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModel

The value of _pdbx_chem_comp_model.id must uniquely identify each model instance the PDBX_CHEM_COMP_MODEL list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

Ordinal index for the entities listed in this category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

Ordinal index for the interactions listed in this category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

The value of _pdbx_construct.id must uniquely identify a record in the PDBX_CONSTRUCT list and should be arranged so that it is composed of a site-speicific prefix combined with a value that is unique within a given site.Note that this item need not be a number; it can be any unique identifier.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The value of _pdbx_construct_feature.id must uniquely identify a record in the PDBX_CONSTRUCT_FEATURE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

A unique integer identifier for this author

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

Identifier for the type of obsolete entry to be added to this entry.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRemark

A unique identifier for the PDB remark record.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The ordered number of residue in the output list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The ordered number in the output list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

The value of _pdbx_distant_solvent_atoms.id must uniquely identify each item in the PDBX_DISTANT_SOLVENT_ATOMS list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDomain

The value of _pdbx_domain.id must uniquely identify a record in the PDBX_DOMAIN list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityAssembly

An identifier for the assembly.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

The value of _pdbx_entity_func_bind_mode.id is a unique identifier for a binding mode within a domain within an entity.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomy

This data item holds an node identifier in the entity name taxonomy tree.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomyTree

This data item identifies a node in the entity name taxonomy.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

The value of _pdbx_entity_poly_domain.id must uniquely identify a domain within an entity.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyGroupIndex

This data item is the identifier for the a group of related BIRD families.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

The value of _pdbx_feature_assembly.id uniquely identifies a feature in the PDBX_FEATURE_ASSEMBLY category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureDomain

The value of _pdbx_feature_domain.id uniquely identifies a feature in the PDBX_FEATURE_DOMAIN category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureEntry

The value of _pdbx_feature_entry.id uniquely identifies a feature in the PDBX_FEATURE_ENTRY category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

The value of _pdbx_feature_monomer.id uniquely identifies a feature in the PDBX_FEATURE_MONOMER category.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

The value of _pdbx_feature_sequence_range.id uniquely identifies a feature in the PDBX_FEATURE_SEQUENCE_RANGE category

getId() - Method in class org.rcsb.cif.schema.mm.PdbxHybrid

ID code.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxInhibitorInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxIonInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

The value of _pdbx_missing_atom_nonpoly.id must uniquely identify each item in the PDBX_MISSING_ATOM_NONPOLY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

The value of _pdbx_missing_atom_poly.id must uniquely identify each item in the PDBX_MISSING_ATOM_POLY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

An integer value that uniquely identifies a list of assigned chemical shifts from other sets of assigned chemical shifts in the entry.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

An integer value that uniquely identifies a set of chemical shift reference values from other sets of chemical shift referencing values.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Local unique identifier for the listed constraint file.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

An integer value that specifies the dimension of a multidimensional NMR spectrum.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Unique identifier for a spectral peak list in an entry.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

The value of _pdbx_nonstandard_list.id must uniquely identify each item in the PDBX_NONSTANDARD_LIST list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxPdbCompnd

NDB ID.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxPdbSource

NDB ID.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.id records phase set name for MAD phasing.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.id records phase set name for MAD phasing.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.id records the number of site obtained from MAD phasing.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxProteinInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The value of _pdbx_reference_linked_entity.id uniquely identifies examples in the list of observed linking patterns.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The value of _pdbx_refine_tls.id must uniquely identify a record in the PDBX_REFINE_TLS list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

The value of _pdbx_refine_tls_group.id must uniquely identify a record in the REFINE_TLS_GROUP list for a particular refinement.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

The value of pdbx_remediation_atom_site_mapping.id must uniquely identify a record in the PDBX_REMEDIATION_ATOM_SITE_MAPPING list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

The value of _pdbx_rmch_outlier.id must uniquely identify each item in the PDBX_RMCH_OUTLIER list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

The value of _pdbx_rms_devs_cov_by_monomer.id must uniquely identify each item in the PDBX_RMS_DEVS_COV_BY_MONOMER list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxRobotSystem

Assign a numerical ID to each instrument.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSGProject

A unique integer identifier for this center

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The value of _pdbx_soln_scatter.id must uniquely identify the sample in the category PDBX_SOLN_SCATTER

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

The value of _pdbx_soln_scatter_model.id must uniquely identify the sample in the category PDBX_SOLN_SCATTER_MODEL

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The value of pdbx_solvent_atom_site_mapping.id must uniquely identify a record in the PDBX_SOLVENT_ATOM_SITE_MAPPING list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

The value of _pdbx_stereochemistry.id must uniquely identify each item in the PDBX_STEREOCHEMISTRY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

The value of _pdbx_struct_assembly.id must uniquely identify a record in the PDBX_STRUCT_ASSEMBLY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

Identifies a unique record in pdbx_struct_assembly_auth_evidence.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

Identifies a unique record in pdbx_struct_assembly_auth_evidence_depositor_info.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

The value of _pdbx_struct_assembly_depositor_info.id must uniquely identify a record in the PDBX_STRUCT_ASSEMBLY_DEPOSITOR_INFO list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

The value of _pdbx_struct_assembly_gen_depositor_info.id must uniquely identify a record in the PDBX_STRUCT_ASSEMBLY_GEN_DEPOSITOR_INFO list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructBiolFunc

A code which must uniquely identify each function assigned to a biological assembly.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

The value of _pdbx_struct_conn_angle.id must uniquely identify a record in the PDBX_STRUCT_CONN_ANGLE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructEntityInst

The value of _pdbx_struct_entity_inst.id must uniquely identify a record in the PDBX_STRUCT_ENTITY_INST list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

This integer value must uniquely identify a record in the PDBX_STRUCT_LEGACY_OPER_LIST list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

The value of _pdbx_struct_link.id must uniquely identify a record in the PDBX_STRUCT_LINK list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

The value of _pdbx_struct_mod_residue.id must uniquely identify each item in the PDBX_STRUCT_MOD_RESIDUE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

Unique id for generator.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

This identifier code must uniquely identify a record in the PDBX_STRUCT_OPER_LIST list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

This identifier code must uniquely identify a record in the PDBX_STRUCT_OPER_LIST_DEPOSITOR_INFO list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Ordinal identifier

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

The value of _pdbx_struct_ref_seq_deletion.id must uniquely identify a record in the PDBX_STRUCT_REF_SEQ_DELETION list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

The value of _pdbx_struct_ref_seq_insertion.id must uniquely identify a record in the PDBX_STRUCT_REF_SEQ_INSERTION list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

The value of _pdbx_struct_special_symmetry.id must uniquely identify each item in the PDBX_STRUCT_SPECIAL_SYMMETRY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The value of _pdbx_sugar_phosphate_geometry.id must uniquely identify each item in the PDBX_SUGAR_PHOSPHATE_GEOMETRY list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxTrnaInfo

Serial number.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

The value of _pdbx_unobs_or_zero_occ_atoms.id must uniquely identify each item in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

The value of _pdbx_unobs_or_zero_occ_residues.id must uniquely identify each item in the PDBX_UNOBS_OR_ZERO_OCC_RESIDUES list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

The value of _pdbx_val_angle.id must uniquely identify each item in the PDBX_VAL_ANGLE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

The value of _pdbx_val_bond.id must uniquely identify each item in the PDBX_VAL_BOND list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

The value of _pdbx_val_chiral.id must uniquely identify each item in the PDBX_VAL_CHIRAL list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

The value of _pdbx_val_contact.id must uniquely identify each item in the PDBX_VAL_CONTACT list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

The value of _pdbx_validate_chiral.id must uniquely identify each item in the PDBX_VALIDATE_CHIRAL list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

The value of _pdbx_validate_close_contact.id must uniquely identify each item in the PDBX_VALIDATE_CLOSE_CONTACT list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

The value of _pdbx_validate_main_chain_plane.id must uniquely identify each item in the PDBX_VALIDATE_MAIN_CHAIN_PLANE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

The value of _pdbx_validate_peptide_omega.id must uniquely identify each item in the PDBX_VALIDATE_PEPTIDE_OMEGA list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

The value of _pdbx_validate_planes.id must uniquely identify each item in the PDBX_VALIDATE_PLANES list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

The value of _pdbx_validate_planes_atom.id must uniquely identify each item in the PDBX_VALIDATE_PLANES_ATOM list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

The value of _pdbx_validate_polymer_linkage.id must uniquely identify each item in the PDBX_VALIDATE_POLYMER_LINKAGE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

The value of _pdbx_validate_rmsd_angle.id must uniquely identify each item in the PDBX_VALIDATE_RMSD_ANGLE list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The value of _pdbx_validate_rmsd_bond.id must uniquely identify each item in the PDBX_VALIDATE_RMSD_BOND list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

The value of _pdbx_validate_symm_contact.id must uniquely identify each item in the PDBX_VALIDATE_SYMM_CONTACT list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

The value of _pdbx_validate_torsion.id must uniquely identify each item in the PDBX_VALIDATE_TORSION list.

getId() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

The value of _pdbx_val_sym_contact.id must uniquely identify each item in the PDBX_VAL_SYM_CONTACT list.

getId() - Method in class org.rcsb.cif.schema.mm.PhasingMADClust

The value of _phasing_MAD_clust.id must, together with _phasing_MAD_clust.expt_id, uniquely identify a record in the PHASING_MAD_CLUST list.

getId() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The value of _phasing_MAD_expt.id must uniquely identify each record in the PHASING_MAD_EXPT list.

getId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The value of _phasing_MIR_der.id must uniquely identify a record in the PHASING_MIR_DER list.

getId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The value of _phasing_MIR_der_site.id must uniquely identify each site in each derivative in the PHASING_MIR_DER_SITE list.

getId() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The value of _phasing_set.id must uniquely identify a record in the PHASING_SET list.

getId() - Method in class org.rcsb.cif.schema.mm.SpaceGroup

This is the unique identifier for the SPACE_GROUP category.

getId() - Method in class org.rcsb.cif.schema.mm.SpaceGroupSymop

An arbitrary identifier that uniquely labels each symmetry operation in the list.

getId() - Method in class org.rcsb.cif.schema.mm.StructAsym

The value of _struct_asym.id must uniquely identify a record in the STRUCT_ASYM list.

getId() - Method in class org.rcsb.cif.schema.mm.StructBiol

The value of _struct_biol.id must uniquely identify a record in the STRUCT_BIOL list.

getId() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The value of _struct_biol_view.id must uniquely identify a record in the STRUCT_BIOL_VIEW list.

getId() - Method in class org.rcsb.cif.schema.mm.StructConf

The value of _struct_conf.id must uniquely identify a record in the STRUCT_CONF list.

getId() - Method in class org.rcsb.cif.schema.mm.StructConfType

The descriptor that categorizes the type of the conformation of the backbone of the polymer (whether protein or nucleic acid).

getId() - Method in class org.rcsb.cif.schema.mm.StructConn

The value of _struct_conn.id must uniquely identify a record in the STRUCT_CONN list.

getId() - Method in class org.rcsb.cif.schema.mm.StructConnType

The chemical or structural type of the interaction.

getId() - Method in class org.rcsb.cif.schema.mm.StructNcsDom

The value of _struct_ncs_dom.id must uniquely identify a record in the STRUCT_NCS_DOM list.

getId() - Method in class org.rcsb.cif.schema.mm.StructNcsEns

The value of _struct_ncs_ens.id must uniquely identify a record in the STRUCT_NCS_ENS list.

getId() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The value of _struct_ncs_oper.id must uniquely identify a record in the STRUCT_NCS_OPER list.

getId() - Method in class org.rcsb.cif.schema.mm.StructRef

The value of _struct_ref.id must uniquely identify a record in the STRUCT_REF list.

getId() - Method in class org.rcsb.cif.schema.mm.StructSheet

The value of _struct_sheet.id must uniquely identify a record in the STRUCT_SHEET list.

getId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

The value of _struct_sheet_range.id must uniquely identify a range in a given sheet in the STRUCT_SHEET_RANGE list.

getId() - Method in class org.rcsb.cif.schema.mm.StructSite

The value of _struct_site.id must uniquely identify a record in the STRUCT_SITE list.

getId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

The value of _struct_site_gen.id must uniquely identify a record in the STRUCT_SITE_GEN list.

getId() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The value of _struct_site_view.id must uniquely identify a record in the STRUCT_SITE_VIEW list.

getId() - Method in class org.rcsb.cif.schema.mm.SymmetryEquiv

The value of _symmetry_equiv.id must uniquely identify a record in the SYMMETRY_EQUIV category.

getId() - Method in class org.rcsb.cif.schema.mm.ValenceParam

An identifier for the valence parameters of a bond between the given atoms.

getId() - Method in class org.rcsb.cif.schema.mm.ValenceRef

An identifier for items in this category.

getIdentifier() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

This data item contains the identifier value for this component.

getIdentifierInchi() - Method in class org.rcsb.cif.schema.core.Chemical

The IUPAC International Chemical Identifier (InChI) is a textual identifier for chemical substances, designed to provide a standard and human-readable way to encode molecular information and to facilitate the search for such information in databases and on the web.

getIdentifierInchiKey() - Method in class org.rcsb.cif.schema.core.Chemical

The InChIKey is a compact hashed version of the full InChI (IUPAC International Chemical Identifier), designed to allow for easy web searches of chemical compounds.

getIdentifierInchiVersion() - Method in class org.rcsb.cif.schema.core.Chemical

Version number of the InChI standard to which the associated chemical identifier string applies.

getIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.AuditAuthor

The Open Researcher and Contributor ID (ORCID).

getIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.CitationAuthor

The Open Researcher and Contributor ID (ORCID).

getIdentifierORCID() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The Open Researcher and Contributor ID (ORCID).

getIdIucr() - Method in class org.rcsb.cif.schema.core.PublAuthor

Identifier in the IUCr contact database of a publication author.

getIdIucr() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

Identifier in the IUCr contact database of the author submitting the manuscript and datablock.

getIdIucr() - Method in class org.rcsb.cif.schema.mm.PublAuthor

Identifier in the IUCr contact database of a publication author.

getIdOrcid() - Method in class org.rcsb.cif.schema.core.PublAuthor

Identifier in the ORCID Registry of a publication author.

getIdOrcid() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

Identifier in the ORCID Registry of the author submitting the manuscript and data block.

getIhm2demClassAverageFitting() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_2DEM_CLASS_AVERAGE_FITTING category records the details of the fitting of the model to the 2DEM class averages used in the IHM modeling.

getIhm2demClassAverageRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_2DEM_CLASS_AVERAGE_RESTRAINT category records the details of the 2DEM class averages used in the IHM modeling.

getIhm3demRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_3DEM_RESTRAINT category records the details of the 3DEM maps used as restraints in the IHM modeling.

getIhmChemicalComponentDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CHEMICAL_COMPONENT_DESCRIPTOR category records the details of the chemical descriptors of various non-polymeric chemical components (fluorescent probes, crosslinking agents etc.) used in the experiments.

getIhmCrossLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CROSS_LINK_LIST category records the list of spatial restraints derived from chemical crosslinking experiment.

getIhmCrossLinkPseudoSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CROSS_LINK_PSEUDO_SITE category records the details of the pseudo sites involved in the cross links.

getIhmCrossLinkRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CROSS_LINK_RESTRAINT category enumerates the implementation details of the chemical crosslinking restraints in the integrative modeling.

getIhmCrossLinkResult() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CROSS_LINK_RESULT category records the results of the crosslinking restraints in the IHM modeling.

getIhmCrossLinkResultParameters() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_CROSS_LINK_RESULT_PARAMETERS category records the results of the crosslinking restraint parameters in the IHM modeling.

getIhmDatasetExternalReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category provides additional details regarding input data hosted externally at other resources.

getIhmDatasetGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category to define groups or collections of input datasets.

getIhmDatasetGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

IHM_DATASET_GROUP_LINK category provides the list of datasets present in a particular group.

getIhmDatasetList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds the list of all datasets used in the IHM modeling.

getIhmDatasetRelatedDbReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds information related to data sources for the entry.

getIhmDataTransformation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_DATA_TRANSFORMATION category records the details of the rotation matrix and translation vector that can be applied to transform the data.

getIhmDerivedAngleRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_DERIVED_ANGLE_RESTRAINT category records the list of angle restraints used in the integrative modeling experiment.

getIhmDerivedDihedralRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_DERIVED_DIHEDRAL_RESTRAINT category records the list of dihedral restraints used in the integrative modeling experiment.

getIhmDerivedDistanceRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_DERIVED_DISTANCE_RESTRAINT category records the list of distance restraints used in the integrative modeling experiment.

getIhmEnsembleInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_ENSEMBLE_INFO category records the details of the model clusters or ensembles obtained after sampling.

getIhmEnsembleSubSample() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_ENSEMBLE_SUB_SAMPLE category records the details of the sub samples within the ensembles.

getIhmEntityPolySegment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_ENTITY_POLY_SEGMENT category identifies segments of polymeric entities.

getIhmEprRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_EPR_RESTRAINT category records the details of the EPR data used as restraints in the IHM modeling.

getIhmExternalFiles() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category provides details regarding external files.

getIhmExternalReferenceInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds links to other external data sources for the I/H model entry.

getIhmFeatureList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

IHM_FEATURE_LIST is the high level category that provides defintions to select atoms/residues from polymeric and non-polymeric entities.

getIhmGaussianObjEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GAUSSIAN_OBJ_ENSEMBLE category records the details of the gaussian objects representing an ensemble or cluster of models.

getIhmGaussianObjSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GAUSSIAN_OBJ_SITE category records the details of the gaussian objects modeled in the integrative structural model.

getIhmGeometricObjectAxis() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_AXIS category records the details of an axis used in a spatial restraint.

getIhmGeometricObjectCenter() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_CENTER category records the center of geometric objects used as restraints in the integrative modeling study.

getIhmGeometricObjectDistanceRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_DISTANCE_RESTRAINT category records the details of distance restraints involving geometric objects.

getIhmGeometricObjectHalfTorus() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_HALF_TORUS category records the parameters of half-torus that represents a membrane.

getIhmGeometricObjectList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_LIST category records the list of geometric objects used as restraints in the integrative modeling study.

getIhmGeometricObjectPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_PLANE category records the details of a plane used in a spatial restraint.

getIhmGeometricObjectSphere() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_SPHERE category records the parameters of a sphere.

getIhmGeometricObjectTorus() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_TORUS category records the parameters of a torus.

getIhmGeometricObjectTransformation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_GEOMETRIC_OBJECT_TRANSFORMATION category records the details of the rotation matrix and translation vector applied for transforming the geometric object.

getIhmHdxRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_HDX_RESTRAINT category captures the details of restraints derived from Hydrogen-Deuterium Exchange experiments.

getIhmHydroxylRadicalFpRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_HYDROXYL_RADICAL_FP_RESTRAINT category records the restraints derived from hydroxyl radical footprinting experiment.

getIhmInterfaceResidueFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_INTERFACE_RESIDUE_FEATURE category captures the details of residues that are identified to be at the binding interface from experiments.

getIhmLigandProbe() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_LIGAND_PROBE category identifies non-polymeric entities (ligands) that are used as probes.

getIhmLocalizationDensityFiles() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_LOCALIZATION_DENSITY_FILES category records the details of files that provide information regarding localization densities of ensembles.

getIhmModelGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

IHM_MODEL_GROUP category defines collections or groups of integrative structural models.

getIhmModelGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

IHM_MODEL_GROUP_LINK category provides the list of models present in a particular model group.

getIhmModelId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The model id corresponding to the atom site.

getIhmModelingPostProcess() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODELING_POST_PROCESS category records the details of the post processing of the models/results of the modeling protocol.

getIhmModelingProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODELING_PROTOCOL category lists all modeling protocols used in the integrative modeling study.

getIhmModelingProtocolDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODELING_PROTOCOL_DETAILS category records the step-wise details of the integrative modeling workflow.

getIhmModelList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODEL_LIST category record the details of the models being deposited.

getIhmModelRepresentation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODEL_REPRESENTATION category lists the various mono or multi-scale model representations used in the integrative modeling study.

getIhmModelRepresentationDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODEL_REPRESENTATION_DETAILS category records the details about the architecture and representation of structural models involved in the integrative modeling study.

getIhmModelRepresentative() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MODEL_REPRESENTATIVE category record the details of the representative model in an ensemble or cluster.

getIhmMultiStateModelGroupLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

IHM_MULTI_STATE_MODEL_GROUP_LINK category provides the list of models groups corresponding to a particular state.

getIhmMultiStateModeling() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_MULTI_STATE_MODELING category records the details of the multi-state modeling protocol, if applicable.

getIhmNonPolyFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_NON_POLY_FEATURE category provides the defintions required to select a non-polymeric (ligand) feature.

getIhmOrderedEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_ORDERED_ENSEMBLE category records the details of the ensembles ordered by time or other order.

getIhmPolyAtomFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_POLY_ATOM_FEATURE category provides the defintions required to select specific atoms.

getIhmPolyProbeConjugate() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_POLY_PROBE_CONJUGATE category records the details of the probes that are covalenty attached to residues in the polymeric entities.

getIhmPolyProbePosition() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_POLY_PROBE_POSITION category identifies specific residue positions in the polymeric entity where probes are covalently attached.

getIhmPolyResidueFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_POLY_RESIDUE_FEATURE category provides the defintions required to select a specific residue or a set of residues that may or may not be in a contiguous range.

getIhmPredictedContactRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_PREDICTED_CONTACT_RESTRAINT category records the list of predicted contacts used in the integrative modeling experiment.

getIhmProbeList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_PROBE_LIST category records the list of probes used in the experiment.

getIhmPseudoSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_PSEUDO_SITE_FEATURE category records the details of pseudo sites that may be used in the restraints or model representation.

getIhmPseudoSiteFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_PSEUDO_SITE_FEATURE category records the details of pseudo site features listed in IHM_FEATURE_LIST.

getIhmRelatedDatasets() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Category holds information about related datasets, where one is derived from the other.

getIhmResiduesNotModeled() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_RESIDUES_NOT_MODELED category record the details of the residues that are defined in the IHM_STRUCT_ASSEMBLY category but are missing in the three-dimensional model (ATOM_SITE, IHM_SPHERE_OBJ_SITE, IHM_GAUSSIAN_OBJ_SITE categories) i.e., residues in the assembly that are not modeled.

getIhmSasRestraint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_SAS_RESTRAINT category records the details of the SAS data used as restraints in the IHM modeling.

getIhmSphereObjSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_SPHERE_OBJ_SITE category records the details of the spherical objects modeled in the integrative structural model.

getIhmStartingComparativeModels() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STARTING_COMPARATIVE_MODELS category records additional details about comparative models used as starting inputs in the integrative model building process.

getIhmStartingComputationalModels() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STARTING_COMPUTATIONAL_MODELS category records additional details about computational models used as starting inputs in the integrative model building process.

getIhmStartingModelCoord() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STARTING_MODEL_COORD category records the coordinates for structural templates used as starting inputs in the integrative model building tasks.

getIhmStartingModelDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STARTING_MODEL_DETAILS category records the details about structural models used as starting inputs in the integrative model building process.

getIhmStartingModelSeqDif() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STARTING_MODEL_SEQ_DIF category provide a mechanism for indicating and annotating point differences between the sequence of the entity or biological unit described in the data block and the sequence of the starting model used in the integrative modeling referenced from a database.

getIhmStructAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STRUCT_ASSEMBLY category lists all the structural assemblies used in the integrative modeling study.

getIhmStructAssemblyClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STRUCT_ASSEMBLY_CLASS category lists all the structural assembly classes relevant to the entry.

getIhmStructAssemblyClassLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STRUCT_ASSEMBLY_CLASS_LINK category provides details regarding the structural assembly classes.

getIhmStructAssemblyDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the IHM_STRUCT_ASSEMBLY_DETAILS category records the details of the structural assemblies and used in the integrative modeling.

getILabelAsymId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the asym id of the i-th base in the base pair.

getILabelAsymId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the asym id of the i-th base in the first base pair of the step.

getILabelAsymId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the asym id of the i-th base in the second base pair of the step.

getILabelCompId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the component id of the i-th base in the base pair.

getILabelCompId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the component id of the i-th base in the first base pair of the step.

getILabelCompId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the component id of the i-th base in the second base pair of the step.

getILabelSeqId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the sequence number of the i-th base in the base pair.

getILabelSeqId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the sequence number of the i-th base in the first base pair of the step.

getILabelSeqId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the sequence number of the i-th base in the second base pair of the step.

getIlluminationMode() - Method in class org.rcsb.cif.schema.mm.EmImaging

The mode of illumination.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

Foreign key to the EM_IMAGE_PROCESSING category

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Pointer to _em_image_processing.id

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Foreign key to the EM_IMAGE_PROCESSING category

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

Foreign key to the EM_IMAGE_PROCESSING category

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmHelicalEntity

The value of _em_helical_entity.reconstruction_id identifies a particular reconstruction.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

The value of _em_particle_selection.image_processing_id points to the EM_IMAGE_PROCESSING category.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

pointer to _em_image_processing.id.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmSoftware

pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Foreign key to the EM_IMAGE_PROCESSING category

getImageProcessingId() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

The value of _em_volume_selection.image_processing_id points to the EM_IMAGE_PROCESSING category.

getImageRecordingId() - Method in class org.rcsb.cif.schema.mm.EmImageProcessing

Foreign key to the EM_IMAGE_RECORDING

getImageRecordingId() - Method in class org.rcsb.cif.schema.mm.EmImageScans

foreign key linked to _em_image_recording

getImageResolution() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Resolution of the 2dem class average.

getImageSegmentFlag() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

A flag that indicates whether or not the 2DEM class average image is segmented i.e., whether the whole image is used or only a portion of it is used (by masking or by other means) as restraint in the modeling.

getImagingId() - Method in class org.rcsb.cif.schema.mm.EmDiffraction

Foreign key to the EM_IMAGING category

getImagingId() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

This data item the id of the microscopy settings used in the imaging.

getImagingId() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

Foreign key to the EM IMAGING category

getImagingId() - Method in class org.rcsb.cif.schema.mm.EmSoftware

pointer to _em_imaging.id in the EM_IMAGING category.

getImagingId() - Method in class org.rcsb.cif.schema.mm.EmTomography

Foreign key to the EM IMAGING category

getImproperTorsionAngle() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

The value for the torsion angle C(i-1) - CA(i-1) - N(i) - O(i-1)

getImproperTorsionAngleRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The improper torsion angle rmsd to the target values for the ensemble.

getImproperTorsionAngleRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error in the improper torsion angle rmsd.

getInchi() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The IUPAC INCHI descriptor of the component.

getInchiKey() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The hashed INCHI key of the component.

getInclination() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step inclination parameter.

getIncludeStatus() - Method in class org.rcsb.cif.schema.core.Refln

Code indicating how the reflection was included in the refinement and R-factor calculations.

getIncludeStatus() - Method in class org.rcsb.cif.schema.mm.Refln

Classification of a reflection so as to indicate its status with respect to inclusion in the refinement and the calculation of R factors.

getIndex() - Method in class org.rcsb.cif.schema.core.ModelSite

Index number of an atomic site in the connected molecule.

getIndexH() - Method in class org.rcsb.cif.schema.core.CellMeasurementRefln

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.core.Refln

The index of a reciprocal space vector.

getIndexH() - Method in class org.rcsb.cif.schema.mm.CellMeasurementRefln

Miller index h of a reflection used for measurement of the unit cell.

getIndexH() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Miller index h of a reflection used to define the orientation matrix.

getIndexH() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Miller index h of a reflection.

getIndexH() - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

Miller index h of a standard reflection used in the diffraction measurement process.

getIndexH() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

Miller index h of the crystal face associated with the value _exptl_crystal_face.perp_dist.

getIndexH() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

Miller index h for this reflection for this derivative.

getIndexH() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

Miller index h of this reflection in this data set.

getIndexH() - Method in class org.rcsb.cif.schema.mm.Refln

Miller index h of the reflection.

getIndexH() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

Miller index h of the reflection.

getIndexK() - Method in class org.rcsb.cif.schema.core.CellMeasurementRefln

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.core.Refln

The index of a reciprocal space vector.

getIndexK() - Method in class org.rcsb.cif.schema.mm.CellMeasurementRefln

Miller index k of a reflection used for measurement of the unit cell.

getIndexK() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Miller index k of a reflection used to define the orientation matrix.

getIndexK() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Miller index k of a reflection.

getIndexK() - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

Miller index k of a standard reflection used in the diffraction measurement process.

getIndexK() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

Miller index k of the crystal face associated with the value _exptl_crystal_face.perp_dist.

getIndexK() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

Miller index k for this reflection for this derivative.

getIndexK() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

Miller index k of this reflection in this data set.

getIndexK() - Method in class org.rcsb.cif.schema.mm.Refln

Miller index k of the reflection.

getIndexK() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

Miller index k of the reflection.

getIndexL() - Method in class org.rcsb.cif.schema.core.CellMeasurementRefln

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.core.DiffrnOrientRefln

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.core.DiffrnStandardRefln

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.core.Refln

The index of a reciprocal space vector.

getIndexL() - Method in class org.rcsb.cif.schema.mm.CellMeasurementRefln

Miller index l of a reflection used for measurement of the unit cell.

getIndexL() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientRefln

Miller index l of a reflection used to define the orientation matrix.

getIndexL() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Miller index l of a reflection.

getIndexL() - Method in class org.rcsb.cif.schema.mm.DiffrnStandardRefln

Miller index l of a standard reflection used in the diffraction measurement process.

getIndexL() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

Miller index l of the crystal face associated with the value _exptl_crystal_face.perp_dist.

getIndexL() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

Miller index l for this reflection for this derivative.

getIndexL() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

Miller index l of this reflection in this data set.

getIndexL() - Method in class org.rcsb.cif.schema.mm.Refln

Miller index l of the reflection.

getIndexL() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

Miller index l of the reflection.

getInDictionaryFlag() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

A flag to indicate if the chemical component is defined in the chemical component dictionary.

getIndirectShiftRatio() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The Chi value used in calculating the chemical shift referencing values for nuclei that are referenced indirectly.

getInducer() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The chemical name of the inducing agent.

getInducerConcentration() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Concentration of the inducing agent.

getInductionDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Details of induction/transformation/transfection.

getInductionTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The temperature in celsius at which the induced/transformed/transfected cells were grown.

getInductionTimepoint() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The time in hours after induction/transformation/transfection at which the optical density of the culture was measured.

getINet() - Method in class org.rcsb.cif.schema.core.DiffrnScaleGroup

Scale for a specific measurement group of eflections.

getINet() - Method in class org.rcsb.cif.schema.mm.DiffrnScaleGroup

The scale for a specific measurement group which is to be multiplied with the net intensity to place all intensities in the DIFFRN_REFLN or REFLN list on a common scale.

getInfo() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

A short note indicating the reason why the author wishes the corresponding data item marked for inclusion in the journal request list to be published.

getInfo() - Method in class org.rcsb.cif.schema.core.PublManuscriptInclExtra

A short note indicating the reason why the author wishes the corresponding data item marked for inclusion in the journal request list to be published.

getInhomogeneity() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Half-width of the incident beam perpendicular to the diffraction plane.

getInhomogeneity() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Half-width in millimetres of the incident beam in the direction perpendicular to the diffraction plane.

getInitialOfCenter() - Method in class org.rcsb.cif.schema.mm.PdbxSGProject

The value identifies the full name of center.

getInitialThickness() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Initial sample thickness

getInjectorDiameter() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the diameter of the injector in micrometres.

getInjectorNozzle() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

The type of nozzle to deliver and focus sample jet

getInjectorPressure() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the mean pressure in kilopascals at which the sample is injected into the beam.

getInjectorTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

For continuous sample flow experiments, the temperature in Kelvins of the speciman injected.

getInPolymerFlag() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

A flag to indicate if the chemical component instance is a part of a polymer molecule.

getInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Insertion code of het group.

getInsertCode1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The residue insertion code for the first of the two components making the non-standard linkage.

getInsertCode2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The residue insertion code for the second of the two components making the non-standard linkage.

getInsilicoModel() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Description of the "in silico" model used to generate the startup model

getInstanceId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityInstanceList

The value of _pdbx_linked_entity_instance_list.instance_id is identifies a particular molecule instance within an entry.

getInstanceId() - Method in class org.rcsb.cif.schema.mm.PdbxMolecule

The value of _pdbx_molecule.instance_id is identifies a particular molecule in the molecule list.

getInstrument() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Instrument used to prepare the crystalline array

getInstrument() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

The instrument used for focused ion beam sectioning

getInstrument() - Method in class org.rcsb.cif.schema.mm.EmHighPressureFreezing

The instrument used for high pressure freezing.

getInstrument() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

Ultramicrotome instrument used for sectioning

getInstrument() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The type of instrument used in the vitrification process.

getIntensity() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Colour intensity of the crystal as prescribed state codes.

getIntensity() - Method in class org.rcsb.cif.schema.core.ExptlCrystalAppearance

Colour intensity of the crystal as prescribed state codes.

getIntensityCalc() - Method in class org.rcsb.cif.schema.core.Refln

The intensity of the reflection calculated from the atom site data.

getIntensityCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the intensity in the same units as _refln.intensity_meas.

getIntensityMeas() - Method in class org.rcsb.cif.schema.core.Refln

The intensity of the reflection derived from the diffraction measurements.

getIntensityMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured value of the intensity.

getIntensityMeasSu() - Method in class org.rcsb.cif.schema.core.Refln

standard uncertainty of the measured intensity.

getIntensityNet() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensityNet() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensityNetSu() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Standard uncertainty of the net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensitySigma() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Standard uncertainty of the net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensitySigma() - Method in class org.rcsb.cif.schema.core.Refln

standard uncertainty of the measured intensity.

getIntensitySigma() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Standard uncertainty (estimated standard deviation) of the intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensitySigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the intensity in the same units as _refln.intensity_meas.

getIntensityU() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Standard uncertainty of the net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getIntensityU() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

Standard uncertainty of the net intensity calculated from the diffraction counts after the attenuator and standard scales have been applied.

getInterfaceResidueFlag() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

A flag to indicate if the feature is an interface residue, identified by experiments and therefore, used to build spatial restraints during modeling.

getInternalDepositionId() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

The deposition id that corresponds to this millestone file

getInternalVersion() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

An internal version number corresponding to millestone file

getIntervalCount() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

Reflection count between the standard reflection measurements.

getIntervalCount() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

Reflection count between the standard reflection measurements.

getIntervalCount() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The number of reflection intensities between the measurement of standard reflection intensities.

getIntervalTime() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

Time between the standard reflection measurements.

getIntervalTime() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

Time between the standard reflection measurements.

getIntervalTime() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The time in minutes between the measurement of standard reflection intensities.

getIntroduction() - Method in class org.rcsb.cif.schema.core.Publ

The introduction section of the submitted paper.

getIntroduction() - Method in class org.rcsb.cif.schema.core.PublSection

The introduction section of the submitted paper.

getIntTablesNumber() - Method in class org.rcsb.cif.schema.core.Symmetry

The number as assigned in International Tables for Crystallography Vol A, specifying the proper affine class (i.e.

getIntTablesNumber() - Method in class org.rcsb.cif.schema.mm.Symmetry

Space-group number from International Tables for Crystallography Vol.

getIon() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

The ion source used to ablate the specimen

getIonicStrength() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The ionic strength at which the NMR data were collected -in lieu of this enter the concentration and identity of the salt in the sample.

getIonicStrengthErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Estimate of the standard error for the value for the sample ionic strength.

getIonicStrengthUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Units for the value of the sample condition ionic strength..

getIOverSigIDiff() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The difference of the <I/SigmaI> in the last two points of the plot of <I/SigmaI> vs resolution (expected to be negative).

getIOverSigIMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The overall mean value of <I/SigmaI> for the reflections.

getIOverSigIResh() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The <I/SigmaI> at the highest resolution bin calculated by Xtriage.

getIOverSigmaI() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

The ratio of _refln_sys_abs.I to _refln_sys_abs.sigmaI.

getIPDBInsCode() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the PDB insertion code of the i-th base in the base pair.

getIPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the PDB insertion code of the i-th base in the first base pair of the step.

getIPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the PDB insertion code of the i-th base in the second base pair of the step.

getIprId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The InterPro (IPR) identifier for the component.

getIsGrantFunded() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that the deposition was grant funded.

getIsLigandProcessingComplete() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that ligand processing is complete

getIsoBValueType() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The type of B factors (partial or full) for the residue.

getIsotopicLabeling() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The isotopic composition of each component, including the % labeling level, if known.

getIsotopicLabeling() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The isotopic composition of each component, including the % labeling level, if known.

getIsSasDeposited() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate whether related SAXS/SANS data is already deposited elsewhere

getISSNCodeType() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

The International Standard Serial Number (ISSN/ISBN/ESSN) code type.

getISSNCodeValue() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

The International Standard Serial Number (ISSN) code value.

getIssue() - Method in class org.rcsb.cif.schema.core.Journal

Issue identifier within the journal.

getIssue() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getISymmetry() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the symmetry operation that should be applied to the coordinates of the i-th base to generate the first partner in the base pair.

getISymmetry1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the symmetry operation that should be applied to the coordinates of the i-th base to generate the first partner in the first base pair of the step.

getISymmetry2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the symmetry operation that should be applied to the coordinates of the i-th base to generate the first partner in the second base pair of the step.

getITCoordinateSystemCode() - Method in class org.rcsb.cif.schema.core.SpaceGroup

A qualifier taken from the enumeration list identifying which setting in International Tables for Crystallography Volume A (2002) (IT) is used.

getItem() - Method in class org.rcsb.cif.schema.core.PublManuscriptIncl

The data name (i.e.

getItem() - Method in class org.rcsb.cif.schema.core.PublManuscriptInclExtra

The data name (i.e.

getItem() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

A high level explanation the author has provided for submitting a revision.

getItemName() - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

The mmCIF item name.

getItemViewAllowAlternateValue() - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

A code to indicate if the view should permit alternatives to enumerated item values.

getItemViewMandatoryCode() - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

A code to indicate the role of the data item in the view.

getItemViewName() - Method in class org.rcsb.cif.schema.mm.PdbxViewItem

An alias name for the mmCIF item in this view.

getIterativeRelaxationMatrix() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used for iterative relaxation matrix methods.

getIterativeRelaxationMatrixVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used for iterative relaxation matrix methods.

getITNumber() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The number as assigned in International Tables for Crystallography Vol A, specifying the proper affine class (i.e.

getITNumber() - Method in class org.rcsb.cif.schema.mm.SpaceGroup

The number as assigned in International Tables for Crystallography Vol.

getIupac() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Formula expressed in conformance with IUPAC rules for inorganic and metal-organic compounds where these conflict with the rules for any other chemical_formula entries.

getIupac() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

Formula expressed in conformance with IUPAC rules for inorganic and metal-organic compounds where these conflict with the rules for any other CHEMICAL_FORMULA entries.

getJAuthAsymId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the asym id of the j-th base in the base pair.

getJAuthAsymId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's asym id of the j-th base in the first base pair of the step.

getJAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's asym id of the j-th base in the second base pair of the step.

getJAuthSeqId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the sequence number of the j-th base in the base pair.

getJAuthSeqId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's sequence number of the j-th base in the first base pair of the step.

getJAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the author's sequence number of the j-th base in the second base pair of the step.

getJetDiameter() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

Diameter in micrometres of jet stream of sample delivery

getJLabelAsymId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the asym id of the j-th base in the base pair.

getJLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the asym id of the j-th base in the first base pair of the step.

getJLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the asym id of the j-th base in the second base pair of the step.

getJLabelCompId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the component id of the j-th base in the base pair.

getJLabelCompId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the component id of the j-th base in the first base pair of the step.

getJLabelCompId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the component id of the j-th base in the second base pair of the step.

getJLabelSeqId() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the sequence number of the j-th base in the base pair.

getJLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the sequence number of the j-th base in the first base pair of the step.

getJLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the sequence number of the j-th base in the second base pair of the step.

getJournal() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items recording details about the book-keeping by the journal staff when processing a CIF submitted for publication.

getJournal() - Method in class org.rcsb.cif.schema.core.Publ

Name of the journal to which the manuscript is being submitted.

getJournal() - Method in class org.rcsb.cif.schema.core.PublRequested

Name of the journal to which the manuscript is being submitted.

getJournal() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the JOURNAL category record details about the book-keeping by the journal staff when processing a data block submitted for publication.

getJournalAbbrev() - Method in class org.rcsb.cif.schema.core.Citation

Abbreviated name of the journal cited as given in the Chemical Abstracts Service Source Index.

getJournalAbbrev() - Method in class org.rcsb.cif.schema.mm.Citation

Abbreviated name of the cited journal as given in the Chemical Abstracts Service Source Index.

getJournalASTM() - Method in class org.rcsb.cif.schema.core.Database

ASTM CODEN designator for a journal as given in the Chemical Source List maintained by the Chemical Abstracts Service.

getJournalASTM() - Method in class org.rcsb.cif.schema.mm.Database

The ASTM CODEN designator for a journal as given in the Chemical Source List maintained by the Chemical Abstracts Service.

getJournalCoeditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items recording co-editor details.

getJournalCSD() - Method in class org.rcsb.cif.schema.core.Database

The journal code used in the Cambridge Structural Database.

getJournalCSD() - Method in class org.rcsb.cif.schema.mm.Database

The journal code used in the Cambridge Structural Database.

getJournalDate() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items recording dates of publication processing.

getJournalFull() - Method in class org.rcsb.cif.schema.core.Citation

Full name of the journal cited; relevant for journal articles.

getJournalFull() - Method in class org.rcsb.cif.schema.mm.Citation

Full name of the cited journal; relevant for journal articles.

getJournalIdASTM() - Method in class org.rcsb.cif.schema.core.Citation

American Society for the Testing of Materials (ASTM) code assigned to the journal cited (also referred to as the CODEN designator of the Chemical Abstracts Service); relevant for journal articles.

getJournalIdASTM() - Method in class org.rcsb.cif.schema.mm.Citation

The American Society for Testing and Materials (ASTM) code assigned to the journal cited (also referred to as the CODEN designator of the Chemical Abstracts Service); relevant for journal articles.

getJournalIdCSD() - Method in class org.rcsb.cif.schema.core.Citation

The Cambridge Structural Database (CSD) code assigned to the journal cited; relevant for journal articles.

getJournalIdCSD() - Method in class org.rcsb.cif.schema.mm.Citation

The Cambridge Structural Database (CSD) code assigned to the journal cited; relevant for journal articles.

getJournalIdISSN() - Method in class org.rcsb.cif.schema.core.Citation

The International Standard Serial Number (ISSN) code assigned to the journal cited; relevant for journal articles.

getJournalIdISSN() - Method in class org.rcsb.cif.schema.mm.Citation

The International Standard Serial Number (ISSN) code assigned to the journal cited; relevant for journal articles.

getJournalIndex() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items describing publication indices.

getJournalIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the JOURNAL_INDEX category are used to list terms used to generate the journal indexes.

getJournalIssue() - Method in class org.rcsb.cif.schema.core.Citation

Issue number of the journal cited; relevant for articles.

getJournalIssue() - Method in class org.rcsb.cif.schema.mm.Citation

Issue number of the journal cited; relevant for journal articles.

getJournalTecheditor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items recording details of the technical editor processing this publication.

getJournalVolume() - Method in class org.rcsb.cif.schema.core.Citation

Volume number of the journal cited; relevant for articles.

getJournalVolume() - Method in class org.rcsb.cif.schema.mm.Citation

Volume number of the journal cited; relevant for journal articles.

getJPDBInsCode() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the PDB insertion code of the j-th base in the base pair.

getJPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the PDB insertion code of the j-th base in the first base pair of the step.

getJPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the PDB insertion code of the j-th base in the second base pair of the step.

getJSymmetry() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the symmetry operation that should be applied to the coordinates of the j-th base to generate the second partner in the base pair.

getJSymmetry1() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the symmetry operation that should be applied to the coordinates of the j-th base to generate the second partner in the first base pair of the step.

getJSymmetry2() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the symmetry operation that should be applied to the coordinates of the j-th base to generate the second partner in the second base pair of the step.

getKey() - Method in class org.rcsb.cif.schema.core.AtomType

Value is a unique key to a set of ATOM_TYPE items in a looped list.

getKey() - Method in class org.rcsb.cif.schema.core.CitationAuthor

Value is a unique key to a set of CITATION_AUTHOR items in a looped list.

getKey() - Method in class org.rcsb.cif.schema.core.SpaceGroupGenerator

Arbitrary identifier for each entry in the _space_group_generator.xyz list.

getKeywords() - Method in class org.rcsb.cif.schema.core.Publ

The keywords of the submitted paper.

getKeywords() - Method in class org.rcsb.cif.schema.core.PublSection

The keywords of the submitted paper.

getKSolvent() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

One of the scale factors used in the bulk solvent correction (from REFMAC).

getL11() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL11Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getL12() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL12Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getL13() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL13Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getL22() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL22Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getL23() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL23Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getL33() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the libration tensor L.

getL33Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.L.

getLabel() - Method in class org.rcsb.cif.schema.core.AtomSite

This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.

getLabel() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

Anisotropic atomic displacement parameters are usually looped in a separate list.

getLabel() - Method in class org.rcsb.cif.schema.core.ModelSite

Code identifies a site in the atom_site category of data.

getLabel() - Method in class org.rcsb.cif.schema.core.PublBody

Unigue identifier for each part of the body of the paper.

getLabel() - Method in class org.rcsb.cif.schema.mm.EmMap

text stored in the label field of the CCP4 map header (WORDS 57-256)

getLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

A descriptive label that uniquely identifies a list of reported assigned chemical shifts.

getLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A descriptive label that uniquely identifies this list of chemical shift referencing parameters used in reporting assigned chemical shifts and other chemical shift data.

getLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

A descriptive label that uniquely identifies this set of sample conditions.

getLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

A value that uniquely identifies this sample from the other samples listed in the entry.

getLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

A descriptive label that uniquely identifies a list of reported spectral peaks.

getLabel() - Method in class org.rcsb.cif.schema.mm.PublBody

Code identifying the section of text.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.AtomSite

A place holder to indicate alternate conformation.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_sites_alt.id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

An element of the chemical component instance identifier.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Author provided alternate location identifier.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The author provided alternate location identifier.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the atom_site identifier.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the atom_site identifier.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Part of the identifier of the residue This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

Optional identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

Optional identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

Optional identifier of the residue This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getLabelAltId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 1 of the angle connection.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 1 of the bond connection.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

An optional identifier of the first of the two atoms that define the close contact.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Optional identifier of the first residue in the torsion angle This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

An optional identifier of the first of the two atoms that define the linkage.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

An optional identifier of the first of the three atoms that define the covalent angle.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

An optional identifier of the first of the two atoms that define the covalent bond.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

An optional identifier of the first of the two atoms that define the close contact.

getLabelAltId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 2 of the angle connection.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 2 of the bond connection.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

An optional identifier of the second of the two atoms that define the close contact.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Optional identifier of the second residue in the torsion angle This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

An optional identifier of the second of the two atoms that define the linkage.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

An optional identifier of the second of the three atoms that define the covalent angle.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

An optional identifier of the second of the two atoms that define the covalent bond.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

An optional identifier of the second of the two atoms that define the close contact.

getLabelAltId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getLabelAltId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 3 of the angle connection.

getLabelAltId3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

An optional identifier of the third of the three atoms that define the covalent angle.

getLabelAltIdU() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Alt_id for stereochemically related atom U.

getLabelAltIdV() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Alt_id for stereochemically related atom V.

getLabelAltIdW() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Alt_id for stereochemically related atom W.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.AtomSite

A component of the identifier for this atom site.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Chain ID of het group.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the atom_site identifier.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSequencePattern

The identifier of the asym_id of the strand containing the sequence pattern.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the atom_site identifier.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 1 of the angle connection.

getLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 1 of the bond connection.

getLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getLabelAsymId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 2 of the angle connection.

getLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 2 of the bond connection.

getLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getLabelAsymId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 3 of the angle connection.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.AtomSite

A component of the identifier for this atom site.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the atom_site identifier.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the atom_site identifier.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getLabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 1 of the angle connection.

getLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 1 of the bond connection.

getLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getLabelAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 2 of the angle connection.

getLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 2 of the bond connection.

getLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getLabelAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getLabelAtomId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 3 of the angle connection.

getLabelAtomIdU() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Stereochemically related atom U.

getLabelAtomIdV() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Stereochemically related atom V.

getLabelAtomIdW() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Stereochemically related atom W.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.AtomSite

A component of the identifier for this atom site.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

Identifier of the residue.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the atom_site identifier.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the atom_site identifier.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 1 of the angle connection.

getLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 1 of the bond connection.

getLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getLabelCompId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 2 of the angle connection.

getLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 2 of the bond connection.

getLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getLabelCompId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getLabelCompId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 3 of the angle connection.

getLabelComponent0() - Method in class org.rcsb.cif.schema.core.AtomSite

Component_0 is normally a code which matches identically with one of the _atom_type.symbol codes.

getLabelComponent1() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelComponent2() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelComponent3() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelComponent4() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelComponent5() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelComponent6() - Method in class org.rcsb.cif.schema.core.AtomSite

See label_component_0 description.

getLabelEntityId() - Method in class org.rcsb.cif.schema.mm.AtomSite

This data item is a pointer to _entity.id in the ENTITY category.

getLabelInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The PDB insertion code.

getLabelInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

PDB insertion code.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.AtomSite

This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

A component of the identifier for the monomer.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

Identifier of the residue.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

An index in the sequence specified in category ENTITY_POLY_SEQ.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Residue id of het group.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the atom_site identifier.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

Identifier of the residue.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the atom_site identifier.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the unobserved or zero occupancy residue.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

Identifier of the residue.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

A component of the identifier for participants in the site.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonProt

A component of the identifier for the monomer.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

A component of the identifier for the monomer.

getLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

A component of the identifier for participants in the site.

getLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 1 of the angle connection.

getLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 1 of the bond connection.

getLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 1 of the close contact.

getLabelSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 1 of the close contact.

getLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 2 of the angle connection.

getLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

A component of the identifier for partner 2 of the bond connection.

getLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

A component of the identifier for partner 2 of the close contact.

getLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

A component of the identifier for partner 2 of the close contact.

getLabelSeqId3() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

A component of the identifier for partner 3 of the angle connection.

getLabelSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

Residue number of het group.

getLanguage() - Method in class org.rcsb.cif.schema.core.Citation

Language in which the citation appears.

getLanguage() - Method in class org.rcsb.cif.schema.core.Journal

Language of the publication.

getLanguage() - Method in class org.rcsb.cif.schema.mm.Citation

Language in which the cited article is written.

getLanguage() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getLanguage() - Method in class org.rcsb.cif.schema.mm.Software

The major computing language in which the software is coded.

getLastUpdate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date of last update to the file

getLatticesIndexed() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For experiments in which samples are provided in a continuous stream, the total number of lattices indexed.

getLaueClass() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The Hermann-Mauguin symbol of the geometric crystal class of the point group of the space group where a centre of inversion is added if not already present.

getLaueMeasuredFractionFull() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Fraction of Laue group unique reflections (symmetry-independent in the Laue group) measured out to the resolution given in _diffrn_reflns.resolution_full or _diffrn_reflns.theta_full.

getLaueMeasuredFractionMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Fraction of Laue-group unique reflections (symmetry-independent in the Laue group) measured out to the resolution given in _diffrn_reflns.resolution_max or _diffrn_reflns.theta_max.

getLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The leaving atom identifier/name bonded to the first atom making the linkage.

getLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The leaving atom identifier/name bonded to the first atom making the linkage.

getLeavingAtomId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The leaving atom identifier/name bonded to the first atom making the linkage.

getLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The leaving atom identifier/name bonded to the second atom making the linkage.

getLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The leaving atom identifier/name bonded to the second atom making the linkage.

getLeavingAtomId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The leaving atom identifier/name bonded to the second atom making the linkage.

getLegacyAddress() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed transfered from _audit_contact_author.address

getLengthA() - Method in class org.rcsb.cif.schema.core.Cell

The length of each cell axis.

getLengthA() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell length a corresponding to the structure reported in angstroms.

getLengthA() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Unit-cell length a in Angstroms.

getLengthA() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell length a in Angstroms.

getLengthAEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthAEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.length_a.

getLengthASu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthB() - Method in class org.rcsb.cif.schema.core.Cell

The length of each cell axis.

getLengthB() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell length b corresponding to the structure reported in angstroms.

getLengthB() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Unit-cell length b in Angstroms.

getLengthB() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell length b in Angstroms.

getLengthBEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthBEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.length_b.

getLengthBSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthC() - Method in class org.rcsb.cif.schema.core.Cell

The length of each cell axis.

getLengthC() - Method in class org.rcsb.cif.schema.mm.Cell

Unit-cell length c corresponding to the structure reported in angstroms.

getLengthC() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

Thickness of 2D crystal

getLengthC() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Unit-cell length c in Angstroms.

getLengthCEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthCEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.length_c.

getLengthCSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the length of each cell axis.

getLengthNeutron() - Method in class org.rcsb.cif.schema.core.AtomType

The bound coherent scattering length for the atom type at the isotopic composition used for the diffraction experiment.

getLengthNeutron() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The bound coherent scattering length for the atom type at the isotopic composition used for the diffraction experiment.

getLetter() - Method in class org.rcsb.cif.schema.core.SpaceGroupWyckoff

The Wyckoff letter associated with this position, as given in International Tables for Crystallography Volume A.

getLigationEnzymes() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

The names of the enzymes used to ligate the gene into the cleaved vector.

getLimitCol() - Method in class org.rcsb.cif.schema.mm.EmMap

The final column position of the map relative to the Cartesian coordinate origin in voxel grid units.

getLimitHMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitHMax() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitHMax() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The maximum value of the Miller index h for the reflection data specified by _diffrn_refln.index_h.

getLimitHMax() - Method in class org.rcsb.cif.schema.mm.Reflns

Maximum value of the Miller index h for the reflection data.

getLimitHMin() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitHMin() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitHMin() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The minimum value of the Miller index h for the reflection data specified by _diffrn_refln.index_h.

getLimitHMin() - Method in class org.rcsb.cif.schema.mm.Reflns

Minimum value of the Miller index h for the reflection data.

getLimitKMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitKMax() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitKMax() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The maximum value of the Miller index k for the reflection data specified by _diffrn_refln.index_k.

getLimitKMax() - Method in class org.rcsb.cif.schema.mm.Reflns

Maximum value of the Miller index k for the reflection data.

getLimitKMin() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitKMin() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitKMin() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The minimum value of the Miller index k for the reflection data specified by _diffrn_refln.index_k.

getLimitKMin() - Method in class org.rcsb.cif.schema.mm.Reflns

Minimum value of the Miller index k for the reflection data.

getLimitLMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitLMax() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitLMax() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The maximum value of the Miller index l for the reflection data specified by _diffrn_refln.index_l.

getLimitLMax() - Method in class org.rcsb.cif.schema.mm.Reflns

Maximum value of the Miller index l for the reflection data.

getLimitLMin() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The index of a reciprocal space vector.

getLimitLMin() - Method in class org.rcsb.cif.schema.core.Reflns

The index of a reciprocal space vector.

getLimitLMin() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The minimum value of the Miller index l for the reflection data specified by _diffrn_refln.index_l.

getLimitLMin() - Method in class org.rcsb.cif.schema.mm.Reflns

Minimum value of the Miller index l for the reflection data.

getLimitMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Maximum Miller indices of measured diffraction reflections.

getLimitMax() - Method in class org.rcsb.cif.schema.core.Reflns

Maximum Miller indices of refined diffraction reflections.

getLimitMin() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Minimum Miller indices of meas.ued diffraction reflections.

getLimitRow() - Method in class org.rcsb.cif.schema.mm.EmMap

The final row position of the map relative to the Cartesian coordinate origin in voxel grid units.

getLimitSec() - Method in class org.rcsb.cif.schema.mm.EmMap

The final section position of the map relative to the Cartesian coordinate origin in voxel grid units.

getLink() - Method in class org.rcsb.cif.schema.mm.EmDbReferenceAuxiliary

Hyperlink to the auxiliary data.

getLinkClass() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

A code indicating the entity types involved in the linkage.

getLinkClass() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

A code indicating the entity types involved in the linkage.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

The value of _pdbx_linked_entity.linked_entity_id is the unique identifier for the molecule represented as a collection of linked entities.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityInstanceList

The value of _pdbx_linked_entity_instance_list.linked_entity_id is a reference to the identifier for a molecule represented as a linked entity.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The value of _pdbx_linked_entity_link_list.linked_entity_id is a reference _pdbx_linked_entity_list.linked_entity_id in the PDBX_LINKED_ENTITY_LIST category.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

The value of _pdbx_linked_entity_list.linked_entity_id is a reference _pdbx_linked_entity.linked_entity_id in the PDBX_LINKED_ENTITY category.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxMolecule

A reference to _pdbx_linked_entity.linked_entity_id in the PDBX_LINKED_ENTITY category.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The value of _pdbx_reference_linked_entity_comp_link.linked_entity_id is a reference _pdbx_reference_linked_entity_comp_list.linked_entity_id in the pdbx_reference_linked_entity_comp_list category.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

This data item is a pointer to _pdbx_reference_linked_entity.id in the pdbx_reference_linked_entity category.

getLinkedEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The value of _pdbx_reference_linked_entity_link.linked_entity_id is a reference _pdbx_reference_linked_entity_comp_list.linked_entity_id in the pdbx_reference_linked_entity_comp_list category.

getLinkerChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

Pointer to the chemical description of the linker.

getLinkerFlag() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

A flag to indicate if the angle is between two residues

getLinkerFlag() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

A flag to indicate if the bond is between two residues

getLinkerType() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The type of crosslinker used.

getLinkFromEntityType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The polymer linking type of the second partner entity in example linkage.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemCompLink

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlane

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTor

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.EntityLink

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The value of _pdbx_entity_branch_link.link_id uniquely identifies linkages within the branched entity.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The value of _pdbx_entity_poly_comp_link_list.link_id uniquely identifies linkages within the branched entity.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The value of _pdbx_linked_entity_link_list.link_id uniquely identifies linkages between entities with a molecule.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The value of _pdbx_reference_entity_link.link_id uniquely identifies linkages between entities with a molecule.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The value of _pdbx_reference_entity_poly_link.link_id uniquely identifies a linkage within a polymer entity.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The value of _pdbx_reference_linked_entity_comp_link.link_id uniquely identifies linkages within the linked entity.

getLinkId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The value of _pdbx_reference_linked_entity_link.link_id uniquely identifies linkages within the linked entity.

getLinkToCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The component identifer for the component in the first partner of the example linkage.

getLinkToEntityType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The polymer linking type of the first partner entity in example linkage.

getLinkType() - Method in class org.rcsb.cif.schema.mm.EmDbReferenceAuxiliary

Type of auxiliary data stored at the indicated link.

getLipidMixture() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Description of the lipid mixture used for crystallization

getLipidProteinRatio() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

The molar ratio of lipid to protein in the crystallized sample

getListId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

This data item uniquely identifies a constituent of with the linked entity.

getListId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The value of _pdbx_reference_linked_entity_comp_link.list_id_1 is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.

getListId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The value of _pdbx_reference_linked_entity_comp_link.list_id_2 is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.

getLLDF() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

It is the Ligand Local Density Function defined as the (<RsR>_local - RsR_Ligand)/sigma_RsR, where <RsR>_local is the mean RSR of polymer residues in 5 Angstrom (including the crystallographic symmetry) surrounding the ligand, and sigma_RsR is sigma value calculated from the surrounding residues.

getLLGainRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The log-likelihood gain after rotation.

getLLGainTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The log-likelihood gain after translation.

getLoc() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.loc records lack of closure for MAD phasing.

getLoc() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.loc records lack of closure for MAD phasing.

getLoc() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.loc records lack of closure for MAD phasing.

getLoc() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The mean lack-of-closure error loc for reflections for this derivative in this shell.

getLoc() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean lack-of-closure error loc for reflections in this shell.

getLocAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.loc_acentric records lack of closure using acentric data for MAD phasing.

getLocAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.loc_acentric records lack of closure using acentric data for MAD phasing.

getLocAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.loc_acentric records lack of closure using acentric data for MAD phasing.

getLocale() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Return the locale used by this LinkedCaseInsensitiveMap.

getLocation() - Method in class org.rcsb.cif.schema.mm.Software

The URL for an Internet address at which details of the software can be found.

getLocCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.loc_centric records lack of closure using centric data for MAD phasing.

getLocCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.loc_centric records lack of closure using centric data for MAD phasing.

getLocCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.loc_centric records lack of closure using centric data for MAD phasing.

getLogPf() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

Log (base 10) protection factor.

getLogPfError() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

Error of Log (base 10) protection factor.

getLowerLimit() - Method in class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

The lower bond distance limit.

getLowResolution() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Low resolution limit for this shell (Angstroms)

getLpFactor() - Method in class org.rcsb.cif.schema.core.Refln

The Lorentz-polarization factor appropriate for the instrument used to measure the diffraction intensity.

getLsAbsStructureDetails() - Method in class org.rcsb.cif.schema.core.Refine

Details on the absolute structure and how it was determined.

getLsAbsStructureDetails() - Method in class org.rcsb.cif.schema.mm.Refine

The nature of the absolute structure and how it was determined.

getLsAbsStructureFlack() - Method in class org.rcsb.cif.schema.core.Refine

The measure of absolute structure as defined by Flack (1983).

getLsAbsStructureFlack() - Method in class org.rcsb.cif.schema.mm.Refine

The measure of absolute structure (enantiomorph or polarity) as defined by Flack (1983).

getLsAbsStructureFlackEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the The measure of absolute structure as defined by Flack (1983).

getLsAbsStructureFlackEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.ls_abs_structure_Flack.

getLsAbsStructureRogers() - Method in class org.rcsb.cif.schema.core.Refine

The measure of absolute structure as defined by Rogers (1981).

getLsAbsStructureRogers() - Method in class org.rcsb.cif.schema.mm.Refine

The measure of absolute structure (enantiomorph or polarity) as defined by Rogers.

getLsAbsStructureRogersEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the The measure of absolute structure as defined by Rogers (1981).

getLsAbsStructureRogersEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.ls_abs_structure_Rogers.

getLsDResHigh() - Method in class org.rcsb.cif.schema.core.Refine

Highest resolution for the reflections used in refinement.

getLsDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The highest resolution limit reported in the model file.

getLsDResHigh() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The highest resolution limit in calculating the metrics in this category.

getLsDResHigh() - Method in class org.rcsb.cif.schema.mm.Refine

The smallest value for the interplanar spacings for the reflection data used in the refinement in angstroms.

getLsDResHighSf() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The highest resolution limit calculated from the structure factor file.

getLsDResLow() - Method in class org.rcsb.cif.schema.core.Refine

Lowest resolution for the reflections used in refinement.

getLsDResLow() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The lowest resolution limit in calculating the metrics in this category.

getLsDResLow() - Method in class org.rcsb.cif.schema.mm.Refine

The largest value for the interplanar spacings for the reflection data used in the refinement in angstroms.

getLsDResLowSf() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The lowest resolution limit calculated from the structure factor file.

getLsExtinctionCoef() - Method in class org.rcsb.cif.schema.core.Refine

The extinction coefficient used to calculate the correction factor applied to the structure-factor data.

getLsExtinctionCoef() - Method in class org.rcsb.cif.schema.mm.Refine

The extinction coefficient used to calculate the correction factor applied to the structure-factor data.

getLsExtinctionCoefEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the extinction coefficient

getLsExtinctionCoefEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.ls_extinction_coef.

getLsExtinctionExpression() - Method in class org.rcsb.cif.schema.core.Refine

Description of or reference to the extinction-correction equation used to apply the data item _refine_ls.extinction_coef.

getLsExtinctionExpression() - Method in class org.rcsb.cif.schema.mm.Refine

A description of or reference to the extinction-correction equation used to apply the data item _refine.ls_extinction_coef.

getLsExtinctionMethod() - Method in class org.rcsb.cif.schema.core.Refine

Description of the extinction correction method applied with the data item _refine_ls.extinction_coef.

getLsExtinctionMethod() - Method in class org.rcsb.cif.schema.mm.Refine

A description of the extinction-correction method applied.

getLsGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getLsGoodnessOfFitAll() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S for all data after the final cycle of refinement.

getLsGoodnessOfFitAllEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for all reflections after the final cycle of refinement.

getLsGoodnessOfFitAllEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.ls_goodness_of_fit_all.

getLsGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for significantly intense reflections, (i.e.

getLsGoodnessOfFitGt() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S for significantly intense reflections (see _reflns.threshold_expression) after the final cycle of refinement.

getLsGoodnessOfFitGtEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for gt reflections after the final cycle of refinement.

getLsGoodnessOfFitObs() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for significantly intense reflections, (i.e.

getLsGoodnessOfFitObs() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S for reflection data classified as 'observed' (see _reflns.observed_criterion) after the final cycle of refinement.

getLsGoodnessOfFitObsEsd() - Method in class org.rcsb.cif.schema.core.Refine

Standard Uncertainty of the Least-squares goodness-of-fit parameter S for gt reflections after the final cycle of refinement.

getLsGoodnessOfFitObsEsd() - Method in class org.rcsb.cif.schema.mm.Refine

The standard uncertainty (estimated standard deviation) of _refine.ls_goodness_of_fit_obs.

getLsGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S for those reflections included in the final cycle of refinement.

getLsGoodnessOfFitRef() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S for all reflections included in the refinement after the final cycle of refinement.

getLsHydrogenTreatment() - Method in class org.rcsb.cif.schema.core.Refine

Code identifying how hydrogen atoms were treated in the refinement.

getLsHydrogenTreatment() - Method in class org.rcsb.cif.schema.mm.Refine

Treatment of hydrogen atoms in the least-squares refinement.

getLsMatrixType() - Method in class org.rcsb.cif.schema.core.Refine

Code identifying the matrix type used for least-squares derivatives.

getLsMatrixType() - Method in class org.rcsb.cif.schema.mm.Refine

Type of matrix used to accumulate the least-squares derivatives.

getLsNumberConstraints() - Method in class org.rcsb.cif.schema.core.Refine

Number of constrained (non-refined or dependent) parameters in the least-squares process.

getLsNumberConstraints() - Method in class org.rcsb.cif.schema.mm.Refine

The number of constrained (non-refined or dependent) parameters in the least-squares process.

getLsNumberParameters() - Method in class org.rcsb.cif.schema.core.Refine

Number of parameters refined in the least-squares process.

getLsNumberParameters() - Method in class org.rcsb.cif.schema.mm.Refine

The number of parameters refined in the least-squares process.

getLsNumberReflnsAll() - Method in class org.rcsb.cif.schema.core.Refine

Number of unique reflections used in the least-squares refinement.

getLsNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low.

getLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.core.Refine

The number of reflections that satisfy the resolution limits established by _refine_ls.d_res_high and _refine_ls.d_res_low and the observation limit established by _reflns.observed_criterion.

getLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The number of unique reflections (work+test sets).

getLsNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion.

getLsNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The number of reflections for the test set only.

getLsNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getLsNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getLsNumberRestraints() - Method in class org.rcsb.cif.schema.core.Refine

Number of restrained parameters in the least-squares refinement.

getLsNumberRestraints() - Method in class org.rcsb.cif.schema.mm.Refine

The number of restrained parameters.

getLsPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The percentage of unique reflections (work+test sets).

getLsPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, expressed as a percentage of the number of geometrically observable reflections that satisfy the resolution limits.

getLsPercentReflnsRFree() - Method in class org.rcsb.cif.schema.mm.Refine

The number of reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getLsRedundancyReflnsAll() - Method in class org.rcsb.cif.schema.mm.Refine

The ratio of the total number of observations of the reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low to the number of crystallographically unique reflections that satisfy the same limits.

getLsRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.Refine

The ratio of the total number of observations of the reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion to the number of crystallographically unique reflections that satisfy the same limits.

getLsRestrainedSAll() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S' for all reflections after the final cycle of least squares.

getLsRestrainedSAll() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S' for all reflections after the final cycle of least-squares refinement.

getLsRestrainedSObs() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S' for significantly intense reflections (satisfying _reflns.threshold_expression) after the final cycle of least squares.

getLsRestrainedSObs() - Method in class org.rcsb.cif.schema.mm.Refine

The least-squares goodness-of-fit parameter S' for reflection data classified as observed (see _reflns.observed_criterion) after the final cycle of least-squares refinement.

getLsRFactorAll() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getLsRFactorAll() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R for all reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low.

getLsRFactorGt() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor for the reflections judged significantly intense (see _reflns.number_gt and _reflns.threshold_expression) and included in the refinement.

getLsRFactorGt() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor for the reflections (with number given by _reflns.number_gt) judged significantly intense (i.e.

getLsRFactorObs() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor for the reflections judged significantly intense (see _reflns.number_gt and _reflns.threshold_expression) and included in the refinement.

getLsRFactorObs() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion.

getLsRFactorRAll() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The calculated Rfactor using all the data.

getLsRFactorRFree() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The calculated Rfree using the test set data.

getLsRFactorRFree() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getLsRFactorRFreeError() - Method in class org.rcsb.cif.schema.mm.Refine

The estimated error in _refine.ls_R_factor_R_free.

getLsRFactorRFreeErrorDetails() - Method in class org.rcsb.cif.schema.mm.Refine

Special aspects of the method used to estimated the error in _refine.ls_R_factor_R_free.

getLsRFactorRWork() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The calculated Rfactor using the working set data.

getLsRFactorRWork() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getLsRFsqdFactorObs() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor R(Fsqd), calculated on the squared amplitudes of the measured and calculated structure factors, for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getLsRFsqdFactorObs() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R(Fsqd) for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, calculated on the squares of the observed and calculated structure-factor amplitudes.

getLsRIFactorObs() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor R(I) for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getLsRIFactorObs() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R(I) for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, calculated on the estimated reflection intensities.

getLsShiftOverEsdMax() - Method in class org.rcsb.cif.schema.core.Refine

The largest ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getLsShiftOverEsdMax() - Method in class org.rcsb.cif.schema.mm.Refine

The largest ratio of the final least-squares parameter shift to the final standard uncertainty (estimated standard deviation).

getLsShiftOverEsdMean() - Method in class org.rcsb.cif.schema.core.Refine

The average ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getLsShiftOverEsdMean() - Method in class org.rcsb.cif.schema.mm.Refine

The average ratio of the final least-squares parameter shift to the final standard uncertainty (estimated standard deviation).

getLsShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.Refine

The largest ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getLsShiftOverSuMax() - Method in class org.rcsb.cif.schema.mm.Refine

The largest ratio of the final least-squares parameter shift to the final standard uncertainty.

getLsShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.Refine

Upper limit for the largest ratio of the final l-s parameter shift divided by the final standard uncertainty.

getLsShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.mm.Refine

An upper limit for the largest ratio of the final least-squares parameter shift to the final standard uncertainty.

getLsShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.Refine

The average ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getLsShiftOverSuMean() - Method in class org.rcsb.cif.schema.mm.Refine

The average ratio of the final least-squares parameter shift to the final standard uncertainty.

getLsShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.Refine

Upper limit for the average ratio of the final l-s parameter shift divided by the final standard uncertainty.

getLsShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.mm.Refine

An upper limit for the average ratio of the final least-squares parameter shift to the final standard uncertainty.

getLsStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.Refine

Structure-factor coefficient used in the least-squares process.

getLsStructureFactorCoef() - Method in class org.rcsb.cif.schema.mm.Refine

Structure-factor coefficient |F|, F^2^ or I used in the least- squares refinement process.

getLsWeightingDetails() - Method in class org.rcsb.cif.schema.core.Refine

Description of special aspects of the weighting scheme used in the least-squares refinement.

getLsWeightingDetails() - Method in class org.rcsb.cif.schema.mm.Refine

A description of special aspects of the weighting scheme used in least-squares refinement.

getLsWeightingScheme() - Method in class org.rcsb.cif.schema.core.Refine

General description of the weighting scheme used in the least-squares.

getLsWeightingScheme() - Method in class org.rcsb.cif.schema.mm.Refine

The weighting scheme applied in the least-squares process.

getLsWRFactorAll() - Method in class org.rcsb.cif.schema.core.Refine

Weighted residual factors for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getLsWRFactorAll() - Method in class org.rcsb.cif.schema.mm.Refine

Weighted residual factor wR for all reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low.

getLsWRFactorObs() - Method in class org.rcsb.cif.schema.core.Refine

Weighted residual factors for significantly intense reflections (satisfying _reflns.threshold_expression) included in the refinement.

getLsWRFactorObs() - Method in class org.rcsb.cif.schema.mm.Refine

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion.

getLsWRFactorRFree() - Method in class org.rcsb.cif.schema.mm.Refine

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getLsWRFactorRWork() - Method in class org.rcsb.cif.schema.mm.Refine

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getLuzzatiCoordinateErrorFree() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The estimated coordinate error obtained from the plot of the R value versus sin(theta)/lambda for the reflections treated as a test set during refinement.

getLuzzatiCoordinateErrorObs() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The estimated coordinate error obtained from the plot of the R value versus sin(theta)/lambda for reflections classified as observed.

getLuzzatiDResLowFree() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of the low-resolution cutoff used in constructing the Luzzati plot for reflections treated as a test set during refinement.

getLuzzatiDResLowObs() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of the low-resolution cutoff used in constructing the Luzzati plot for reflections classified as observed.

getLuzzatiSigmaAFree() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of sigma~a~ used in constructing the Luzzati plot for the reflections treated as a test set during refinement.

getLuzzatiSigmaAFreeDetails() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

Details of the estimation of sigma~a~ for the reflections treated as a test set during refinement.

getLuzzatiSigmaAObs() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of sigma~a~ used in constructing the Luzzati plot for reflections classified as observed.

getLuzzatiSigmaAObsDetails() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

Special aspects of the estimation of sigma~a~ for the reflections classified as observed.

getMacromoleculeDescription() - Method in class org.rcsb.cif.schema.mm.EmDepui

Indicates whether the authors are providing a macromolecule level description of their sample

getMagnetizationLinkageId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The magnetization linkage ID is used to designate dimensions of a multidimensional NMR experiment where the nuclei observed in the dimensions are directly linked by a one bond scalar coupling.

getMagnificationCalibration() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The magnification calibration method for the 3d reconstruction.

getMajorRadiusR() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

Major radius "R" of the torus.

getMajorRevision() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

The major version number of deposition release.

getMajorVersion() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

Major version number for this datablock.

getMake() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

The make, model or name of the diffraction radiation detector.

getMake() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Description of the make, model or name of the source device.

getManufacturer() - Method in class org.rcsb.cif.schema.mm.EmFiducialMarkers

Manufacturer source for the fiducial markers

getManufacturer() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

The name of the manufacturer of the spectrometer.

getManufacturer() - Method in class org.rcsb.cif.schema.mm.PdbxRobotSystem

The name of the manufacturer of the robotic system.

getManuscriptCreation() - Method in class org.rcsb.cif.schema.core.Publ

A description of the wordprocessor package and computer used to create the manuscript stored as _publ_manuscript.processed.

getManuscriptCreation() - Method in class org.rcsb.cif.schema.mm.Publ

A description of the word-processor package and computer used to create the word-processed manuscript stored as _publ.manuscript_processed.

getManuscriptProcessed() - Method in class org.rcsb.cif.schema.core.Publ

The full manuscript of a paper (excluding possibly the figures and the tables) output in ASCII characters from a word processor.

getManuscriptProcessed() - Method in class org.rcsb.cif.schema.mm.Publ

The full manuscript of a paper (excluding possibly the figures and the tables) output in ASCII characters from a word processor.

getManuscriptText() - Method in class org.rcsb.cif.schema.core.Publ

The full manuscript of a paper (excluding figures and possibly the tables) output as standard ASCII text.

getManuscriptText() - Method in class org.rcsb.cif.schema.mm.Publ

The full manuscript of a paper (excluding figures and possibly the tables) output as standard ASCII text.

getMapHoldDate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date of the embargo expiration for this map entry

getMapReleaseDate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date of map release for this entry

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.DeltaEncoding

getMapRepresentation() - Method in interface org.rcsb.cif.binary.encoding.Encoding

Converts this encoding to its map representation that can be serialized as BinaryCif.

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.FixedPointEncoding

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.RunLengthEncoding

getMapRepresentation() - Method in class org.rcsb.cif.binary.encoding.StringArrayEncoding

getMapSegmentFlag() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

A flag that indicates whether or not the 3DEM map is segmented i.e., whether the whole map is used or only a portion of it is used (by masking or by other means) as restraint in the modeling.

getMapType() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

Primary map or additional map classification.

getMarker() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The type of marker included to allow selection of transformed cells

getMask() - Method in class org.rcsb.cif.model.binary.BinaryColumn

getMask() - Method in class org.rcsb.cif.model.builder.ColumnBuilderImpl

getMask() - Method in interface org.rcsb.cif.model.ColumnBuilder

The registered mask data.

getMaskType() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.mask_type identifies the type of mask used for density modification

getMat11() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat11() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat11() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat12() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat12() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat12() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat13() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat13() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat13() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat21() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat21() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat21() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat22() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat22() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat22() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat23() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat23() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat23() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat31() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat31() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat31() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat32() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat32() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat32() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMat33() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat33() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMat33() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getMaterial() - Method in class org.rcsb.cif.schema.core.DiffrnAttenuator

Description of the material from which the attenuator is made.

getMaterial() - Method in class org.rcsb.cif.schema.mm.DiffrnAttenuator

Material from which the attenuator is made.

getMaterial() - Method in class org.rcsb.cif.schema.mm.EmEmbedding

The embedding material.

getMaterial() - Method in class org.rcsb.cif.schema.mm.EmShadowing

The material used in the shadowing.

getMaterial() - Method in class org.rcsb.cif.schema.mm.EmStaining

The staining material.

getMaterial() - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

The support material covering the em grid.

getMatrix() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMatrix() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getMatrix11() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix11() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix11() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix11() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix12() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix12() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix12() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix12() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix13() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix13() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix13() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix13() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix21() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix21() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix21() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix21() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix22() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix22() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix22() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix22() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix23() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix23() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix23() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix23() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix31() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix31() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix31() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix31() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix32() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix32() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix32() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix32() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrix33() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix33() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the 3x3 matrix component of the transformation operation.

getMatrix33() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the 3x3 matrix component of the transformation operation.

getMatrix33() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the 3x3 matrix component of a noncrystallographic symmetry operation.

getMatrixB() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

The symmetric anisotropic atomic displacement matrix B.

getMatrixFlag() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

A flag to indicate that the depositor has provided matrix records

getMatrixType() - Method in class org.rcsb.cif.schema.core.Refine

Code identifying the matrix type used for least-squares derivatives.

getMatrixType() - Method in class org.rcsb.cif.schema.core.RefineLs

Code identifying the matrix type used for least-squares derivatives.

getMatrixU() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

The symmetric anisotropic atomic displacement matrix U.

getMatthewCoeff() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The Matthew coefficient.

getMaximumDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The maximum distance constraint violation for the ensemble.

getMaximumLowerDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The maximum lower distance constraint violation for the ensemble.

getMaximumTorsionAngleConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The maximum torsion angle constraint violation for the ensemble.

getMaximumUpperDistanceConstraintViolation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The maximum upper distance constraint violation for the ensemble.

getMaxMeanCrossSectionalRadiiGyration() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The maximum mean radius of structural elongation of the sample.

getMaxMeanCrossSectionalRadiiGyrationEsd() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The estimated standard deviation for the minimum mean radius of structural elongation of the sample.

getMaxtorsion() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The maximum torsion value sigma-m, c1_c2_c3_c4/cos(P) of this monomer.

getMDF() - Method in class org.rcsb.cif.schema.core.Database

Code assigned in the Metals Data File.

getMDF() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned in the Metals Data File.

getMeanBAll() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The mean value of the isotropic displacement parameter for all atoms in the monomer.

getMeanBAll() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The mean value of the isotropic displacement parameter for all atoms in the monomer.

getMeanBBase() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The mean value of the isotropic displacement parameter for atoms in the base moiety of the nucleic acid monomer.

getMeanBMain() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The mean value of the isotropic displacement parameter for atoms in the main chain of the monomer.

getMeanBPhos() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The mean value of the isotropic displacement parameter for atoms in the phosphate moiety of the nucleic acid monomer.

getMeanBSide() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The mean value of the isotropic displacement parameter for atoms in the side chain of the monomer.

getMeanBSugar() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The mean value of the isotropic displacement parameter for atoms in the sugar moiety of the nucleic acid monomer.

getMeanCartnX() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The mean Cartesian X component corresponding to this gaussian object.

getMeanCartnX() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The mean Cartesian X component corresponding to this gaussian object.

getMeanCartnY() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The mean Cartesian Y component corresponding to this gaussian object.

getMeanCartnY() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The mean Cartesian Y component corresponding to this gaussian object.

getMeanCartnZ() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The mean Cartesian Z component corresponding to this gaussian object.

getMeanCartnZ() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The mean Cartesian Z component corresponding to this gaussian object.

getMeanE21Abs() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <|E^2 - 1|> calculated by Xtriage using acentric reflections.(untwinned: 0.736; perfect twin 0.541).

getMeanFom() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The mean figure of merit.

getMeanFSquareOverMeanF2() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <F>^2/<F^2> calculated by Xtriage using acentric reflections.(untwinned: 0.785; perfect twin 0.885).

getMeanFSquareOverMeanF2() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The ideal statistics for twinned crystals.

getMeanGuinerRadius() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The mean radius of structural elongation of the sample.

getMeanGuinerRadiusEsd() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The estimated standard deviation for the mean radius of structural elongation of the sample.

getMeanI2OverMeanISquare() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <I^2>/<I>^2 calculated by Xtriage using acentric reflections.(untwinned: 2.000; perfect twin 1.500).

getMeanI2OverMeanISquare() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The ideal statistics for twinned crystals.

getMeanIOverSigIAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity in a shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverSigIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The ratio of the mean of the intensities of all reflections in this shell to the mean of the standard uncertainties of the intensities of all reflections in this shell.

getMeanIOverSigIGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity of significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverSigIGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The ratio of the mean of the intensities of the significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean of the standard uncertainties of the intensities of the significantly intense reflections in this shell.

getMeanIOverSigIObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity of significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverSigIObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The ratio of the mean of the intensities of the reflections classified as 'observed' (see _reflns.observed_criterion) in this shell to the mean of the standard uncertainties of the intensities of the 'observed' reflections in this shell.

getMeanIOverSuIAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity in a shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverSuIGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity of significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverUIAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity in a shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverUIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The ratio of the mean of the intensities of all reflections in this shell to the mean of the standard uncertainties of the intensities of all reflections in this shell.

getMeanIOverUIGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Ratio of the mean intensity of significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean standard uncertainty of the intensities in the shell.

getMeanIOverUIGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The ratio of the mean of the intensities of the significantly intense reflections (see _reflns.threshold_expression) in this shell to the mean of the standard uncertainties of the intensities of the significantly intense reflections in this shell.

getMeanPathLengthTbar() - Method in class org.rcsb.cif.schema.core.Refln

Mean path length through the crystal for this diffraction vector.

getMeanPathLengthTbar() - Method in class org.rcsb.cif.schema.mm.Refln

Mean path length in millimetres through the crystal for this reflection.

getMeanPhase() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean of the phase values for all reflections in this shell.

getMeasF() - Method in class org.rcsb.cif.schema.core.ReflnsScale

Structure factor scale for this scale group.

getMeasF() - Method in class org.rcsb.cif.schema.mm.ReflnsScale

A scale associated with _reflns_scale.group_code.

getMeasFSquared() - Method in class org.rcsb.cif.schema.core.ReflnsScale

Structure factor squared scale for this scale group.

getMeasFSquared() - Method in class org.rcsb.cif.schema.mm.ReflnsScale

A scale associated with _reflns_scale.group_code.

getMeasIntensity() - Method in class org.rcsb.cif.schema.core.ReflnsScale

Net intensity scale for this scale group.

getMeasIntensity() - Method in class org.rcsb.cif.schema.mm.ReflnsScale

A scale associated with _reflns_scale.group_code.

getMeasuredFractionThetaFull() - Method in class org.rcsb.cif.schema.core.Diffrn

Fraction of unique (symmetry-independent) reflections measured out to _diffrn_reflns.theta_full.

getMeasuredFractionThetaMax() - Method in class org.rcsb.cif.schema.core.Diffrn

Fraction of unique (symmetry-independent) reflections measured out to _diffrn_reflns.theta_max.

getMeasurementDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

Description of special aspects of the diffraction measurement.

getMeasurementDeviceClass() - Method in class org.rcsb.cif.schema.core.Diffrn

Type of goniometer device used to mount and orient the specimen.

getMeasurementDeviceDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

Details of the goniometer device used in the diffraction experiment.

getMeasurementDeviceMake() - Method in class org.rcsb.cif.schema.core.Diffrn

The make, model or name of the goniometer device used.

getMeasurementMethod() - Method in class org.rcsb.cif.schema.core.Diffrn

Description of scan method used to measure diffraction intensities.

getMeasurementSpecimenSupport() - Method in class org.rcsb.cif.schema.core.Diffrn

Mounting method for the crystal specimum during data collection.

getMedianDistance() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

The median distance between the crosslinked residues in the sampled models.

getMeltingPoint() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature at which a crystalline solid changes to a liquid.

getMeltingPoint() - Method in class org.rcsb.cif.schema.mm.Chemical

The temperature in kelvins at which the crystalline solid changes to a liquid.

getMeltingPointGt() - Method in class org.rcsb.cif.schema.core.Chemical

A temperature above which the melting point lies.

getMeltingPointGt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins above which the melting point (the temperature at which the crystalline solid changes to a liquid) lies.

getMeltingPointLt() - Method in class org.rcsb.cif.schema.core.Chemical

A temperature below which the melting point lies.

getMeltingPointLt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins below which the melting point (the temperature at which the crystalline solid changes to a liquid) lies.

getMergedFail() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that merging of new coordinates has failed.

getMergeOutputModelFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

For the last model merge operation, the name of the model file containing output from the merge operation.

getMergePriorModelFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

For the last model merge operation, the name of the model file containing prior data for the current deposition session.

getMergeReplaceModelFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

For the last model merge operation, the name of the model file containing user provided replacement coordinate and model data.

getMessage() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The text of the message.

getMessageId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

This is an unique and sequential identifier for a message.

getMessageId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The internal identifier assigned to each message.

getMessageId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The internal identifier assigned to each message.

getMessageSubject() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The subject text of the message.

getMessageText() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The body of the message.

getMessageType() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

Defines how the message was sent or received.

getMessageType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The message type.

getMetadataReference() - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

A DOI reference to the metadata decribing the related data set.

getMethod() - Method in class org.rcsb.cif.schema.core.Diffrn

Description of scan method used to measure diffraction intensities.

getMethod() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Description of scan method used to measure diffraction intensities.

getMethod() - Method in class org.rcsb.cif.schema.core.Exptl

The method used in the experiment.

getMethod() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

Method used to measure intensities.

getMethod() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

The method used for selecting observed assemblies.

getMethod() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The method used to fit atomic coordinates into the 3dem reconstructed map.

getMethod() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The algorithm method used for the 3d-reconstruction.

getMethod() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

The method used to determine the molecular weight.

getMethod() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

The method used for selecting particles

getMethod() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

A description of the method used to produce the support film.

getMethod() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The procedure for vitrification.

getMethod() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

The method used for selecting volumes.

getMethod() - Method in class org.rcsb.cif.schema.mm.Exptl

The method used in the experiment.

getMethod() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The method used to grow the crystals.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

The method used for protein characterisation.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

This item describes the method of fractionation.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The lysis method.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRefine

The method used to determine the structure.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.method identifies the method used for density modification

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The method by which the TLS parameters were obtained.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDelivery

The description of the mechanism by which the specimen in placed in the path of the source.

getMethod() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A description of the methods used in the modelling

getMethod() - Method in class org.rcsb.cif.schema.mm.Phasing

A listing of the method or methods used to phase this structure.

getMethod() - Method in class org.rcsb.cif.schema.mm.PhasingAveraging

A description of the phase-averaging phasing method used to phase this structure.

getMethod() - Method in class org.rcsb.cif.schema.mm.PhasingIsomorphous

A description of the isomorphous-phasing method used to phase this structure.

getMethod() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

A description of the MAD phasing method used to phase this structure.

getMethod() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

A description of the MIR phasing method applied to phase this structure.

getMethodDetails() - Method in class org.rcsb.cif.schema.core.Exptl

A description of special aspects of the experimental method.

getMethodDetails() - Method in class org.rcsb.cif.schema.mm.Exptl

A description of special aspects of the experimental method.

getMethodDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

Provides details of the method used to determine or compute the assembly.

getMethodDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

Provides details of the method used to determine or compute the assembly.

getMethodRef() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

A literature reference that describes the method used to grow the crystals.

getMethodRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.method_rotation identifies the method used for rotation search.

getMethodsDevelopmentCategory() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The methods development category in which this entry has been placed.

getMethodTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.method_translation identifies the method used for translation search.

getMetricTensor() - Method in class org.rcsb.cif.schema.core.Cell

The direct space (covariant) metric tensor used to transform vectors and coordinates from real (direct) to reciprocal space.

getMFo_DFc_3sigmaNegative() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of electron density negative peaks less than 3 sigma.

getMFo_DFc_3sigmaPositive() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of electron density positive peaks larger than 3 sigma.

getMFo_DFc_6sigmaNegative() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of electron density negative peaks less than 6 sigma.

getMFo_DFc_6sigmaPositive() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of electron density positive peaks larger than 6 sigma.

getMicroscopeId() - Method in class org.rcsb.cif.schema.mm.EmImaging

This data item is a pointer to _em_microscope.id in the EM_MICROSCOPE category.

getMicroscopeModel() - Method in class org.rcsb.cif.schema.mm.EmImaging

The name of the model of microscope.

getMicValue() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The value of the Maximal Information Co-efficient (MIC), if applicable.

getMinMeanCrossSectionalRadiiGyration() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The minimum mean radius of structural elongation of the sample.

getMinMeanCrossSectionalRadiiGyrationEsd() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The estimated standard deviation for the minimum mean radius of structural elongation of the sample.

getMinorRadiusR() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

Minor radius "r" of the torus.

getMinorRevision() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

The minor version number of deposition release.

getMinorVersion() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

Minor version identifier for this datablock: The minor version is incremented for each datablock revision.

getMode() - Method in class org.rcsb.cif.schema.mm.EmDetector

The detector mode used during image recording.

getMode() - Method in class org.rcsb.cif.schema.mm.EmImaging

The mode of imaging.

getModel() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Items in the MODEL Category specify data for the crystal structure postulated and modelled from the atomic coordinates derived and refined from the diffraction information.

getModel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

The model of the NMR spectrometer.

getModel() - Method in class org.rcsb.cif.schema.mm.PdbxRobotSystem

The model of the robotic system.

getModelCartnX() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The x component of the coordinates for this atom in this component specified as orthogonal angstroms.

getModelCartnX() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The x component of the coordinates for this atom in this component model specified as orthogonal angstroms.

getModelCartnXEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The standard uncertainty (estimated standard deviation) of _chem_comp_atom.model_Cartn_x.

getModelCartnY() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The y component of the coordinates for this atom in this component specified as orthogonal angstroms.

getModelCartnY() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The y component of the coordinates for this atom in this component model specified as orthogonal angstroms.

getModelCartnYEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The standard uncertainty (estimated standard deviation) of _chem_comp_atom.model_Cartn_y.

getModelCartnZ() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The z component of the coordinates for this atom in this component specified as orthogonal angstroms.

getModelCartnZ() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The z component of the coordinates for this atom in this component model specified as orthogonal angstroms.

getModelCartnZEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The standard uncertainty (estimated standard deviation) of _chem_comp_atom.model_Cartn_z.

getModelDetails() - Method in class org.rcsb.cif.schema.mm.ChemComp

A description of special aspects of the generation of the coordinates for the model of the component.

getModelDetails() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.model_details records the details of model used.

getModelErf() - Method in class org.rcsb.cif.schema.mm.ChemComp

A pointer to an external reference file from which the atomic description of the component is taken.

getModelGranularity() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The coarse-graining information for the crosslink implementation.

getModelGranularity() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The level of detail at which model primitive objects are applied to the structure.

getModelGranularity() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The granularity of the predicted contact as applied to the multi-scale model.

getModelGroupId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

An identifier for the cluster or group of models being deposited.

getModelGroupId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

The model group identifier corresponding to the sub sample, if applicable.

getModelGroupId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentative

The model group identifier corresponding to the representative model.

getModelGroupId() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModelGroupLink

An identifier for the structural model group.

getModelGroupIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

The model group id corresponding to the node at the origin of directed edge.

getModelGroupIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

The model group id corresponding to the node at the end of the directed edge.

getModelId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

The model number corresponding to the 2DEM fitting result presented.

getModelId() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

The model number corresponding to the 3DEM fitting result presented.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

The identifier to the model that the pseudo site corresponds to.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

The model number corresponding to the cross link result presented.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

The model number corresponding to the EPR fitting result presented.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The model id corresponding to the gaussian object.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmModelGroupLink

An identifier for the structural model.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmModelList

A unique identifier for the structural model being deposited.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentative

The model identifier corresponding to the representative model.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

An identifier for the structural model.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

The model number corresponding to the SAS fitting result presented.

getModelId() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The model id corresponding to the sphere object.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL category.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL category.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL category.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelDescriptor

This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL category.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelFeature

The component model identifier for this feature.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelReference

The component model identifier for this feature.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The component model identifier for this analysis.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The component model identifier for this analysis.

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

The model number for the given residue

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

The model number for the given residue

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

The model number for the given residue

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

The model number

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

The model number for the given angle

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The model number

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxValAngle

The model number for the given angle

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxValBond

The model number for the given bond

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxValChiral

The model number for the given residue

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxValContact

The model number for the given angle

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

The model number for the given angle

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The model number for the given angle

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The model number for the given bond

getModelId() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The model number for the given angle

getModelMode() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The manner in which the segment is modeled.

getModelName() - Method in class org.rcsb.cif.schema.mm.IhmModelList

A decsriptive name for the model.

getModelNumber() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Describes the model number of the the base pair.

getModelNumber() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

Describes the model number of the the base pair step.

getModelObjectCount() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The number of primitive objects used to model a feature in the case of 'by-feature' granularity.

getModelObjectPrimitive() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The primitive object used to model this segment.

getModelSite() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe atomic sites and connections in the proposed atomic model.

getModelSource() - Method in class org.rcsb.cif.schema.mm.ChemComp

The source of the coordinates for the model of the component.

getModification() - Method in class org.rcsb.cif.schema.mm.PdbxConnectModification

Type of modification

getModificationFlag() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

A flag to indicate whether the residue is chemically modified or not.

getModified() - Method in class org.rcsb.cif.schema.mm.PdbxConnectType

Indicates a modified chemical component.

getModifiedDate() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Date of last modification.

getModResChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

An identifier to the chemical descriptor of the modified residue, if applicable.

getMods() - Method in class org.rcsb.cif.schema.mm.Software

Any noteworthy modifications to the base software, if applicable.

getModType() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

A code taken from the REVDAT record classifying common types of entry revisions.

getMoiety() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Formula with each discrete bonded residue or ion shown as a separate moiety.

getMoiety() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

Formula with each discrete bonded residue or ion shown as a separate moiety.

getMolCommonName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Common name or abbreviation used in the literature for the molecule used as a chemical shift reference.

getMolecularDescriptionFlag() - Method in class org.rcsb.cif.schema.mm.EmDepositorInfo

Records whether molecular/polymer entities of the EM sample will be described.

getMolecularGraphics() - Method in class org.rcsb.cif.schema.core.Computing

Brief description of software used for molecular graphics.

getMolecularGraphics() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for molecular graphics.

getMoleIndex() - Method in class org.rcsb.cif.schema.core.ModelSite

Index number of a distinct molecules in the cell, not related by symmetry.

getMolWtExp() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The value (in megadaltons) of the experimentally determined molecular weight of the assembly.

getMolWtMethod() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The method used to determine the molecular weight.

getMolWtTheo() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The value (in megadaltons) of the theoretically determined molecular weight of the assembly.

getMonId() - Method in class org.rcsb.cif.schema.mm.EntityPolySeq

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

getMonId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.label_comp_id in the PDBX_ENTITY_BRANCH_LIST category.

getMonId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

Pointer to _atom_site.label_comp_id.

getMonId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Pointer to _entity_poly_seq.mon_id.

getMonId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

This data item is the chemical component identifier of monomer.

getMonId() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

The monomer type found at this position in the sequence of the entity or biological unit described in this data block.

getMonNstdClass() - Method in class org.rcsb.cif.schema.mm.ChemComp

A description of the class of a nonstandard monomer if the nonstandard monomer represents a modification of a standard monomer.

getMonNstdDetails() - Method in class org.rcsb.cif.schema.mm.ChemComp

A description of special details of a nonstandard monomer.

getMonNstdFlag() - Method in class org.rcsb.cif.schema.mm.ChemComp

'yes' indicates that this is a 'standard' monomer, 'no' indicates that it is 'nonstandard'.

getMonNstdParent() - Method in class org.rcsb.cif.schema.mm.ChemComp

The name of the parent monomer of the nonstandard monomer, if the nonstandard monomer represents a modification of a standard monomer.

getMonNstdParentCompId() - Method in class org.rcsb.cif.schema.mm.ChemComp

The identifier for the parent component of the nonstandard component.

getMonochromator() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Description of the method used to obtain monochromatic radiation.

getMonochromator() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The method used to obtain monochromatic radiation.

getMosaicity() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell mosaicity.

getMotionControl() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Device used to control movement of the fixed sample

getMsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructMsymGen

Uniquely identifies the this structure instance in point symmetry unit.

getMtrixNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Number of matrix for the NCS groups used in refinement.

getMultiplicity() - Method in class org.rcsb.cif.schema.core.GeomBond

The number of times the given bond appears in the environment of the atoms labelled _geom_bond.atom_site_label_1.

getMultiplicity() - Method in class org.rcsb.cif.schema.core.SpaceGroup

Number of unique symmetry elements in the space group.

getMultiplicity() - Method in class org.rcsb.cif.schema.core.SpaceGroupWyckoff

The multiplicity of this Wyckoff position as given in International Tables Volume A.

getMultiplicity() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Multiplicity (average number of measurements) for the structure factors in this resolution shell

getMultiplicityOfInfection() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The multiplicity of infection for genes introduced by transfection, eg.

getMultiScaleFlag() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A flag to indicate if the modeling is multi scale.

getMultiStateFlag() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A flag to indicate if the modeling is multi state.

getMutantFlag() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

mutant flag

getMutationFlag() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

A flag to indicate whether the residue has an engineered mutation or not.

getMutResChemCompId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

The chemical component identifier of the mutated residue, if applicable.

getN1C2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The n1_c2 covalent element of this monomer.

getN1C6() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The n1_c6 covalent element of this monomer.

getN9C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The n9_c4 covalent element of this monomer.

getN9C8() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The n9_c8 covalent element of this monomer.

getNAAlpha_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid alpha-angle constraints used in the final structure calculation.

getNABeta_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid beta-angle constraints used in the final structure calculation.

getNAChi_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid chi-angle constraints used in the final structure calculation.

getNADelta_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid delta-angle constraints used in the final structure calculation.

getNAEpsilon_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid epsilon-angle constraints used in the final structure calculation.

getNAGamma_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid gamma-angle constraints used in the final structure calculation.

getName() - Method in class org.rcsb.cif.schema.core.AuditAuthor

The name of an author of this data block.

getName() - Method in class org.rcsb.cif.schema.core.AuditContactAuthor

The name of the author of the data block to whom correspondence should be addressed.

getName() - Method in class org.rcsb.cif.schema.core.CitationAuthor

Name of citation author; relevant for articles and book chapters.

getName() - Method in class org.rcsb.cif.schema.core.CitationEditor

Name of citation editor; relevant for book chapters.

getName() - Method in class org.rcsb.cif.schema.core.Journal

The name of the coeditor.

getName() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The name of the coeditor.

getName() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Name of the technical editor for this publication.

getName() - Method in class org.rcsb.cif.schema.core.Publ

The name of the author(s) submitting the manuscript and data block.

getName() - Method in class org.rcsb.cif.schema.core.PublAuthor

The name of a publication author.

getName() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

The name of the author(s) submitting the manuscript and data block.

getName() - Method in class org.rcsb.cif.schema.mm.AuditAuthor

The name of an author of this data block.

getName() - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

The name of the author of the data block to whom correspondence should be addressed.

getName() - Method in class org.rcsb.cif.schema.mm.ChemComp

The full name of the component.

getName() - Method in class org.rcsb.cif.schema.mm.CitationAuthor

Name of an author of the citation; relevant for journal articles, books and book chapters.

getName() - Method in class org.rcsb.cif.schema.mm.CitationEditor

Names of an editor of the citation; relevant for books and book chapters.

getName() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The name of the assembly of observed complexes.

getName() - Method in class org.rcsb.cif.schema.mm.EmBuffer

The name of the buffer.

getName() - Method in class org.rcsb.cif.schema.mm.EmBufferComponent

name of the buffer component

getName() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

Name of this component in the observed assembly.

getName() - Method in class org.rcsb.cif.schema.mm.EmSoftware

The name of the software package used, e.g., RELION.

getName() - Method in class org.rcsb.cif.schema.mm.EmVirusShell

The name for this virus shell.

getName() - Method in class org.rcsb.cif.schema.mm.EntityNameCom

A common name for the entity.

getName() - Method in class org.rcsb.cif.schema.mm.EntityNameSys

The systematic name for the entity.

getName() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

A common name for the component of the solution.

getName() - Method in class org.rcsb.cif.schema.mm.IhmDatasetGroup

A name for the dataset group.

getName() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

A name for the ensemble sub sample.

getName() - Method in class org.rcsb.cif.schema.mm.IhmModelGroup

A name for the collection of models.

getName() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentation

Name/brief description for the model representation.

getName() - Method in class org.rcsb.cif.schema.mm.IhmStructAssembly

A name for the structural assembly.

getName() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

A user provided name for the class.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxAuditAuthor

The name of an author of this data block.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxBuffer

The name of each buffer.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The name of each buffer component.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

The chemical name of the component.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

The synonym of this particular chemical component.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

_pdbx_construct.name provides a placeholder for the local name of the construct, for example the plasmid name if this category is used to list plasmids.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The name and type of detector.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

Common name of drug.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxEntityName

Entity name.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds an entity name.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomy

This data item holds an entity name or synonym.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNonpoly

A name for the non-polymer entity

getName() - Method in class org.rcsb.cif.schema.mm.PdbxInhibitorInfo

Name of inhibitor.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxIonInfo

Name of ion.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

A name of the molecule.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

A name of the molecule.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

A name of the molecule.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

The name of the software used for the task.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

A label that uniquely identifies the NMR spectrometer from other spectrometers listed in the entry.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxProteinInfo

Name of protein.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

A name of the non-polymer entity.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The name of the linked entity example.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

The name of the constituent withing the linked entity.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

A name of the entity.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

The entity family name.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The chemical name for the structure entry in the related database

getName() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

A synonym name for the entity.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxSolventInfo

Name of solvent.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

The name of the group.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

A descriptive name for the transformation operation.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

A descriptive name for the transformation operation.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

A descriptive name for the transformation operation.

getName() - Method in class org.rcsb.cif.schema.mm.PdbxTrnaInfo

Name of trna.

getName() - Method in class org.rcsb.cif.schema.mm.PublAuthor

The name of a publication author.

getName() - Method in class org.rcsb.cif.schema.mm.Software

The name of the software.

getNameCommon() - Method in class org.rcsb.cif.schema.core.Chemical

Trivial name by which the compound is commonly known.

getNameCommon() - Method in class org.rcsb.cif.schema.mm.Chemical

Trivial name by which the compound is commonly known.

getNameDepositor() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The last name of the depositor to be used in correspondance.

getNameFirst() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The first name of the author of the data block to whom correspondence should be addressed.

getNameFull() - Method in class org.rcsb.cif.schema.core.Journal

Full name of the journal.

getNameFull() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getNameH_MAlt() - Method in class org.rcsb.cif.schema.core.SpaceGroup

_space_group.name_H-M_alt allows for any Hermann-Mauguin symbol to be given.

getNameH_MAlt() - Method in class org.rcsb.cif.schema.mm.SpaceGroup

_space_group.name_H-M_alt allows any Hermann-Mauguin symbol to be given.

getNameH_MAltDescription() - Method in class org.rcsb.cif.schema.core.SpaceGroup

A free-text description of the code appearing in _space_group.name_H-M_alt.

getNameH_MFull() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The full international Hermann-Mauguin space-group symbol as defined in Section 2.2.3 and given as the second item of the second line of each of the space-group tables of Part 7 of International Tables for Crystallography Volume A (2002).

getNameH_MRef() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The short international Hermann-Mauguin space-group symbol as defined in Section 2.2.3 and given as the first item of each space-group table in Part 7 of International Tables for Crystallography Volume A (2002).

getNameHall() - Method in class org.rcsb.cif.schema.core.SpaceGroup

Space group symbol defined by Hall.

getNameHall() - Method in class org.rcsb.cif.schema.mm.SpaceGroup

Space-group symbol defined by Hall.

getNameLast() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The last name of the author of the data block to whom correspondence should be addressed.

getNameMi() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The middle initial(s) of the author of the data block to whom correspondence should be addressed.

getNameMineral() - Method in class org.rcsb.cif.schema.core.Chemical

Mineral name accepted by the International Mineralogical Association.

getNameMineral() - Method in class org.rcsb.cif.schema.mm.Chemical

Mineral name accepted by the International Mineralogical Association.

getNameSalutation() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The salutation of the author of the data block to whom correspondence should be addressed.

getNameSchoenflies() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The Schoenflies symbol as listed in International Tables for Crystallography Volume A denoting the proper affine class (i.e.

getNameStructureType() - Method in class org.rcsb.cif.schema.core.Chemical

Commonly used structure-type name.

getNameStructureType() - Method in class org.rcsb.cif.schema.mm.Chemical

Commonly used structure-type name.

getNameSystematic() - Method in class org.rcsb.cif.schema.core.Chemical

IUPAC or Chemical Abstracts full name of compound.

getNameSystematic() - Method in class org.rcsb.cif.schema.mm.Chemical

IUPAC or Chemical Abstracts full name of the compound.

getNameType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityName

Entity name type.

getNameType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomy

This data item classifies the entity name within a taxonomic node.

getNAOther_angleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid other-angle constraints used in the final structure calculation.

getNASugarPuckerConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of nucleic acid sugar pucker constraints used in the final structure calculation.

getNativeSetId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The data set that was treated as the native in this experiment.

getNativeSetId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The data set that was treated as the native in this experiment.

getNBS() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the NBS (NIST) Crystal Data Database.

getNBS() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by the NBS (NIST) Crystal Data Database.

getNCA() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

Total number of connected atoms excluding terminal hydrogen atoms.

getNCA() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The number of connected atoms excluding terminal hydrogen atoms.

getNcbiTaxid() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceAnnotation

NCBI TaxID

getNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The NCBI taxonomy id for the natural organism source of the component.

getNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

The NCBI taxonomy id of the expression host used to produce the component.

getNcbiTaxId() - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

The NCBI taxonomy of the host species from which the virus was isolated.

getNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

NCBI Taxonomy identifier of the organism from which the sequence of the synthetic entity was derived.

getNcsGroupNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Number of NCS groups used in refinement.

getNcsModelDetails() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

Special aspects of the manner in which noncrystallographic restraints were applied to atomic parameters in the domain specified by _refine_ls_restr_ncs.dom_id and equivalent atomic parameters in the domains against which it was restrained.

getNdbOriginalNdbCoordinates() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Placeholder category for PDB coordinate data.

getNdbSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

NDB/RCSB residue number.

getNdbSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

NDB residue number.

getNdbStructConfNa() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the NDB_STRUCT_CONF_NA category describes secondary structure features in this entry.

getNdbStructFeatureNa() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the NDB_STRUCT_FEATURE_NA category describes tertiary and other special structural features in this entry.

getNdbStructNaBasePair() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the NDB_STRUCT_NA_BASE_PAIR category record details of base pairing interactions.

getNdbStructNaBasePairStep() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the NDB_STRUCT_NA_BASE_PAIR_STEP category record details of base pair step interactions.

getNdbTid() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Temporary NDB ID.

getNdbTokenType() - Method in class org.rcsb.cif.schema.mm.PdbxConnectType

Internal chemical type identifier used by NDB.

getNeighborCompId3prime() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

Neighbor component in the 3' direction.

getNeighborCompId5prime() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

Neighbor component in the 5' direction.

getNeighborLigandDistance() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Distance to closest neighboring ligand or solvent atom.

getNeighborMacromoleculeDistance() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Distance to closest neighboring macromolecule atom.

getNextC3O3PO5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_c3_o3_p_o5 covalent element of this monomer.

getNextC4C3O3P() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_c4_c3_o3_p covalent element of this monomer.

getNextC4O4C1N19() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_c4_o4_c1_n1_9 covalent element of this monomer.

getNextC5C4C3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_c5_c4_c3_o3 covalent element of this monomer.

getNextLabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_label_comp_id covalent element of this monomer.

getNextLabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_label_seq_id covalent element of this monomer.

getNextO3PO5C5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_o3_p_o5_c5 covalent element of this monomer.

getNextO4C1N19C24() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_o4_c1_n1_9_c2_4 covalent element of this monomer.

getNextO5C5C4C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_o5_c5_c4_c3 covalent element of this monomer.

getNextPO5C5C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The next_p_o5_c5_c4 covalent element of this monomer.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

This item unique identifier for the next production step.

getNextStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item unique identifier for the next production step.

getNH() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

Total number of hydrogen atoms attached to this atom, regardless of whether they are included in the refinement or the atom_site list.

getNH() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The total number of hydrogen atoms attached to this atom, regardless of whether they are included in the refinement or the ATOM_SITE list.

getNitrogenShiftsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A value indicating if 15N chemical shifts are being deposited and if IUPAC chemical shift referencing was used.

getNOEConstraintsTotal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of all NOE constraints used in the final structure calculation.

getNOEInterentityTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of interentity, NOE constraints used in the final structure calculation.

getNOEInterprotonDistanceEvaluation() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

Describe the method used to quantify the NOE and ROE values.

getNOEIntraresidueTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of all intraresidue, [i-j]=0, NOE constraints used in the final structure calculation.

getNOELongRangeTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of long range [i-j]>5 NOE constraints used in the final structure calculation.

getNOEMediumRangeTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of medium range 1<[i-j]<=5 NOE constraints used in the final structure calculation.

getNOEMotionalAveragingCorrection() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

Describe any corrections that were made to the NOE data for motional averaging.

getNOEPseudoatomCorrections() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

Describe any corrections made for pseudoatoms

getNOESequentialTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of sequential, [i-j]=1, NOE constraints used in the final structure calculation.

getNominalCs() - Method in class org.rcsb.cif.schema.mm.EmImaging

The spherical aberration coefficient (Cs) in millimeters, of the objective lens.

getNominalDefocusMax() - Method in class org.rcsb.cif.schema.mm.EmImaging

The maximum defocus value of the objective lens (in nanometers) used to obtain the recorded images.

getNominalDefocusMin() - Method in class org.rcsb.cif.schema.mm.EmImaging

The minimum defocus value of the objective lens (in nanometers) used to obtain the recorded images.

getNominalMagnification() - Method in class org.rcsb.cif.schema.mm.EmImaging

The magnification indicated by the microscope readout.

getNominalPixelSize() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The nominal pixel size of the projection set of images.

getNon_bondedInterConfDbPotentialTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The force constant used for the non-bonded interaction conformational database potential term employed in the target function used for simulated annealing.

getNon_bondedInterRadiusOfGyrationTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The force constant used for the non-bonded interaction radius of gyration term employed in the target function used for simulated annealing.

getNon_bondedInterRadiusOfGyrationTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the radius of gyration term.

getNon_bondedInterVanDerWaalsTerm() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The force constant used for the non-bonded interaction van der Waals term employed in the target function used for simulated annealing.

getNon_bondedInterVanDerWaalsTermType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The type of van der Waals term employed in the target function used for simulated annealing.

getNon_bondedInterVanDerWaalsTermUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

The units for the force constant for the van der Waals term.

getNon_bondedRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall on-bonded distance (all atoms).

getNonpolymerDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

Additional details about the non-polymer components in this entry.

getNonpolyResNum1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The residue number for the first of two entities containing the linkage.

getNonpolyResNum2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The residue number for the second of two entities containing the linkage.

getNotes() - Method in class org.rcsb.cif.schema.core.Journal

Notes on coeditor interaction wrt this publication.

getNotes() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

Notes on coeditor interaction wrt this publication.

getNotes() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Notes of the technical editor for this publication.

getNRPFlag() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

A flag to indicate a non-ribosomal entity.

getNstdChirality() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A flag to indicate whether the polymer contains at least one monomer unit with chirality different from that specified in _entity_poly.type.

getNstdLinkage() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A flag to indicate whether the polymer contains at least one monomer-to-monomer link different from that implied by _entity_poly.type.

getNstdMonomer() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A flag to indicate whether the polymer contains at least one monomer that is not considered standard.

getNSubunitsDivisor() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Number of subunits used in the calculation of rise and rotation.

getNSubunitsDivisor() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Number of subunits used in the calculation of rise and rotation.

getNTerminalSeqTag() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Any N-terminal sequence tag as a string of one letter amino acid codes.

getNu0() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle nu0 (C4'-O4'-C1'-C2').

getNu1() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle nu1 (O4'-C1'-C2'-C3').

getNu2() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle nu2 (C1'-C2'-C3'-C4').

getNu3() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle nu3 (C2'-C3'-C4'-O4').

getNu4() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle nu4 (C3'-C4'-O4'-C1').

getNum() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The value of _database_PDB_rev.num must uniquely and sequentially identify a record in the DATABASE_PDB_REV list.

getNum() - Method in class org.rcsb.cif.schema.mm.EntityPolySeq

The value of _entity_poly_seq.num must uniquely and sequentially identify a record in the ENTITY_POLY_SEQ list.

getNum() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _pdbx_entity_branch_list.num in the PDBX_ENTITY_BRANCH_LIST category.

getNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchList

The value pair _pdbx_entity_branch_list.num and _pdbx_entity_branch_list.comp_id must uniquely identify a record in the PDBX_ENTITY_BRANCH_LIST list.

getNum() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

The value of _pdbx_reference_entity_poly_seq.num must uniquely and sequentially identify a record in the PDBX_REFERENCE_ENTITY_POLY_SEQ list.

getNumAngles() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of angles in calculation of _pdbx_rms_devs_covalent.rms_angles.

getNumAngles() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

Total number of angles in calculation of _pdbx_rms_devs_cov_by_monomer.rms_angles.

getNumAnglesBase() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of base angles in calculation of _pdbx_rms_devs_covalent.rms_angles_base.

getNumAnglesPhosphate() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of sugar angles in calculation of _pdbx_rms_devs_covalent.rms_angles_phosphate.

getNumAnglesSugar() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of sugar angles in calculation of _pdbx_rms_devs_covalent.rms_angles_sugar.

getNumber() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

The chemical sequence number to be associated with this atom.

getNumber() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Total number of measured intensities, excluding reflections that are classed as systematically absent arising from translational symmetry in the crystal unit cell.

getNumber() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsClass

Number of measured intensities for a reflection class, excluding the systematic absences arising from centring translations.

getNumber() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

Number of unique standard reflections used in measurements.

getNumber() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

Number of unique standard reflections used in measurements.

getNumber() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

The chemical sequence number to be associated with this atom.

getNumber() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The total number of measured intensities, excluding reflections that are classified as systematically absent.

getNumber() - Method in class org.rcsb.cif.schema.mm.DiffrnReflnsClass

The total number of measured intensities for each reflection class, excluding the systematic absences arising from centring translations.

getNumber() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The number of unique standard reflections used during the measurement of the diffraction intensities.

getNumber() - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

The the number of this type of restraint applied to the domain specified by _pdbx_refine_ls_restr_ncs.dom_id and in the domains against which it was restrained.

getNumber() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

The number of parameters of this type subjected to restraint in least-squares refinement.

getNumberAll() - Method in class org.rcsb.cif.schema.core.Reflns

Number of reflections in the REFLN set (not the DIFFRN_REFLN set).

getNumberAll() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

Total number of reflections used in data processing.

getNumberAll() - Method in class org.rcsb.cif.schema.mm.Reflns

The total number of reflections in the REFLN list (not the DIFFRN_REFLN list).

getNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.ChemComp

The total number of atoms in the component.

getNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The total number of atoms bonded to the atom specified by _chem_comp_chir.atom_id.

getNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.ChemCompPlane

The total number of atoms in the plane.

getNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The total number of atoms bonded to the atom specified by _chem_link_chir.atom_id.

getNumberAtomsAll() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlane

The total number of atoms in the plane.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.ChemComp

The number of non-hydrogen atoms in the component.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The number of non-hydrogen atoms bonded to the atom specified by _chem_comp_chir.atom_id.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.ChemCompPlane

The number of non-hydrogen atoms in the plane.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The number of non-hydrogen atoms bonded to the atom specified by _chem_link_chir.atom_id.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlane

The number of non-hydrogen atoms in the plane.

getNumberAtomsNh() - Method in class org.rcsb.cif.schema.mm.PdbxNonstandardList

The number of non-hydrogen atoms in the het group.

getNumberAtomsSolvent() - Method in class org.rcsb.cif.schema.mm.RefineHist

The number of solvent atoms that were included in the model at this cycle of the refinement.

getNumberAtomsTotal() - Method in class org.rcsb.cif.schema.mm.RefineHist

The total number of atoms that were included in the model at this cycle of the refinement.

getNumberClust() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

The number of clusters of data sets in this phasing experiment.

getNumberConstraints() - Method in class org.rcsb.cif.schema.core.Refine

Number of constrained (non-refined or dependent) parameters in the least-squares process.

getNumberConstraints() - Method in class org.rcsb.cif.schema.core.RefineLs

Number of constrained (non-refined or dependent) parameters in the least-squares process.

getNumberDigitalImages() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The number of real images.

getNumberDisorderedResidues() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The number of discretely disordered residues in the refined model.

getNumberGt() - Method in class org.rcsb.cif.schema.core.Reflns

Count of reflections in the REFLN set (not the DIFFRN_REFLN set) which are significantly intense (see _reflns.threshold_expression).

getNumberGt() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Count of reflections in this REFLN class (not the DIFFRN_REFLN set) which are significantly intense (see _reflns.threshold_expression).

getNumberGt() - Method in class org.rcsb.cif.schema.mm.Reflns

The number of reflections in the REFLN list (not the DIFFRN_REFLN list) that are significantly intense, satisfying the criterion specified by _reflns.threshold_expression.

getNumberGt() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the number of significantly intense reflections (see _reflns.threshold_expression) in the REFLN list (not the DIFFRN_REFLN list).

getNumberInCell() - Method in class org.rcsb.cif.schema.core.AtomType

Total number of atoms of this atom type in the unit cell.

getNumberInCell() - Method in class org.rcsb.cif.schema.mm.AtomType

Total number of atoms of this atom type in the unit cell.

getNumberMarkedReject() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

Total number of reflections marked for rejection in data processing.

getNumberMeasuredAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Total count of reflections measured for this resolution shell.

getNumberMeasuredAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The total number of reflections measured for this shell.

getNumberMeasuredGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Number of reflections measured for this resolution shell which are significantly intense (see _reflns.threshold_expression).

getNumberMeasuredGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The number of significantly intense reflections (see _reflns.threshold_expression) measured for this shell.

getNumberMeasuredObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Number of reflections measured for this resolution shell which are significantly intense (see _reflns.threshold_expression).

getNumberMeasuredObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The number of reflections classified as 'observed' (see _reflns.observed_criterion) for this shell.

getNumberObs() - Method in class org.rcsb.cif.schema.core.Reflns

Count of reflections in the REFLN set (not the DIFFRN_REFLN set) which are significantly intense (see _reflns.threshold_expression).

getNumberObs() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The number of observed reflections in the resolution shell.

getNumberObs() - Method in class org.rcsb.cif.schema.mm.Reflns

The number of reflections in the REFLN list (not the DIFFRN_REFLN list) classified as observed (see _reflns.observed_criterion).

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Float32Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Float64Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Int16Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Int32Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Int8Array

getNumberOfBytes() - Method in interface org.rcsb.cif.binary.data.NumberArray

The number of bytes used in this representation to describe a single value (e.g.

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Uint16Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Uint32Array

getNumberOfBytes() - Method in class org.rcsb.cif.binary.data.Uint8Array

getNumberOfCopies() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

number of copies

getNumberOfGaussians() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

In case of Gaussian mixture models, the number of gaussians is a parameter used to covert the 3DEM maps and models into GMMs.

getNumberOfMonomers() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The number of monomers in the polymer.

getNumberOfOperations() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Number of operations.

getNumberOfOperations() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Number of operations.

getNumberOfProjections() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Number of 2D projections of the model used in the fitting.

getNumberOfSites() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.number_of_sites records the number of site refined for the phasing set.

getNumberOfSites() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The number of heavy-atom sites in this derivative.

getNumberOfSpectralDimensions() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Number of dimension in the spectrum from which the peak list was extracted.

getNumberParameters() - Method in class org.rcsb.cif.schema.core.Refine

Number of parameters refined in the least-squares process.

getNumberParameters() - Method in class org.rcsb.cif.schema.core.RefineLs

Number of parameters refined in the least-squares process.

getNumberPossible() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Count of symmetry-unique reflections possible in this reflection shell.

getNumberPossible() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The number of unique reflections it is possible to measure in this shell.

getNumberPossibleAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Count of symmetry-unique reflections possible in this reflection shell.

getNumberRawMicrographs() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

The number of raw micrographs used to obtain the class average.

getNumberReflns() - Method in class org.rcsb.cif.schema.core.Refine

Number of unique reflections used in the least-squares refinement.

getNumberReflns() - Method in class org.rcsb.cif.schema.core.RefineLs

Number of unique reflections used in the least-squares refinement.

getNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.RefineHist

The number of reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low.

getNumberReflnsAll() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low.

getNumberReflnsGt() - Method in class org.rcsb.cif.schema.core.Refine

The number of reflections that satisfy the resolution limits established by _refine_ls.d_res_high and _refine_ls.d_res_low and the observation limit established by _reflns.observed_criterion.

getNumberReflnsGt() - Method in class org.rcsb.cif.schema.core.RefineLs

The number of reflections that satisfy the resolution limits established by _refine_ls.d_res_high and _refine_ls.d_res_low and the observation limit established by _reflns.observed_criterion.

getNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.RefineHist

The number of reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation criterion established by _reflns.observed_criterion.

getNumberReflnsObs() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation criterion established by _reflns.observed_criterion.

getNumberReflnsObs4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Total number of reflections (4 sigma cutoff).

getNumberReflnsObsNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

Total number of reflections (no cutoff).

getNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.RefineHist

The number of reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getNumberReflnsRFree() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.RefineHist

The number of reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getNumberReflnsRWork() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getNumberRestraints() - Method in class org.rcsb.cif.schema.core.Refine

Number of restrained parameters in the least-squares refinement.

getNumberRestraints() - Method in class org.rcsb.cif.schema.core.RefineLs

Number of restrained parameters in the least-squares refinement.

getNumberSet() - Method in class org.rcsb.cif.schema.mm.PhasingMADClust

The number of data sets in this cluster of data sets.

getNumberStrands() - Method in class org.rcsb.cif.schema.mm.StructSheet

The number of strands in the sheet.

getNumberTerms() - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

The number of observations in this term.

getNumberTotal() - Method in class org.rcsb.cif.schema.core.Reflns

Number of reflections in the REFLN set (not the DIFFRN_REFLN set).

getNumberTotal() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Count of reflections in this REFLN class (not the DIFFRN_REFLN set).

getNumberTotal() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the total number of reflections in the REFLN list (not the DIFFRN_REFLN list).

getNumberUniqueAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Count of symmetry-unique reflections present in this reflection shell.

getNumberUniqueAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The total number of measured reflections which are symmetry- unique after merging for this shell.

getNumberUniqueGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Number of symmetry-unique reflections present in this reflection shell which are significantly intense (see _reflns.threshold_expression).

getNumberUniqueGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The total number of significantly intense reflections (see _reflns.threshold_expression) resulting from merging measured symmetry-equivalent reflections for this resolution shell.

getNumberUniqueObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Number of symmetry-unique reflections present in this reflection shell which are significantly intense (see _reflns.threshold_expression).

getNumberUniqueObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The total number of measured reflections classified as 'observed' (see _reflns.observed_criterion) which are symmetry-unique after merging for this shell.

getNumBonds() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of bonds in calculation of _pdbx_rms_devs_covalent.rms_bonds.

getNumBonds() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

Total number of bonds in calculation of _pdbx_rms_devs_cov_by_monomer.rms_bonds.

getNumBondsBase() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of base bonds in calculation of _pdbx_rms_devs_covalent.rms_bonds_base.

getNumBondsPhosphate() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of sugar bonds in calculation of _pdbx_rms_devs_covalent.rms_bonds_phosphate.

getNumBondsSugar() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total number of sugar bonds in calculation of _pdbx_rms_devs_covalent.rms_bonds_sugar.

getNumbPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxIonInfo

Number of ion molecules per asymmetric unit.

getNumbPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxSolventInfo

Number of solvent molecules per asymmetric unit.

getNumClassAverages() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

This item was correspondence to two type of em dataset processing_emDataSet_singleParticle.numClassAverages processing_emDataSet_icosahedral.numClassAverages

getNumClasses() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

The number of classes used in the final 2D classification

getNumComponents() - Method in class org.rcsb.cif.schema.mm.EmAssembly

The number of components of the biological assembly.

getNumConect() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumConformersCalculated() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

The number of model conformers calculated.

getNumConformersSubmitted() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

The number of model conformers submitted in the entry

getNumCoord() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumCopies() - Method in class org.rcsb.cif.schema.mm.PdbxEntityAssembly

The number of copies of this entity in the assembly.

getNumDiffractionImages() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The number of diffraction images collected.

getNumEnsembleModels() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

The number of models in the current ensemble being described.

getNumEnsembleModelsDeposited() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

The number of models from the current ensemble that is deposited.

getNumFtnote() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumGridsImaged() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

Number of grids in the microscopy session

getNumHelix() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumHet() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumIntensitiesMeasured() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Total number of diffraction intensities measured (before averaging)

getNumModels() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

Number of models sampled in the integrative modeling task, for which the crosslinking distance is provided.

getNumModels() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

The number of models in the ensemble sub sample.

getNumModelsBegin() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The number of models at the beginning of the post processing step.

getNumModelsBegin() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

The number of models in the beginning of the step.

getNumModelsDeposited() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

The number of models in the sub sample that are deposited.

getNumModelsEnd() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The number of models the the end of the post processing step.

getNumModelsEnd() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

The number of models at the end of the step.

getNumOfNAStrandsPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

Number of na strands per asymmetric unit.

getNumOfNAStrandsPerBiolUnit() - Method in class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

Number of na strands per biological unit.

getNumOfWholeMolecule() - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

Number of drug molecules per biological unit.

getNumParticles() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

The number of particles selected from the projection set of images.

getNumParticles() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The number of 2D projections or 3D subtomograms used in the 3d reconstruction

getNumParticlesSelected() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

The number of particles selected from the projection set of images.

getNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

Number of drug molecules per asymmetric unit.

getNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxInhibitorInfo

Number of inhibitor molecules per asymmetric unit.

getNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxProteinInfo

Number of protein molecules per asymmetric unit.

getNumPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxTrnaInfo

Number of trna molecules per asymmetric unit.

getNumRealImages() - Method in class org.rcsb.cif.schema.mm.EmImageRecording

The number of micrograph images collected.

getNumRemark() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumSeqres() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumSheet() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumSite() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumSteps() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocol

Number of independent steps in the modeling protocol.

getNumStructureFactors() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Number of measured structure factors in this resolution shell

getNumStructureFactors() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Number of structure factors obtained (merged amplitudes + phases)

getNumTer() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumTimeFrames() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The number of time frame solution scattering images used.

getNumTomograms() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

The number of tomograms used in the extraction/selection

getNumTrans() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumTurn() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

The number of PDB records of a particular type.

getNumVolumesExtracted() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

The number of volumes selected from the projection set of images.

getO1pPO2p() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o1p_p_o2p covalent element of this monomer.

getO3C3C2O2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o3_c3_c2_o2 covalent element of this monomer.

getO3P() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o3_p covalent element of this monomer.

getO3PO5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o3_p_o5 covalent element of this monomer.

getO3PO5C5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o3_p_o5_c5 covalent element of this monomer.

getO4C1() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1 covalent element of this monomer.

getO4C1C2() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1_c2 covalent element of this monomer.

getO4C1C2C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1_c2_c3 covalent element of this monomer.

getO4C1N19() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1_n1_9 covalent element of this monomer.

getO4C1N19C24() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1_n1_9_c2_4 covalent element of this monomer.

getO4C1N19C68() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c1_n1_9_c6_8 covalent element of this monomer.

getO4C4C3O3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o4_c4_c3_o3 covalent element of this monomer.

getO5C5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o5_c5 covalent element of this monomer.

getO5C5C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o5_c5_c4 covalent element of this monomer.

getO5C5C4C3() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o5_c5_c4_c3 covalent element of this monomer.

getO5C5C4O4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The o5_c5_c4_o4 covalent element of this monomer.

getObjectCharacteristic() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The characteristic of the geometric object used in the restraint.

getObjectDescription() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectList

Brief description of the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectAxis

Identifier to the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

Identifier to the geometric object involved in the distance restraint.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectHalfTorus

Identifier to the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectList

A unique identifier for the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectPlane

Identifier to the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

Identifier to the geometric object.

getObjectId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

Identifier to the geometric object.

getObjectName() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectList

User-provided name for the object.

getObjectRadius() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The radius associated with the primitive sphere object at this position.

getObjectType() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectList

The type of geometric object.

getObserved() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

A flag to indicate that this monomer is observed in the instance example.

getObservedCriterion() - Method in class org.rcsb.cif.schema.core.Reflns

Description of the criterion used to classify a reflection as having a "significant intensity".

getObservedCriterion() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed'.

getObservedCriterionFMax() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as an upper limit for the value of F.

getObservedCriterionFMin() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as a lower limit for the value of F.

getObservedCriterionIMax() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as an upper limit for the value of I.

getObservedCriterionIMin() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as a lower limit for the value of I.

getObservedCriterionSigmaF() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as a multiple of the value of sigma(F).

getObservedCriterionSigmaI() - Method in class org.rcsb.cif.schema.mm.Reflns

The criterion used to classify a reflection as 'observed' expressed as a multiple of the value of sigma(I).

getObservedStatus() - Method in class org.rcsb.cif.schema.core.Refln

Code indicating how the reflection was included in the refinement and R-factor calculations.

getObsoletedDate() - Method in class org.rcsb.cif.schema.mm.EmAdmin

date that map entry was obsoleted

getObsoleteInstructions() - Method in class org.rcsb.cif.schema.mm.EmDepui

Instruction for annotators on why a previous released entry should be obsoleted.

getOccupancy() - Method in class org.rcsb.cif.schema.core.AtomSite

The fraction of the atom type present at this site.

getOccupancy() - Method in class org.rcsb.cif.schema.mm.AtomSite

The fraction of the atom type present at this site.

getOccupancy() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.occupancy records the fraction of the atom type presented at this site.

getOccupancy() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

The fraction of the atom type present at the current atom site.

getOccupancy() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The fraction of the atom type present at the current atom site.

getOccupancy() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The fraction of the atom type present at this heavy-atom site in a given derivative.

getOccupancyAnom() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The relative anomalous occupancy of the atom type present at this heavy-atom site in a given derivative.

getOccupancyAnomSu() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.occupancy_anom.

getOccupancyEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the The fraction of the atom type present at this site.

getOccupancyEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.occupancy.

getOccupancyEsd() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

_pdbx_phasing_MAD_set_site.occupancy_esd records estimated standard deviation of the fraction of the atom type presented at this site.

getOccupancyFlag() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

The value of occupancy flag indicates whether the atom is either unobserved (=1) or has zero occupancy (=0)

getOccupancyFlag() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

The value of occupancy flag indicates whether the residue is unobserved (= 1) or the coordinates have an occupancy of zero (=0)

getOccupancyIso() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

The relative real isotropic occupancy of the atom type present at this heavy-atom site in a given atom site.

getOccupancyIso() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The relative real isotropic occupancy of the atom type present at this heavy-atom site in a given derivative.

getOccupancyIsoSu() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerSite

The standard uncertainty (estimated standard deviation) of _phasing_MIR_der_site.occupancy_iso.

getOccupancyMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The maximum occupancy reported in the model file.

getOccupancyMax() - Method in class org.rcsb.cif.schema.mm.Refine

The maximum value for occupancy found in the coordinate set.

getOccupancyMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The averaged occupancy reported in the model file.

getOccupancyMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The averaged occupancy for the residue.

getOccupancyMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The average occupancy for the residue.

getOccupancyMeanMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The averaged occupancy forthe main chain atoms.

getOccupancyMeanPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The averaged occupancy forthe phosphate atoms.

getOccupancyMeanSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The averaged occupancy forthe side chain atoms.

getOccupancyMin() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The minimum occupancy reported in the model file.

getOccupancyMin() - Method in class org.rcsb.cif.schema.mm.Refine

The minimum value for occupancy found in the coordinate set.

getOccupancyOutliersHigh() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

Count of atoms with occupancy values greater than 1

getOccupancyOutliersLow() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

Count of atoms with occupancy values less than 0

getOccupancySu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard Uncertainty value for the The fraction of the atom type present at this site.

getOccupancySumHydrogen() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The sum of the occupancies of the hydrogen atoms in the refined model.

getOccupancySumNonHydrogen() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The sum of the occupancies of the non-hydrogen atoms in the refined model.

getOD() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

The optical density of the expression culture in arbitrary units at the timepoint specified.

getOdRange() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The optical density range (OD=-log 10 transmission).

getOffset() - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

Designates the relative position in the sheet, plus or minus, of the second residue range to the first.

getOffset() - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

Designates the relative position in the sheet, plus or minus, of the second residue range to the first.

getOligomericCount() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

The number of polymer molecules in the assembly.

getOligomericCount() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

The number of polymer molecules in the assembly.

getOligomericDetails() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

oligomeric details

getOligomericDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssembly

Provides the details of the oligomeric state of the assembly.

getOligomericDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

Provides the details of the oligomeric state of the assembly.

getOmega() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

The value of the OMEGA angle for the peptide linkage between the two defined residues

getOmega() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

The value of the OMEGA angle for the peptide linkage between the two defined residues

getOmega() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the main-chain torsion angle omega.

getOneLetterCode() - Method in class org.rcsb.cif.schema.mm.ChemComp

For standard polymer components, the one-letter code for the component.

getOneLetterCode() - Method in class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

Coordinate sequence expressed as string of one-letter residue codes.

getOneLetterCodeMod() - Method in class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

Coordinate sequence expressed as string of one-letter residue codes with nonstandard residues expressed as 3-letter codes in parentheses.

getOneLetterCodes() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

The one-letter-code sequence for this entity.

getOpening() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair opening parameter.

getOperationDescription() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

An optional text description of a particular symmetry operation of the space group.

getOperationXyz() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

A parsable string giving one of the symmetry operations of the space group in algebraic form.

getOperationXyz() - Method in class org.rcsb.cif.schema.mm.SpaceGroupSymop

A parsable string giving one of the symmetry operations of the space group in algebraic form.

getOperator() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

The possible merohedral or hemihedral twinning operators for different point groups are: True point group Twin operation hkl related to 3 2 along a,b h,-h-k,-l 2 along a*,b* h+k,-k,-l 2 along c -h,-k,l 4 2 along a,b,a*,b* h,-k,-l 6 2 along a,b,a*,b* h,-h-k,-l 321 2 along a*,b*,c -h,-k,l 312 2 along a,b,c -h,-k,l 23 4 along a,b,c k,-h,l References: Yeates, T.O.

getOperExpression() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

Identifies the operation of collection of operations from category PDBX_STRUCT_OPER_LIST.

getOperExpression() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

Identifies the operation of collection of operations from category PDBX_STRUCT_OPER_LIST.

getOperExpression() - Method in class org.rcsb.cif.schema.mm.PdbxStructAsymGen

Identifies the operation from category PDBX_STRUCT_OPER_LIST.

getOperExpression() - Method in class org.rcsb.cif.schema.mm.PdbxStructMsymGen

Identifies the operation from category PDBX_STRUCT_OPER_LIST.

getOperId() - Method in class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

Identifies the NCS operation (_struct_ncs_oper.id)

getOperId() - Method in class org.rcsb.cif.schema.mm.StructNcsEnsGen

This data item is a pointer to _struct_ncs_oper.id in the STRUCT_NCS_OPER category.

getOpticalRotation() - Method in class org.rcsb.cif.schema.core.Chemical

The optical rotation in solution of the compound is specified in the following format: '[\a]^TEMP^~WAVE~ = SORT (c = CONC, SOLV)' where: TEMP is the temperature of the measurement in degrees Celsius, WAVE is an indication of the wavelength of the light used for the measurement, CONC is the concentration of the solution given as the mass of the substance in g in 100 ml of solution, SORT is the signed value (preceded by a + or a - sign) of 100.\a/(l.c), where \a is the signed optical rotation in degrees measured in a cell of length l in dm and c is the value of CONC in g, and SOLV is the chemical formula of the solvent.

getOpticalRotation() - Method in class org.rcsb.cif.schema.mm.Chemical

The optical rotation in solution of the compound is specified in the following format: '[\a]^TEMP^~WAVE~ = SORT (c = CONC, SOLV)' where: TEMP is the temperature of the measurement in degrees Celsius, WAVE is an indication of the wavelength of the light used for the measurement, CONC is the concentration of the solution given as the mass of the substance in g in 100 ml of solution, SORT is the signed value (preceded by a + or a - sign) of 100.\a/(l.c), where \a is the signed optical rotation in degrees measured in a cell of length l in dm and c is the value of CONC as defined above, and SOLV is the chemical formula of the solvent.

getOrDefault(Object, V) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

getOrder() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Stage of the reconstruction in which the angle assignments were made.

getOrderedBy() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

The parameter based on which the ordering is carried out.

getOrderedFlag() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A flag to indicate if the modeling involves an ensemble ordered by time or other order.

getOrdinal() - Method in class org.rcsb.cif.schema.core.CitationAuthor

Ordinal code specifies the order of the author's name in the list of authors of the citation.

getOrdinal() - Method in class org.rcsb.cif.schema.core.CitationEditor

This data item defines the order of the editor's name in the list of editors of a citation.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.CitationAuthor

This data item defines the order of the author's name in the list of authors of a citation.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.CitationEditor

This data item defines the order of the editor's name in the list of editors of a citation.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.EmAuthorList

ID 1 corresponds to the main author of the entry

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditAuthor

A unique sequential integer identifier for each author.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

A unique identifier for the pdbx_audit_revision_category record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

A unique identifier for the pdbx_audit_revision_details record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

A unique identifier for the pdbx_audit_revision_group record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

A unique identifier for the pdbx_audit_revision_history record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

A unique identifier for the pdbx_audit_revision_item record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditSupport

A unique sequential integer identifier for each source of support for this entry.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

This data item uniquely identifies and orders each atom edit instruction.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

This data item uniquely identifies and orders each bond edit instruction.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

The value of pdbx_chem_comp_instance_depositor_info.ordinal must uniquely identify a record in the PDBX_CHEM_COMP_INSTANCE_DEPOSITOR_INFO list.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

Ordinal index for the status history list.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The ordered number in the output list.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

Ordinal index for the each file reference.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

Ordinal index for the each message.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

Ordinal identifier for each update record.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

An ordinal identifier uniquely identifying records in the pdbx_nmr_systematic_chem_shift_offset category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The value of _pdbx_reference_entity_src_nat.ordinal distinguishes source details for this entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

This data item distinguishes anotations for this entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

The value of _pdbx_reference_molecule_details.ordinal is an ordinal that distinguishes each descriptive text for this entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The value of _pdbx_reference_molecule_features.ordinal distinguishes each feature for this entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

The value of _pdbx_reference_molecule_related_structures.ordinal distinguishes related structural data for each entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

The value of _pdbx_reference_molecule_synonyms.ordinal is an ordinal to distinguish synonyms for this entity.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

Ordinal identifier for each related experimental data set.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

An ordinal index for this category

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

The value of _pdbx_struct_group_component_range.id must uniquely identify a record in the PDBX_STRUCT_GROUP_COMPONENT_RANGE list.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

The value of _pdbx_struct_group_components.ordinal must uniquely identify each item in the PDBX_STRUCT_GROUP_COMPONENTS list.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

Ordinal index for this category.

getOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

Ordinal identifier for each experimental data set.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmEprRestraint

A unique identifier for the EPR restraint description.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

A unique identifier for the category.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmNonPolyFeature

A unique identifier for the category.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

A unique identifier for the category.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

A unique identifier for the category.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

A unique identifier for this coordinate position.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The value of _pdbx_chem_comp_model_atom.ordinal_id is an ordinal identifer for each atom in the PDBX_CHEM_COMP_MODEL_ATOM list.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

The value of _pdbx_chem_comp_model_bond.ordinal_id is an ordinal identifer for each atom in the PDBX_CHEM_COMP_MODEL_BOND list.

getOrdinalId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A unique identifier for the index entry within the deposition group.

getOrgan() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The organ of the organism from which the component was obtained.

getOrganelle() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The organelle from which the component was obtained.

getOrganisation() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

_pdbx_construct.organisation describes the organisation in which the _pdbx_construct.id is unique.

getOrganism() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The genus-species of the natural organism from which the component was obtained.

getOrganism() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

Expression system host organism used to produce the component.

getOrganism() - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

The host organism from which the virus was isolated.

getOrganismCommonName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

The common name of the organism from which the sequence of the synthetic entity was derived.

getOrganismScientific() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

The scientific name of the organism from which the sequence of the synthetic entity was derived.

getOrganismScientific() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The scientific name of the organism from which the entity was isolated.

getOrganizationType() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The organization type to which this author is affiliated.

getOriginCol() - Method in class org.rcsb.cif.schema.mm.EmMap

The position of the first column of the map relative to the Cartesian coordinate origin in voxel grid units.

getOriginRow() - Method in class org.rcsb.cif.schema.mm.EmMap

The position of the first row of the map relative to the Cartesian coordinate origin in voxel grid units.

getOriginSec() - Method in class org.rcsb.cif.schema.mm.EmMap

The position of the first section of the map relative to the Cartesian coordinate origin in voxel grid units.

getOriginX() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The x coordinate in angstroms of the origin to which the TLS parameters are referred, specified according to a set of orthogonal Cartesian axes related to the cell axes as given in _atom_sites.Cartn_transform_axes.

getOriginY() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The y coordinate in angstroms of the origin to which the TLS parameters are referred, specified according to a set of orthogonal Cartesian axes related to the cell axes as given in _atom_sites.Cartn_transform_axes.

getOriginZ() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The z coordinate in angstroms of the origin to which the TLS parameters are referred, specified according to a set of orthogonal Cartesian axes related to the cell axes as given in _atom_sites.Cartn_transform_axes.

getOrigx11() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx12() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx13() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx21() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx22() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx23() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx31() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx32() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigx33() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX matrix.

getOrigxVector1() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX vector.

getOrigxVector2() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX vector.

getOrigxVector3() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB ORIGX vector.

getOrthogonalMatrix() - Method in class org.rcsb.cif.schema.core.Cell

Orthogonal matrix of the crystal unit cell.

getOrthogonalTiltAngle1() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Tilt angle for the 1st image set of the orthogonal tilt pairs

getOrthogonalTiltAngle2() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Tilt angle for the 2nd image set of the orthogonal tilt pairs

getOrthogonalTiltNumImages() - Method in class org.rcsb.cif.schema.mm.EmStartModel

number of images used to generate the orthogonal tilt startup model

getOs() - Method in class org.rcsb.cif.schema.mm.Software

The name of the operating system under which the software runs.

getOscillationEnd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Ending oscillation angle (in degrees) (default end = start + range).

getOscillationRange() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The actual oscillation angle (normally <1.0 degree).

getOscillationStart() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Starting oscillation angle (in degrees) .

getOsVersion() - Method in class org.rcsb.cif.schema.mm.Software

The version of the operating system under which the software runs.

getOther() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Description of other method/source used to generate the startup model

getOtherShiftsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A value indicating if chemical shifts other than 1H, 13C, 15N, or 31P are being deposited.

getOverallBValue() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The overall B (temperature factor) value for the 3d-em volume.

getOverallFOMFreeRSet() - Method in class org.rcsb.cif.schema.mm.Refine

Average figure of merit of phases of reflections not included in the refinement.

getOverallFOMWorkRSet() - Method in class org.rcsb.cif.schema.mm.Refine

Average figure of merit of phases of reflections included in the refinement.

getOverallPhaseError() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Overall phase error in degrees

getOverallPhaseResidual() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Overall phase residual in degrees

getOverallScore() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall score for the geometry (the smaller the better).

getOverallSUB() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on a maximum-likelihood residual.

getOverallSUML() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the positional parameters based on a maximum likelihood residual.

getOverallSURCruickshankDPI() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on the crystallographic R value, expressed in a formalism known as the dispersion precision indicator (DPI).

getOverallSURFree() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on the free R value.

getOxidationNumber() - Method in class org.rcsb.cif.schema.core.AtomType

Formal oxidation state of this atom type in the structure.

getOxidationNumber() - Method in class org.rcsb.cif.schema.mm.AtomType

Formal oxidation state of this atom type in the structure.

getP() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

P is the phase angle of pseudorotation for five-membered rings.

getPacking() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.packing identifies the packing of search model in the unit cell.

getPackingType() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Packing type

getPadilla_YeatesL2Mean() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <L^2> calculated by Xtriage using acentric reflections.

getPadilla_YeatesL2MeanPointless() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <L^2> calculated by Pointless using acentric reflections.

getPadilla_YeatesLMean() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Value of <|L|> calculated by Xtriage using acentric reflections.

getPageFirst() - Method in class org.rcsb.cif.schema.core.Citation

First page of citation; relevant for articles and book chapters.

getPageFirst() - Method in class org.rcsb.cif.schema.core.Journal

First page of the publication in the journal.

getPageFirst() - Method in class org.rcsb.cif.schema.mm.Citation

The first page of the citation; relevant for journal articles, books and book chapters.

getPageFirst() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getPageId() - Method in class org.rcsb.cif.schema.mm.PdbxAtlas

A unique identifier for a NDB ATLAS index page.

getPageLast() - Method in class org.rcsb.cif.schema.core.Citation

Last page of citation; relevant for articles and book chapters.

getPageLast() - Method in class org.rcsb.cif.schema.core.Journal

Last page of the publication in the journal.

getPageLast() - Method in class org.rcsb.cif.schema.mm.Citation

The last page of the citation; relevant for journal articles, books and book chapters.

getPageLast() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getPageName() - Method in class org.rcsb.cif.schema.mm.PdbxAtlas

Text of the Atlas index entry.

getPairName() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Text label for this base pair.

getPairNumber() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

Sequential number of pair in the pair sequence.

getPaperCategory() - Method in class org.rcsb.cif.schema.core.Journal

Category of the publication in the journal.

getPaperCategory() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getPaperDoi() - Method in class org.rcsb.cif.schema.core.Journal

DOI of the publication in the journal.

getParameter() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

The name of the parameter associated with the process step

getParamFile() - Method in class org.rcsb.cif.schema.mm.PdbxXplorFile

Parameter file name in X-PLOR/CNS refinement.

getParent() - Method in class org.rcsb.cif.schema.mm.PhasingIsomorphous

Reference to the structure used to generate starting phases if the structure referenced in this data block was phased by virtue of being isomorphous to a known structure (e.g.

getParentAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

The parent of this assembly in a hierarchy.

getParentCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

The parent component identifier corresponding to this entity.

getParentCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

The parent component identifier for this modified polymer component.

getParentId() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The parent of this assembly.

getParentId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomyTree

This data item identifies the nearest parent node in the entity name taxonomy.

getParentMessageId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The identifier of the parent message or the message to which the current message responds.

getParentMonId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

This data item is the chemical component identifier for the parent component corresponding to this monomer.

getParentResidue() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Parent residue

getPartialBValueCorrectionAttempted() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Whether attempt to convert the partial to full B factors before validation.

getPartialBValueCorrectionSuccess() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Whether the the conversion of partial B to full B factor is successful (Y) or not (N).

getPartialCharge() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The partial charge assigned to this atom.

getPartition() - Method in class org.rcsb.cif.schema.mm.EmMap

Identifies the archive file partition number of a primary map, half map, additional map, or mask.

getPartitionNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The partition number of the referenced data file.

getPatternCount() - Method in class org.rcsb.cif.schema.mm.PdbxSequencePattern

Number of occurences of the sequence pattern within the named strand.

getPattersonNameH_M() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The Hermann-Mauguin symbol of the type of that centrosymmetric symmorphic space group to which the Patterson function belongs; see Table 2.2.5.1 in International Tables for Crystallography Volume A (2002).

getPDB() - Method in class org.rcsb.cif.schema.core.Database

Code assigned by the Protein Data Base.

getPDB() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned by the Protein Data Base.

getPdbAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

getPdbChainId() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

The ID of the biopolymer chain used for fitting, e.g., A.

getPdbChainId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds the PDB chain id of this entity within the entry.

getPdbChainId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PDB chain ID.

getPdbChainId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceAnnotation

PDB chain ID.

getPdbChainId() - Method in class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

The NCS operation is applied to the chain identified by this id.

getPdbChainResidueRange() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

The molecular entities represented in this fitting description.

getPdbDateOfAuthorApproval() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This is the date when PDB received the author's approval for an entry which has been processed by NDB.

getPdbEntryId() - Method in class org.rcsb.cif.schema.mm.Em3dFittingList

The PDB code for the entry used in fitting.

getPdbFormatCompatible() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

A flag indicating that the entry is compatible with the PDB format.

getPdbid() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The PDB id code.

getPdbid() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The PDB id code.

getPdbid() - Method in class org.rcsb.cif.schema.mm.PdbxDccMapman

The PDB id code.

getPdbid() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

The PDB id code.

getPdbId() - Method in class org.rcsb.cif.schema.mm.EmStartModel

PDB id of the model coordinates used to generate the startup model

getPdbId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

The new PDB identifier for the replaced entry.

getPdbId() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The PDB id code (four characters).

getPdbId() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The PDB id code.

getPdbId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds a PDB ID code

getPdbIdCode() - Method in class org.rcsb.cif.schema.mm.PdbxDbref

PDB id code.

getPdbIdCode() - Method in class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

A PDB accession code.

getPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

PDB insertion code.

getPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

PDB insertion code.

getPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

Insertion code of the monomer or ligand .

getPdbInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

Insertion code of the monomer or ligand .

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_site.pdbx_ins_code in the ATOM_SITE category.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

Optional element of the chemical component instance identifier.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

A component of the identifier for the component.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

Optional atom_site identifier.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

Optional atom_site identifier.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the author identifier of the inserted residue.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

Optional identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

Optional identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

Optional identifier of the residue in which the plane is calculated This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

Optional identifier of an atom site that defines the plane

getPDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

Optional identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Optional identifier of the first of the two atom sites that define the close contact.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Optional identifier of the first residue in the bond This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Optional identifier of the first of the two atom sites that define the linkage.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Optional identifier of the first of the three atom sites that define the angle.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Optional identifier of the first of the two atom sites that define the covalent bond.

getPDBInsCode1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Optional identifier of the first of the two atom sites that define the close contact.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

Optional identifier of the second of the two atom sites that define the close contact.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

Optional identifier of the second residue in the bond This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

Optional identifier of the second of the two atom sites that define the linkage.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Optional identifier of the second of the three atom sites that define the angle.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

Optional identifier of the second of the two atom sites that define the covalent bond.

getPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

Optional identifier of the second of the two atom sites that define the close contact.

getPDBInsCode3() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

Optional identifier of the third of the three atom sites that define the angle.

getPdbInsertionCode() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PDB chain ID.

getPdbModelId() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PDB model ID.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

Part of the identifier for the distant solvent atom.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

Part of the identifier for the component range in this group assignment.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

Part of the identifier for the component in this group assignment.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructModResidue

Part of the identifier for the modified polymer component.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

Part of the identifier for the molecular component.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

Part of the identifier for the unobserved or zero occupancy atom.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

Part of the identifier for the unobserved or zero occupancy residue.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateChiral

The model number for the given residue This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

The model number for the given contact

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

The model number for the residue in which the plane is calculated This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

The model number for the given residue This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

The model number for the given angle This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

The model number for an atom site defining the plane This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

The model number for the given linkage

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

The model number for the given angle

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

The model number for the given bond

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

The model number for the given angle

getPDBModelNum() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

The model number for the given residue This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

getPdbMolId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds the PDB molecule id of this entity within the entry.

getPdbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

getPdbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

PDB residue identifier.

getPdbMonId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

PDB residue identifier.

getPdbResidueName() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PDB chain ID.

getPdbResidueNumber() - Method in class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PDB chain ID.

getPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxBranchScheme

This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

getPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

PDB residue number.

getPdbSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

PDB residue number.

getPdbStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

PDB strand/chain id.

getPdbStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

PDB strand/chain id.

getPdbStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

PDB strand/chain id.

getPdbStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

PDB strand/chain id.

getPdbStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

PDB strand/chain id.

getPdbtype() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The keywords of the structure (taken from _struct_keywords.pdbx_keywords).

getPdbxAfterBeginResidueNo() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

The new residue number after generation of portions of the biomolecule.

getPdbxAfterEndResidueNo() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

The new residue number after generation of portions of the biomolecule.

getPdbxAggregationState() - Method in class org.rcsb.cif.schema.mm.StructBiol

A description of the structural aggregation in this assembly.

getPdbxAlign() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

Atom name alignment offset in PDB atom field.

getPdbxAlign() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

An optional alignment flag.

getPdbxAlignBegin() - Method in class org.rcsb.cif.schema.mm.StructRef

Beginning index in the chemical sequence from the reference database.

getPdbxAlignEnd() - Method in class org.rcsb.cif.schema.mm.StructRef

Ending index in the chemical sequence from the reference database.

getPdbxAltAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative identifier for the atom.

getPdbxAltCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative identifier for the atom.

getPdbxAltId() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item is a pointer to _atom_site.ndb_alias_strand_id the ATOM_SITE category.

getPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

This data item identifies cases in which an alternative source modeled.

getPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

This data item identifies cases in which an alternative source modeled.

getPdbxAltSourceFlag() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

This data item identifies cases in which an alternative source modeled.

getPdbxAmbiguousFlag() - Method in class org.rcsb.cif.schema.mm.ChemComp

A preliminary classification used by PDB to indicate that the chemistry of this component while described as clearly as possible is still ambiguous.

getPdbxAnalyzer() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Indicates the method used to obtain monochromatic radiation.

getPdbxAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The initials of the annotator processing this entry.

getPdbxAnomalousDiff() - Method in class org.rcsb.cif.schema.mm.Refln

The measured anomalous difference.

getPdbxAnomalousDiffSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard deviation in the anomalous difference.

getPdbxAnomDifference() - Method in class org.rcsb.cif.schema.mm.Refln

The amplitude difference of the Friedel pair, D(hkl) = F(hkl) - F(-h-k-l).

getPdbxAnomDifferenceSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The the standard deviation of the amplitude difference of the Friedel pair, D(hkl) = F(hkl) - F(-h-k-l).

getPdbxAnomScatMethod() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_anom_scat_method records the method used to locate anomalous scatterers for MAD phasing.

getPdbxAntibodyIsotype() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

PDB placeholder.

getPdbxAromaticFlag() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A flag indicating an aromatic atom.

getPdbxAromaticFlag() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

A flag indicating an aromatic bond.

getPdbxAssemblyMethod() - Method in class org.rcsb.cif.schema.mm.StructBiol

The method or experiment used to determine this assembly.

getPdbxAsymId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

A reference to _struct_asym.id.

getPdbxAtcc() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Americal Tissue Culture Collection number.

getPdbxAtlas() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Gives information about the organization of the NDB Structural Atlas.

getPdbxAtomGroup() - Method in class org.rcsb.cif.schema.mm.AtomSite

The ATOM group code used by the NDB.

getPdbxAtomSiteAnisoTls() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ATOM_SITE_ANISO_TLS category record details about the TLS contribution to anisotropic displacement parameters.

getPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.GeomBond

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.GeomContact

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.GeomBond

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.GeomContact

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomSitePDBInsCode4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxAtomType() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

record the type of heavy atoms which produce anomolous singal.

getPdbxAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_AUDIT holds current version information.

getPdbxAuditAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_AUTHOR category record details about the author(s) of the data block.

getPdbxAuditConformExtension() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_CONFORM_EXTENSION category describe extension dictionary versions against which the data names appearing the current data block are conformant.

getPdbxAuditRevisionCategory() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_REVISION_CATEGORY category report the data categories associated with a PDBX_AUDIT_REVISION_HISTORY record.

getPdbxAuditRevisionDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_audit_revision_details category record descriptions of changes associated with PDBX_AUDIT_REVISION_HISTORY records.

getPdbxAuditRevisionGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_revision_group category report the content groups associated with a PDBX_AUDIT_REVISION_HISTORY record.

getPdbxAuditRevisionHistory() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_REVISION_HISTORY category record the revision history for a data entry.

getPdbxAuditRevisionItem() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_REVISION_ITEM category report the data items associated with a PDBX_AUDIT_REVISION_HISTORY record.

getPdbxAuditSupport() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_AUDIT_SUPPORT category record details about funding support for the entry.

getPdbxAuthAltId() - Method in class org.rcsb.cif.schema.mm.AtomSite

Author's alternate location identifier.

getPdbxAuthAltId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.pdbx_auth_alt_id.

getPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.AtomSite

Author's strand id.

getPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.auth_asym_id

getPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

A reference to the PDB Chain ID

getPdbxAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSite

A component of the identifier for the ligand in the site.

getPdbxAuthAsymId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.auth_asym_id.

getPdbxAuthAtomId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.auth_atom_id

getPdbxAuthAtomName() - Method in class org.rcsb.cif.schema.mm.AtomSite

Author's atom name.

getPdbxAuthAtomName() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Author's atom name.

getPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.AtomSite

Author's residue name.

getPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.auth_comp_id

getPdbxAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSite

A component of the identifier for the ligand in the site.

getPdbxAuthCompId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.auth_comp_id.

getPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

PDB Insertion code

getPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.StructSite

PDB insertion code for the ligand in the site.

getPdbxAuthInsCode() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

PDB insertion code.

getPdbxAuthInsCode2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

PDB Insertion code

getPdbxAuthSeqAlignBeg() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Initial position in the PDB sequence segment.

getPdbxAuthSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Ending position in the PDB sequence segment

getPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.AtomSite

Author's sequence identifier.

getPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.auth_seq_id

getPdbxAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSite

A component of the identifier for the ligand in the site.

getPdbxAuthSeqId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.auth_seq_id

getPdbxAuthSeqNum() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

Insertion code in PDB sequence

getPdbxAverageFscFree() - Method in class org.rcsb.cif.schema.mm.Refine

Average Fourier Shell Correlation (avgFSC) between model and observed structure factors for reflections not included in refinement.

getPdbxAverageFscOverall() - Method in class org.rcsb.cif.schema.mm.Refine

Overall average Fourier Shell Correlation (avgFSC) between model and observed structure factors for all reflections.

getPdbxAverageFscWork() - Method in class org.rcsb.cif.schema.mm.Refine

Average Fourier Shell Correlation (avgFSC) between model and observed structure factors for reflections included in refinement.

getPdbxBath() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The identification of the cystallization bath.

getPdbxBeforeBeginResidueNo() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

The number of the first residue to which the symmetry operations have to be applied to generate a portion of the biomolecule.

getPdbxBeforeEndResidueNo() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

The number of the last residue to which the symmetry operations have to be applied to generate a portion of the biomolecule.

getPdbxBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment starts.

getPdbxBegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta sheet range begins.

getPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The beginning polymer sequence position for the polymer section corresponding to this source.

getPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The beginning polymer sequence position for the polymer section corresponding to this source.

getPdbxBegSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

The beginning polymer sequence position for the polymer section corresponding to this source.

getPdbxBIsoMeanLigand() - Method in class org.rcsb.cif.schema.mm.RefineHist

Mean isotropic B-value for ligand molecules included in refinement.

getPdbxBIsoMeanSolvent() - Method in class org.rcsb.cif.schema.mm.RefineHist

Mean isotropic B-value for solvent molecules included in refinement.

getPdbxBlankPDBChainidFlag() - Method in class org.rcsb.cif.schema.mm.StructAsym

A flag indicating that this entity was originally labeled with a blank PDB chain id.

getPdbxBondDistanceLimits() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category provides a table of upper and lower distance limits used as criteria in determining covalent bonds.

getPdbxBranchScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_BRANCH_SCHEME category provides residue level nomenclature mapping for branch chain entities.

getPdbxBuffer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_BUFFER category record details of the sample buffer.

getPdbxBufferComponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Constituents of buffer in sample

getPdbxBuildSelfReference() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A code to indicate that this sequence should be assigned a PDB sequence reference.

getPdbxCasnum() - Method in class org.rcsb.cif.schema.mm.ChemComp

Chemical Abstract Service identifier.

getPdbxCASPFlag() - Method in class org.rcsb.cif.schema.mm.Struct

The item indicates whether the entry is a CASP target, a CASD-NMR target, or similar target participating in methods development experiments.

getPdbxCCHalf() - Method in class org.rcsb.cif.schema.mm.Reflns

The Pearson's correlation coefficient expressed as a decimal value between the average intensities from randomly selected half-datasets.

getPdbxCCHalf() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The Pearson's correlation coefficient expressed as a decimal value between the average intensities from randomly selected half-datasets within the resolution shell.

getPdbxCCStar() - Method in class org.rcsb.cif.schema.mm.Reflns

Estimates the value of CC_true, the true correlation coefficient between the average intensities from randomly selected half-datasets.

getPdbxCCStar() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

Estimates the value of CC_true, the true correlation coefficient between the average intensities from randomly selected half-datasets within the resolution shell.

getPdbxCell() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

A particular cell type.

getPdbxCellLine() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The specific line of cells.

getPdbxCellularLocation() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Identifies the location inside (or outside) the cell.

getPdbxChemCompAtomEdit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_ATOM_EDIT category provide atom level editing instructions to be applied to imported chemical components.

getPdbxChemCompAtomFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_ATOM_FEATURE category provide a selected list of atom level features for the chemical component.

getPdbxChemCompAtomRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

PDBX_CHEM_COMP_ATOM_RELATED provides atom level nomenclature mapping between two related chemical components.

getPdbxChemCompAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_AUDIT category records the status and tracking information for this component.

getPdbxChemCompBondEdit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_BOND_EDIT category provide bond level editing instructions to be applied to imported chemical components.

getPdbxChemCompDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_DEPOSITOR_INFO category record additional details provided by depositors about deposited chemical components.

getPdbxChemCompDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_DESCRIPTOR category provide string descriptors of component chemical structure.

getPdbxChemCompFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Additional features associated with the chemical component.

getPdbxChemCompIdentifier() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_IDENTIFIER category provide identifiers for chemical components.

getPdbxChemCompImport() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_IMPORT category identify existing chemical components to be imported into the current component definition.

getPdbxChemCompInstanceDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_INSTANCE_DEPOSITOR_INFO category records depositor provided information about the chemical context of component instances.

getPdbxChemCompModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_MODEL category give details about each of the chemical component model instances.

getPdbxChemCompModelAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_MODEL_ATOM category record coordinates for the chemical component model instance.

getPdbxChemCompModelAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_MODEL_AUDIT category records the status and tracking information for this component model instance.

getPdbxChemCompModelBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_MODEL_BOND category record details about the bonds between atoms in a chemical component model instance.

getPdbxChemCompModelDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the CHEM_COMP_MODEL_DESCRIPTOR category provide string descriptors for component model structures.

getPdbxChemCompModelFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Additional features associated with the chemical component.

getPdbxChemCompModelReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Additional features associated with the chemical component.

getPdbxChemCompNonstandard() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_NONSTANDARD category describes common nucleotide modifications and nonstandard features.

getPdbxChemCompRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

PDBX_CHEM_COMP_RELATED describes the relationship between two chemical components.

getPdbxChemCompSubcomponentEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_chem_comp_subcomponent_entity_list category list the constituent chemical entities and entity features in this chemical component.

getPdbxChemCompSubcomponentStructConn() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_chem_comp_subcomponent_struct_conn list the chemical interactions among the subcomponents in the chemical component.

getPdbxChemCompSynonyms() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

PDBX_CHEM_COMP_SYNONYMS holds chemical name and synonym correspondences.

getPdbxChemCompUploadDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CHEM_COMP_UPLOAD_DEPOSITOR_INFO category record details of the uploaded files related to depositor provided chemical assignments.

getPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

Overall Chi-squared statistic for the data set.

getPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.Reflns

Overall Chi-squared statistic.

getPdbxChiSquared() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

Chi-squared statistic for this resolution shell.

getPdbxClass1() - Method in class org.rcsb.cif.schema.mm.ChemComp

Internal classifier used to organize ligand dictionary (broad chemical class).

getPdbxClass2() - Method in class org.rcsb.cif.schema.mm.ChemComp

Internal classifier used to organize ligand dictionary (notable chemical features).

getPdbxCodeNDB() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the NDB.

getPdbxCodePDB() - Method in class org.rcsb.cif.schema.mm.Database

The code assigned by the PDB.

getPdbxCollectionDate() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The date of data collection.

getPdbxCollectionTimeTotal() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The total number of seconds required to measure this data set.

getPdbxColorBlue() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

Gives rgb color code of this strand.

getPdbxColorGreen() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

Gives rgb color code of this strand.

getPdbxColorRed() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

Gives rgb color code of this strand.

getPdbxColumninfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

getPdbxComponentAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The atom identifier in the subcomponent where a larger component has been divided subcomponents.

getPdbxComponentCompId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The component identifier for the subcomponent where a larger component has been divided subcomponents.

getPdbxComponentEntityId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A reference to entity identifier in data category pdbx_chem_comp_subcomponent_entity_list.

getPdbxComponentId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A reference to _pdbx_reference_entity_list.component_id

getPdbxComponentId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

Record number of the NCS domain limit assignment.

getPdbxComponentNo() - Method in class org.rcsb.cif.schema.mm.ChemComp

A serial number used by PDB in the FORMUL record.

getPdbxCompType() - Method in class org.rcsb.cif.schema.mm.ChemComp

A type classification of this chemical component.

getPdbxConcFinal() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The concentration of this component in the final crystallization solution.

getPdbxConnect() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Local data items describing ligand and monomer chemical features.

getPdbxConnectAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Local data items describing ligand and monomer atom names and connectivity.

getPdbxConnectModification() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Local data items describing ligand and monomer modifications.

getPdbxConnectType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Local data items describing ligand and monomer type information.

getPdbxConstruct() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CONSTRUCT category specify a sequence of nucleic acids or amino acids.

getPdbxConstructFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CONSTRUCT_FEATURE category may be used to specify various properties of a nucleic acid sequence used during protein production.

getPdbxContactAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CONTACT_AUTHOR category record details about the name and address of the author to be contacted concerning the contents of this data block.

getPdbxCoord() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Gives information about what kind of coordinates are available.

getPdbxCoordinateModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The details of the composition of the coordinate model.

getPdbxCosPhaseCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The cosine of the calculated phase

getPdbxCrystalAlignment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data in the PDBX_CRYSTAL_ALIGNMENT are produced by log files from programs during indexing

getPdbxCrystalDiffrnLifetime() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The measured diffraction limit for this crystal.

getPdbxCrystalDiffrnLimit() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The measured diffraction limit for this crystal.

getPdbxCrystalDirection1() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The crystal size along the first measured direction in millimeters.

getPdbxCrystalDirection2() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The crystal size along the second measured direction in millimeters.

getPdbxCrystalDirection3() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The crystal size along the third measured direction in millimeters.

getPdbxCrystalImage() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

A code to indicate that a crystal image is available for this crystal.

getPdbxCrystalImageFormat() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The image format for the file containing the image of crystal specified as an RFC2045/RFC2046 mime type.

getPdbxCrystalImageUrl() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The URL for an a file containing the image of crystal.

getPdbxCTerminalSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.EntityPoly

C-terminal cloning artifacts and/or HIS tag.

getPdbxCultureCollection() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Culture Collection identifier.

getPdbxDatabaseIdDOI() - Method in class org.rcsb.cif.schema.mm.Citation

Document Object Identifier used by doi.org to uniquely specify bibliographic entry.

getPdbxDatabaseIdPubMed() - Method in class org.rcsb.cif.schema.mm.Citation

Ascession number used by PubMed to categorize a specific bibliographic entry.

getPdbxDatabaseMessage() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_DATABASE_MESSAGE category provides information about correspondance related to a structure deposition.

getPdbxDatabasePDBMaster() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_DATABASE_PDB_MASTER category provides placeholders for the count of various PDB record types.

getPdbxDatabasePDBObsSpr() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_DATABASE_PDB_OBS_SPR category provides placeholders for information on obsolete/superseded PDB entries

getPdbxDatabasePdbOmit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DATABASE_PDB_OMIT category record list PDB record names that should be omitted in the PDB format file.

getPdbxDatabaseProc() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Internal records to track the data processing cycle.

getPdbxDatabaseRelated() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in PDBX_DATABASE_RELATED contain references to entries that are related to the this entry.

getPdbxDatabaseRemark() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DATABASE_REMARK category record keep additional information about the entry.

getPdbxDatabaseStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

These are internal RCSB records to keep track of data processing and status of the entry.

getPdbxDatabaseStatusHistory() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The pdbx_database_status_history category records the time evolution of entry processing status.

getPdbxDataCutoffHighAbsF() - Method in class org.rcsb.cif.schema.mm.Refine

Value of F at "high end" of data cutoff.

getPdbxDataCutoffHighRmsAbsF() - Method in class org.rcsb.cif.schema.mm.Refine

Value of RMS |F| used as high data cutoff.

getPdbxDataCutoffLowAbsF() - Method in class org.rcsb.cif.schema.mm.Refine

Value of F at "low end" of data cutoff.

getPdbxDataProcessingCell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Crystallographic cell specifications used in data processing.

getPdbxDataProcessingDetector() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Details of the detector used at data collection site.

getPdbxDataProcessingReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Details of reflections used in data processing.

getPdbxDataProcessingStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DATA_PROCESSING_STATUS category record data processing instructions for workflow processing tasks.

getPdbxDataReductionDs() - Method in class org.rcsb.cif.schema.mm.Computing

Program/package name for data reduction/data scaling

getPdbxDataReductionIi() - Method in class org.rcsb.cif.schema.mm.Computing

Program/package name for data reduction/intensity integration software

getPdbxDate() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

The date of data measurement

getPdbxDbAccession() - Method in class org.rcsb.cif.schema.mm.StructRef

Accession code assigned by the reference database.

getPdbxDbAccession() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Accession code of the reference database.

getPdbxDbAlignBegInsCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Initial insertion code of the sequence segment of the reference database.

getPdbxDbAlignEndInsCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Ending insertion code of the sequence segment of the reference database.

getPdbxDbIsoform() - Method in class org.rcsb.cif.schema.mm.StructRef

Database code assigned by the reference database for a sequence isoform.

getPdbxDbref() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

These records are used in the DBREF record of a PDB file and are used as place holders for NDB ID's in PDB files.

getPdbxDccDensity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record various overall metrics calculated by DCC and various wrapped programs (such as Xtriage, pointless, REFMAC ...).

getPdbxDccDensityCorr() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record calculated metrics from various programs (such as phenix, refmac, cns, sfcheck).

getPdbxDccGeometry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record the overall deviations about geometry (such as bond length, angle, dihedral, chirality, planarity).

getPdbxDccMap() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record residual map properties such as Real Space electron density Correlation Coefficient (RSCC), real space R factors (RSR) and the Zscores for each residue, the main/side chains.

getPdbxDccMapman() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record details from the output of mapman used by the DCC program.

getPdbxDccRsccMapman() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in this category record residual map properties such as correlation, real space Rfactors and the Zscore calculated from refmac and mapman.

getPdbxDccRsccMapmanOverall() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the category record overall map properties such as correlation, real space Rfactors and the Zscore calculated from refmac and mapman.

getPdbxDELFWT() - Method in class org.rcsb.cif.schema.mm.Refln

The weighted structure factor amplitude for the mFo-DFc map.

getPdbxDELPHWT() - Method in class org.rcsb.cif.schema.mm.Refln

The weighted phase for the mFo-DFc map.

getPdbxDensityCorrelation() - Method in class org.rcsb.cif.schema.mm.Refine

The density correlation coefficient is calculated from atomic densities of (2Fobs-Fcalc) map - "Robs" and the model map (Fcalc) - "Rcalc" : D_corr = <Robs><Rcalc>/sqrt(<Robs**2><Rcalc**2>) where <Robs> is the mean of "observed" densities of all atoms <Rcalc> is the mean of "calculated" densities of all atoms.

getPdbxDepositGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_deposit_group category provide identifiers and related information for groups of entries deposited in a collection.

getPdbxDepositGroupIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_deposit_group_index category provides details about the individual data files in the collection of deposited entries.

getPdbxDepositionMessageFileReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPOSITION_MESSAGE_FILE_REFERENCE category record details of files references associated with messages defined in the PDBX_DEPOSITION_MESSAGE_INFO data category.

getPdbxDepositionMessageInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPOSITION_MESSAGE_INFO category record internal messages within the depositon and annotation system.

getPdbxDepuiEntityFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_ENTITY_FEATURES category record status details related to the features of individual entities.

getPdbxDepuiEntityStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_ENTITY_STATUS_FLAGS category record status details related to individual entities.

getPdbxDepuiEntryDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_ENTRY_DETAILS category record information required to identify the depositor and route deposition to an appropriate processing site.

getPdbxDepuiStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_STATUS_FLAGS category record status details used to maintain state within the wwPDB deposition system.

getPdbxDepuiUpload() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_UPLOAD category record the details of uploaded data files.

getPdbxDepuiValidationStatusFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DEPUI_VALIDATION_STATUS_FLAGS category record status details that assess the status of selected validation diagnostics.

getPdbxDescription() - Method in class org.rcsb.cif.schema.mm.Entity

A description of the entity.

getPdbxDescription() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Information on the source which is not given elsewhere.

getPdbxDescriptor() - Method in class org.rcsb.cif.schema.mm.Struct

An automatically generated descriptor for an NDB structure or the unstructured content of the PDB COMPND record.

getPdbxDetails() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

Text description of crystal growth procedure.

getPdbxDetails() - Method in class org.rcsb.cif.schema.mm.Struct

Additional remarks related to this structure deposition that have not been included in details data items elsewhere.

getPdbxDetails() - Method in class org.rcsb.cif.schema.mm.StructKeywords

Keywords describing this structure.

getPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.Refine

An identifier for the diffraction data set used in this refinement.

getPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.Refln

An optional identifier for the diffraction data set containing this reflection.

getPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.Reflns

An identifier for the diffraction data set for this set of summary statistics.

getPdbxDiffrnId() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

An identifier for the diffraction data set corresponding to this resolution shell.

getPdbxDiffrnProtocol() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

SINGLE WAVELENGTH, LAUE, or MAD.

getPdbxDiffrnReflnsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the DIFFRN_REFLNS_SHELL category record details about the reflection data set within shells of resolution.

getPdbxDistantSolventAtoms() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DISTANT_SOLVENT_ATOMS category list the solvent atoms remote from any macromolecule.

getPdbxDistValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

The linkage distance in angstroms.

getPdbxDistValue() - Method in class org.rcsb.cif.schema.mm.StructConn

Distance value for this contact.

getPdbxDOI() - Method in class org.rcsb.cif.schema.mm.Entry

Document Object Identifier (DOI) for this entry registered with http://crossref.org.

getPdbxDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DOMAIN category record information about domain definitions.

getPdbxDomainRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DOMAIN_RANGE category identify the beginning and ending points of polypeptide chain segments that form all or part of a domain.

getPdbxDOpt() - Method in class org.rcsb.cif.schema.mm.Reflns

The optical resolution of the data set, d(opt), is the expected minimum distance between two resolved peaks in an electron-density map.

getPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The highest resolution for the interplanar spacings in the reflection data set.

getPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_d_res_high records the highest resolution for MAD phasing.

getPdbxDResHigh() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The smallest value in angstroms for the interplanar spacings for the reflections in this shell.

getPdbxDResHighOpt() - Method in class org.rcsb.cif.schema.mm.Reflns

The highest optical resolution for this reflection data set as determined by computational method _reflns.pdbx_d_res_opt_method.

getPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The lowest resolution for the interplanar spacings in the reflection data set.

getPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_d_res_low records the lowest resolution for MAD phasing.

getPdbxDResLow() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The highest value in angstroms for the interplanar spacings for the reflections in this shell.

getPdbxDResLowOpt() - Method in class org.rcsb.cif.schema.mm.Reflns

The lowest optical resolution for this reflection data set as determined by computational method _reflns.pdbx_d_res_opt_method.

getPdbxDResOptMethod() - Method in class org.rcsb.cif.schema.mm.Reflns

The computational method used to determine the optical resolution limits _reflns.pdbx_d_res_high_opt and _reflns.pdbx_d_res_low_opt.

getPdbxDrugInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_DRUG_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

getPdbxEc() - Method in class org.rcsb.cif.schema.mm.Entity

Enzyme Commission (EC) number(s)

getPdbxEc() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

Enzyme Commission (EC) number(s)

getPdbxEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructConf

A component of the identifier for the residue at which the conformation segment ends.

getPdbxEndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

A component of the identifier for the residue at which the beta sheet range ends.

getPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The ending polymer sequence position for the polymer section corresponding to this source.

getPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The ending polymer sequence position for the polymer section corresponding to this source.

getPdbxEndSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

The ending polymer sequence position for the polymer section corresponding to this source.

getPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

This is a unique identifier for a collection NCS related domains.

getPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.StructNcsDom

This is a unique identifier for a collection NCS related domains.

getPdbxEnsId() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

This is a unique identifier for a collection NCS related domains.

getPdbxEntitiesPerBiologicalUnit() - Method in class org.rcsb.cif.schema.mm.Entity

Number of entity molecules in the biological assembly.

getPdbxEntityAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_ENTITY_ASSEMBLY category provides a chemical description of the biological assembly studied in terms of its constituent entities.

getPdbxEntityBranch() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_BRANCH category specify the list of branched entities and the type.

getPdbxEntityBranchDescriptor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_BRANCH_DESCRIPTOR category provide string descriptors of entity chemical structure.

getPdbxEntityBranchLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_BRANCH_LINK category give details about the linkages between components within a branched entity.

getPdbxEntityBranchList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_BRANCH_LIST category specify the list of monomers in a branched entity.

getPdbxEntityFuncBindMode() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_FUNC_BIND_MODE category describe characteristics of protein oligonucleotide binding.

getPdbxEntityFuncEnzyme() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_FUNC_ENZYME category describe characteristics of protein oligonucleotide binding in which the binding mode is enzymatic.

getPdbxEntityFuncOther() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_FUNC_OTHER category describe characteristics of protein oligonucleotide binding in which the binding mode is not classified.

getPdbxEntityFuncRegulatory() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_FUNC_REGULATORY category describe characteristics of protein oligonucleotide binding in which the binding mode is regulatory.

getPdbxEntityFuncStructural() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_FUNC_STRUCTURAL category describe characteristics of protein oligonucleotide binding in which the binding mode is structural.

getPdbxEntityInstanceFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_entity_instance_feature category records special features of selected entity instances.

getPdbxEntityName() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_ENTITY_NAME records additional name information for each entity.

getPdbxEntityNameInstance() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_NAME_INSTANCE category list names used to define entities with their associated database, entity, chain, and molecule identifiers.

getPdbxEntityNameTaxonomy() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_NAME_TAXONOMY category define the names and synonyms of the entity name taxonomy.

getPdbxEntityNameTaxonomyTree() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_NAME_TAXONOMY_TREE category define the tree structure of the entity name taxonomy.

getPdbxEntityNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

getPdbxEntityPolyCompLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_POLY_COMP_LINK_LIST category enumerate the the linkages between components within the polymer entity.

getPdbxEntityPolyDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_POLY_DOMAIN category specify domains of monomers within a polymer.

getPdbxEntityPolyNaNonstandard() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_POLY_NA_NONSTANDARD category describe the nonstandard features of the nucleic acid polymer entities.

getPdbxEntityPolyNaType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_POLY_NA_TYPE category describe type of nucleic acid polymer entities.

getPdbxEntityPolyProteinClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_POLY_PROTEIN_CLASS category provides a top-level protein classification.

getPdbxEntityProdProtocol() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains descriptive protocols for the production of this entity.

getPdbxEntitySrcGenCharacter() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details of protein characterisation.

getPdbxEntitySrcGenChrom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the chromatographic steps used in the purification of the protein.

getPdbxEntitySrcGenClone() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the cloning steps used in the overall protein production process.

getPdbxEntitySrcGenCloneLigation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the ligation-based cloning steps used in the overall protein production process.

getPdbxEntitySrcGenCloneRecombination() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the recombination-based cloning steps used in the overall protein production process.

getPdbxEntitySrcGenDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTITY_SRC_GEN_DEPOSITOR_INFO category record details of the source from which the entity was obtained in cases where the source was genetically manipulated.

getPdbxEntitySrcGenExpress() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the EXPRESSION steps used in the overall protein production process.

getPdbxEntitySrcGenExpressTimepoint() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for OD time series used to monitor a given EXPRESSION step used in the overall protein production process.

getPdbxEntitySrcGenFract() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the fraction steps used in the overall protein production process.

getPdbxEntitySrcGenLysis() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the cell lysis steps used in the overall protein production process.

getPdbxEntitySrcGenProdDigest() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the DIGEST steps used in the overall protein production process.

getPdbxEntitySrcGenProdOther() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for process steps that are not explicitly catered for elsewhere.

getPdbxEntitySrcGenProdOtherParameter() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains parameters and values required to capture information about a particular process step

getPdbxEntitySrcGenProdPcr() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the PCR steps used in the overall protein production process.

getPdbxEntitySrcGenProteolysis() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the protein purification tag removal steps used in the overall protein production process

getPdbxEntitySrcGenPure() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the final purified protein product.

getPdbxEntitySrcGenRefold() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains details for the refolding steps used in the overall protein production process.

getPdbxEntitySrcSyn() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The data items in category PDBX_ENTITY_SRC_SYN record the source details about chemically synthesized molecules.

getPdbxEntryDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ENTRY_DETAILS category provide additional details about this entry.

getPdbxEvidenceCode() - Method in class org.rcsb.cif.schema.mm.StructSite

Source of evidence supporting the assignment of this site.

getPdbxExplicitLinkingFlag() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A flag to indicate that linking data is explicitly provided for this polymer in the PDBX_ENTITY_POLY_COMP_LINK_LIST category

getPdbxExptlCrystalCryoTreatment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_EXPTL_CRYSTAL_CRYO_TREATMENT category record details cryogenic treatments applied to this crystal.

getPdbxExptlCrystalGrowComp() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_EXPTL_CRYSTAL_GROW_COMP category record details about the components of the solutions that were 'mixed' to produce the crystal.

getPdbxExptlCrystalGrowSol() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_EXPTL_CRYSTAL_GROW_SOL category record details about the solutions that were 'mixed' to produce the crystal.

getPdbxExptlPd() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_exptl_pd record information about powder sample preparations.

getPdbxFamilyGroupIndex() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FAMILY_GROUP_INDEX category record the family membership in family groups.

getPdbxFamilyPrdAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FAMILY_PRD_AUDIT category records the status and tracking information for this family.

getPdbxFCalcPartSolvent() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the structure factor in arbitrary units reflecting only the contribution of the solvent model.

getPdbxFCalcWithSolvent() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated value of the structure factor in arbitrary units including the contribution of the solvent model.

getPdbxFDoublePrimeRefined() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

record the refined f_double_prime (not from experiment).

getPdbxFeatureAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FEATURE_ASSEMBLY category records information about properties pertaining to this structural assembly.

getPdbxFeatureDomain() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FEATURE_DOMAIN category records information about properties pertaining to this structure domain.

getPdbxFeatureEntry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FEATURE_ENTRY category records information about properties pertaining to this structure entry.

getPdbxFeatureMonomer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FEATURE_MONOMER category records information about properties pertaining to particular monomers in this structure.

getPdbxFeatureSequenceRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_FEATURE_SEQUENCE_RANGE category records information about properties pertaining to this structure sequence_range.

getPdbxFiberCoordinate() - Method in class org.rcsb.cif.schema.mm.Refln

The coordinate position in reciprocal space along the fiber layer line for this reflection.

getPdbxFiberFMeasAu() - Method in class org.rcsb.cif.schema.mm.Refln

The measured diffraction amplitude for this fiber reflection in arbitrary units.

getPdbxFiberLayer() - Method in class org.rcsb.cif.schema.mm.Refln

The fiber layer line for this reflection.

getPdbxFMinus() - Method in class org.rcsb.cif.schema.mm.Refln

The structure factor F(-h,-k,-l) of the Friedel pair.

getPdbxFMinusSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the structure factor F(-h,-k,-l) of the Friedel pair.

getPdbxFom() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_fom records the figure of merit for MAD phasing.

getPdbxFom() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record figure of merit obtained from all data for each derivative.

getPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_fom_acentric records the figure of merit using acentric data for MAD phasing.

getPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record figure of merit obtained from acentric data for each derivative.

getPdbxFomAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record figure of merit obtained from acentric data for each derivative, but broken into resolution shells

getPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_fom_centric records the figure of merit using centric data for MAD phasing.

getPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record figure of merit obtained from centric data for each derivative.

getPdbxFomCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record figure of merit obtained from centric data for each derivative, but broken into resolution shells

getPdbxFormalCharge() - Method in class org.rcsb.cif.schema.mm.AtomSite

The net integer charge assigned to this atom.

getPdbxFormalCharge() - Method in class org.rcsb.cif.schema.mm.ChemComp

The net integer charge assigned to this component.

getPdbxFormulaWeight() - Method in class org.rcsb.cif.schema.mm.Struct

Estimated formula mass in daltons of the deposited structure assembly.

getPdbxFormulaWeight() - Method in class org.rcsb.cif.schema.mm.StructBiol

Estimated formula mass in daltons of the biological assembly.

getPdbxFormulaWeightExptl() - Method in class org.rcsb.cif.schema.mm.Entity

Experimentally determined formula mass in daltons of the entity

getPdbxFormulaWeightExptlMethod() - Method in class org.rcsb.cif.schema.mm.Entity

Method used to determine _entity.pdbx_formula_weight_exptl.

getPdbxFormulaWeightMethod() - Method in class org.rcsb.cif.schema.mm.Struct

Method used to determine _struct.pdbx_formula_weight.

getPdbxFormulaWeightMethod() - Method in class org.rcsb.cif.schema.mm.StructBiol

Method used to determine _struct_biol.pdbx_formula_weight.

getPdbxFPlus() - Method in class org.rcsb.cif.schema.mm.Refln

The structure factor F(h,k,l) of the Friedel pair.

getPdbxFPlusSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the structure factor F(h,k,l) of the Friedel pair.

getPdbxFPrimeRefined() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

record the refined f_prime (not from experiment).

getPdbxFractionPerAsymUnit() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item indicates wheather the structural elements exists only as part of its whole molecule in the asymmetric unit.

getPdbxFragment() - Method in class org.rcsb.cif.schema.mm.Entity

Entity fragment description(s).

getPdbxFragment() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

Entity fragment description(s).

getPdbxFragment() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

A domain or fragment of the molecule.

getPdbxFramesTotal() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The total number of data frames collected for this data set.

getPdbxFrequency() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The operating frequency of the detector (Hz) used in data collection.

getPdbxFscFree() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Fourier Shell Correlation (FSC) between model and observed structure factors for reflections not included in refinement.

getPdbxFscWork() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Fourier Shell Correlation (FSC) between model and observed structure factors for reflections included in refinement.

getPdbxFullSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.Symmetry

Used for PDB space group: Example: 'C 1 2 1' (instead of C 2) 'P 1 2 1' (instead of P 2) 'P 1 21 1' (instead of P 21) 'P 1 1 21' (instead of P 21 -unique C axis) 'H 3' (instead of R 3 -hexagonal) 'H 3 2' (instead of R 3 2 -hexagonal)

getPdbxFullSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

This item expresses category _struct_biol_gen.symmetry on an X, Y and Z basis.

getPdbxFWT() - Method in class org.rcsb.cif.schema.mm.Refln

The weighted structure factor amplitude for the 2mFo-DFc map.

getPdbxGeneSrcAtcc() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

American Type Culture Collection tissue culture number.

getPdbxGeneSrcCell() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Cell type.

getPdbxGeneSrcCellLine() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The specific line of cells.

getPdbxGeneSrcCellularLocation() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the location inside (or outside) the cell.

getPdbxGeneSrcCultureCollection() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Culture collection identifier.

getPdbxGeneSrcFragment() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A domain or fragment of the molecule.

getPdbxGeneSrcGene() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the gene.

getPdbxGeneSrcNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

NCBI Taxonomy identifier for the gene source organism.

getPdbxGeneSrcOrgan() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Organized group of tissues that carries on a specialized function.

getPdbxGeneSrcOrganelle() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Organized structure within cell.

getPdbxGeneSrcPlasmid() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The source plasmid.

getPdbxGeneSrcPlasmidName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The source plasmid.

getPdbxGeneSrcScientificName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Scientific name of the organism.

getPdbxGeneSrcVariant() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the variant.

getPdbxGroupNDB() - Method in class org.rcsb.cif.schema.mm.AtomSite

The ATOM group code used by the NDB.

getPdbxHelicalSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_HELICAL_SYMMETRY category record details about the helical symmetry group associated with this entry.

getPdbxHelicalSymmetryDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_HELICAL_SYMMETRY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_HELICAL_SYMMETRY.

getPdbxHLAIso() - Method in class org.rcsb.cif.schema.mm.Refln

The isomorphous Hendrickson-Lattman coefficient A~iso~ for this reflection.

getPdbxHLBIso() - Method in class org.rcsb.cif.schema.mm.Refln

The isomorphous Hendrickson-Lattman coefficient B~iso~ for this reflection.

getPdbxHLCIso() - Method in class org.rcsb.cif.schema.mm.Refln

The isomorphous Hendrickson-Lattman coefficient C~iso~ for this reflection.

getPdbxHLDIso() - Method in class org.rcsb.cif.schema.mm.Refln

The isomorphous Hendrickson-Lattman coefficient D~iso~ for this reflection.

getPdbxHostOrgAtcc() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Americal Tissue Culture Collection of the expression system.

getPdbxHostOrgCell() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Cell type from which the gene is derived.

getPdbxHostOrgCellLine() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A specific line of cells used as the expression system.

getPdbxHostOrgCellularLocation() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the location inside (or outside) the cell which expressed the molecule.

getPdbxHostOrgCultureCollection() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Culture collection of the expression system.

getPdbxHostOrgGene() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Specific gene which expressed the molecule.

getPdbxHostOrgNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

NCBI Taxonomy identifier for the expression system organism.

getPdbxHostOrgOrgan() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Specific organ which expressed the molecule.

getPdbxHostOrgOrganelle() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Specific organelle which expressed the molecule.

getPdbxHostOrgScientificName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The scientific name of the organism that served as host for the production of the entity.

getPdbxHostOrgStrain() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The strain of the organism in which the entity was expressed.

getPdbxHostOrgTissue() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The specific tissue which expressed the molecule.

getPdbxHostOrgTissueFraction() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The fraction of the tissue which expressed the molecule.

getPdbxHostOrgVariant() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Variant of the organism used as the expression system.

getPdbxHostOrgVector() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the vector used.

getPdbxHostOrgVectorType() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

Identifies the type of vector used (plasmid, virus, or cosmid).

getPdbxHybrid() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_HYBRID category are used to describe the chimeric characteristics of a DNA/RNA structure.

getPdbxId() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

ordinal index

getPdbxIdealCoordinatesDetails() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item identifies the source of the ideal coordinates in the component definition.

getPdbxIdealCoordinatesMissingFlag() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item identifies if ideal coordinates are missing in this definition.

getPdbxIMinus() - Method in class org.rcsb.cif.schema.mm.Refln

The intensity of the I(-h,-k,-l) partner of the Friedel pair.

getPdbxIMinusSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the intensity I(-h,-k,-l) partner of the Friedel pair.

getPdbxInhibitorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_INHIBITOR_INFO category are still used until the 'entity' categories are entered into the database, even though the inhibitor is repeated.

getPdbxInitialDate() - Method in class org.rcsb.cif.schema.mm.ChemComp

Date component was added to database.

getPdbxIonInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_ION_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

getPdbxIPlus() - Method in class org.rcsb.cif.schema.mm.Refln

The intensity of the I(h,k,l) partner of the Friedel pair.

getPdbxIPlusSigma() - Method in class org.rcsb.cif.schema.mm.Refln

The standard uncertainty (derived from measurement) of the intensity I(h,k,l) partner of the Friedel pair.

getPdbxIsotropicThermalModel() - Method in class org.rcsb.cif.schema.mm.Refine

Whether the structure was refined with indvidual isotropic, anisotropic or overall temperature factor.

getPdbxKeywords() - Method in class org.rcsb.cif.schema.mm.StructKeywords

Terms characterizing the macromolecular structure.

getPdbxLabelAltId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.label_alt_id.

getPdbxLabelAsymId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.label_asym_id

getPdbxLabelAsymId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.label_asym_id.

getPdbxLabelAtomId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.label_atom_id

getPdbxLabelCompId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.label_comp_id

getPdbxLabelCompId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.label_comp_id.

getPdbxLabelInsCode() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

NDB INSERTION CODE

getPdbxLabelSeqId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.label_seq_id

getPdbxLabelSeqId2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.label_seq_id

getPdbxLabelSeqNum() - Method in class org.rcsb.cif.schema.mm.AtomSite

Sequential residue number used by NDB.

getPdbxLeavingAtomFlag() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A flag indicating a leaving atom.

getPdbxLeavingAtomFlag() - Method in class org.rcsb.cif.schema.mm.StructConn

This data item identifies if the linkage has displaced leaving atoms on both, one or none of the connected atoms forming the linkage.

getPdbxLinkedEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_LINKED_ENTITY category record information about molecules composed of linked entities.

getPdbxLinkedEntityInstanceList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_LINKED_ENTITY_INSTANCE_LIST category identify instance molecules represented as linked entities within an entry.

getPdbxLinkedEntityLinkList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_LINKED_ENTITY_LINK_LIST category give details about the linkages with molecules represented as linked entities.

getPdbxLinkedEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_LINKED_ENTITY_LIST category record the list of entity constituents for this molecule.

getPdbxLoc() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_loc records lack of closure for MAD phasing.

getPdbxLoc() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record lack of closure obtained from all data for each derivative.

getPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_loc_acentric records lack of closure using acentric data for MAD phasing.

getPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record lack of closure obtained from acentric data for each derivative.

getPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record lack of closure obtained from acentric data for each derivative, but broken into resolution shells

getPdbxLocAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record lack of closure from acentric reflection for each shell.

getPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_loc_centric records lack of closure using centric data for MAD phasing.

getPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record lack of closure obtained from centric data for each derivative.

getPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record lack of closure obtained from centric data for each derivative, but broken into resolution shells

getPdbxLocCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record lack of closure from centric reflection for each shell.

getPdbxLsCrossValidMethod() - Method in class org.rcsb.cif.schema.mm.Refine

Whether the cross validataion method was used through out or only at the end.

getPdbxLsSigmaF() - Method in class org.rcsb.cif.schema.mm.Refine

Data cutoff (SIGMA(F))

getPdbxLsSigmaFsqd() - Method in class org.rcsb.cif.schema.mm.Refine

Data cutoff (SIGMA(F^2))

getPdbxLsSigmaI() - Method in class org.rcsb.cif.schema.mm.Refine

Data cutoff (SIGMA(I))

getPdbxLuzzatiDResHighObs() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

record the high resolution for calculating Luzzati statistics.

getPdbxMethodToDetermineStruct() - Method in class org.rcsb.cif.schema.mm.Refine

Method(s) used to determine the structure.

getPdbxMissingAtomNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_MISSING_ATOM_NONPOLY category list the atoms missing in nonpolymer residues.

getPdbxMissingAtomPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_MISSING_ATOM_POLY category lists atoms missing in polymer residues.

getPdbxMissingNumBeginOfChainInSeqres() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item provides the information of how many residues which do appear in the SEQRES record are missing at the beginning of the strand.

getPdbxMissingNumBeginOfChainNotInSeqres() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item provides the information of how many residues which do not appear in the SEQRES record are missing at the beginning of the strand.

getPdbxMissingNumEndOfChainNotInSeqres() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item provides the information of how many residues which do not appear in the SEQRES record are missing at the end of the strand.

getPdbxMissingResidueList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Provides a place-holder for PDB REMARK 465 data.

getPdbxModelCartnXIdeal() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative x component of the coordinates for this atom in this component specified as orthogonal angstroms.

getPdbxModelCartnYIdeal() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative y component of the coordinates for this atom in this component specified as orthogonal angstroms.

getPdbxModelCartnZIdeal() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

An alternative z component of the coordinates for this atom in this component specified as orthogonal angstroms.

getPdbxModelCoordinatesDbCode() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item identifies the PDB database code from which the heavy atom model coordinates were obtained.

getPdbxModelCoordinatesDetails() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item provides additional details about the model coordinates in the component definition.

getPdbxModelCoordinatesMissingFlag() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item identifies if model coordinates are missing in this definition.

getPdbxModelDetails() - Method in class org.rcsb.cif.schema.mm.Struct

Text description of the methodology which produced this model structure.

getPdbxModelTypeDetails() - Method in class org.rcsb.cif.schema.mm.Struct

A description of the type of structure model.

getPdbxModification() - Method in class org.rcsb.cif.schema.mm.Entity

Description(s) of any chemical or post-translational modifications

getPdbxModificationDetails() - Method in class org.rcsb.cif.schema.mm.ChemComp

For nonstandard components a text description of modification of the parent component.

getPdbxModified() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item indicates whether the structural elements are modified.

getPdbxModifiedDate() - Method in class org.rcsb.cif.schema.mm.ChemComp

Date component was last modified.

getPdbxMolecule() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_MOLECULE category identify reference molecules within a PDB entry.

getPdbxMoleculeFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_MOLECULE_FEATURES category record features of molecules within a PDB entry.

getPdbxMoleculeFeaturesDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_MOLECULE_FEATURES_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_MOLECULE_FEATURES.

getPdbxMonochromaticOrLaueML() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Monochromatic or Laue.

getPdbxMosaicity() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The of the distribution of mis-orientation angles specified in degrees of all the unit cells in the crystal.

getPdbxMosaicityEsd() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The uncertainty in the mosaicity estimate for the crystal.

getPdbxMutation() - Method in class org.rcsb.cif.schema.mm.Entity

Details about any entity mutation(s).

getPdbxMutation() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

Entity mutation description(s).

getPdbxNaStrandInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_NA_STRAND_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

getPdbxNaStructKeywds() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_NA_STRUCT_KEYWDS category record give details about structural features of the NA.

getPdbxNcbiTaxonomyId() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

NCBI Taxonomy identifier for the source organism.

getPdbxNcsDomId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The NCS domain to which the atom position is assigned.

getPdbxNElectrons() - Method in class org.rcsb.cif.schema.mm.AtomType

Number of electrons in atom used in scattering factor

getPdbxNetIOverAvSigmaI() - Method in class org.rcsb.cif.schema.mm.Reflns

The ratio of the average intensity to the average uncertainty, <I>/<sigma(I)>.

getPdbxNetIOverSigmaI() - Method in class org.rcsb.cif.schema.mm.Reflns

The mean of the ratio of the intensities to their standard uncertainties, <I/sigma(I)>.

getPdbxNetIOverSigmaIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The mean of the ratio of the intensities to their standard uncertainties of all reflections in the resolution shell.

getPdbxNetIOverSigmaIObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The mean of the ratio of the intensities to their standard uncertainties of observed reflections (see _reflns.observed_criterion) in the resolution shell.

getPdbxNewAsymId() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

This category gives the NDB strand ids for the complete biomolecule after it is generated.

getPdbxNewPdbAsymId() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

This data item is the PDB strand ID of the strand which will be generated.

getPdbxNmrAssignedChemShiftList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the assigned_chem_shift_list category provide information about a list of reported assigned chemical shift values.

getPdbxNmrChemShiftExperiment() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the chem_shift_experiment category provide pointers to the NMR experiments and samples used to collect the data for a set of reported assigned chemical shifts.

getPdbxNmrChemShiftRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_chem_shift_ref category provide the chemical shift referencing values used in assigning the chemical shift positions for peaks in spectral peak lists and assigned atom chemical shifts.

getPdbxNmrChemShiftReference() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the chem_shift_reference category define a set of chemical shift referencing parameters.

getPdbxNmrChemShiftSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the chem_shift_software category provide pointers to the software category and methods category.

getPdbxNmrComputing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The table in this section is used to describe the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

getPdbxNmrConstraintFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_constraint_file category record the name of the constraint file, the software used to calculate conformers with the constraint file, and the characteristics of the constraints in the constraint file.

getPdbxNmrConstraints() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This section provides a tabulation of constraint data.

getPdbxNmrDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Experimental details of the NMR study that have not been described elsewhere in this deposition.

getPdbxNmrEnsemble() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category contains the information that describes the ensemble of deposited structures.

getPdbxNmrEnsembleRms() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Structural statistics are derived from molecular dynamics and simulated annealing programs.

getPdbxNmrExptl() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

In this section, enter information on those experiments that were used to generate constraint data.

getPdbxNmrExptlSample() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The chemical constituents of each NMR sample.

getPdbxNmrExptlSampleConditions() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The experimental conditions used to for each sample.

getPdbxNmrForceConstants() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The final force constants, including units, employed for the various experimental constraints, covalent geometry constraints, and the non-bonded interaction terms in the target function used for simulated annealing.

getPdbxNmrRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Describe the method and details of the refinement of the deposited structure.

getPdbxNmrRepresentative() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

An average structure is often calculated in addition to the ensemble, or one of the ensemble is selected as a representative structure.

getPdbxNmrSampleDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Complete description of each NMR sample, including the solvent system used.

getPdbxNmrSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Description of the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

getPdbxNmrSoftwareTask() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_software_task category provide information about software workflow in the NMR experiment.

getPdbxNmrSpectralDim() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the spectral_dim category describe the parameters of each dimension in the NMR experiment used to generate the spectral peak list.

getPdbxNmrSpectralPeakList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_spectral_peak_list category provide information about a list of reported spectral peak characteristic values.

getPdbxNmrSpectralPeakSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_spectral_peak_software category provide pointers to the software category and methods category where descriptions of software applications and methods can be found.

getPdbxNmrSpectrometer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The details about each spectrometer used to collect data for this deposition.

getPdbxNmrSystematicChemShiftOffset() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_systematic_chem_shift_offset category define chemical shift offsets that systematically affect all chemical shifts in a set of assigned chemical shifts for a specific nuclei.

getPdbxNmrUpload() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Items in the pdbx_nmr_upload category provide information about the data files uploaded by a depositor using the deposition system.

getPdbxNonpolyScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_NONPOLY_SCHEME category provides residue level nomenclature mapping for non-polymer entities.

getPdbxNonstandardList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The information in this category is exclusively used to store the HET records of a PDB file.

getPdbxNotInAsym() - Method in class org.rcsb.cif.schema.mm.AtomSite

Will identify with a 'Y' that this strand got generated.

getPdbxNotInAsym() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Will identify with a 'Y' that this strand got generated.

getPdbxNscnum() - Method in class org.rcsb.cif.schema.mm.ChemComp

NSC identifier for component.

getPdbxNTerminalSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.EntityPoly

N-terminal cloning artifacts and/or HIS tag.

getPdbxNumber() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

Records the number restraints in the contributing to the RMS statistic.

getPdbxNumberAnomalous() - Method in class org.rcsb.cif.schema.mm.Reflns

This item is the same as _reflns.number_obs, but applies to observed Friedel pairs only.

getPdbxNumberAnomalous() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

This item is a duplicate of _reflns_shell.number_unique_all, but only for the observed Friedel pairs.

getPdbxNumberAtomsCarb() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of carbohydrate atoms included in refinement

getPdbxNumberAtomsLigand() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of ligand atoms included in refinement

getPdbxNumberAtomsLipid() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of lipid atoms included in refinement

getPdbxNumberAtomsNucleicAcid() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of nucleic atoms included in refinement

getPdbxNumberAtomsProtein() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of protein atoms included in refinement

getPdbxNumberAtomsSolvent() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of solvent atoms used in refinement

getPdbxNumberAtomsTotal() - Method in class org.rcsb.cif.schema.mm.RefineHist

Number of atoms used in refinement

getPdbxNumberDataSets() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_loc records the number of data sets used for MAD phasing.

getPdbxNumberDerivatives() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The number of derivatives used in this phasing experiment.

getPdbxNumberMeasuredAll() - Method in class org.rcsb.cif.schema.mm.Reflns

Total number of measured reflections.

getPdbxNumberObs() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The number of reflections satisfying the observation criterion as in _diffrn_reflns.pdbx_observed_criterion

getPdbxNumberOfMolecules() - Method in class org.rcsb.cif.schema.mm.Entity

A place holder for the number of molecules of the entity in the entry.

getPdbxNumberResiduesTotal() - Method in class org.rcsb.cif.schema.mm.RefineHist

Total number of polymer residues included in refinement.

getPdbxNumberSubcomponents() - Method in class org.rcsb.cif.schema.mm.ChemComp

The number of subcomponents represented in this component.

getPdbxNumRes() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

Number of residues in the site.

getPdbxNumResidues() - Method in class org.rcsb.cif.schema.mm.StructSite

Number of residues in the site.

getPdbxObservedCriterion() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The criterion used to classify a reflection as 'observed'.

getPdbxOmegaAngle() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

omega torsion angle

getPdbxOrder() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item gives the order of the structural elements in the ATOM_SITE category.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.AuditAuthor

This data item defines the order of the author's name in the list of audit authors.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

Ordinal index for the component atom list.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

Ordinal index for the component bond list.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

An ordinal index for the list of NCS restraints.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.Reflns

An ordinal identifier for this set of reflection statistics.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

An ordinal identifier for this resolution shell.

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.Software

An ordinal index for this category

getPdbxOrdinal() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

A synthetic integer primary key for this category.

getPdbxOrgan() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Organized group of tissues that carries on a specialized function.

getPdbxOrganelle() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Organized structure within cell.

getPdbxOrganismScientific() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Scientific name of the organism of the natural source.

getPdbxOverallESUB() - Method in class org.rcsb.cif.schema.mm.Refine

Overall estimated standard uncertainties of thermal parameters based on Maximum likelihood residual.

getPdbxOverallESUML() - Method in class org.rcsb.cif.schema.mm.Refine

Overall estimated standard uncertainties of positional parameters based on Maximum likelihood residual.

getPdbxOverallESUR() - Method in class org.rcsb.cif.schema.mm.Refine

Overall estimated standard uncertainties of positional parameters based on R value.

getPdbxOverallESURFree() - Method in class org.rcsb.cif.schema.mm.Refine

Overall estimated standard uncertainties of positional parameters based on R free value.

getPdbxOverallPhaseError() - Method in class org.rcsb.cif.schema.mm.Refine

The overall phase error for all reflections after refinement using the current refinement target.

getPdbxOverallSURBlowDPI() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on the crystallographic R value, expressed in a formalism known as the dispersion precision indicator (DPI).

getPdbxOverallSURFreeBlowDPI() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on the crystallographic R-free value, expressed in a formalism known as the dispersion precision indicator (DPI).

getPdbxOverallSURFreeCruickshankDPI() - Method in class org.rcsb.cif.schema.mm.Refine

The overall standard uncertainty (estimated standard deviation) of the displacement parameters based on the crystallographic R-free value, expressed in a formalism known as the dispersion precision indicator (DPI).

getPdbxParentBiolId() - Method in class org.rcsb.cif.schema.mm.StructBiol

An identifier for the parent biological assembly if this biological unit is part of a complex assembly.

getPdbxParentEntityId() - Method in class org.rcsb.cif.schema.mm.Entity

An identifier for the parent entity if this entity is part of a complex entity.

getPdbxPDBAtomName() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB atom name.

getPdbxPDBAtomName() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

PDB atom name.

getPdbxPdbCompnd() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This is a place holder for the PDB COMPND.

getPdbxPDBHelixClass() - Method in class org.rcsb.cif.schema.mm.StructConf

This item is a place holder for the helix class used in the PDB HELIX record.

getPdbxPDBHelixId() - Method in class org.rcsb.cif.schema.mm.StructConf

A placeholder for the helix identifier of the PDB HELIX record.

getPdbxPDBHelixLength() - Method in class org.rcsb.cif.schema.mm.StructConf

A placeholder for the lengths of the helix of the PDB HELIX record.

getPdbxPDBId() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item is a pointer to _atom_site.pdbx_PDB_strand_id the ATOM_SITE category.

getPdbxPDBId() - Method in class org.rcsb.cif.schema.mm.StructConn

A placeholder for the PDB id in the case the category is used to hold the information of the MODRES record of a PDB file.

getPdbxPdbIdCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

The PDB ID code.

getPdbxPDBIdCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The PDB code of the structure.

getPdbxPdbInsCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

Insertion code in PDB sequence

getPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB insertion code.

getPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.pdbx_PDB_ins_code

getPdbxPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.pdbx_PDB_ins_code

getPdbxPDBInsCode2() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.pdbx_PDB_ins_code

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB model number.

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.GeomAngle

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.GeomBond

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.GeomContact

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBModelNum() - Method in class org.rcsb.cif.schema.mm.StructMonProtCis

Pointer to _atom_site.pdbx_PDB_model_num

getPdbxPDBOrder() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

An ordering index used to reproduce the presentation of chain order in the original PDB format data files.

getPdbxPDBResidueName() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB residue name.

getPdbxPDBResidueName() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

PDB residue name.

getPdbxPDBResidueNo() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB residue number.

getPdbxPDBResidueNo() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

PDB residue number.

getPdbxPdbSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This is a place holder for the PDB SOURCE.

getPdbxPdbStrandId() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

PDB strand/chain id.

getPdbxPDBStrandId() - Method in class org.rcsb.cif.schema.mm.AtomSite

PDB strand id.

getPdbxPDBStrandId() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

PDB strand id.

getPdbxPdFsqrdRFactor() - Method in class org.rcsb.cif.schema.mm.Refine

Residual factor R for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion.

getPdbxPdLsMatrixBandWidth() - Method in class org.rcsb.cif.schema.mm.Refine

The least squares refinement "band matrix" approximation to the full matrix.

getPdbxPdMarquardtCorrelationCoeff() - Method in class org.rcsb.cif.schema.mm.Refine

The correlation coefficient between the observed and calculated structure factors for reflections included in the refinement.

getPdbxPdMeasNumberOfPoints() - Method in class org.rcsb.cif.schema.mm.Refine

The total number of points in the measured diffractogram.

getPdbxPdNumberOfPoints() - Method in class org.rcsb.cif.schema.mm.Refine

The total number of data points in the processed diffractogram.

getPdbxPdNumberOfPowderPatterns() - Method in class org.rcsb.cif.schema.mm.Refine

The total number of powder patterns used.

getPdbxPdProcLsProfRFactor() - Method in class org.rcsb.cif.schema.mm.Refine

Rietveld/Profile fit R factors.

getPdbxPdProcLsProfWRFactor() - Method in class org.rcsb.cif.schema.mm.Refine

Rietveld/Profile fit R factors.

getPdbxPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The percentage of geometrically possible reflections represented by reflections that satisfy the resolution limits established by _diffrn_reflns.d_resolution_high and _diffrn_reflns.d_resolution_low and the observation limit established by _diffrn_reflns.observed_criterion.

getPdbxPhaseCalcPartSolvent() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated structure-factor phase in degrees reflecting only the contribution of the solvent model.

getPdbxPhaseCalcWithSolvent() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated structure-factor phase in degrees including the contribution of the solvent model.

getPdbxPhaseCycle() - Method in class org.rcsb.cif.schema.mm.Refln

The phasing cycle.

getPdbxPhaseError() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The average phase error for all reflections in the resolution shell.

getPdbxPhasingDm() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PHASING_DM category record details about density modification

getPdbxPhasingDmShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PHASING_DM_SHELL category record details about density modification in resolution shell.

getPdbxPhasingMADSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Record details about each phasing set: (Note: the phasing set is different from data set.

getPdbxPhasingMADSetShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The same as category pdbx_phasing_MAD_set, but broken into shells.

getPdbxPhasingMADSetSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

record the details (coordinates etc.) of anomalous scatters.

getPdbxPhasingMADShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PHASING_MAD_SHELL category record details about the phasing of the structure, when methods involving multiple anomalous dispersion techniques are involved (note: the values are overall, but broken down into shells of resolution)

getPdbxPhasingMR() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PHASING_MR category record details about molecular replacement.

getPdbxPHRange() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The range of pH values at which the crystal was grown.

getPdbxPHWT() - Method in class org.rcsb.cif.schema.mm.Refln

The weighted phase for the 2mFo-DFc map.

getPdbxPlasmidDetails() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Details about the plasmid.

getPdbxPlasmidName() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The plasmid containing the gene.

getPdbxPointSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_POINT_SYMMETRY category record details about the point symmetry group associated with this entry.

getPdbxPointSymmetryDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_POINT_SYMMETRY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_POINT_SYMMETRY.

getPdbxPolymerType() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

Is the atom in a polymer or non-polymer subcomponent in the BIRD definition.

getPdbxPolySeqScheme() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_POLY_SEQ_SCHEME category provides residue level nomenclature mapping for polymer entities.

getPdbxPostProcessDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_POST_PROCESS_DETAILS identify problems or errors encountered in the post-processing of this entry.

getPdbxPostProcessStatus() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_POST_PROCESS_DETAILS record the status of post-processed entries.

getPdbxPower() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_power records phasing power for MAD phasing.

getPdbxPower() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record phasing power for each derivative.

getPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_power_acentric records phasing power using acentric data for MAD phasing.

getPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record phasing power obtained from acentric data for each derivative, but broken into resolution shells

getPdbxPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record phasing power from acentric reflection for each shell.

getPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_power_centric records phasing power using centric data for MAD phasing.

getPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record phasing power obtained from centric data for each derivative, but broken into resolution shells

getPdbxPowerCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record phasing power from centric reflection for each shell.

getPdbxPrdAudit() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PRD_AUDIT category records the status and tracking information for this molecule.

getPdbxPrereleaseSeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

This category provides a placeholder for pre-release sequence information.

getPdbxProcessingSite() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item identifies the deposition site that processed this chemical component defintion.

getPdbxProteinInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_PROTEIN_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

getPdbxProvenance() - Method in class org.rcsb.cif.schema.mm.EntityNameCom

Provides the provenance of the name in the _entity_name_com.name field

getPdbxPseudoAtomDetails() - Method in class org.rcsb.cif.schema.mm.RefineHist

Details of pseduo atoms used to model unexplained density

getPdbxPtnr1AtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.StructConn

The chiral configuration of the first atom making the linkage.

getPdbxPtnr1AuthAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr1LeavingAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

The leaving atom that is removed from first atom making the linkage.

getPdbxPtnr1ModName() - Method in class org.rcsb.cif.schema.mm.StructConn

The abbreviation of the modifier group.

getPdbxPtnr1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr1ReplacedAtom() - Method in class org.rcsb.cif.schema.mm.StructConn

The name of the atom which got replaced by the modifier.

getPdbxPtnr1StandardCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A placeholder for the standard residue name found in the MODRES record of a PDB file.

getPdbxPtnr1SugarName() - Method in class org.rcsb.cif.schema.mm.StructConn

The abbreviation of the sugar modifier in the case it is a conformer of deoxyribose or ribose.

getPdbxPtnr2AtomStereoConfig() - Method in class org.rcsb.cif.schema.mm.StructConn

The chiral configuration of the second atom making the linkage.

getPdbxPtnr2AuthAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPdbxPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPdbxPtnr2LeavingAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

The leaving atom that is removed from second atom making the linkage.

getPdbxPtnr2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr3AuthAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3AuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3AuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3AuthCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3AuthInsCode() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3AuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr3LabelAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3LabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3LabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3LabelCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxPtnr3LabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPdbxPtnr3PDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 3 of the structure connection.

getPdbxRange1BegAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.auth_asym_id.

getPdbxRange1BegAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.auth_comp_id

getPdbxRange1BegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_asym_id.

getPdbxRange1BegLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_comp_id

getPdbxRange1BegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxRange1EndAuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.auth_comp_id.

getPdbxRange1EndAuthCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.auth_comp_id.

getPdbxRange1EndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_asym_id.

getPdbxRange1EndLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_comp_id.

getPdbxRange1EndPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxRange2BegLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_asym_id.

getPdbxRange2BegLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_comp_id.

getPdbxRange2BegPDBInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.pdbx_PDB_ins_code.

getPdbxRange2EndLabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_asym_id.

getPdbxRange2EndLabelCompId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Pointer to _atom_site.label_comp_id.

getPdbxRange2EndLabelInsCode() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

Place holder for PDB insertion code.

getPdbxRComplete() - Method in class org.rcsb.cif.schema.mm.Refine

The crystallographic reliability index Rcomplete for reflections that satisfy the resolution limits established by _refine.ls_d_res_high and _refine.ls_d_res_low and the observation limit established by _reflns.observed_criterion Ref: Luebben, J., Gruene, T., (2015).

getPdbxRComplete() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The crystallographic reliability index Rcomplete for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion Ref: Luebben, J., Gruene, T., (2015).

getPdbxRCullis() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_cullis records R_cullis for MAD phasing.

getPdbxRCullis() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record R_cullis for each derivative.

getPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_cullis_acentric records R_cullis using acentric data for MAD phasing.

getPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record R Cullis obtained from acentric data for each derivative, but broken into resolution shells

getPdbxRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record R_Cullis from from acentric reflection for each shell.

getPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_cullis_centric records R_cullis using centric data for MAD phasing.

getPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record R Cullis obtained from centric data for each derivative, but broken into resolution shells

getPdbxRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record R_Cullis from from centric reflection for each shell.

getPdbxRealSpaceR() - Method in class org.rcsb.cif.schema.mm.Refine

Real space R factor of electron density for all atoms.

getPdbxRecordRevised1() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The first PDB record name that was revised.

getPdbxRecordRevised2() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The second PDB record name that was revised.

getPdbxRecordRevised3() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The third PDB record name that was revised.

getPdbxRecordRevised4() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The fourth PDB record name that was revised.

getPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The overall redundancy for the data set.

getPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.Reflns

Overall redundancy for this data set (%).

getPdbxRedundancy() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

Redundancy for the current shell.

getPdbxRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.Reflns

The redundancy in set of observed reflections.

getPdbxRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

For this shell, the redundancy in the observed reflections.

getPdbxReferenceEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_LINK category give details about the linkages between entities within reference molecules.

getPdbxReferenceEntityList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_LIST category record the list of entities within each reference molecule.

getPdbxReferenceEntityNonpoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_NONPOLY category record the list of entities within each reference molecule.

getPdbxReferenceEntityPoly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_POLY category record details about the polymer, such as the type of the polymer, the number of monomers and whether it has nonstandard features.

getPdbxReferenceEntityPolyLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_POLY_LINK category give details about polymer linkages including both standard and non-standard linkages between polymer componnents.

getPdbxReferenceEntityPolySeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_POLY_SEQ category specify the sequence of monomers in a polymer.

getPdbxReferenceEntitySequence() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Additional features associated with the reference entity.

getPdbxReferenceEntitySrcNat() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_SRC_NAT category record details of the source from which the entity was obtained.

getPdbxReferenceEntitySubcomponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_ENTITY_SUBCOMPONENTS category records subcomponent sequence from which this entity could be built.

getPdbxReferenceLinkedEntity() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_reference_linked_entity category describe common observed interaction patterns within linked entities.

getPdbxReferenceLinkedEntityCompLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_reference_linked_entity_comp_link category enumerate inter-entity linkages between the components of common observed interaction patterns described in the pdbx_reference_linked_entity category.

getPdbxReferenceLinkedEntityCompList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_reference_linked_entity_comp_list category lists the constituents of common observed interaction patterns described in the pdbx_reference_linked_entity category.

getPdbxReferenceLinkedEntityLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the pdbx_reference_linked_entity_link category enumerate linkages between the entities in common observed interaction patterns described in the pdbx_reference_linked_entity category.

getPdbxReferenceMolecule() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE category record reference information about small polymer molecules.

getPdbxReferenceMoleculeAnnotation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_ANNOTATION category specify additional annotation relevant to the molecular entities.

getPdbxReferenceMoleculeDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_DETAILS category records textual details about small polymer molecules.

getPdbxReferenceMoleculeFamily() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_FAMILY category identify entity families.

getPdbxReferenceMoleculeFeatures() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Additional features associated with the reference entity.

getPdbxReferenceMoleculeList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_LIST category record reference information about small polymer molecules.

getPdbxReferenceMoleculeRelatedStructures() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_RELATED_STRUCTURES category record details of the structural examples in related databases for this entity.

getPdbxReferenceMoleculeSynonyms() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_MOLECULE_SYNONYMS category records synonym names for reference entities.

getPdbxReferencePublicationList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFERENCE_PUBLICATION_LIST hold reference information related to PDB citation data.

getPdbxRefId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A reference to _pdbx_reference_entity_list.ref_entity_id

getPdbxRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFINE category record details about additional structure refinement parameters which are needed to complete legacy REMARK 3 refinement templates in PDB format files.

getPdbxRefineAuxFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Auxilary parameter and topology files used in refinement.

getPdbxRefineCode() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

record the refinement code number (from CCP4.)

getPdbxRefineComponent() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFINE_COMPONENT category record statistics of the final model relative to the density map.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.PdbxXplorFile

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.Refine

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineBIso

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineHist

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

This data item uniquely identifies a refinement within an entry.

getPdbxRefineId() - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

This data item uniquely identifies a refinement within an entry.

getPdbxRefineLsRestrNcs() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Holds details of NCS restraints in cases where multiple conditions are provided for each domain.

getPdbxRefineTls() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_TLS category record details about TLS parameters used in structure refinement.

getPdbxRefineTlsGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REFINE_TLS_GROUP category record details about a fragment of a TLS group.

getPdbxReflns() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_reflns records the number of reflections used for MAD phasing.

getPdbxReflns() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record number of reflections used for each derivative.

getPdbxReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_reflns_acentric records the number of acentric reflections for MAD phasing.

getPdbxReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record number of acentric reflections used for phasing for each derivative, but broken into resolution shells

getPdbxReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_reflns_centric records the number of centric reflections for MAD phasing.

getPdbxReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record number of centric reflections used for phasing for each derivative, but broken into resolution shells

getPdbxReflnsTwin() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Details decribing crystallographic twinning.

getPdbxRejects() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The number of rejected reflections in the data set.

getPdbxRejects() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The number of rejected reflections in the resolution shell.

getPdbxRelatedCodesPDB() - Method in class org.rcsb.cif.schema.mm.Database

The codes of related PDB entries.

getPdbxRelatedExpDataSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_RELATED_DATA_SET category record references to experimental data sets related to the entry.

getPdbxReleaseStatus() - Method in class org.rcsb.cif.schema.mm.ChemComp

This data item holds the current release status for the component.

getPdbxRemediationAtomSiteMapping() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_REMEDIATION_ATOM_SITE_MAPPING category records mapping information between selected molecular entities that have been chemically redefined.

getPdbxReplacedBy() - Method in class org.rcsb.cif.schema.mm.ChemComp

Identifies the _chem_comp.id of the component that has replaced this component.

getPdbxReplaces() - Method in class org.rcsb.cif.schema.mm.ChemComp

Identifies the _chem_comp.id's of the components which have been replaced by this component.

getPdbxReRefinement() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Describes the origin of the experimental data used in this entry.

getPdbxReservedName() - Method in class org.rcsb.cif.schema.mm.ChemComp

Previous chemical name used for this component if a name correction has been made.

getPdbxResidueName() - Method in class org.rcsb.cif.schema.mm.RefineBIso

Residue name of those residues treated similarly for isotropic B (temperature) factor refinement.

getPdbxResidueNum() - Method in class org.rcsb.cif.schema.mm.RefineBIso

Resiude number of residues treated similarly for isotropic B (temperature) factor refinement.

getPdbxResidueNumbering() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

Preferred residue numbering in the BIRD definition.

getPdbxResNetIOverAvSigmaI2() - Method in class org.rcsb.cif.schema.mm.Reflns

Resolution (angstrom) for reflections with <I>/<sigma(I)> = 2.

getPdbxResNetIOverSigmaI2() - Method in class org.rcsb.cif.schema.mm.Reflns

Resolution (angstroms) for reflections with <I/sigma(I)> = 2.

getPdbxRestraintFunction() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

The functional form of the restraint function used in the least-squares refinement.

getPdbxRFreeFlag() - Method in class org.rcsb.cif.schema.mm.Refln

The R-free flag originally assigned to the reflection.

getPdbxRFreeSelectionDetails() - Method in class org.rcsb.cif.schema.mm.Refine

Details of the manner in which the cross validation reflections were selected.

getPdbxRKraut() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_kraut records R_kraut for MAD phasing.

getPdbxRKraut() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record R_kraut obtained from all data data for each derivative.

getPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_kraut_acentric records R_kraut using acentric data for MAD phasing.

getPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record R_kraut obtained from acentric data for each derivative.

getPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record R Kraut obtained from acentric data for each derivative, but broken into resolution shells

getPdbxRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record R_kraut from from acentric reflection for each shell.

getPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMAD

_phasing_MAD.pdbx_R_kraut_centric records R_kraut using centric data for MAD phasing.

getPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

record R_kraut obtained from centric data for each derivative.

getPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

record R Kraut obtained from centric data for each derivative, but broken into resolution shells

getPdbxRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

record R_Kraut from from centric reflection for each shell.

getPdbxRmchOutlier() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_RMCH_OUTLIER category list the residues with torsion angles outside the expected Ramachandran regions.

getPdbxRmergeIAll() - Method in class org.rcsb.cif.schema.mm.Reflns

The R value for merging all intensities in this data set.

getPdbxRmergeIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

This item is the same as _reflns_shell.pdbx_Rmerge_I_all, but applies to observed Friedel pairs only.

getPdbxRmergeIAnomalous() - Method in class org.rcsb.cif.schema.mm.Reflns

This item is the same as _reflns.pdbx_Rmerge_I, but applies only to observed Friedel pairs.

getPdbxRmergeIObs() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The R factor for merging the reflections that satisfy the resolution limits established by _diffrn_reflns.d_resolution_high and _diffrn_reflns.d_resolution_low and the observation limit established by _diffrn_reflns.observed_criterion.

getPdbxRmergeIObs() - Method in class org.rcsb.cif.schema.mm.Reflns

The R value for merging intensities satisfying the observed criteria in this data set.

getPdbxRms() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

Records the standard deviation in the restraint between NCS related domains.

getPdbxRmsDevsCovalent() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_RMS_DEVS_COVALENT record the summary RMS deviations for nucleic acid covalent geometry relative to small molecule crystal standards.

getPdbxRmsDevsCovByMonomer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_RMS_DEVS_COV_BY_MONOMER record the RMS deviations covalent geometry for each momoner relative to small molecule crystal standards.

getPdbxRobotSystem() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The details about each robotic system used to collect data for this project.

getPdbxRole() - Method in class org.rcsb.cif.schema.mm.StructConn

The chemical or structural role of the interaction

getPdbxRpimIAll() - Method in class org.rcsb.cif.schema.mm.Reflns

The precision-indicating merging R factor value Rpim, for merging all intensities in this data set.

getPdbxRpimIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The precision-indicating merging R factor value Rpim, for merging all intensities in a given shell.

getPdbxRpimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.Reflns

This item is the same as _reflns.pdbx_Rpim_I_all, but applies only to observed Friedel pairs.

getPdbxRpimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

This item serves the same purpose as _reflns_shell.pdbx_Rpim_I_all, but applies to observed Friedel pairs only.

getPdbxRrimIAll() - Method in class org.rcsb.cif.schema.mm.Reflns

The redundancy-independent merging R factor value Rrim, also denoted Rmeas, for merging all intensities in this data set.

getPdbxRrimIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The redundancy-independent merging R factor value Rrim, also denoted Rmeas, for merging all intensities in a given shell.

getPdbxRrimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.Reflns

This item is the same as _reflns.pdbx_Rrim_I_all, but applies to the observed Friedel pairs only.

getPdbxRrimIAllAnomalous() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

This item is the duplicate of _reflns_shell.pdbx_Rrim_I_all, but is limited to observed Friedel pairs.

getPdbxRSplit() - Method in class org.rcsb.cif.schema.mm.Reflns

R split measures the agreement between the sets of intensities created by merging odd- and even-numbered images from the overall data.

getPdbxRSplit() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

R split measures the agreement between the sets of intensities created by merging odd- and even-numbered images from the data within the resolution shell.

getPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The R factor for averaging the symmetry related reflections to a unique data set.

getPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.Reflns

The R sym value as a decimal number.

getPdbxRsymValue() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

R sym value in percent.

getPdbxSalt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The identification of the crystallization salt.

getPdbxScalingRejects() - Method in class org.rcsb.cif.schema.mm.Reflns

Number of reflections rejected in scaling operations.

getPdbxScatCromerMannA5() - Method in class org.rcsb.cif.schema.mm.AtomType

Scattering-factor coefficient a5, used to calculate electron elastic atomic scattering factors for the defined atom type.

getPdbxScatCromerMannA6() - Method in class org.rcsb.cif.schema.mm.AtomType

Scattering-factor coefficient a6, used to calculate electron elastic atomic scattering factors for the defined atom type.

getPdbxScatCromerMannB5() - Method in class org.rcsb.cif.schema.mm.AtomType

Scattering-factor coefficient b5, used to calculate electron elastic atomic scattering factors for the defined atom type.

getPdbxScatCromerMannB6() - Method in class org.rcsb.cif.schema.mm.AtomType

Scattering-factor coefficient b6, used to calculate electron elastic atomic scattering factors for the defined atom type.

getPdbxScatteringType() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The radiation scattering type for this diffraction data set.

getPdbxScatZ() - Method in class org.rcsb.cif.schema.mm.AtomType

Atomic number of atom in scattering amplitude.

getPdbxSecretion() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Identifies the secretion from which the molecule was isolated.

getPdbxSeqAlignBegin() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The sequence position in the database sequence at which the alignment with your sequence begins.

getPdbxSeqAlignBegInsCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Initial insertion code of the PDB sequence segment.

getPdbxSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The sequence position in the database sequence at which the alignment with your sequence ends.

getPdbxSeqAlignEndInsCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

Ending insertion code of the sequence segment

getPdbxSeqDbAccessionCode() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

Sequence database accession number.

getPdbxSeqDbId() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The identifier for this sequence in the sequence data base.

getPdbxSeqDbName() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The name of the sequence data base containing a database entry for this sequence.

getPdbxSeqDbName() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

Sequence database name.

getPdbxSeqDbSeqNum() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

Sequence database sequence number.

getPdbxSeqMapDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SEQ_MAP_DEPOSITOR_INFO record the details about the mapping sample and coordinate sequences.

getPdbxSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.EntityPoly

Chemical sequence expressed as string of one-letter amino acid codes.

getPdbxSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.StructRef

Database chemical sequence expressed as string of one-letter amino acid codes.

getPdbxSeqOneLetterCodeCan() - Method in class org.rcsb.cif.schema.mm.EntityPoly

Cannonical chemical sequence expressed as string of one-letter amino acid codes.

getPdbxSeqOneLetterCodeSample() - Method in class org.rcsb.cif.schema.mm.EntityPoly

For cases in which the sample and model sequence differ this item contains the sample chemical sequence expressed as string of one-letter amino acid codes.

getPdbxSeqThreeLetterCode() - Method in class org.rcsb.cif.schema.mm.EntityPoly

Chemical sequence expressed as string of three-letter amino acid codes.

getPdbxSeqType() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

This data item povides additional information about the sequence type.

getPdbxSequenceAnnotation() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

PDBX_SEQUENCE_ANNOTATION holds internal details about molecular sequences described in the context of PDB chains.

getPdbxSequenceEvidenceCode() - Method in class org.rcsb.cif.schema.mm.EntityPoly

Evidence for the assignment of the polymer sequence.

getPdbxSequencePattern() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SEQUENCE_PATTERN category record the number of occurences of common step sequence patterns (e.g.

getPdbxSequenceRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SEQUENCE_RANGE category identify the beginning and ending points of polypeptide sequence segments.

getPdbxSerialCrystalExperiment() - Method in class org.rcsb.cif.schema.mm.Diffrn

Y/N if using serial crystallography experiment in which multiple crystals contribute to each diffraction frame in the experiment.

getPdbxSerialCrystallographyDataReduction() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_DATA_REDUCTION category record details about data processing that are unique to XFEL experiments.

getPdbxSerialCrystallographyMeasurement() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_MEASUREMENT category record details the beam that is impinging on the sample

getPdbxSerialCrystallographySampleDelivery() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY category record general details about the sample delivery

getPdbxSerialCrystallographySampleDeliveryFixedTarget() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY_FIXED_TARGET category record details about sample delivery using a fixed taget.

getPdbxSerialCrystallographySampleDeliveryInjection() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY_INJECTION category record details about sample delivery by injection

getPdbxSGProject() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_CONTACT_AUTHOR category record details about the Structural Genomics Project and name and initials for each Center.

getPdbxSinPhaseCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The sine of the calculated phase.

getPdbxSmiles() - Method in class org.rcsb.cif.schema.mm.ChemComp

SMILES code for component.

getPdbxSoakSalt() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The identification of the crystallization soaking salt.

getPdbxSoakSolv() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The identification of the crystallization soaking solvent

getPdbxSolnScatter() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SOLN_SCATTER category record details about a solution scattering experiment

getPdbxSolnScatterModel() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SOLN_SCATTER_MODEL category record details about the homology model fitting to the solution scatter data.

getPdbxSolv() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The identification of the crystallization solvent.

getPdbxSolventAtomSiteMapping() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SOLVENT_ATOM_SITE_MAPPING category records mapping information between solvent atoms before and after symmetry repositioning.

getPdbxSolventInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SOLVENT_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

getPdbxSolventIonProbeRadii() - Method in class org.rcsb.cif.schema.mm.Refine

For bulk solvent mask calculation, the amount that the ionic radii of atoms, which can be ions, are increased used.

getPdbxSolventShrinkageRadii() - Method in class org.rcsb.cif.schema.mm.Refine

For bulk solvent mask calculation, amount mask is shrunk after taking away atoms with new radii and a constant value assigned to this new region.

getPdbxSolventVdwProbeRadii() - Method in class org.rcsb.cif.schema.mm.Refine

For bulk solvent mask calculation, the value by which the vdw radii of non-ion atoms (like carbon) are increased and used.

getPdbxSource() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data item will still be used until the ENTITY category is fully adopted by NDBQuery.

getPdbxSourceSpecificBeamline() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Beamline for synchrotron source.

getPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

This data item is an ordinal identifier for entity_src_gen data records.

getPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

This data item is an ordinal identifier for entity_src_nat data records.

getPdbxSrcId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

This data item is an ordinal identifier for pdbx_entity_src_syn data records.

getPdbxStartingModel() - Method in class org.rcsb.cif.schema.mm.Refine

Starting model for refinement.

getPdbxStatus() - Method in class org.rcsb.cif.schema.mm.ChemComp

Release status of component

getPdbxStereochemistry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STEREOCHEMISTRY identify chiral centers and associated chiral volumes.

getPdbxStereochemistryTargetValues() - Method in class org.rcsb.cif.schema.mm.Refine

Stereochemistry target values used in refinement.

getPdbxStereochemTargetValSpecCase() - Method in class org.rcsb.cif.schema.mm.Refine

Special case of stereochemistry target values used in SHELXL refinement.

getPdbxStereoConfig() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The chiral configuration of the atom that is a chiral center.

getPdbxStereoConfig() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

Stereochemical configuration across a double bond.

getPdbxStndAtomId() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

A standard identifier for the atom.

getPdbxStrand() - Method in class org.rcsb.cif.schema.mm.RefineBIso

Asym chain id of residues treated similarly for isotropic B (temperature) factor refinement.

getPdbxStrandId() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The PDB strand/chain id(s) corresponding to this polymer entity.

getPdbxStrandId() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The PDB strand/chain ID .

getPdbxStructAssembly() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASSEMBLY category record details about the structural elements that form macromolecular assemblies.

getPdbxStructAssemblyAuthClassification() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Provides reason a particular assembly in pdbx_struct_assembly is of interest.

getPdbxStructAssemblyAuthEvidence() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Provides author supplied evidentiary support for assemblies in pdbx_struct_assembly.

getPdbxStructAssemblyAuthEvidenceDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Provides author supplied evidentiary support for assemblies in pdbx_struct_assembly.

getPdbxStructAssemblyDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASSEMBLY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY.

getPdbxStructAssemblyGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASSEMBLY_GEN category record details about the generation of each macromolecular assemblies.

getPdbxStructAssemblyGenDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASSEMBLY_GEN_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY_GEN.

getPdbxStructAssemblyProp() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Properties and features of structural assemblies.

getPdbxStructAssemblyPropDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASSEMBLY_PROP_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY_PROP.

getPdbxStructAsymGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ASYM_GEN category record details about the generation of the crystallographic asymmetric unit.

getPdbxStructBiolFunc() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_BIOL_FUNC category record details about the function of a particular biological assembly.

getPdbxStructChemCompDiagnostics() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_CHEM_COMP_DIAGNOSTICS category provides structural diagnostics in chemical components instances.

getPdbxStructChemCompFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_CHEM_COMP_FEATURE category provides structural annotations in chemical components instances.

getPdbxStructConnAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_CONN_ANGLE category record the angles in connections between portions of the structure.

getPdbxStructEntityInst() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_ENTITY_INST category record details about the structural elements in the deposited entry.

getPdbxStructGroupComponentRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_GROUP_COMPONENT_RANGE category define a structural group as a continuous span chemical components.

getPdbxStructGroupComponents() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_GROUP_COMPONENTS category list component-level group assignments within the entry.

getPdbxStructGroupId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The value of _atom_site.pdbx_struct_group_id identifies the group or groups assigned to this atom.

getPdbxStructGroupList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_GROUP_LIST define groups of related components or atoms.

getPdbxStructInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Special features of this structural entry.

getPdbxStructLegacyOperList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_LEGACY_OPER_LIST category describe Cartesian rotation and translation operations required to generate or transform the coordinates deposited with this entry.

getPdbxStructLink() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_LINK category record details about covalent linkages in the structure.

getPdbxStructModResidue() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_MOD_RESIDUE category list the modified polymer components in the entry and provide some details describing the nature of the modification.

getPdbxStructMsymGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_MSYM_GEN category record details about the generation of the minimal asymmetric unit.

getPdbxStructNcsVirusGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_NCS_VIRUS_GEN category record details about the generation of virus structures from NCS matrix operators.

getPdbxStructOperList() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_OPER_LIST category describe Cartesian rotation and translation operations required to generate or transform the coordinates deposited with this entry.

getPdbxStructOperListDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_OPER_LIST_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_OPER_LIST.

getPdbxStructPackGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_PACK_GEN category record details about the generation of the packing picture(s).

getPdbxStructRefSeqDeletion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_INSERTION category annotate deletions in the sequence of the entity described in the referenced database entry.

getPdbxStructRefSeqDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory STRUCT_REF_SEQ.

getPdbxStructRefSeqDifDepositorInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_DIF_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory STRUCT_REF_SEQ_DIF.

getPdbxStructRefSeqFeature() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_FEATURE category provide a mechanism for identifying and annotating sequence features.

getPdbxStructRefSeqFeatureProp() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_FEATURE_PROP category provide a mechanism for identifying and annotating properties of sequence features.

getPdbxStructRefSeqInsertion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_REF_SEQ_INSERTION category annotate insertions in the sequence of the entity described in the referenced database entry.

getPdbxStructSheetHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_SHEET_HBOND category record details about the hydrogen bonding between residue ranges in a beta sheet.

getPdbxStructSpecialSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_STRUCT_SPECIAL_SYMMETRY category list the molecular components that lie on special symmetry positions.

getPdbxStructureRefinementMethod() - Method in class org.rcsb.cif.schema.mm.Computing

Program/package name for structure refinement method.

getPdbxSubcomponentList() - Method in class org.rcsb.cif.schema.mm.ChemComp

The list of subcomponents contained in this component.

getPdbxSugarPhosphateGeometry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SUGAR_PHOSPHATE_GEOMETRY record the RMS deviations covalent geometry for each momoner relative to small molecule crystal standards.

getPdbxSummaryFlags() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Container category for a list of feature flags associated with each structure entry.

getPdbxSupportingExpDataSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_SUPPORTING_EXP_DATA_SET category record to experimental data set dependencies for this entry.

getPdbxSynchrotronBeamline() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Synchrotron beamline.

getPdbxSynchrotronSite() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Synchrotron site.

getPdbxSynchrotronYN() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Yes/No if synchrotron source was used or not.

getPdbxSynonyms() - Method in class org.rcsb.cif.schema.mm.ChemComp

Synonym list for the component.

getPdbxTableinfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

getPdbxTargetId() - Method in class org.rcsb.cif.schema.mm.Entity

The value of _entity.target_id points to a TARGETDB target idenitifier from which this entity was generated.

getPdbxTargetIdentifier() - Method in class org.rcsb.cif.schema.mm.EntityPoly

For Structural Genomics entries, the sequence's target identifier registered at the TargetTrack database.

getPdbxTempDetails() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The value of _phasing_set.pdbx_temp_details describes any special details about the data collection temperature for this phasing data set.

getPdbxTitleText() - Method in class org.rcsb.cif.schema.mm.Struct

A title for the experiment or analysis that is represented in the entry.

getPdbxTlsGroupId() - Method in class org.rcsb.cif.schema.mm.AtomSite

The TLS group to which the atom position is assigned.

getPdbxTLSResidualADPFlag() - Method in class org.rcsb.cif.schema.mm.Refine

A flag for TLS refinements identifying the type of atomic displacement parameters stored in _atom_site.B_iso_or_equiv.

getPdbxTotalNumberOfBinsUsed() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Total number of bins used.

getPdbxTrnaInfo() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_TRNA_INFO category are still used until the 'entity' categories are entered into the database, even though the T-RNA is repeated.

getPdbxType() - Method in class org.rcsb.cif.schema.mm.ChemComp

A preliminary classification used by PDB.

getPdbxType() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

The type of NCS restraint.

getPdbxType() - Method in class org.rcsb.cif.schema.mm.StructAsym

This data item describes the general type of the structural elements in the ATOM_SITE category.

getPdbxTypeModified() - Method in class org.rcsb.cif.schema.mm.ChemComp

Modification flag.

getPdbxUniqueAxis() - Method in class org.rcsb.cif.schema.mm.Cell

To further identify unique axis if necessary.

getPdbxUnobsOrZeroOccAtoms() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS category list the atoms within the entry that are either unobserved or have zero occupancy/

getPdbxUnobsOrZeroOccResidues() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_UNOBS_OR_ZERO_OCC_RESIDUES category list the residues within the entry that are not observed or have zero occupancy.

getPdbxUnpair() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

These records give information about residues which do not pair (h-bond) in the asymmetric unit.

getPdbxValAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_VAL_ANGLE category lists the covalent bond angles in this entry deviating by greater than 6*sigma from standard values.

getPdbxValBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_VAL_BOND category lists the covalent bond angles in this entry deviating by greater than 6*sigma from standard values.

getPdbxValChiral() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VAL_CHIRAL category list the atoms with nonstandard chiralities.

getPdbxValContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_VAL_CONTACT category lists non-bonded atoms within the assymetric unit of the entry that are in close contact.

getPdbxValidateChiral() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_CHIRAL category list the residues that contain unexpected configuration of chiral centers.

getPdbxValidateCloseContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_CLOSE_CONTACT category list the atoms within the entry that are in close contact with regard the distances expected from either covalent bonding or closest approach by van der Waals contacts.

getPdbxValidateMainChainPlane() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_MAIN_CHAIN_PLANE category list the residues that contain unexpected deviations from planes for main chain atoms as defined by the improper torsion angle describing planarity: PLANARITY = C(i-1) - CA(i-1) - N(i) - O(i-1) ==> planar < 5 as a pseudo torsion

getPdbxValidatePeptideOmega() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_PEPTIDE_OMEGA category list the residues that contain peptide bonds deviate significantly from both cis and trans conformation.

getPdbxValidatePlanes() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_PLANES category list the residues that contain unexpected deviations from planes centers.

getPdbxValidatePlanesAtom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_PLANES_ATOM category list the residues that contain unexpected deviations from planes centers.

getPdbxValidatePolymerLinkage() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_POLYMER_LINKAGE category list the polymer linkages within the entry that are outside of typlical covalent distances.

getPdbxValidateRmsdAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_RMSD_ANGLE category list the the covalent bond angles found in an entry that have values which deviate from expected values by more than 6*rmsd for the particular entry from the expected standard value

getPdbxValidateRmsdBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_RMSD_BOND category list the covalent bonds that have values which deviate from expected values by more than 6*rmsd.

getPdbxValidateSymmContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_SYMM_CONTACT category list the atoms within the entry that are in close contact with regard the distances expected from either covalent bonding or closest approach by van der Waals contacts.

getPdbxValidateTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VALIDATE_TORSION category list the residues with torsion angles outside the expected ramachandran regions

getPdbxValSymContact() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

The PDBX_VAL_SYM_CONTACT category lists symmetry related contacts amoung non-bonded atoms.

getPdbxValueOrder() - Method in class org.rcsb.cif.schema.mm.StructConn

The chemical bond order associated with the specified atoms in this contact.

getPdbxVariant() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

Identifies the variant.

getPdbxVector1() - Method in class org.rcsb.cif.schema.mm.StructBiolView

translation vector

getPdbxVector2() - Method in class org.rcsb.cif.schema.mm.StructBiolView

translation vector

getPdbxVector3() - Method in class org.rcsb.cif.schema.mm.StructBiolView

translation vector

getPdbxVersion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VERSION category record details about the version of this entry.

getPdbxViewCategory() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIEW_CATEGORY specify the categories belonging to a category view group.

getPdbxViewCategoryGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIEW_CATEGORY_GROUP identify collections of related mmCIF categories.

getPdbxViewItem() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIEW_ITEM specify the mmCIF data items belonging to a view category.

getPdbxVirtualAngle() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIRTUAL_ANGLE category record details about the molecular virtual angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

getPdbxVirtualBond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIRTUAL_BOND category record details about virtual bonds, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

getPdbxVirtualTorsion() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PDBX_VIRTUAL_TORSION category record details about virtual torsion angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

getPdbxWavelength() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Wavelength of radiation.

getPdbxWavelength() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Wavelength of radiation.

getPdbxWavelengthList() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Comma separated list of wavelengths or wavelength range.

getPdbxWavelengthList() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

Comma separated list of wavelengths or wavelength range.

getPdbxWeight() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

Records the weight used for NCS restraint.

getPdbxX_rayImage() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

A code to indicate that an x-ray image is available for this crystal.

getPdbxX_rayImageType() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

A description of the type of x-ray image for this crystal.

getPdbxXplorFile() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Parameter and topology files used in X-PLOR/CNS refinement.

getPDF() - Method in class org.rcsb.cif.schema.core.Database

Code assigned in the Powder Diffraction File.

getPDF() - Method in class org.rcsb.cif.schema.core.DatabaseCode

Code assigned in the Powder Diffraction File.

getPeptidePlanarityRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The peptide planarity rmsd.

getPeptidePlanarityRmsDevError() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The error in the peptide planarity rmsd.

getPercentMarkedReject() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

Percent of reflections marked for rejection in data processing.

getPercentPossibleAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Percentage of reflections present in this shell over that possible.

getPercentPossibleAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The percentage of geometrically possible reflections represented by all reflections measured for this shell.

getPercentPossibleGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Percentage of reflections present in this shell which are significantly intense (see _reflns.threshold_expression), over that possible.

getPercentPossibleGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The percentage of geometrically possible reflections represented by significantly intense reflections (see _reflns.threshold_expression) measured for this shell.

getPercentPossibleObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Percentage of reflections present in this shell which are significantly intense (see _reflns.threshold_expression), over that possible.

getPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The percentage of geometrically possible reflections represented by reflections that satisfy the resolution limits established by _diffrn_reflns_shell.d_resolution_high and _diffrn_reflns_shell.d_resolution_low and the observation limit established by _diffrn_reflns.observed_criterion.

getPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.Reflns

The percentage of geometrically possible reflections represented by reflections that satisfy the resolution limits established by _reflns.d_resolution_high and _reflns.d_resolution_low and the observation limit established by _reflns.observed_criterion.

getPercentPossibleObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The percentage of geometrically possible reflections represented by reflections classified as 'observed' (see _reflns.observed_criterion) for this shell.

getPercentReflnsObs() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation criterion established by _reflns.observed_criterion, expressed as a percentage of the number of geometrically observable reflections that satisfy the resolution limits.

getPercentReflnsRFree() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The number of reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getPercentRejected() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

Percent of reflections rejected in data processing.

getPerpDist() - Method in class org.rcsb.cif.schema.core.ExptlCrystalFace

Perpendicular distance of face to the centre of rotation of the crystal.

getPerpDist() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalFace

The perpendicular distance in millimetres from the face to the centre of rotation of the crystal.

getPh() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

The pH value of the observed sample buffer.

getPH() - Method in class org.rcsb.cif.schema.mm.EmBuffer

The pH of the sample buffer.

getPH() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The pH at which the crystal was grown.

getPH() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

The pH of the solution.

getPH() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The pH at which the NMR data were collected.

getPhase() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The mean of the phase values for reflections for this derivative in this shell.

getPhaseCalc() - Method in class org.rcsb.cif.schema.core.Refln

The phase of the calculated structure-factor.

getPhaseCalc() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

The calculated value of the structure-factor phase based on the heavy-atom model for this derivative in degrees.

getPhaseCalc() - Method in class org.rcsb.cif.schema.mm.Refln

The calculated structure-factor phase in degrees.

getPhaseCalculationDetails() - Method in class org.rcsb.cif.schema.mm.Reflns

The value of _reflns.phase_calculation_details describes a special details about calculation of phases in _refln.phase_calc.

getPhaseErrorRejectionCriteria() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Criteria used to reject phases

getPhaseMeas() - Method in class org.rcsb.cif.schema.core.Refln

The phase of the measured structure-factor.

getPhaseMeas() - Method in class org.rcsb.cif.schema.mm.Refln

The measured structure-factor phase in degrees.

getPhasePlate() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

Phase plate information

getPhaseResidual() - Method in class org.rcsb.cif.schema.mm.EmDiffractionShell

Phase residual for this resolution shell, in degrees

getPhaseReversal() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Yes if Phase reversal (flipping) was performed

getPhaseReversalAnisotropic() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Yes if Anisotropic phase reversal (flipping) was performed

getPhaseReversalCorrectionSpace() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

CTF phase reversal correction space

getPhasing() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING category record details about the phasing of the structure, listing the various methods used in the phasing process.

getPhasingAveraging() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_AVERAGING category record details about the phasing of the structure where methods involving averaging of multiple observations of the molecule in the asymmetric unit are involved.

getPhasingIsomorphous() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_ISOMORPHOUS category record details about the phasing of the structure where a model isomorphous to the structure being phased was used to generate the initial phases.

getPhasingMAD() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MAD category record details about the phasing of the structure where methods involving multiple-wavelength anomalous-dispersion techniques are involved.

getPhasingMADClust() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MAD_CLUST category record details about a cluster of experiments that contributed to the generation of a set of phases.

getPhasingMADExpt() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MAD_EXPT category record details about a MAD phasing experiment, such as the number of experiments that were clustered together to produce a set of phases or the statistics for those phases.

getPhasingMADRatio() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MAD_RATIO category record the ratios of phasing statistics between pairs of data sets in a MAD phasing experiment, in given shells of resolution.

getPhasingMADSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MAD_SET category record details about the individual data sets used in a MAD phasing experiment.

getPhasingMIR() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR category record details about the phasing of the structure where methods involving isomorphous replacement are involved.

getPhasingMIRDer() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR_DER category record details about individual derivatives used in the phasing of the structure when methods involving isomorphous replacement are involved.

getPhasingMIRDerRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR_DER_REFLN category record details about the calculated structure factors obtained in an MIR phasing experiment.

getPhasingMIRDerShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR_DER_SHELL category record statistics, broken down into shells of resolution, for an MIR phasing experiment.

getPhasingMIRDerSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR_DER_SITE category record details about the heavy-atom sites in an MIR phasing experiment.

getPhasingMIRShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_MIR_SHELL category record statistics for an isomorphous replacement phasing experiment.broken down into shells of resolution.

getPhasingSet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_SET category record details about the data sets used in a phasing experiment.

getPhasingSetRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PHASING_SET_REFLN category record the values of the measured structure factors used in a phasing experiment.

getPHErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Estimate of the standard error for the value for the sample pH.

getPhi() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

The phi value that for the residue that lies outside normal regions of the Rammachandran plot

getPhi() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

The Phi value that for the residue that lies outside normal limits (in combination with the Psi value) with regards to the rammachandran plot

getPhi() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the main-chain torsion angle phi.

getPhone() - Method in class org.rcsb.cif.schema.core.AuditContactAuthor

Telephone number of author submitting the manuscript and data block.

getPhone() - Method in class org.rcsb.cif.schema.core.Journal

The phone number of the coeditor.

getPhone() - Method in class org.rcsb.cif.schema.core.JournalCoeditor

The phone number of the coeditor.

getPhone() - Method in class org.rcsb.cif.schema.core.JournalTecheditor

Phone number of the technical editor for this publication.

getPhone() - Method in class org.rcsb.cif.schema.core.Publ

Telephone number of author submitting the manuscript and data block.

getPhone() - Method in class org.rcsb.cif.schema.core.PublAuthor

Telephone number of the author submitting the manuscript and data block.

getPhone() - Method in class org.rcsb.cif.schema.core.PublContactAuthor

Telephone number of author submitting the manuscript and data block.

getPhone() - Method in class org.rcsb.cif.schema.mm.AuditContactAuthor

The telephone number of the author of the data block to whom correspondence should be addressed.

getPhone() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The telephone number of the author of the data block to whom correspondence should be addressed.

getPhosphorusShiftsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A value indicating if 31P chemical shifts are being deposited and if IUPAC chemical shift referencing was used.

getPhotonsPerPulse() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The photons per pulse measured in (tera photons (10^(12)^)/pulse units).

getPHUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Units for the value of the sample condition pH.

getPixelSizeHeight() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Pixel size height of the 2dem class average image.

getPixelSizeWidth() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Pixel size width of the 2dem class average image.

getPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.EmMap

The length in Angstroms of one voxel along the X axis.

getPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

The length in Angstroms of one voxel along the X axis.

getPixelSpacingX() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

The length in Angstroms of one voxel along the X axis.

getPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.EmMap

The length in Angstroms of one voxel along the Y axis.

getPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

The length in Angstroms of one voxel along the Y axis.

getPixelSpacingY() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

The length in Angstroms of one voxel along the Y axis.

getPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.EmMap

The length in Angstroms of one voxel along the Z axis.

getPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

The length in Angstroms of one voxel along the Z axis.

getPixelSpacingZ() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

The length in Angstroms of one voxel along the Z axis.

getPlanarityOverallMax() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The maximum root mean square deviation for planarity (all atoms).

getPlanarityOverallRms() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

The overall root mean square deviation for planarity (all atoms).

getPlaneId() - Method in class org.rcsb.cif.schema.mm.ChemCompPlaneAtom

This data item is a pointer to _chem_comp_plane.id in the CHEM_COMP_PLANE category.

getPlaneId() - Method in class org.rcsb.cif.schema.mm.ChemLinkPlaneAtom

This data item is a pointer to _chem_link_plane.id in the CHEM_LINK_PLANE category.

getPlaneId() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

A pointer to _pdbx_validate_planes.id This is an integer serial number.

getPlaneType() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectPlane

The type of plane.

getPlasmid() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

The plasmid used to produce the component in the expression system.

getPlasmidDetails() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A description of special aspects of the plasmid that produced the entity in the host organism.

getPlasmidId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

This item is a pointer to _pdbx_construct.id in the PDBX_CONSTRUCT category.

getPlasmidName() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

The name of the plasmid that produced the entity in the host organism.

getPlasmidName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

The name of the plasmid that produced the entity in the host organism.

getPO1p() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The p_o1p covalent element of this monomer.

getPO2p() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The p_o2p covalent element of this monomer.

getPO5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The p_o5 covalent element of this monomer.

getPO5C5() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The p_o5_c5 covalent element of this monomer.

getPO5C5C4() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The p_o5_c5_c4 covalent element of this monomer.

getPointGroup() - Method in class org.rcsb.cif.schema.mm.StructNcsEns

The point group of the ensemble of structural elements related by one or more noncrystallographic symmetry operations.

getPointGroupH_M() - Method in class org.rcsb.cif.schema.core.SpaceGroup

The Hermann-Mauguin symbol denoting the geometric crystal class of space groups to which the space group belongs, and the geometric crystal class of point groups to which the point group of the space group belongs.

getPointMeasuredFractionFull() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Fraction of crystal point-group unique reflections (i.e.

getPointMeasuredFractionMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Fraction of crystal point-group unique reflections (i.e.

getPointSymmetry() - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

Point symmetry symbol, either Cn, Dn, T, O, or I

getPolarisnNorm() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

The angle, as viewed from the specimen, between the perpendicular component of the polarisation and the diffraction plane.

getPolarisnNorm() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The angle in degrees, as viewed from the specimen, between the perpendicular component of the polarization and the diffraction plane.

getPolarisnRatio() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Polarisation ratio of the diffraction beam incident on the crystal.

getPolarisnRatio() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

Polarization ratio of the diffraction beam incident on the crystal.

getPolarization() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The polarization measured in data collection.

getPolymerFlag() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

The value of polymer flag indicates whether the unobserved or zero occupancy atom is part of a polymer chain

getPolymerFlag() - Method in class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

The value of polymer flag indicates whether the unobserved or zero occupancy residue is part of a polymer chain or not

getPopulationFraction() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

A fraction representing the population of the particular state.

getPopulationFractionSd() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

The standard deviation of the population fraction.

getPosAsXyz() - Method in class org.rcsb.cif.schema.core.SymmetryEquiv

A parsable string giving one of the symmetry operations of the space group in algebraic form.

getPosAsXyz() - Method in class org.rcsb.cif.schema.mm.SymmetryEquiv

Symmetry-equivalent position in the 'xyz' representation.

getPositionId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

An identifier for the position in the polymeric entity where the probe is attached.

getPosSiteId() - Method in class org.rcsb.cif.schema.core.SymmetryEquiv

Index identifying each entry in the _space_group_symop.operation_xyz list.

getPostalCode() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, zip code.

getPostProcessId() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

An identifier for the post modeling analyses carried out.

getPostRelRecvdCoord() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

For author initiated replacement, indicates if new coordinates have been provided

getPostRelRecvdCoordDate() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

For author initiated replacement, date new coordinates have been provided

getPostRelReplacementReason() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

Records reason for author initiated coordinate replacement

getPostRelReplacementReasonDetails() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

Records additional details for author initiated coordinate replacement

getPostRelStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

For author initiated replacement, the current status of the replacement entry

getPostTreatment() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

Details of any post-chromatographic treatment of the protein sample.

getPower() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Generator power at which the radiation source device was operated.

getPower() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The power in kilowatts at which the radiation source was operated.

getPower() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.power records phasing power for MAD phasing.

getPower() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.power records phasing power for MAD phasing.

getPower() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.loc records phasing power for MAD phasing.

getPower() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The mean phasing power P for reflections for this derivative in this shell.

getPower() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The mean phasing power P for reflections in this shell.

getPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.power_acentric records phasing powe using acentric data for MAD phasing.

getPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.power_acentric records phasing power using acentric data for MAD phasing.

getPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.power_acentric records phasing powe using acentric data for MAD phasing.

getPowerAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The mean phasing power P for acentric reflections for this derivative.

getPowerBy() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

Sample deliver driving force, e.g.

getPowerCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.power_centric records phasing powe using centric data for MAD phasing.

getPowerCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.power_centric records phasing power using centric data for MAD phasing.

getPowerCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.power_centric records phasing powe using centric data for MAD phasing.

getPowerCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The mean phasing power P for centric reflections for this derivative.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

The identifier used by the PDB corresponding to the chemical definition for the molecule.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxMolecule

The value of _pdbx_molecule.prd_id is the PDB accession code for this reference molecule.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

The value of _pdbx_molecule_features.prd_id is the PDB accession code for this reference molecule.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

This data item is a pointer to _pdbx_reference_molecule.prd_id in the pdbx_reference_molecule category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The value of _pdbx_reference_entity_link.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

The value of _pdbx_reference_entity_list.prd_id is a reference _pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

The value of _pdbx_reference_entity_nonpoly.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

The value of _pdbx_reference_entity_poly.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The value of _pdbx_reference_entity_poly_link.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_POLY category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

The value of _pdbx_reference_entity_poly_seq.prd_id is a reference _pdbx_reference_entity_poly.prd_id in the PDBX_REFERENCE_ENTITY_POLY category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

The value of _pdbx_reference_entity_sequence.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The value of _pdbx_reference_entity_src_nat.prd_id is a reference _pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySubcomponents

The value of _pdbx_reference_entity_subcomponents.prd_id is a reference _pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

The value of _pdbx_reference_molecule.prd_id is the unique identifier for the reference molecule in this family.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

This data item is a pointer to _pdbx_reference_molecule.prd_id in the PDB_REFERENCE_MOLECULE category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

The value of _pdbx_reference_molecule_details.prd_id is a reference to _pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The value of _pdbx_reference_molecule_features.prd_id is a reference _pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeList

The value of _pdbx_reference_molecule_list.prd_id is the unique identifier for the reference molecule in this family.

getPrdId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

The value of _pdbx_reference_molecule_synonyms.prd_id is a reference _pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.

getPreAuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreAuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPreCartnX() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The prior x atom-site coordinate of the solvent position in angstroms.

getPreCartnY() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The prior y atom-site coordinate of the solvent position in angstroms.

getPreCartnZ() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The prior z atom-site coordinate of the solvent position in angstroms.

getPrecision() - Method in class org.rcsb.cif.EncodingStrategyHint

Report the precision to honor.

getPredictedSasa() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The predicted solvent accessible surface area.

getPredictionTarget() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that this entry is a candidate prediction target.

getPreGroupPDB() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPreOccupancy() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

The fraction of the atom type present for the prior atom site.

getPreparation() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Details of crystal growth and preparation of the crystals (e.g.

getPreparation() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

Details of crystal growth and preparation of the crystal (e.g.

getPreparation() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

Details of crystal growth and preparation of the crystals

getPrePDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

A component of the prior atom_site identifier.

getPrePDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

A component of the prior atom_site identifier.

getPrePdbxAlign() - Method in class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

An optional alignment flag.

getPressure() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The pressure at which the unit-cell parameters were measured (not the pressure used to synthesize the sample).

getPressure() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The pressure in kilopascals at which the unit-cell parameters were measured (not the pressure at which the sample was synthesized).

getPressure() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

Pressure of the glow discharge chamber, in pascals

getPressure() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The ambient pressure in kilopascals at which the crystal was grown.

getPressure() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The pressure at which NMR data were collected.

getPressureErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Estimate of the standard error for the value for the sample pressure.

getPressureEsd() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The standard uncertainty of the pressure at which the unit-cell parameters were measured.

getPressureEsd() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The standard uncertainty (estimated standard deviation) of _cell_measurement.pressure.

getPressureEsd() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The standard uncertainty (estimated standard deviation) of _exptl_crystal_grow.pressure.

getPressureHistory() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Details concerning the pressure history of the crystals.

getPressureSu() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The standard uncertainty of the pressure at which the unit-cell parameters were measured.

getPressureUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The units of pressure at which NMR data were collected.

getPretreatment() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

A description of the grid plus support film pretreatment.

getPrimaryCitationStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate status about primary citation data.

getPrintersFinal() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication last sent to the printers.

getPrintersFinal() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication last sent to the printers.

getPrintersFirst() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication first sent to the printers.

getPrintersFirst() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication first sent to the printers.

getProbability() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The real number that indicates the probability that the angle restraint is correct.

getProbability() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The real number that indicates the probability that the dihedral restraint is correct.

getProbability() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The real number that indicates the probability that the distance restraint is correct.

getProbability() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The real number that indicates the probability that the predicted distance restraint is correct.

getProbe() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Enumerated code for the nature of radiation used (i.e.

getProbe() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The nature of the radiation used (i.e.

getProbeChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

The identifier for the chemical descriptor of the probe.

getProbeId() - Method in class org.rcsb.cif.schema.mm.IhmLigandProbe

An identifier for the probe.

getProbeId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

An identifier for the probe.

getProbeId() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

A unique identifier for the category.

getProbeLinkType() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

The type of link between the probe and the biomolecule.

getProbeName() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

Author provided name for the probe.

getProbeOrigin() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

The origin of the probe.

getProbeStoichiometry() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

The stoichiometry of the probe labeling site, if known.

getProbPeakValue() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The probability to tell the existence of translational pseudo symmetry.

getProcessDescription() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

Description of the ordered process.

getProcessDetails() - Method in class org.rcsb.cif.schema.core.Exptl

Description of the absorption correction process applied to the measured intensities.

getProcessDetails() - Method in class org.rcsb.cif.schema.core.ExptlAbsorpt

Description of the absorption correction process applied to the measured intensities.

getProcessed() - Method in class org.rcsb.cif.schema.core.Publ

The full manuscript of a paper (excluding possibly the figures and the tables) output in ASCII characters from a word processor.

getProcessed() - Method in class org.rcsb.cif.schema.core.PublManuscript

The full manuscript of a paper (excluding possibly the figures and the tables) output in ASCII characters from a word processor.

getProcessId() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

An identifier for the ordered process.

getProcessing() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used for data processing.

getProcessingFiles() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

File system names for the data processing files.

getProcessingPath() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

File system path to processing data files.

getProcessingSite() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAudit

An identifier for the wwPDB site creating or modifying the component.

getProcessingSite() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

An identifier for the wwPDB site creating or modifying the component.

getProcessingSite() - Method in class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

An identifier for the wwPDB site creating or modifying the family.

getProcessingSite() - Method in class org.rcsb.cif.schema.mm.PdbxPrdAudit

An identifier for the wwPDB site creating or modifying the molecule.

getProcessingVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used for data processing.

getProcessName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

Name of this process step.

getProcessSite() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The site where the file was deposited.

getProductId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

When present, this item should be a globally unique identifier that identifies the final product.

getProfileSegmentFlag() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

A flag that indicates whether or not the SAS profile is segmented i.e., whether the whole SAS profile is used or only a portion of it is used (by masking or by other means) as restraint in the modeling.

getProgram() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

This data item contains the name of the program or library used to compute the descriptor.

getProgram() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

This data item contains the name of the program or library used to compute the identifier.

getProgram() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The program used to calculate the metrics in this category.

getProgram() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

This data item contains the name of the program or library used to compute the descriptor.

getProgramVersion() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

This data item contains the version of the program or library used to compute the descriptor.

getProgramVersion() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

This data item contains the version of the program or library used to compute the identifier.

getProgramVersion() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

This data item contains the version of the program or library used to compute the descriptor.

getProjectName() - Method in class org.rcsb.cif.schema.mm.PdbxSGProject

The value identifies the Structural Genomics project.

getProjMatchingAngularSampling() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Angular sampling of projection matching

getProjMatchingMeritFunction() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Overall figure of merit for projection matching

getProjMatchingNumProjections() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

Number of reference projections used for euler angle assignment

getPromoterType() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

The nature of the promoter controlling expression of the gene.

getProofsIn() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication proofs recieved.

getProofsIn() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication proofs recieved.

getProofsOut() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication proofs sent out.

getProofsOut() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication proofs sent out.

getPropeller() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair propeller parameter.

getPropertiesBiological() - Method in class org.rcsb.cif.schema.core.Chemical

A description of the biological properties of the material.

getPropertiesBiological() - Method in class org.rcsb.cif.schema.mm.Chemical

A free-text description of the biological properties of the material.

getPropertiesPhysical() - Method in class org.rcsb.cif.schema.core.Chemical

A description of the physical properties of the material.

getPropertiesPhysical() - Method in class org.rcsb.cif.schema.mm.Chemical

A free-text description of the physical properties of the material.

getPropertyId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

This uniquely identifies the a property of a sequence feature in the STRUCT_REF_SEQ_FEATURE_PROPx category.

getProtCis() - Method in class org.rcsb.cif.schema.mm.StructMonDetails

An ideal cis peptide bond would have an omega torsion angle of zero.

getProtease() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The name of the protease used for cleavage.

getProtectionFactor() - Method in class org.rcsb.cif.schema.mm.IhmHdxRestraint

The value of the protection factor determined from HDX experiments.

getProteinBindsTo() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

This data item identifies the type of oligonucleotide to which the protein binds.

getProteinChiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of chi angle constraints used in the final structure calculation.

getProteinConcentration() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The final concentration of the protein.

getProteinLength() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The length (or range) of the protein sample under study.

getProteinLocation() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The fraction containing the protein of interest.

getProteinOligomericState() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The oligomeric state of the protein.

getProteinOtherAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of other angle constraints used in the final structure calculation.

getProteinPhiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of phi angle constraints used in the final structure calculation

getProteinProteaseRatio() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

The ratio of protein to protease used for the cleavage.

getProteinPsiAngleConstraintsTotalCount() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraints

The total number of psi angle constraints used in the final structure calculation.

getProteinPurity() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The purity of the protein (percent).

getProteinVolume() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The volume of the fraction containing the protein.

getProteinYield() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The yield in milligrams of protein from the fractionation.

getProteinYield() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The yield of protein in milligrams.

getProteinYieldMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The method used to determine the yield

getProtocol() - Method in class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

The protocol description associated with the protocol_type employed in the production of this entity.

getProtocolId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

An identifier for the modeling protocol, whose post modeling analysis is being carried out.

getProtocolId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

An index for the modeling protocol carried out.

getProtocolId() - Method in class org.rcsb.cif.schema.mm.IhmModelList

An identifier to the modeling protocol that produced the model.

getProtocolName() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocol

The name for the modeling protocol.

getProtocolType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

The one of a set of protocol types associated with the production of this entity.

getProtonShiftsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

A value indicating if 1H chemical shifts are being deposited and if IUPAC chemical shift referencing was used.

getProvenance() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

The provenance of this synonym.

getProvider() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

The provider of the revision.

getPseudorot() - Method in class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

The pseudo rotation angle of this monomer.

getPseudoSiteFlag() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

A flag indicating if the cross link involves a pseudo site that is not part of the model representation and hence will not be part of the model.

getPseudoSiteId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

The pseudo site identifier corresponding to the cross link partner.

getPseudoSiteId() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSiteFeature

The pseudo site identifier corresponding to this feature.

getPsi() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The uncertainty in the crosslinking experimental data; may be approximated to the false positive rate.

getPsi() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

The uncertainty in the crosslinking experimental data; May be approximated to the false positive rate.

getPsi() - Method in class org.rcsb.cif.schema.mm.PdbxRmchOutlier

The Psi value that for the residue that lies outside of the normal region of the rammachandran plot

getPsi() - Method in class org.rcsb.cif.schema.mm.PdbxValidateTorsion

The Psi value that for the residue that lies outside normal limits (in combination with the Phi value) with regards to the rammachandran plot

getPsi() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The value in degrees of the main-chain torsion angle psi.

getPtnr1AuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1AuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1AuthCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 1 of the structure connection.

getPtnr1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 1 of the structure connection.

getPtnr1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr1Role() - Method in class org.rcsb.cif.schema.mm.StructConn

The chemical or structural role of the first partner in the structure connection.

getPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr1_label* to generate the first partner in the structure angle.

getPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

Describes the symmetry operation that should be applied to the atom set specified by _pdbx_struct_link.ptnr1_label* to generate the first partner in the structure connection.

getPtnr1Symmetry() - Method in class org.rcsb.cif.schema.mm.StructConn

Describes the symmetry operation that should be applied to the atom set specified by _struct_conn.ptnr1_label* to generate the first partner in the structure connection.

getPtnr2AuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2AuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2AuthCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAltId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelCompId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 2 of the structure angle.

getPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

A component of the identifier for partner 2 of the structure connection.

getPtnr2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructConn

A component of the identifier for partner 2 of the structure connection.

getPtnr2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr2Role() - Method in class org.rcsb.cif.schema.mm.StructConn

The chemical or structural role of the second partner in the structure connection.

getPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr2_label* to generate the second partner in the structure angle.

getPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

Describes the symmetry operation that should be applied to the atom set specified by _pdbx_struct_link.ptnr2_label* to generate the second partner in the structure connection.

getPtnr2Symmetry() - Method in class org.rcsb.cif.schema.mm.StructConn

Describes the symmetry operation that should be applied to the atom set specified by _struct_conn.ptnr2_label* to generate the second partner in the structure connection.

getPtnr3AuthAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3AuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3AuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3AuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3AuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr3LabelAltId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 1 of the structure angle.

getPtnr3PDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

A component of the identifier for partner 3 of the structure angle.

getPtnr3Symmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr3_label* to generate the first partner in the structure angle.

getPubl() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Data items in the PUBL category are used when submitting a manuscript for publication.

getPubl() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PUBL category are used when submitting a manuscript for publication.

getPublAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of data items recording the author information.

getPublAuthor() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PUBL_AUTHOR category record details of the authors of a manuscript submitted for publication.

getPublBody() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Data items in the PUBL_BODY category permit labelling of different text sections within the body of a submitted paper.

getPublBody() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PUBL_BODY category permit the labelling of different text sections within the body of a paper.

getPublContactAuthor() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items describing contact author(s) details.

getPublFlag() - Method in class org.rcsb.cif.schema.core.GeomAngle

Code signals if the angle is referred to in a publication or should be placed in a table of significant angles.

getPublFlag() - Method in class org.rcsb.cif.schema.core.GeomBond

This code signals whether the angle is referred to in a publication or should be placed in a table of significant angles.

getPublFlag() - Method in class org.rcsb.cif.schema.core.GeomContact

This code signals whether the contact distance is referred to in a publication or should be placed in a list of significant contact distances.

getPublFlag() - Method in class org.rcsb.cif.schema.core.GeomHbond

This code signals whether the hydrogen-bond information is referred to in a publication or should be placed in a table of significant hydrogen-bond geometry.

getPublFlag() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Code signals if the torsion angle is required for publication.

getPublFlag() - Method in class org.rcsb.cif.schema.mm.GeomAngle

This code signals whether the angle is referred to in a publication or should be placed in a table of significant angles.

getPublFlag() - Method in class org.rcsb.cif.schema.mm.GeomBond

This code signals whether the bond distance is referred to in a publication or should be placed in a list of significant bond distances.

getPublFlag() - Method in class org.rcsb.cif.schema.mm.GeomContact

This code signals whether the contact distance is referred to in a publication or should be placed in a list of significant contact distances.

getPublFlag() - Method in class org.rcsb.cif.schema.mm.GeomHbond

This code signals whether the hydrogen-bond information is referred to in a publication or should be placed in a table of significant hydrogen-bond geometry.

getPublFlag() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

This code signals whether the torsion angle is referred to in a publication or should be placed in a table of significant torsion angles.

getPublication() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The DICTIONARY group encompassing the CORE PUBLICATION data items defined and used with in the Crystallographic Information Framework (CIF).

getPublicationAbbrev() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

Abbreviated name of the reference publication.

getPublicationMaterial() - Method in class org.rcsb.cif.schema.core.Computing

Brief description of software used for publication material.

getPublicationMaterial() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for generating material for publication.

getPublisher() - Method in class org.rcsb.cif.schema.core.Citation

The name of the publisher of the cited work.

getPublManuscript() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of items describing the publication manuscript.

getPublManuscriptIncl() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getPublManuscriptIncl() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the PUBL_MANUSCRIPT_INCL category allow the authors of a manuscript submitted for publication to list data names that should be added to the standard request list used by the journal printing software.

getPublManuscriptInclExtra() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Category of data items that allow the authors of a manuscript to submit for publication data names that should be added to the standard request list employed by journal printing software.

getPublRequested() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

CATEGORY of data items that enable the author to make specific requests to the journal office for processing.

getPublSection() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Manuscript section data if submitted in parts.

getPulseDuration() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The average duration (femtoseconds) of the pulse energy measured at the sample.

getPulseEnergy() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The energy/pulse of the X-ray pulse impacting the sample measured in microjoules.

getPulsePhotonEnergy() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The photon energy of the X-ray pulse measured in KeV.

getPurificationDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

Details of any purification of the product.

getPurificationDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

String value containing details of any purification of the product of the digestion.

getPurificationDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

String value containing details of any purification of the product of the PCR reaction.

getQualityIndicator() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The value indicates any problems with this group of atoms.

getQuantBitSize() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The number of bits per pixel.

getR() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

A matrix containing the symmetry rotation operations of a space group | r11 r12 r13 | R = | r21 r22 r23 | | r31 r32 r33 |

getRadiation() - Method in class org.rcsb.cif.schema.core.CellMeasurement

Description of the radiation used to measure the unit-cell data.

getRadiation() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

Description of the radiation used to measure the unit-cell data.

getRadiationSourceSpecific() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The particular source of radiation.

getRadiationWavelength() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The mean wavelength of the radiation used to measure this data set.

getRadius() - Method in class org.rcsb.cif.schema.mm.IhmPseudoSite

The radius associated with the pseudo site, if applicable.

getRadiusBond() - Method in class org.rcsb.cif.schema.core.AtomType

The effective intra-molecular bonding radius of this atom type.

getRadiusBond() - Method in class org.rcsb.cif.schema.core.ModelSite

Atomic radius of atom located at this site.

getRadiusBond() - Method in class org.rcsb.cif.schema.mm.AtomType

The effective intramolecular bonding radius in angstroms of this atom type.

getRadiusContact() - Method in class org.rcsb.cif.schema.core.AtomType

The effective inter-molecular bonding radius of this atom type.

getRadiusContact() - Method in class org.rcsb.cif.schema.core.ModelSite

Atomic contact radius of atom specie located at this site.

getRadiusContact() - Method in class org.rcsb.cif.schema.mm.AtomType

The effective intermolecular bonding radius in angstroms of this atom type.

getRadiusOfGyration() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

Radius of gyration obtained from the SAS profile, if used as input restraint.

getRadiusR() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

Radius "r" of the sphere.

getRamachandranAllowedNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Number of allowed residues in Ramachandran plot.

getRamachandranAllowedPercent() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Percentage of allowed residues in Ramachandran plot.

getRamachandranFavoredNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Number of favored residues in Ramachandran plot.

getRamachandranFavoredPercent() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Percentage of favored residues in Ramachandran plot.

getRamachandranOutlierNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Number of outliers in Ramachandran plot.

getRamachandranOutlierPercent() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Percentage of outliers in Ramachandran plot.

getRandomConicalTiltAngle() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Angular difference between the conical tilt images used to generate the startup model

getRandomConicalTiltNumImages() - Method in class org.rcsb.cif.schema.mm.EmStartModel

number of images used to generate the random conical tilt startup model

getRandomExclusionFraction() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The fraction of randomly excluded distance restraints during modeling.

getRange1AuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1AuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1AuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1AuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1BegAuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the first hydrogen bond between two residue ranges in a sheet.

getRange1BegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the first hydrogen bond between two residue ranges in a sheet.

getRange1BegLabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the first hydrogen bond between two residue ranges in a sheet.

getRange1BegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the first hydrogen bond between two residue ranges in a sheet.

getRange1EndAuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the last hydrogen bond between two residue ranges in a sheet.

getRange1EndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the last hydrogen bond between two residue ranges in a sheet.

getRange1EndLabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the last hydrogen bond between two residue ranges in a sheet.

getRange1EndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the first partner of the last hydrogen bond between two residue ranges in a sheet.

getRange1LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange1PDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the first partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2AuthAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2AuthAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2AuthCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2AuthSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2BegAuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the first hydrogen bond between two residue ranges in a sheet.

getRange2BegAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the first hydrogen bond between two residue ranges in a sheet.

getRange2BegLabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the first hydrogen bond between two residue ranges in a sheet.

getRange2BegLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the first hydrogen bond between two residue ranges in a sheet.

getRange2EndAuthAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the last hydrogen bond between two residue ranges in a sheet.

getRange2EndAuthSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the last hydrogen bond between two residue ranges in a sheet.

getRange2EndLabelAtomId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the last hydrogen bond between two residue ranges in a sheet.

getRange2EndLabelSeqId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

A component of the identifier for the residue for the second partner of the last hydrogen bond between two residue ranges in a sheet.

getRange2LabelAsymId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2LabelAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2LabelCompId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2LabelSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRange2PDBInsCode() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

A component of the residue identifier for the second partner of the registration hydrogen bond between two residue ranges in a sheet.

getRangeId1() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId1() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId1() - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId1() - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId2() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId2() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId2() - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRangeId2() - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.

getRank() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The rank of the chemical shift reference.

getRatio() - Method in class org.rcsb.cif.schema.core.AtomSite

Ratio of the maximum to minimum eigenvalues of the atomic displacement (thermal) ellipsoids.

getRatio() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

Ratio of the maximum to minimum eigenvalues of the atomic displacement (thermal) ellipsoids.

getRatio() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

Ratio of the maximum to minimum eigenvalues of the atomic displacement (thermal) ellipsoids.

getRatio() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

Ratio of the maximum to minimum principal axes of displacement (thermal) ellipsoids.

getRatioOneWl() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

The root-mean-square Bijvoet difference at one wavelength for all reflections.

getRatioOneWlCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

The root-mean-square Bijvoet difference at one wavelength for centric reflections.

getRatioTwoWl() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

The root-mean-square dispersive Bijvoet difference between two wavelengths for all reflections.

getRcsbAnnotator() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The initials of the annotator processing this entry.

getRcsbId() - Method in class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

This data item holds a RCSB ID code.

getRCullis() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.R_cullis records R_cullis for MAD phasing.

getRCullis() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_cullis records R_cullis for MAD phasing.

getRCullis() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.R_cullis records R_cullis for MAD phasing.

getRCullis() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

Residual factor R~cullis~ for centric reflections for this derivative in this shell.

getRCullis() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

Residual factor R~cullis~ for centric reflections in this shell.

getRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.R_cullis_acentric records R_cullis using acentric data for MAD phasing.

getRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_cullis_acentric records R_cullis using acentric data for MAD phasing.

getRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.R_cullis_acentric records R_cullis using acentric data for MAD phasing.

getRCullisAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

Residual factor R~cullis,acen~ for acentric reflections for this derivative.

getRCullisAnomalous() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

Residual factor R~cullis,ano~ for anomalous reflections for this derivative.

getRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.R_cullis_centric records R_cullis using centric data for MAD phasing.

getRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_cullis_centric records R_cullis using centric data for MAD phasing.

getRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.R_cullis_centric records R_cullis using centric data for MAD phasing.

getRCullisCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

Residual factor R~cullis~ for centric reflections for this derivative.

getReactionDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

String value containing details of the PCR reaction.

getReactiveProbeChemCompDescriptorId() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

The identifier for the chemical descriptor of the reactive probe.

getReactiveProbeFlag() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

Indicate whether the probe has a reactive form.

getReactiveProbeName() - Method in class org.rcsb.cif.schema.mm.IhmProbeList

Author provided name for the reactive_probe, if applicable.

getRealSpaceR() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

The overall real space R factor.

getRealSpaceR() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The Real Space Rfactor (RSR) for the residue.

getRealSpaceR() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

The overall Real Space Rfactor (RSR) for the structure.

getRealSpaceR() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Real space R factor of electron density for each component, residue side chain, or main chain.

getRealSpaceRMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Real space R factor of electron density for each component, residue side chain, or main chain.

getRealSpaceROverall() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The overall real space R factor.

getRealSpaceRSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

Real space R factor of electron density for each component, residue side chain, or main chain.

getRealSpaceRSigma() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

The overall standard deviation of the Real Space Rfactor (RSR) for the structure.

getRealSpaceZscore() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The Zscore of the Real Space Rfactor (RSRZ) for the residue.

getReason() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

The reason why the residues are missing in the structural model.

getReasonForInterest() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthClassification

Provides the reason that a particular assembly is being studied

getRecdCopyright() - Method in class org.rcsb.cif.schema.core.Journal

Date completed copyright recieved.

getRecdCopyright() - Method in class org.rcsb.cif.schema.core.JournalDate

Date completed copyright recieved.

getRecdElectronic() - Method in class org.rcsb.cif.schema.core.Journal

Date publication recieved electronically.

getRecdElectronic() - Method in class org.rcsb.cif.schema.core.JournalDate

Date publication recieved electronically.

getRecdHardCopy() - Method in class org.rcsb.cif.schema.core.Journal

Date publication recieved as hard copy.

getRecdHardCopy() - Method in class org.rcsb.cif.schema.core.JournalDate

Date publication recieved as hard copy.

getReceiver() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The name of the receiver.

getReceiverAddressEmail() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The email address of the receiver.

getReceiverAddressFax() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The FAX phone number of the receiver.

getReceiverAddressMail() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The postal address of the receiver.

getReceiverAddressPhone() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The phone number of the receiver.

getReciprocalAngleAlpha() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the angle between _cell.length_b and _cell.length_c.

getReciprocalAngleAlpha() - Method in class org.rcsb.cif.schema.mm.Cell

The angle (recip-alpha) defining the reciprocal cell in degrees.

getReciprocalAngleAlphaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_b and _cell.length_c.

getReciprocalAngleAlphaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_angle_alpha.

getReciprocalAngleAlphaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_b and _cell.length_c.

getReciprocalAngleBeta() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the angle between _cell.length_a and _cell.length_c.

getReciprocalAngleBeta() - Method in class org.rcsb.cif.schema.mm.Cell

The angle (recip-beta) defining the reciprocal cell in degrees.

getReciprocalAngleBetaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_a and _cell.length_c.

getReciprocalAngleBetaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_angle_beta.

getReciprocalAngleBetaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_a and _cell.length_c.

getReciprocalAngleGamma() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the angle between _cell.length_a and _cell.length_b.

getReciprocalAngleGamma() - Method in class org.rcsb.cif.schema.mm.Cell

The angle (recip-gamma) defining the reciprocal cell in degrees.

getReciprocalAngleGammaEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_a and _cell.length_b.

getReciprocalAngleGammaEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_angle_gamma.

getReciprocalAngleGammaSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the Reciprocal of the angle between _cell.length_a and _cell.length_b.

getReciprocalLengthA() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.length_a.

getReciprocalLengthA() - Method in class org.rcsb.cif.schema.mm.Cell

The reciprocal cell length (recip-a) in inverse Angstroms.

getReciprocalLengthAEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_a.

getReciprocalLengthAEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_length_a.

getReciprocalLengthASu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_a.

getReciprocalLengthB() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.length_b.

getReciprocalLengthB() - Method in class org.rcsb.cif.schema.mm.Cell

The reciprocal cell length (recip-b) in inverse Angstroms.

getReciprocalLengthBEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_b.

getReciprocalLengthBEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_length_b.

getReciprocalLengthBSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_b.

getReciprocalLengthC() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.length_c.

getReciprocalLengthC() - Method in class org.rcsb.cif.schema.mm.Cell

The reciprocal cell length (recip-c) in inverse Angstroms.

getReciprocalLengthCEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_c.

getReciprocalLengthCEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The estimated standard deviation of _cell.reciprocal_length_c.

getReciprocalLengthCSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard Uncertainty of the reciprocal of the _cell.length_c.

getReciprocalMetricTensor() - Method in class org.rcsb.cif.schema.core.Cell

The reciprocal (contravariant) metric tensor used to transform vectors and coordinates from reciprocal space to real (direct) space.

getReciprocalOrthogonalMatrix() - Method in class org.rcsb.cif.schema.core.Cell

Orthogonal matrix of the reciprocal space.

getReciprocalVectorA() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.vector_a.

getReciprocalVectorB() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.vector_b.

getReciprocalVectorC() - Method in class org.rcsb.cif.schema.core.Cell

Reciprocal of the _cell.vector_c.

getRecombinationEnzymes() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

The names of the enzymes used for this recombination step.

getReconstructionMethod() - Method in class org.rcsb.cif.schema.mm.EmExperiment

The reconstruction method used in the EM experiment.

getRecordingTemperatureMaximum() - Method in class org.rcsb.cif.schema.mm.EmImaging

The specimen temperature maximum (degrees Kelvin) for the duration of imaging.

getRecordingTemperatureMinimum() - Method in class org.rcsb.cif.schema.mm.EmImaging

The specimen temperature minimum (degrees Kelvin) for the duration of imaging.

getRecordName() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePdbOmit

PDB record or REMARK name to be omitted.

getRecrystallizationMethod() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Method used to recrystallize the sample.

getRecvdAuthorApproval() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the author's approval for an entry has been received.

getRecvdChemicalShifts() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the chemical shift data for an entry have been received.

getRecvdCoordinates() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the coordinates for an entry have been received.

getRecvdDepositForm() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the deposition form for an entry has been received.

getRecvdInitialDepositionDate() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The date of initial deposition.

getRecvdInternalApproval() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the internal approval for an entry have been received.

getRecvdManuscript() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the manuscript for an entry has been received.

getRecvdNmrConstraints() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the NMR contraint data for an entry have been received.

getRecvdNmrData() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the unified NMR data for an entry have been received.

getRecvdStructFact() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the structure factors for an entry have been received.

getRed() - Method in class org.rcsb.cif.schema.core.DisplayColour

Integer value between 0 and 255 giving the intensity of a specific colour component (red, green or blue) for the RGB display colour code.

getReductionProcess() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

How intensities were reduced to structure-factor magnitudes.

getReductionProcess() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

A description of the process used to reduce the intensity data into structure-factor magnitudes.

getRedundancy() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The overall redundancy for the resolution shell.

getRedundancyReflnsAll() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The ratio of the total number of observations of the reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low to the number of crystallographically unique reflections that satisfy the same limits.

getRedundancyReflnsObs() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The ratio of the total number of observations of the reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation criterion established by _reflns.observed_criterion to the number of crystallographically unique reflections that satisfy the same limits.

getRefCorrectionType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

If a correction value is applied to calculate the reported chemical shifts the source of the correction (pH; temperature; etc.).

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

The value of _pdbx_reference_entity_list.ref_entity_id is a unique identifier the a constituent entity within this reference molecule.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

The value of _pdbx_reference_entity_nonpoly.ref_entity_id is a reference to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

The value of _pdbx_reference_entity_poly.ref_entity_id is a reference to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The reference entity id of the polymer entity containing the linkage.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

The value of _pdbx_reference_entity_poly_seq.ref_entity_id is a reference to _pdbx_reference_entity_poly.ref_entity_id in PDBX_REFERENCE_ENTITY_POLY category.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

The value of _pdbx_reference_entity_sequence.ref_entity_id is a reference to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.

getRefEntityId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The value of _pdbx_reference_entity_src_nat.ref_entity_id is a reference to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.

getRefEntityId1() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The reference entity id of the first of the two entities joined by the linkage.

getRefEntityId2() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The reference entity id of the second of the two entities joined by the linkage.

getReference() - Method in class org.rcsb.cif.schema.core.ValenceRef

Literature reference from which the valence parameters identified by _valence_param.id were taken

getReference() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

The external reference or the Digital Object Identifier (DOI).

getReference() - Method in class org.rcsb.cif.schema.mm.StructConfType

A literature reference that defines the criteria used to assign this conformation type and subtype.

getReference() - Method in class org.rcsb.cif.schema.mm.StructConnType

A reference that specifies the criteria used to define the interaction.

getReference() - Method in class org.rcsb.cif.schema.mm.ValenceRef

Literature reference from which the valence parameters identified by _valence_param.id were taken.

getReferenceCitationStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate status about reference citation data.

getReferenceId() - Method in class org.rcsb.cif.schema.mm.IhmExternalFiles

A pointer to the source of the external file - either DOI or locally stored.

getReferenceId() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

A unique identifier for the external reference.

getReferenceModel() - Method in class org.rcsb.cif.schema.mm.EmParticleSelection

Description of reference model used for particle selection

getReferenceModel() - Method in class org.rcsb.cif.schema.mm.EmVolumeSelection

Description of reference model used for volume selection

getReferenceProvider() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

The name of the reference provider.

getReferences() - Method in class org.rcsb.cif.schema.core.Publ

The references section of the submitted paper.

getReferences() - Method in class org.rcsb.cif.schema.core.PublSection

The references section of the submitted paper.

getReferenceType() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

The type of external reference.

getRefersTo() - Method in class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

The type of object that the external reference points to, usually a single file or an archive.

getRefId() - Method in class org.rcsb.cif.schema.core.ValenceParam

Code linking parameters to the key _valence_ref.id key in the reference list in category VALENCE_REF.

getRefId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

This data item is a unique identifier for reference sequence information.

getRefId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

This data item is a pointer to _struct_ref_seq.ref_id in the STRUCT_REF_SEQ_DEPOSITOR_INFO category.

getRefId() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

This data item is a pointer to _struct_ref.id in the STRUCT_REF category.

getRefId() - Method in class org.rcsb.cif.schema.mm.ValenceParam

An identifier which links to the reference to the source from which the bond-valence parameters are taken.

getRefine() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify information about the refinement of the structural model.

getRefine() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE category record details about the structure-refinement parameters.

getRefineAnalyze() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_ANALYZE category record details about the refined structure that are often used to analyze the refinement and assess its quality.

getRefineBIso() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_B_ISO category record details about the treatment of isotropic B factors (displacement parameters) during refinement.

getRefineDiff() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the electron density limits in a difference Fourier map after the structure has been refined.

getRefineFunctMinimized() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_FUNCT_MINIMIZED category record details about the individual terms of the function minimized during refinement.

getRefineHist() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_HIST category record details about the steps during the refinement of the structure.

getRefineLs() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify information about the refinement of the structural model.

getRefineLsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify information about the refinement of the structural model.

getRefineLsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_LS_CLASS category record details about the reflections used for the structure refinement for each reflection class separately.

getRefineLsRestr() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_LS_RESTR category record details about the restraints applied to various classes of parameters during the least-squares refinement.

getRefineLsRestrNcs() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_LS_RESTR_NCS category record details about the restraints applied to atom positions in domains related by noncrystallographic symmetry during least-squares refinement, and also about the deviation of the restrained atomic parameters at the end of the refinement.

getRefineLsRestrType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_LS_RESTR_TYPE category record details about the restraint types used in the least-squares refinement.

getRefineLsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_LS_SHELL category record details about the results of the least-squares refinement broken down into shells of resolution.

getRefinement() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used for refinement.

getRefinementFlags() - Method in class org.rcsb.cif.schema.core.AtomSite

A concatenated series of single-letter codes which indicate the refinement restraints or constraints applied to this site.

getRefinementFlags() - Method in class org.rcsb.cif.schema.mm.AtomSite

A concatenated series of single-letter codes which indicate the refinement restraints or constraints applied to this site.

getRefinementFlagsAdp() - Method in class org.rcsb.cif.schema.core.AtomSite

A code which indicates the refinement restraints or constraints applied to the atomic displacement parameters of this site.

getRefinementFlagsAdp() - Method in class org.rcsb.cif.schema.mm.AtomSite

A code which indicates the refinement restraints or constraints applied to the atomic displacement parameters of this site.

getRefinementFlagsOccupancy() - Method in class org.rcsb.cif.schema.core.AtomSite

A code which indicates the refinement restraints or constraints applied to the occupancy of this site.

getRefinementFlagsOccupancy() - Method in class org.rcsb.cif.schema.mm.AtomSite

A code which indicates that refinement restraints or constraints were applied to the occupancy of this site.

getRefinementFlagsPosn() - Method in class org.rcsb.cif.schema.core.AtomSite

A code which indicates the refinement restraints or constraints applied to the positional coordinates of this site.

getRefinementFlagsPosn() - Method in class org.rcsb.cif.schema.mm.AtomSite

A code which indicates the refinement restraints or constraints applied to the positional coordinates of this site.

getRefinementStatus() - Method in class org.rcsb.cif.schema.core.Refln

Status code of reflection in the structure refinement process.

getRefinementStatus() - Method in class org.rcsb.cif.schema.mm.Refln

Status of a reflection in the structure-refinement process.

getRefinementType() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

type of refinement performed in order to determine map resolution

getRefinementVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used for refinement.

getRefineOccupancy() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFINE_OCCUPANCY category record details about the treatment of atom occupancies during refinement.

getRefineTlsId() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

This data item is a pointer to _pdbx_refine_tls.id in the REFINE_TLS category.

getReflectionStatusArchived() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Whether the status is of reflection is archived (Y) or not (N).

getReflectionStatusUsed() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Whether the status of the reflection is used (Y) or not (N).

getRefln() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe the reflection data used in the refinement of a crystallographic structure model.

getRefln() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLN category record details about the reflection data used to determine the ATOM_SITE data items.

getReflns() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify parameters for the complete set of reflections used in the structure refinement process.

getReflns() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLNS category record details about the reflection data used to determine the ATOM_SITE data items.

getReflns() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.reflns identifies the number of centric and acentric reflections.

getReflns() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.reflns identifies the number of centric and acentric reflections with resolution shells.

getReflns() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.reflns records the number of reflections used for MAD phasing.

getReflns() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.reflns records the number of reflections used for MAD phasing.

getReflns() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.reflns records the number of reflections used for MAD phasing.

getReflns() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The total number of reflections phased in the native data set.

getReflns() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

The number of reflections in this shell.

getReflns() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The number of reflections in this shell.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.reflns_acentric identifies the number of acentric reflections.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.reflns_acentric identifies the number of acentric reflections with resolution shells.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.reflns_acentric records the number of acentric reflections for MAD phasing.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.reflns_acentric records the number of acentric reflections for MAD phasing.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.reflns_acentric records the number of acentric reflections for MAD phasing.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The number of acentric reflections phased in the native data set.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The number of acentric reflections used in phasing for this derivative.

getReflnsAcentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The number of acentric reflections in this shell.

getReflnsAnomalous() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The number of anomalous reflections used in phasing for this derivative.

getReflnsAnomalous() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The number of anomalous reflections in this shell.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDm

The value of _pdbx_phasing_dm.reflns_centric identifies the number of centric reflections.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

The value of _pdbx_phasing_dm_shell.reflns_centric identifies the number of centric reflections with resolution shells.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.reflns_centric records the number of centric reflections for MAD phasing.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.reflns_centric records the number of centric reflections for MAD phasing.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.reflns_centric records the number of centric reflections for MAD phasing.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

The number of centric reflections phased in the native data set.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

The number of centric reflections used in phasing for this derivative.

getReflnsCentric() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

The number of centric reflections in this shell.

getReflnsClass() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the properties of reflections in specific classes of reflections.

getReflnsClass() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLNS_CLASS category record details of the reflections used to determine the structural parameters for each reflection class.

getReflnsCriteria() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDer

Criteria used to limit the reflections used in the phasing calculations.

getReflnsCriterion() - Method in class org.rcsb.cif.schema.mm.PhasingMIR

Criterion used to limit the reflections used in the phasing calculations.

getReflnsPercentRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.reflns_percent_rotation identifies the completness of data used for rotation search.

getReflnsPercentTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.reflns_percent_translation identifies the completness of data used for translation search.

getReflnsScale() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the scales needed to place measured structure factor coefficients on the same absolute scale.

getReflnsScale() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLNS_SCALE category record details about the structure-factor scales.

getReflnsShell() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items which specify the information about reflections divided into shells bounded by d resolution limits.

getReflnsShell() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLNS_SHELL category record details about the reflection data used to determine the ATOM_SITE data items broken down into shells of resolution.

getReflnsTwin() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Boolean (Y/N) whether the twin is reported.

getReflnsUsed() - Method in class org.rcsb.cif.schema.core.CellMeasurement

Total number of reflections used to determine the unit cell.

getReflnsUsed() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The total number of reflections used to determine the unit cell.

getReflnSysAbs() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the REFLN_SYS_ABS category record details about the reflection data that should be systematically absent, given the designated space group.

getRefMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The chemical shift reference may be either internal (the compound is located in the sample) or external (the compound is in a container external to the sample).

getRefoldBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getRefProtocol() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The refinement protocol used.

getRefSpace() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

A flag to indicate whether fitting was carried out in real or reciprocal refinement space.

getRefType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

The reference type may be either direct (against a value measured with a chemical compound) or indirect (calculated from chemical shift ratios).

getRejects() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The number of rejected reflections in the resolution shell

getRejects() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

The number of parameters of this type that deviate from ideal values by more than the amount defined in _refine_ls_restr.criterion in the model obtained by restrained least-squares refinement.

getRelatedAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

The atom identifier/name for the atom mapping in the related chemical component

getRelatedCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

The related chemical component for which this chemical component is based.

getRelatedCompId() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompRelated

The related chemical component for which this chemical component is based.

getRelatedDatabaseCode() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

A database code closely related to the current deposition.

getRelatedDatabaseName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The name of the database associated with the related database code.

getRelatedLiterature() - Method in class org.rcsb.cif.schema.core.Publ

The related literature section of the submitted paper.

getRelatedLiterature() - Method in class org.rcsb.cif.schema.core.PublSection

The related literature section of the submitted paper.

getRelatedType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

Describes the type of relationship

getRelation() - Method in class org.rcsb.cif.schema.core.DatabaseRelated

The general relationship of the data in the data block to the dataset referred to in the database.

getRelationship() - Method in class org.rcsb.cif.schema.mm.EmDbReference

Indicates relationship of this entry with other entries in PDB and EMDB.

getRelationshipType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompRelated

Describes the type of relationship

getReleaseStatus() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Defines the current PDB release status for this molecule definition.

getReleaseStatus() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

Assigns the current PDB release status for this family.

getRepAtom() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

If _ihm_poly_residue_feature.granularity is by-residue, then indicate the atom used to represent the residue in three-dimension.

getRepAtom1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

If _ihm_predicted_contact_restraint.model_granularity is by-residue, then indicate the atom used to represent the first monomer partner in three-dimension.

getRepAtom2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

If _ihm_predicted_contact_restraint.model_granularity is by-residue, then indicate the atom used to represent the second monomer partner in three-dimension.

getReplacedBy() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The PDB code for a subsequent PDB entry that replaced the PDB file corresponding to this data block.

getReplacedBy() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Assigns the identifier of the reference molecule that has replaced this molecule.

getReplacedBy() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

Assigns the identifier of the family that has replaced this component.

getReplacedEntryId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The NDB ID that this entry replaced.

getReplaceExistingEntryFlag() - Method in class org.rcsb.cif.schema.mm.EmAdmin

This item indicates that the current entry replaced a previously released structure.

getReplacePdbId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

The PDB identifier for the replaced (OLD) entry/entries.

getReplacePdbId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The PDB ID code of the entry that is superseded by this entry.

getReplaces() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The PDB code for a previous PDB entry that was replaced by the PDB file corresponding to this data block.

getReplaces() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Assigns the identifier for the reference molecule which have been replaced by this reference molecule.

getReplaces() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

Assigns the identifier for the family which have been replaced by this family.

getRepresentAs() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Defines how this entity is represented in PDB data files.

getRepresentationId() - Method in class org.rcsb.cif.schema.mm.IhmModelList

An identifier to the multi-scale model representation id of the model.

getRepresentationId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

An identifier that collects or groups together a set of representations.

getRepresentativeConformer() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

The number of the conformer identified as most representative.

getRepresentativeConformer() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

The index of the representative conformer among the submitted conformers for the entry

getRepresentativePDBIdCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

The PDB accession code for the entry containing a representative example of this molecule.

getRequestedAccessionTypes() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

Comma separated list of requested accession code types.

getRequestedCategory() - Method in class org.rcsb.cif.schema.core.Publ

The category of paper submitted.

getRequestedCategory() - Method in class org.rcsb.cif.schema.mm.Publ

The category of paper submitted.

getRequestedCoeditorName() - Method in class org.rcsb.cif.schema.core.Publ

The name of the Co-editor whom the authors would like to process the submitted manuscript.

getRequestedCoeditorName() - Method in class org.rcsb.cif.schema.mm.Publ

The name of the co-editor whom the authors would like to handle the submitted manuscript.

getRequestedJournal() - Method in class org.rcsb.cif.schema.core.Publ

Name of the journal to which the manuscript is being submitted.

getRequestedJournal() - Method in class org.rcsb.cif.schema.mm.Publ

The name of the journal to which the manuscript is being submitted.

getResidual() - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

The residual for this term of the function that was minimized during the refinement.

getResidualBFactorsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

A flag to indicate if the uploaded data is contains residual B-values

getResidualTilt() - Method in class org.rcsb.cif.schema.mm.EmImaging

residual tilt of the electron beam

getResidueName() - Method in class org.rcsb.cif.schema.mm.PdbxUnpair

Name of residue which does not pair.

getResidueNames() - Method in class org.rcsb.cif.schema.mm.PdbxHybrid

List of residues + number (see example) which have the same sugar group in a particular strand.

getResidueNumber() - Method in class org.rcsb.cif.schema.mm.PdbxUnpair

Number of residue which does not pair.

getResidueRangeBegin() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

Structure statistics are often calculated only over the well-ordered region(s) of the biopolymer.

getResidueRangeEnd() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

The ending residue number: e.g.

getResidueRangeGranularity() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The coarse-graining information, if the feature is a residue range.

getResName() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Unique (typically 3-letter code) identifier for chemical group.

getResName() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Unique (typically 3-letter code) identifier for chemical group.

getResName() - Method in class org.rcsb.cif.schema.mm.PdbxConnectModification

Unique (typically 3-letter code) identifier for chemical group.

getResName() - Method in class org.rcsb.cif.schema.mm.PdbxConnectType

Unique (typically 3-letter code) identifier for chemical group.

getResolution() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The final resolution (in Angstroms)of the 3D reconstruction.

getResolutionFull() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The resolution at which the measured reflection count is close to complete.

getResolutionMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Maximum resolution of the measured diffraction pattern.

getResolutionMethod() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The method used to determine the final resolution of the 3d reconstruction.

getResolutionRange() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Resolution range.

getRestrainedSAll() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S' for all reflections after the final cycle of least squares.

getRestrainedSAll() - Method in class org.rcsb.cif.schema.core.RefineLs

Least-squares goodness-of-fit parameter S' for all reflections after the final cycle of least squares.

getRestrainedSGt() - Method in class org.rcsb.cif.schema.core.Refine

Least-squares goodness-of-fit parameter S' for significantly intense reflections (satisfying _reflns.threshold_expression) after the final cycle of least squares.

getRestrainedSGt() - Method in class org.rcsb.cif.schema.core.RefineLs

Least-squares goodness-of-fit parameter S' for significantly intense reflections (satisfying _reflns.threshold_expression) after the final cycle of least squares.

getRestraintId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Identifier to the 2dem class average restraint.

getRestraintId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

An identifier for the crosslink restraint between a pair of residues.

getRestraintId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResult

An identifier for the crosslink restraint between a pair of residues.

getRestraintId() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

An identifier for the crosslink restraint between a pair of residues.

getRestraints() - Method in class org.rcsb.cif.schema.core.AtomSite

A description of restraints applied to specific parameters at this site during refinement.

getRestraints() - Method in class org.rcsb.cif.schema.mm.AtomSite

A description of restraints applied to specific parameters at this site during refinement.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The type of the cross link restraint applied.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

The type of angle restraint applied.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

The type of dihedral restraint applied.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

The type of distance restraint applied.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

The type of restraint applied.

getRestraintType() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The type of distance restraint applied.

getRestrictionEnzyme1() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

The first enzyme used in the restriction digestion.

getRestrictionEnzyme2() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

The second enzyme used in the restriction digestion.

getResult() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

The result from this method of protein characterisation.

getReversePrimerId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.

getRevisionDate() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

The release date of the revision

getRevisionDate() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

A date for the current version or revision.

getRevisionDescription() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

A description of the revision to this entry.

getRevisionId() - Method in class org.rcsb.cif.schema.core.Audit

A unique block code identifier for each revision.

getRevisionId() - Method in class org.rcsb.cif.schema.mm.Audit

The value of _audit.revision_id must uniquely identify a record in the AUDIT list.

getRevisionId() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

The NDB ID for entry that replaces this entry.

getRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

A pointer to _pdbx_audit_revision_history.ordinal

getRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

A pointer to _pdbx_audit_revision_history.ordinal

getRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

A pointer to _pdbx_audit_revision_history.ordinal

getRevisionOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

A pointer to _pdbx_audit_revision_history.ordinal

getRevisionType() - Method in class org.rcsb.cif.schema.mm.PdbxVersion

The content type that associated with the revision.

getRevNum() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRevRecord

This data item is a pointer to _database_PDB_rev.num in the DATABASE_PDB_REV category.

getRFactor() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.R_factor identifies the R factor (defined as uasual) after rotation and translation.

getRFactorAll() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getRFactorAll() - Method in class org.rcsb.cif.schema.core.RefineLs

Residual factor for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getRFactorAll() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Residual factor for reflections in this class included in the refinement.

getRFactorAll() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Residual factor for reflections in this class used in refinement.

getRFactorAll() - Method in class org.rcsb.cif.schema.mm.RefineHist

Residual factor R for reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low.

getRFactorAll() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the residual factor for all reflections satisfying the resolution limits established by _refine_ls_class.d_res_high and _refine_ls_class.d_res_low.

getRFactorAll() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Residual factor R for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low.

getRFactorAll() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the residual factor for all reflections included in the refinement.

getRFactorAll4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

R-value (all reflections, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getRFactorAllLinear() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

Total linear R factor in data processing.

getRFactorAllNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

R-value (all reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getRFactorGt() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor for the reflections judged significantly intense (see _reflns.number_gt and _reflns.threshold_expression) and included in the refinement.

getRFactorGt() - Method in class org.rcsb.cif.schema.core.RefineLs

Residual factor for the reflections judged significantly intense (see _reflns.number_gt and _reflns.threshold_expression) and included in the refinement.

getRFactorGt() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Residual factor for the reflections in this class judged significantly intense (see _reflns.threshold_expression) and included in refinement.

getRFactorGt() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Residual factor for the reflections in this class judged significantly intense (i.e.

getRFactorGt() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the residual factor for significantly intense reflections (see _reflns.threshold_expression) included in the refinement.

getRFactorGt() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the residual factor for significantly intense reflections (see _reflns.threshold_expression) included in the refinement.

getRFactorObs() - Method in class org.rcsb.cif.schema.mm.RefineHist

Residual factor R for reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation criterion established by _reflns.observed_criterion.

getRFactorObs() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Residual factor R for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation criterion established by _reflns.observed_criterion.

getRFactorObs4sigCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

R-value (working set, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getRFactorObsNoCutoff() - Method in class org.rcsb.cif.schema.mm.PdbxRefine

R-value (working set reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

getRFactorRFree() - Method in class org.rcsb.cif.schema.mm.RefineHist

Residual factor R for reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getRFactorRFree() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Residual factor R for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getRFactorRFreeError() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

The estimated error in _refine_ls_shell.R_factor_R_free.

getRFactorRWork() - Method in class org.rcsb.cif.schema.mm.RefineHist

Residual factor R for reflections that satisfy the resolution limits established by _refine_hist.d_res_high and _refine_hist.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getRFactorRWork() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Residual factor R for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getRfree_Rwork() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The difference between reported Rfree and reported Rwork.

getRFreeDetails() - Method in class org.rcsb.cif.schema.mm.Reflns

A description of the method by which a subset of reflections was selected for exclusion from refinement so as to be used in the calculation of a 'free' R factor.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor R(Fsqd), calculated on the squared amplitudes of the measured and calculated structure factors, for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.core.RefineLs

Residual factor R(Fsqd), calculated on the squared amplitudes of the measured and calculated structure factors, for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Residual factor R(F^2^) for reflections in this class judged significantly intense (see _reflns.threshold_expression) and included in refinement.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Residual factor R(F^2^) for reflections in this class judged significantly intense (i.e.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the residual factor R(F^2^) calculated on the squared amplitudes of the observed and calculated structure factors, for the reflections judged significantly intense (i.e.

getRFsqdFactor() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the residual factor R(F^2^) calculated on the squared amplitudes of the observed and calculated structure factors for the reflections judged significantly intense (i.e.

getRGB() - Method in class org.rcsb.cif.schema.core.DisplayColour

The red-green-blue intensities, bases 256, for each colour code.

getRGDResHigh() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of the high-resolution cutoff in angstroms used in the calculation of the Hamilton generalized R factor (RG) stored in _refine_analyze.RG_work and _refine_analyze.RG_free.

getRGDResLow() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The value of the low-resolution cutoff in angstroms used in the calculation of the Hamilton generalized R factor (RG) stored in _refine_analyze.RG_work and _refine_analyze.RG_free.

getRGFree() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The Hamilton generalized R factor for all reflections that satisfy the resolution limits established by _refine_analyze.RG_d_res_high and _refine_analyze.RG_d_res_low for the free R set of reflections that were excluded from the refinement.

getRGFreeWorkRatio() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The observed ratio of RGfree to RGwork.

getRGWork() - Method in class org.rcsb.cif.schema.mm.RefineAnalyze

The Hamilton generalized R factor for all reflections that satisfy the resolution limits established by _refine_analyze.RG_d_res_high and _refine_analyze.RG_d_res_low and for those reflections included in the working set when a free R set of reflections is omitted from the refinement.

getRIFactor() - Method in class org.rcsb.cif.schema.core.Refine

Residual factor R(I) for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getRIFactor() - Method in class org.rcsb.cif.schema.core.RefineLs

Residual factor R(I) for significantly intense reflections (satisfying _reflns.threshold_expression) and included in the refinement.

getRIFactor() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Residual factor R(I) for reflections in this class judged significantly intense (see _reflns.threshold_expression) and included in refinement.

getRIFactor() - Method in class org.rcsb.cif.schema.core.ReflnsClass

Residual factor R(I) for reflections in this class judged significantly intense (i.e.

getRIFactor() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the residual factor R(I) for the reflections judged significantly intense (i.e.

getRIFactor() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the residual factor R(I) for the reflections judged significantly intense (i.e.

getRise() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step rise parameter.

getRisePerNSubunits() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Angular rotation (degrees) in N subunits

getRisePerNSubunits() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Angular rotation (degrees) in N subunits

getRKraut() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.R_kraut records R_kraut for MAD phasing.

getRKraut() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_kraut records R_kraut for MAD phasing.

getRKraut() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.R_kraut records R_kraut for MAD phasing.

getRKraut() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerShell

Residual factor R~kraut~ for general reflections for this derivative in this shell.

getRKraut() - Method in class org.rcsb.cif.schema.mm.PhasingMIRShell

Residual factor R~kraut~ for general reflections in this shell.

getRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.r_kraut_acentric records r_kraut using acentric data for MAD phasing.

getRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_kraut_acentric records R_kraut using acentric data for MAD phasing.

getRKrautAcentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.r_kraut_acentric records R_kraut using acentric data for MAD phasing.

getRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

_pdbx_phasing_MAD_set.R_kraut_centric records r_kraut using centric data for MAD phasing.

getRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

_pdbx_phasing_MAD_set_shell.R_kraut_centric records R_kraut using centric data for MAD phasing.

getRKrautCentric() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

_pdbx_phasing_MAD_shell.R_kraut_centric records R_kraut using centric data for MAD phasing.

getRMerge() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Rmerge value (percent)

getRmergeFAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(F) for all reflections in a given shell.

getRmergeFAll() - Method in class org.rcsb.cif.schema.mm.Reflns

Residual factor Rmerge for all reflections that satisfy the resolution limits established by _reflns.d_resolution_high and _reflns.d_resolution_low.

getRmergeFAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

Residual factor Rmerge for all reflections that satisfy the resolution limits established by _reflns_shell.d_res_high and _reflns_shell.d_res_low.

getRmergeFGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(F) for reflections in a shell which are significantly intense (see _reflns.threshold_expression).

getRmergeFGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The value of Rmerge(F) for significantly intense reflections (see _reflns.threshold_expression) in a given shell.

getRmergeFObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(F) for reflections in a shell which are significantly intense (see _reflns.threshold_expression).

getRmergeFObs() - Method in class org.rcsb.cif.schema.mm.Reflns

Residual factor Rmerge for reflections that satisfy the resolution limits established by _reflns.d_resolution_high and _reflns.d_resolution_low and the observation limit established by _reflns.observed_criterion.

getRmergeFObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

Residual factor Rmerge for reflections that satisfy the resolution limits established by _reflns_shell.d_res_high and _reflns_shell.d_res_low and the observation criterion established by _reflns.observed_criterion.

getRmergeIAll() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(I) for all reflections in a given shell.

getRmergeIAll() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The value of Rmerge(I) for all reflections in a given shell.

getRmergeIGt() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(I) for reflections in a shell which are significantly intense (see _reflns.threshold_expression).

getRmergeIGt() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The value of Rmerge(I) for significantly intense reflections (see _reflns.threshold_expression) in a given shell.

getRmergeIObs() - Method in class org.rcsb.cif.schema.core.ReflnsShell

Rmerge(I) for reflections in a shell which are significantly intense (see _reflns.threshold_expression).

getRmergeIObs() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The R factor for the reflections that satisfy the merging criteria for the resolution shell.

getRmergeIObs() - Method in class org.rcsb.cif.schema.mm.ReflnsShell

The value of Rmerge(I) for reflections classified as 'observed' (see _reflns.observed_criterion) in a given shell.

getRmsAngles() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all angles in entry relative to small molecule crystal standards.

getRmsAngles() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

RMS deviation for all angles in this monomer relative to small molecule crystal standards.

getRmsAnglesBase() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all base angles in entry relative to small molecule crystal standards.

getRmsAnglesPhosphate() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all phosphate angles in entry relative to small molecule crystal standards.

getRmsAnglesSugar() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all sugar angles in entry relative to small molecule crystal standards.

getRmsBonds() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all bonds in entry relative to small molecule crystal standards.

getRmsBonds() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

RMS deviation for all bonds in this monomer relative to small molecule crystal standards.

getRmsBondsBase() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all base bonds in entry relative to small molecule crystal standards.

getRmsBondsPhosphate() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all phosphate bonds in entry relative to small molecule crystal standards.

getRmsBondsSugar() - Method in class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

Total RMS deviation for all sugar bonds in entry relative to small molecule crystal standards.

getRmsd() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

The value of the overall deviation from ideal plane for the atoms defining the plane.

getRmsDev() - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

The root-mean-square deviation in restraints for the domain specified by _pdbx_refine_ls_restr_ncs.dom_id and in the domains against which it was restrained.

getRmsDevBIso() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

The root-mean-square deviation in equivalent isotropic displacement parameters in the domain specified by _refine_ls_restr_ncs.dom_id and in the domains against which it was restrained.

getRmsDevPosition() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

The root-mean-square deviation in equivalent atom positions in the domain specified by _refine_ls_restr_ncs.dom_id and in the domains against which it was restrained.

getRmsf() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The Root Mean Square Fluctuation (RMSF) observed in the primitive sphere object at this position.

getRNormalAll() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

Definition...

getRNormalAnomScat() - Method in class org.rcsb.cif.schema.mm.PhasingMADExpt

Definition...

getRo() - Method in class org.rcsb.cif.schema.core.ValenceParam

The bond valence parameter Ro used in the expression s = exp[(Ro - R)/B] where s is the valence of bond length R.

getRo() - Method in class org.rcsb.cif.schema.mm.ValenceParam

The bond-valence parameter Ro used in the expression s = exp[(Ro - R)/B] where s is the valence of a bond of length R.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

In cases where the sequence has been determined by a robot this data item provides a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category for the robot responsible

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRobotId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.

getRole() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The role of this author in the project depositing this data.

getRoll() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step roll parameter.

getRotamerOutliersNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Number of rotamer outliers.

getRotamerOutliersPercent() - Method in class org.rcsb.cif.schema.mm.PdbxDccGeometry

Percentage of rotamer outliers.

getRotationPerNSubunits() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

Angular rotation (degrees) in N subunits

getRotationPerNSubunits() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

Angular rotation (degrees) in N subunits

getRotMatrix11() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix11() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix11() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix11() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix11() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix12() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix12() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix12() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix12() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix12() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix13() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix13() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix13() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix13() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix13() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix21() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix21() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix21() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix21() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix21() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix22() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix22() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix22() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix22() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix22() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix23() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix23() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix23() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix23() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix23() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix31() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix31() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix31() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix31() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix31() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix32() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix32() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix32() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix32() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix32() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.

getRotMatrix33() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the rotation matrix used in the fitting of the model to the image.

getRotMatrix33() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix33() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the rotation matrix used in the transformation.

getRotMatrix33() - Method in class org.rcsb.cif.schema.mm.StructBiolView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_BIOL_GEN category to give a view useful for describing the structure.

getRotMatrix33() - Method in class org.rcsb.cif.schema.mm.StructSiteView

The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category an orientation useful for visualizing the site.

getRowCount() - Method in class org.rcsb.cif.model.binary.BinaryCategory

getRowCount() - Method in class org.rcsb.cif.model.binary.BinaryColumn

getRowCount() - Method in class org.rcsb.cif.model.Category.EmptyCategory

getRowCount() - Method in interface org.rcsb.cif.model.Category

The number of rows in this Category.

getRowCount() - Method in class org.rcsb.cif.model.Column.EmptyColumn

getRowCount() - Method in interface org.rcsb.cif.model.Column

The number of rows in this Column.

getRowCount() - Method in class org.rcsb.cif.model.text.TextCategory

getRowCount() - Method in class org.rcsb.cif.model.text.TextColumn

getRowCount() - Method in class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

getRowCount() - Method in class org.rcsb.cif.schema.DelegatingCategory

getRowCount() - Method in class org.rcsb.cif.schema.DelegatingColumn

getRRigidBody() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.R_rigid_body identifies the R factor for rigid body refinement after rotation and translation.(In general, rigid body refinement has to be carried out after molecular replacement.

getRSCC() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real Space electron density Correlation Coefficient for the residue.

getRSCC() - Method in class org.rcsb.cif.schema.mm.StructMonDetails

This data item describes the specifics of the calculations that generated the values given in _struct_mon_prot.RSCC_all, _struct_mon_prot.RSCC_main and _struct_mon_prot.RSCC_side.

getRSCCAll() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCAll() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCBase() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCMain() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real Space electron density Correlation Coefficient for the main chain atoms.

getRSCCPhos() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real Space electron density Correlation Coefficient for the phosphate atoms.

getRSCCSide() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSCCSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real Space electron density Correlation Coefficient for the side chain atoms.

getRSCCSugar() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space (linear) correlation coefficient RSCC, as described by Jones et al.

getRSR() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real space Rfactor (RSR) for the residue.

getRSR() - Method in class org.rcsb.cif.schema.mm.StructMonDetails

This data item describes the specifics of the calculations that generated the values given in _struct_mon_prot.RSR_all, _struct_mon_prot.RSR_main and _struct_mon_prot.RSR_side.

getRSRAll() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the nucleic acid monomer.

getRSRAll() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the monomer.

getRSRBase() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the base moiety of the nucleic acid monomer.

getRSRMain() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the main chain of the monomer.

getRSRMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real space Rfactor (RSR) for the main chain atoms.

getRSRPhos() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the phosphate moiety of the nucleic acid monomer.

getRSRPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real space Rfactor (RSR) for the phosphate atoms.

getRSRSide() - Method in class org.rcsb.cif.schema.mm.StructMonProt

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the side chain of the monomer.

getRSRSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Real space Rfactor (RSR) for the side chain atoms.

getRSRSugar() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The real-space residual RSR, as described by Branden & Jones (1990), evaluated over all atoms in the sugar moiety of the nucleic acid monomer.

getRSRZ() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of the Real Space Rfactor (RSRZ) for the residue.

getRSRZMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of the Real Space Rfactor (RSRZ) for the main chain atoms.

getRSRZPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of the Real Space Rfactor (RSRZ) for the phosphate atoms.

getRSRZSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of the Real Space Rfactor (RSRZ) for the side chain atoms.

getRSym() - Method in class org.rcsb.cif.schema.mm.EmDiffractionStats

Rsym value (percent)

getRsymValue() - Method in class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

The R factor for averaging the symmetry related reflections for the resolution shell.

getRSZD() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The real space difference density Z score (defined as Delta_rho/sigma(Delta_rho)) from Tickle (2012).

getRSZDMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZD, use for the main chain atoms.

getRSZDPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZD, use for the phosphate atoms of nucleic acids.

getRSZDSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZD, use for the side chain atoms.

getRSZO() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The real space observed density Z score (defined as <rho_obs>/sigma(Delta_rho)) from Tickle (2012).

getRSZOMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZO, use for the main chain atoms.

getRSZOPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZO, use for the phosphate atoms of nucleic acids.

getRSZOSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.RSZO, use for the side chain atoms.

getRSZOZscore() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The Zscore of RSZO (or the Zscore of <rho_obs>/sigma(Delta_rho)).

getRT() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

The TRANSPOSE of the symmetry rotation matrix representing the point group opertions of the space group | r11 r21 r31 | RT = | r12 r22 r32 | | r13 r23 r33 |

getRValueRFree() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The Rfree reported in the model file.

getRValueRWork() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The Rwork reported in the model file.

getS11() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS11Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS12() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS12Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS13() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS13Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS21() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS21Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS22() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS22Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS23() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS23Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS31() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS31Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS32() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS32Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getS33() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the screw-rotation tensor S.

getS33Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.S.

getSameAuthorsAsPdb() - Method in class org.rcsb.cif.schema.mm.EmDepui

Indicates whether the authors for the EMDB entry are the same as for the PDB entry in a joint map + model deposition

getSameTitleAsPdb() - Method in class org.rcsb.cif.schema.mm.EmDepui

Indicates whether the title for the EMDB entry is the same as for the PDB entry in a joint map + model deposition

getSampleConcentration() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

The value of the concentration (mg per milliliter) of the complex in the sample.

getSampleConcentration() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The concentration of the protein solution put onto the column.

getSampleConcMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The method used to determine the concentration of the protein solution put onto the column.

getSampleDehydrationPrevention() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Method to prevent dehydration of sample

getSampleHolding() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

For a fixed target sample, mechanism to hold sample in the beam

getSamplePH() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The pH value of the buffered sample.

getSamplePreparationId() - Method in class org.rcsb.cif.schema.mm.EmVitrification

This data item is a pointer to _em_sample_preparation.id in the EM_SAMPLE_PREPARATION category.

getSamplePrepDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

Details of the sample preparation prior to running the column.

getSampleSolvent() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

The sample solution content and concentration

getSampleState() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

Physical state of the sample either anisotropic or isotropic.

getSampleState() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

Physical state of the sample either anisotropic or isotropic.

getSampleSupportId() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

Pointer to EM SAMPLE SUPPORT

getSampleSupportId() - Method in class org.rcsb.cif.schema.mm.EmImaging

This data item is a pointer to _em_sample_support.id in the EM_SAMPLE_SUPPORT category.

getSampleSupportId() - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

Pointer to EM SAMPLE SUPPORT

getSampleUnitSize() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Size of pore in grid supporting sample.

getSampleVolume() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The volume of protein solution run on the column.

getSampleXyzSequenceAlignmentsValid() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

A flag to indicate that sample and coordinate sequence alignments is valid for this entity

getSampleXyzSequenceAlignmentsValid() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate that all sample coordinate sequence alignments are valid.

getSamplingSize() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The sampling step size (microns) set on the scanner.

getSaveFrames() - Method in class org.rcsb.cif.model.binary.BinaryBlock

getSaveFrames() - Method in interface org.rcsb.cif.model.Block

All save frames associated to this Block.

getSaveFrames() - Method in class org.rcsb.cif.model.text.TextBlock

getSaveFrames() - Method in class org.rcsb.cif.schema.DelegatingBlock

getScale() - Method in class org.rcsb.cif.schema.core.DiffrnAttenuator

The scale factor applied to a measured intensity if it is reduced by an attenuator identified by _diffrn_attenuator.code.

getScale() - Method in class org.rcsb.cif.schema.mm.DiffrnAttenuator

The scale factor applied when an intensity measurement is reduced by an attenuator identified by _diffrn_attenuator.code.

getScale11() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale12() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale13() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale21() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale22() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale23() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale31() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale32() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScale33() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE matrix.

getScaleGroupCode() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying the scale applying to this reflection.

getScaleGroupCode() - Method in class org.rcsb.cif.schema.core.Refln

Code identifying the scale (if there is more than one scale) used convert the measured structure factor to a common absolute value.

getScaleGroupCode() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying the scale applying to this reflection.

getScaleGroupCode() - Method in class org.rcsb.cif.schema.mm.Refln

This data item is a pointer to _reflns_scale.group_code in the REFLNS_SCALE category.

getScaleSigma() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

The average standard uncertainty of the individual standard scales applied to the intensity data.

getScaleSigma() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

The average standard uncertainty of the individual standard scales applied to the intensity data.

getScaleSigma() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The standard uncertainty (estimated standard deviation) of the individual mean standard scales applied to the intensity data.

getScaleSuAverage() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

The average standard uncertainty of the individual standard scales applied to the intensity data.

getScaleU() - Method in class org.rcsb.cif.schema.core.DiffrnStandard

The average standard uncertainty of the individual standard scales applied to the intensity data.

getScaleU() - Method in class org.rcsb.cif.schema.core.DiffrnStandards

The average standard uncertainty of the individual standard scales applied to the intensity data.

getScaleU() - Method in class org.rcsb.cif.schema.mm.DiffrnStandards

The standard uncertainty of the individual mean standard scales applied to the intensity data.

getScaleVector1() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE vector.

getScaleVector2() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE vector.

getScaleVector3() - Method in class org.rcsb.cif.schema.mm.DatabasePDBMatrix

The elements of the PDB SCALE vector.

getScaleY() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The value applied to the Y direction.

getScanMode() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying the mode of scanning with a diffractometer.

getScanMode() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying the mode of scanning for measurements using a diffractometer.

getScanModeBackgd() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying mode of scanning to measure the background intensity.

getScanModeBackgd() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying the mode of scanning a reflection to measure the background intensity.

getScannerModel() - Method in class org.rcsb.cif.schema.mm.EmImageScans

The scanner model.

getScanRate() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Angular rate of scanning a reflection to measure the intensity.

getScanRate() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The rate of scanning a reflection in degrees per minute to measure the intensity.

getScansId() - Method in class org.rcsb.cif.schema.mm.EmImaging

The value of _em_imaging.scans_id must uniquely identify the image_scans used in the experiment.

getScanTimeBackgd() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Time spent measuring background counts.

getScanTimeBackgd() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The time spent measuring each background in seconds.

getScanWidth() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Angular scan width when measuring the peak intensity.

getScanWidth() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The scan width in degrees of the scan mode defined by the code _diffrn_refln.scan_mode.

getScatCromerMannA1() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannA1() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient a1 used to calculate the scattering factors for this atom type.

getScatCromerMannA2() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannA2() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient a2 used to calculate the scattering factors for this atom type.

getScatCromerMannA3() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannA3() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient a3 used to calculate the scattering factors for this atom type.

getScatCromerMannA4() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannA4() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient a4 used to calculate the scattering factors for this atom type.

getScatCromerMannB1() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannB1() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient b1 used to calculate the scattering factors for this atom type.

getScatCromerMannB2() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannB2() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient b2 used to calculate the scattering factors for this atom type.

getScatCromerMannB3() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannB3() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient b3 used to calculate the scattering factors for this atom type.

getScatCromerMannB4() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannB4() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient b4 used to calculate the scattering factors for this atom type.

getScatCromerMannC() - Method in class org.rcsb.cif.schema.core.AtomType

The set of data items used to define Cromer-Mann coefficients for generation of X-ray scattering factors.

getScatCromerMannC() - Method in class org.rcsb.cif.schema.mm.AtomType

The Cromer-Mann scattering-factor coefficient c used to calculate the scattering factors for this atom type.

getScatDispersionImag() - Method in class org.rcsb.cif.schema.core.AtomType

The imaginary component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getScatDispersionImag() - Method in class org.rcsb.cif.schema.mm.AtomType

The imaginary component of the anomalous-dispersion scattering factor, f'', in electrons for this atom type and the radiation identified by _diffrn_radiation_wavelength.id.

getScatDispersionReal() - Method in class org.rcsb.cif.schema.core.AtomType

The real component of the anomalous dispersion scattering factors for this atom type and radiation by _diffrn_radiation_wavelength.value

getScatDispersionReal() - Method in class org.rcsb.cif.schema.mm.AtomType

The real component of the anomalous-dispersion scattering factor, f', in electrons for this atom type and the radiation identified by _diffrn_radiation_wavelength.id.

getScatDispersionSource() - Method in class org.rcsb.cif.schema.core.AtomType

Reference to source of real and imaginary dispersion corrections for scattering factors used for this atom type.

getScatDispersionSource() - Method in class org.rcsb.cif.schema.mm.AtomType

Reference to the source of the real and imaginary dispersion corrections for scattering factors used for this atom type.

getScatLengthNeutron() - Method in class org.rcsb.cif.schema.core.AtomType

The bound coherent scattering length for the atom type at the isotopic composition used for the diffraction experiment.

getScatLengthNeutron() - Method in class org.rcsb.cif.schema.mm.AtomType

The bound coherent scattering length in femtometres for the atom type at the isotopic composition used for the diffraction experiment.

getScatSource() - Method in class org.rcsb.cif.schema.core.AtomType

Reference to source of scattering factors used for this atom type.

getScatSource() - Method in class org.rcsb.cif.schema.mm.AtomType

Reference to the source of the scattering factors or scattering lengths used for this atom type.

getScatterId() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

This data item is a pointer to _pdbx_soln_scatter.id in the PDBX_SOLN_SCATTER category.

getScatVersusStolList() - Method in class org.rcsb.cif.schema.core.AtomType

List of scattering factors as a function of sin theta on lambda.

getScatVersusStolList() - Method in class org.rcsb.cif.schema.mm.AtomType

A table of scattering factors as a function of sin theta over lambda.

getSchema() - Method in class org.rcsb.cif.schema.core.Audit

This dataname identifies the type of information contained in the datablock.

getSchoenfliesSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetry

The Schoenflies point symmetry symbol.

getSchoenfliesSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

The Schoenflies point symmetry symbol.

getScriptFileId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The file id corresponding to the script used in the post processing step.

getScriptFileId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

The file id corresponding to the script used in the modeling protocol step.

getScriptFileId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComputationalModels

The file id corresponding to the script used in the computational modeling.

getSection() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectHalfTorus

The section of the torus representing the half-torus.

getSectionAbstract() - Method in class org.rcsb.cif.schema.core.Publ

The abstract of the submitted paper.

getSectionAbstract() - Method in class org.rcsb.cif.schema.mm.Publ

The abstract section of a manuscript if the manuscript is submitted in parts.

getSectionAcknowledgements() - Method in class org.rcsb.cif.schema.core.Publ

The acknowledgements section of the submitted paper.

getSectionAcknowledgements() - Method in class org.rcsb.cif.schema.mm.Publ

The acknowledgements section of a manuscript if the manuscript is submitted in parts.

getSectionComment() - Method in class org.rcsb.cif.schema.core.Publ

The comment section of the submitted paper.

getSectionComment() - Method in class org.rcsb.cif.schema.mm.Publ

The comment section of a manuscript if the manuscript is submitted in parts.

getSectionDiscussion() - Method in class org.rcsb.cif.schema.core.Publ

The discussion section of the submitted paper.

getSectionDiscussion() - Method in class org.rcsb.cif.schema.mm.Publ

The discussion section of a manuscript if the manuscript is submitted in parts.

getSectionExperimental() - Method in class org.rcsb.cif.schema.core.Publ

The experimental section of the submitted paper.

getSectionExperimental() - Method in class org.rcsb.cif.schema.mm.Publ

The experimental section of a manuscript if the manuscript is submitted in parts.

getSectionExptlPrep() - Method in class org.rcsb.cif.schema.core.Publ

The experimental preparation section of the submitted paper.

getSectionExptlPrep() - Method in class org.rcsb.cif.schema.mm.Publ

The experimental preparation section of a manuscript if the manuscript is submitted in parts.

getSectionExptlRefinement() - Method in class org.rcsb.cif.schema.core.Publ

The experimental refinement section of the submitted paper.

getSectionExptlRefinement() - Method in class org.rcsb.cif.schema.mm.Publ

The experimental refinement section of a manuscript if the manuscript is submitted in parts.

getSectionExptlSolution() - Method in class org.rcsb.cif.schema.core.Publ

The experimental solution section of the submitted paper.

getSectionExptlSolution() - Method in class org.rcsb.cif.schema.mm.Publ

The experimental solution section of a manuscript if the manuscript is submitted in parts.

getSectionFigureCaptions() - Method in class org.rcsb.cif.schema.core.Publ

The figure captions of the submitted paper.

getSectionFigureCaptions() - Method in class org.rcsb.cif.schema.mm.Publ

The figure captions section of a manuscript if the manuscript is submitted in parts.

getSectioning() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

The type of sectioning performed during specimen preparation.

getSectionIntroduction() - Method in class org.rcsb.cif.schema.core.Publ

The introduction section of the submitted paper.

getSectionIntroduction() - Method in class org.rcsb.cif.schema.mm.Publ

The introduction section of a manuscript if the manuscript is submitted in parts.

getSectionKeywords() - Method in class org.rcsb.cif.schema.core.Publ

The keywords of the submitted paper.

getSectionReferences() - Method in class org.rcsb.cif.schema.core.Publ

The references section of the submitted paper.

getSectionReferences() - Method in class org.rcsb.cif.schema.mm.Publ

The references section of a manuscript if the manuscript is submitted in parts.

getSectionRelatedLiterature() - Method in class org.rcsb.cif.schema.core.Publ

The related literature section of the submitted paper.

getSectionSynopsis() - Method in class org.rcsb.cif.schema.core.Publ

The synopsis of the submitted paper.

getSectionSynopsis() - Method in class org.rcsb.cif.schema.mm.Publ

The synopsis section of a manuscript if the manuscript is submitted in parts.

getSectionTableLegends() - Method in class org.rcsb.cif.schema.core.Publ

The table legends of the submitted paper.

getSectionTableLegends() - Method in class org.rcsb.cif.schema.mm.Publ

The table legends section of a manuscript if the manuscript is submitted in parts.

getSectionTitle() - Method in class org.rcsb.cif.schema.core.Publ

The full title of the submitted paper.

getSectionTitle() - Method in class org.rcsb.cif.schema.mm.Publ

The title of a manuscript if the manuscript is submitted in parts.

getSectionTitleFootnote() - Method in class org.rcsb.cif.schema.core.Publ

Footnote (if any) to the title of the submitted paper.

getSectionTitleFootnote() - Method in class org.rcsb.cif.schema.mm.Publ

The footnote to the title of a manuscript if the manuscript is submitted in parts.

getSeeding() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

A description of the protocol used for seeding the crystal growth.

getSeedingRef() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

A literature reference that describes the protocol used to seed the crystal.

getSeitzFromJones() - Method in class org.rcsb.cif.schema.core.Function

The function s = SeitzFromJones( j ) returns a 4x4 Seitz matrix from the Jones faithful representation of the equivalent position which is a character string e.g.

getSeitzMatrix() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

A matrix containing the symmetry operations of a space group in 4x4 Seitz format.

getSelection() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A qualification of the subset of atoms in the specified range included in the TLS fragment.

getSelection() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

A qualification of the subset of atoms in the group.

getSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentative

The selection criteria based on which the representative is chosen.

getSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRepresentative

By highlighting the appropriate choice(s), describe the criteria used to select this structure as a representative structure, or if an average structure has been calculated describe how this was done.

getSelectionDetails() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

A text description of subset of atoms included included in the TLS fragment.

getSelectionDetails() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

A text description of subset of the atom selection in the group.

getSelectionDetails() - Method in class org.rcsb.cif.schema.mm.StructNcsDomLim

A text description of the selection of residues that correspond to this domain.

getSender() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The name of the sender.

getSender() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

A the message creator.

getSenderAddressEmail() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The email address of the sender.

getSenderAddressFax() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The FAX phone number of the sender.

getSenderAddressMail() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The postal address of the sender.

getSenderAddressPhone() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

The phone number of the sender.

getSendStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

The message status.

getSense() - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

A flag to indicate whether the two designated residue ranges are parallel or antiparallel to one another.

getSense() - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

A flag to indicate whether the two designated residue ranges are parallel or antiparallel to one another.

getSeq() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

sequence expressed as string of one-letter base codes or one letter amino acid codes.

getSeq() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySubcomponents

The subcomponent sequence for the entity.

getSeqAlign() - Method in class org.rcsb.cif.schema.mm.StructRef

A flag to indicate the scope of the alignment between the sequence of the entity or biological unit described in the data block and that in the referenced database entry.

getSeqAlignBeg() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The sequence position in the entity or biological unit described in the data block at which the alignment begins.

getSeqAlignBegin() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

Beginning index in the author provided chemical sequence.

getSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

Ending index in the author provided chemical sequence.

getSeqAlignEnd() - Method in class org.rcsb.cif.schema.mm.StructRefSeq

The sequence position in the entity or biological unit described in the data block at which the alignment ends.

getSeqDetails() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessDetails

Details concerning the standardization of the chemical sequence data in this entry.

getSeqDif() - Method in class org.rcsb.cif.schema.mm.StructRef

A flag to indicate the presence ('yes') or absence ('no') of point differences between the sequence of the entity or biological unit described in the data block and that in the referenced database entry.

getSeqId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

The sequence index for the residue.

getSeqId() - Method in class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

The sequence index of the residue to which the atom belongs.

getSeqId() - Method in class org.rcsb.cif.schema.mm.IhmPolyProbePosition

The sequence index of the residue in the entity where the probe is attached.

getSeqId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The sequence index corresponding this to coordinate position.

getSeqId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

The residue index.

getSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

Pointer to _entity_poly_seq.num

getSeqId() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

Part of the author identifier of the inserted residue.

getSeqId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The sequence index for the first monomer partner in the cross link.

getSeqId1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The sequence index for the first monomer partner in the cross link.

getSeqId1() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The sequence index for the first monomer partner in the predicted contact.

getSeqId1() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The positional index for the first atom in the interaction.

getSeqId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkList

The sequence index for the second monomer partner in the cross link.

getSeqId2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The sequence index for the second monomer partner in the cross link.

getSeqId2() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

The sequence index for the second monomer partner in the predicted contact.

getSeqId2() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The positional index for the first atom in the interaction.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

The leading residue index for the polymeric segment.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The leading sequence index corresponding to this gaussian object.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The leading sequence index corresponding to this gaussian object.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The sequence index of the beginning residue / residue range.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

The starting residue index for the sequence segment of missing residues.

getSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The leading sequence index corresponding to this sphere object.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmEntityPolySegment

The trailing residue index for the polymeric segment.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The trailing sequence index corresponding to this gaussian object.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The trailing sequence index corresponding to this gaussian object.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

The sequence index of the ending residue / residue range.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

The ending residue index for the sequence segment of missing residues.

getSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmSphereObjSite

The trailing sequence index corresponding to this sphere object.

getSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

Position in the sequence.

getSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

Position in the sequence.

getSeqNum() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

Position in the sequence.

getSeqNum() - Method in class org.rcsb.cif.schema.mm.StructRefSeqDif

This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.

getSeqOneLetterCode() - Method in class org.rcsb.cif.schema.mm.PdbxPrereleaseSeq

Chemical sequence expressed as string of one-letter amino acid codes.

getSeqRangeId() - Method in class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

The value of _pdbx_feature_sequence_range.seq_range_id references a sequence_range definition in category PDBX_SEQUENCE_RANGE.

getSeqRangeId() - Method in class org.rcsb.cif.schema.mm.PdbxSequenceRange

This data item is an identifier for a sequence range.

getSeqType() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

This data item povides additional information about the sequence type.

getSequenceAlign() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

Some text data item related sequene alignment.

getSequenceDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

Additional details about the sequence or sequence database correspondences for this entry.

getSequencePattern() - Method in class org.rcsb.cif.schema.mm.PdbxSequencePattern

Sequence singlet or doublet.

getSerial() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

This items uniquely defines a timepoint within a series.

getSerialNo() - Method in class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

Serial number.

getSerialNo() - Method in class org.rcsb.cif.schema.mm.PdbxXplorFile

Serial number.

getSetId() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

record the phasing set.

getSetId() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

This data item is a pointer to _phasing_set.id in the PHASING_SET category.

getSetId() - Method in class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

This data item is a pointer to _phasing_set.id in the PHASING_SET category.

getSetId() - Method in class org.rcsb.cif.schema.mm.PhasingSetRefln

This data item is a pointer to _phasing_set.id in the PHASING_SET category.

getSGEntry() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether the entry belongs to Structural Genomics Project.

getSgId() - Method in class org.rcsb.cif.schema.mm.SpaceGroupSymop

This must match a particular value of _space_group.id, allowing the symmetry operation to be identified with a particular space group.

getShadowingApplied() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

'YES' indicates that the specimen has been shadowed.

getShear() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair shear parameter.

getSheetId() - Method in class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.

getSheetId() - Method in class org.rcsb.cif.schema.mm.StructSheetHbond

This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.

getSheetId() - Method in class org.rcsb.cif.schema.mm.StructSheetOrder

This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.

getSheetId() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.

getSheetId() - Method in class org.rcsb.cif.schema.mm.StructSheetTopology

This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.

getShift() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step shift parameter.

getShift() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Defined in sfcheck (displacement/sigma_of_displacement).

getShift() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The tendency of the group of atoms (e.g.

getShiftMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.density_shift, but it is for main chain.

getShiftMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The tendency of the group of atoms (e.g.

getShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.Refine

The largest ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getShiftOverSuMax() - Method in class org.rcsb.cif.schema.core.RefineLs

The largest ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.Refine

Upper limit for the largest ratio of the final l-s parameter shift divided by the final standard uncertainty.

getShiftOverSuMaxLt() - Method in class org.rcsb.cif.schema.core.RefineLs

Upper limit for the largest ratio of the final l-s parameter shift divided by the final standard uncertainty.

getShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.Refine

The average ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getShiftOverSuMean() - Method in class org.rcsb.cif.schema.core.RefineLs

The average ratio of the final least-squares parameter shift to the final standard uncertainty (s.u., formerly described as estimated standard deviation, e.s.d.).

getShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.Refine

Upper limit for the average ratio of the final l-s parameter shift divided by the final standard uncertainty.

getShiftOverSuMeanLt() - Method in class org.rcsb.cif.schema.core.RefineLs

Upper limit for the average ratio of the final l-s parameter shift divided by the final standard uncertainty.

getShiftSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The same as _pdbx_dcc_map.density_shift, but it is for side chain.

getShiftSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxRefineComponent

The tendency of the group of atoms (e.g.

getSigma1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The uncertainty in the position of residue 1 in the crosslink arising due to the multi-scale nature of the model represention.

getSigma1() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

The uncertainty in the position of residue 1 in the crosslink arising due to the multi-scale nature of the model represention.

getSigma2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

The uncertainty in the position of residue 2 in the crosslink arising due to the multi-scale nature of the model represention.

getSigma2() - Method in class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

The uncertainty in the position of residue 2 in the crosslink arising due to the multi-scale nature of the model represention.

getSigmaFRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.sigma_F_rotation identifies the sigma cut off of structure factor used for rotation search.

getSigmaFTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.sigma_F_translation identifies the sigma cut off of structure factor used for translation search.

getSigmaI() - Method in class org.rcsb.cif.schema.mm.ReflnSysAbs

The standard uncertainty (estimated standard deviation) of _refln_sys_abs.I in arbitrary units.

getSigmaIRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.sigma_I_rotation identifies the sigma cut off of intensity used for rotation search.

getSigmaITranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

The value of _pdbx_phasing_MR.sigma_I_translation identifies the sigma cut off of intensity used for translation search.

getSinThetaOverLambda() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

(sin theta)/lambda value for this reflection.

getSinThetaOverLambda() - Method in class org.rcsb.cif.schema.core.Refln

The (sin theta)/lambda value for this reflection.

getSintOverLambda() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

(sin theta)/lambda value for this reflection.

getSintOverLambda() - Method in class org.rcsb.cif.schema.core.Refln

The (sin theta)/lambda value for this reflection.

getSintOverLambda() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The (sin theta)/lambda value in reciprocal angstroms for this reflection.

getSintOverLambda() - Method in class org.rcsb.cif.schema.mm.Refln

The (sin theta)/lambda value in reciprocal angstroms for this reflection.

getSiteId() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

This data item is a pointer to _struct_site.id in the STRUCT_SITE category.

getSiteId() - Method in class org.rcsb.cif.schema.mm.StructSiteKeywords

This data item is a pointer to _struct_site.id in the STRUCT_SITE category.

getSiteId() - Method in class org.rcsb.cif.schema.mm.StructSiteView

This data item is a pointer to _struct_site.id in the STRUCT_SITE category.

getSiteSymmetry() - Method in class org.rcsb.cif.schema.core.SpaceGroupWyckoff

The subgroup of the space group that leaves the point fixed.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.GeomAngle

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.GeomBond

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.GeomContact

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.core.GeomTorsion

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The symmetry code of the first of the three atom sites that define the angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.GeomBond

The symmetry code of the first of the two atom sites that define the bond.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.GeomContact

The symmetry code of the first of the two atom sites that define the contact.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The symmetry code of the first of the four atom sites that define the torsion angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

The symmetry of the first of the two atoms define the close contact.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

The symmetry operation applied to the first of the two atoms defining the close contact.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The symmetry code of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The symmetry code of the first of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getSiteSymmetry1() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The symmetry code of the first of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.GeomAngle

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.GeomBond

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.GeomContact

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.core.GeomTorsion

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The symmetry code of the second of the three atom sites that define the angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.GeomBond

The symmetry code of the second of the two atom sites that define the bond.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.GeomContact

The symmetry code of the second of the two atom sites that define the contact.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The symmetry code of the second of the four atom sites that define the torsion angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

The symmetry of the second of the two atoms define the close contact.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.PdbxValSymContact

The symmetry operation applied to the second of the two atoms defining the close contact.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The symmetry code of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualBond

The symmetry code of the second of the two atom sites that define the bond specified by _pdbx_virtual_bond.dist.

getSiteSymmetry2() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The symmetry code of the second of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.core.GeomAngle

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.core.GeomTorsion

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The symmetry code of the third of the three atom sites that define the angle.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The symmetry code of the third of the four atom sites that define the torsion angle.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The symmetry code of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.

getSiteSymmetry3() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The symmetry code of the third of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getSiteSymmetry4() - Method in class org.rcsb.cif.schema.core.GeomTorsion

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetry4() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The symmetry code of the fourth of the four atom sites that define the torsion angle.

getSiteSymmetry4() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The symmetry code of the fourth of the four atom sites that define the torsion angle specified by _pdbx_virtual_torsion.value.

getSiteSymmetryA() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetryA() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The symmetry code of the acceptor-atom site that defines the hydrogen bond.

getSiteSymmetryD() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetryD() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The symmetry code of the donor-atom site that defines the hydrogen bond.

getSiteSymmetryH() - Method in class org.rcsb.cif.schema.core.GeomHbond

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSiteSymmetryH() - Method in class org.rcsb.cif.schema.mm.GeomHbond

The symmetry code of the hydrogen-atom site that defines the hydrogen bond.

getSiteSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.AtomSite

The number of different sites that are generated by the application of the space-group symmetry to the coordinates given for this site.

getSiteSymmetryOrder() - Method in class org.rcsb.cif.schema.core.AtomSite

The number of times application of the crystallographic symmetry to the coordinates for this site generates the same coordinates.

getSize() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Description of the collimated source beam as viewed from the sample.

getSize() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The dimensions of the source as viewed from the sample.

getSizeKb() - Method in class org.rcsb.cif.schema.mm.EmMap

map storage size in Kilobytes (before compression)

getSizeLength() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The length of needle/cylindrical crystals.

getSizeMax() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The maximum dimension of a crystal.

getSizeMax() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The maximum dimension of the crystal.

getSizeMid() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The median dimension of a crystal.

getSizeMid() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The medial dimension of the crystal.

getSizeMin() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The minimum dimension of a crystal.

getSizeMin() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The minimum dimension of the crystal.

getSizeOfMoleculePerAsymUnit() - Method in class org.rcsb.cif.schema.mm.PdbxDrugInfo

Size of drug molecules per asymmetric unit.

getSizeRad() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

The radius of a spherical or cylindrical crystal.

getSizeRad() - Method in class org.rcsb.cif.schema.mm.ExptlCrystal

The radius of the crystal, if the crystal is a sphere or a cylinder.

getSkew() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The skew value.

getSkipPDBREMARK() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether to skip production of a PDB REMARK for this file.

getSkipPDBREMARK500() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether to skip production of PDB REMARK 500 for this file.

getSlide() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step slide parameter.

getSmiles() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The smile string of the component.

getSmilesCanonical() - Method in class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

The canonical smile string of the component.

getSoakingDetails() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

Details of the soaking treatment applied to this crystal.

getSoftware() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

software name

getSoftware() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the SOFTWARE category record details about the software used in the structure analysis, which implies any software used in the generation of any data items associated with the structure determination and structure representation.

getSoftwareAuthorList() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A list of the software authors

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

Identifier to the software used to obtain the restraint.

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

Identifier to the software used in the post processing step.

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

Identifier to the software used in the modeling protocol step.

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

Identifier to the software used to obtain the predicted contacts dataset.

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComputationalModels

An identifier to the software used in computational modeling.

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

Pointer to '_pdbx_nmr_software.ordinal'

getSoftwareId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakSoftware

Pointer to '_pdbx_nmr_software.ordinal'

getSoftwareLabel() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

Name given to the software.

getSoftwareList() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

A list of the software used in the modeeling

getSoftwareName() - Method in class org.rcsb.cif.schema.mm.Em2dProjectionSelection

The software used to select 2d projections.

getSoftwareName() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The software used for fitting atomic coordinates to the map.

getSoftwareName() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Name of the software application that the listed constraint file is used as input.

getSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

Pointer to _software.ordinal

getSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrRefine

Pointer to _software.ordinal

getSoftwareOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftwareTask

Pointer to _software.ordinal

getSolId() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

An identifier for the solution to which the given solution component belongs.

getSolId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

An identifier for the solution to which the given solution component belongs.

getSolId() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

An identifier for this solution (e.g.

getSolutionHydrogens() - Method in class org.rcsb.cif.schema.core.AtomSites

Codes which identify the methods used to locate the initial atom sites.

getSolutionHydrogens() - Method in class org.rcsb.cif.schema.mm.AtomSites

This code identifies the method used to locate the hydrogen atoms.

getSolutionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

Pointer to '_pdbx_nmr_exptl_sample.solution_id'

getSolutionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

The solution_id from the Experimental Sample to identify the sample that these conditions refer to.

getSolutionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

The name (number) of the sample.

getSolutionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

The name (number) of the sample.

getSolutionId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

Pointer to '_pdbx_nmr_exptl_sample.solution_id'

getSolutionPrimary() - Method in class org.rcsb.cif.schema.core.AtomSites

Codes which identify the methods used to locate the initial atom sites.

getSolutionPrimary() - Method in class org.rcsb.cif.schema.mm.AtomSites

This code identifies the method used to locate the initial atom sites.

getSolutionSecondary() - Method in class org.rcsb.cif.schema.core.AtomSites

Codes which identify the methods used to locate the initial atom sites.

getSolutionSecondary() - Method in class org.rcsb.cif.schema.mm.AtomSites

This code identifies the method used to locate the non-hydrogen-atom sites not found by _atom_sites.solution_primary.

getSolvent() - Method in class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

Solvent used for the external reference sample.

getSolventAtomsYN() - Method in class org.rcsb.cif.schema.mm.PdbxCoord

Gives information if the coordinates for solvent atoms are available.

getSolventContent() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The solvent content.

getSolventModelDetails() - Method in class org.rcsb.cif.schema.mm.Refine

Special aspects of the solvent model used during refinement.

getSolventModelParamBsol() - Method in class org.rcsb.cif.schema.mm.Refine

The value of the BSOL solvent-model parameter describing the average isotropic displacement parameter of disordered solvent atoms.

getSolventModelParamKsol() - Method in class org.rcsb.cif.schema.mm.Refine

The value of the KSOL solvent-model parameter describing the ratio of the electron density in the bulk solvent to the electron density in the molecular solute.

getSolventOutliers() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

Count of solvent atoms with anonalous positions.

getSolventSystem() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

The solvent system used for this sample.

getSource() - Method in class org.rcsb.cif.schema.core.AtomType

Reference to source of scattering factors used for this atom type.

getSource() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

Reference to source of scattering factors used for this atom type.

getSource() - Method in class org.rcsb.cif.schema.core.DiffrnSource

The general class of the source of radiation.

getSource() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The general class of the radiation source.

getSource() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

The assembly type.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

The information source for the component feature.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The data source for this information.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

The source of the annoation for this entity.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

A data source of this information (e.g.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The information source for the component feature.

getSource() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

The source of this synonym name for the entity.

getSourceBeamline() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The beamline name used for the experiment

getSourceBeamlineInstrument() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The instrumentation used on the beamline

getSourceClass() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The general class of the radiation source.

getSourceDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntryDetails

Additional details about the source and taxonomy of the macromolecular components in this entry.

getSourceDistance() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The distance from source to the sample along the optical axis (metres).

getSourceId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

A identifier within the data source for this information.

getSourceId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

A identifier within the data source for this information.

getSourceOrdinal() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The value of _pdbx_reference_molecule_features.source_ordinal provides the priority order of features from a particular source or database.

getSourceSize() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

The dimension of the source beam measured at the source (micrometres squared).

getSourceType() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The make, model, name or beamline of the source of radiation.

getSpaceGroup() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to specify space group information about the crystal used in the diffraction measurements.

getSpaceGroup() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Contains all the data items that refer to the space group as a whole, such as its name or crystal system.

getSpaceGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Space group name.

getSpaceGroupGenerator() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to list generators for the space group

getSpaceGroupName() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Space group name.

getSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.core.Symmetry

The full international Hermann-Mauguin space-group symbol as defined in Section 2.2.3 and given as the second item of the second line of each of the space-group tables of Part 7 of International Tables for Crystallography Volume A (2002).

getSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.Em2dCrystalEntity

There are 17 plane groups classified as oblique, rectangular, square, and hexagonal.

getSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Hermann-Mauguin space-group symbol reported in the model file.

getSpaceGroupNameH_M() - Method in class org.rcsb.cif.schema.mm.Symmetry

Hermann-Mauguin space-group symbol.

getSpaceGroupNameHall() - Method in class org.rcsb.cif.schema.core.Symmetry

Space group symbol defined by Hall.

getSpaceGroupNameHall() - Method in class org.rcsb.cif.schema.mm.Symmetry

Space-group symbol as described by Hall (1981).

getSpaceGroupNum() - Method in class org.rcsb.cif.schema.mm.Em3dCrystalEntity

Space group number.

getSpaceGroupPointless() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Hermann-Mauguin space-group symbol calculated by the POINTLESS program using the structure factor file.

getSpaceGroupSymop() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of data items used to describe symmetry equivalent sites in the crystal unit cell.

getSpaceGroupSymop() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Contains information about the symmetry operations of the space group.

getSpaceGroupWyckoff() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

Contains information about Wyckoff positions of a space group.

getSpacingX() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of intervals per cell repeat in X.

getSpacingY() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of intervals per cell repeat in Y.

getSpacingZ() - Method in class org.rcsb.cif.schema.mm.EmMap

The number of intervals per cell repeat in Z.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.AtomSites

Information about atomic coordinates not coded elsewhere in the CIF.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Cell

Description of special aspects of the cell choice, noting possible alternative settings.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Citation

Special aspects of the relationship of the data block contents to the literature item cited.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.DatabaseRelated

Information about the external dataset and relationship not encoded elsewhere.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Diffrn

Special details of the diffraction measurement process.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Exptl

Details of the experiment prior to intensity measurement.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Geom

Description of geometry information not covered by the existing data names in the geometry categories, such as least-squares planes.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Refine

Details of the refinement not specified by other data items.

getSpecialDetails() - Method in class org.rcsb.cif.schema.core.Reflns

Description of the properties of the REFLN reflection list that is not given in other data items.

getSpecialDetails() - Method in class org.rcsb.cif.schema.mm.AtomSites

Additional information about the atomic coordinates not coded elsewhere in the CIF.

getSpecialFeature() - Method in class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

Describes special features of NA.

getSpecies() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The species of the organism from which the entity was isolated.

getSpecimenHolderModel() - Method in class org.rcsb.cif.schema.mm.EmImaging

The name of the model of specimen holder used during imaging.

getSpecimenHolderType() - Method in class org.rcsb.cif.schema.mm.EmImaging

The type of specimen holder used during imaging.

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmBuffer

pointer to _em_specimen.id

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Foreign key relationship to the EMD SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmEmbedding

Foreign key relationship to the EMD SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmImaging

Foreign key to the EM_SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmSampleSupport

This data item is a pointer to _em_sample_preparation.id in the EM_SPECIMEN category.

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmShadowing

Foreign key relationship to the EMD SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmStaining

Foreign key relationship to the EMD SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmTomographySpecimen

Foreign key relationship to the EMD SPECIMEN category

getSpecimenId() - Method in class org.rcsb.cif.schema.mm.EmVitrification

This data item is a pointer to _em_specimen.id

getSpecimenSupport() - Method in class org.rcsb.cif.schema.core.Diffrn

Mounting method for the crystal specimum during data collection.

getSpecimenSupport() - Method in class org.rcsb.cif.schema.core.DiffrnMeasurement

Mounting method for the crystal specimum during data collection.

getSpecimenSupport() - Method in class org.rcsb.cif.schema.mm.DiffrnMeasurement

The physical device used to support the crystal during data collection.

getSpecimenType() - Method in class org.rcsb.cif.schema.mm.EmExperiment

The specimen type used in the EM experiment.

getSpecPreparation() - Method in class org.rcsb.cif.schema.mm.PdbxExptlPd

A description of preparation steps for producing the diffraction specimen from the sample.

getSpecPreparationPH() - Method in class org.rcsb.cif.schema.mm.PdbxExptlPd

The pH at which the powder sample was prepared.

getSpecPreparationPHRange() - Method in class org.rcsb.cif.schema.mm.PdbxExptlPd

The range of pH values at which the sample was prepared.

getSpectralPeakListId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

Pointer to '_pdbx_nmr_spectral_peak_list.id'

getSpectralPeakListId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakSoftware

Pointer to '_pdbx_nmr_spectral_peak_list.id'

getSpectralRegion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

A code defining the type of nuclei that would be expected to be observed in the spectral region observed in the dimension of the spectrum.

getSpectrometerId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

Pointer to '_pdbx_nmr_spectrometer.spectrometer_id'

getSpectrometerId() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

Assign a numerical ID to each instrument.

getSphAberrationCorrector() - Method in class org.rcsb.cif.schema.mm.EmImagingOptics

Spherical aberration corrector information

getSrcId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

This data item is an ordinal identifier for entity_src_gen data records.

getSrcMethod() - Method in class org.rcsb.cif.schema.mm.Entity

The method by which the sample for the entity was produced.

getSrcMethod() - Method in class org.rcsb.cif.schema.mm.PdbxSource

Source of biological unit.

getStagger() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair stagger parameter.

getStainingApplied() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

'YES' indicates that the specimen has been stained.

getStandardCode() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying reflections measured repeated as standard intensity.

getStandardCode() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The code identifying that this reflection was measured as a standard intensity.

getStartConstructId() - Method in class org.rcsb.cif.schema.mm.EntitySrcGen

A pointer to _pdbx_construct.id in the PDBX_CONSTRUCT category.

getStartingModelAuthAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The chainId/auth_asym_id corresponding to the starting model.

getStartingModelAuthAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

The author assigned chainId/auth_asym_id corresponding to this starting model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

The identifier for the starting structural model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The identifier for the starting structural model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComputationalModels

The identifier for the starting structural model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The identifier for the starting structural model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

A unique identifier for the starting structural model.

getStartingModelId() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

Unique identifier for the starting model record.

getStartingModelSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The starting residue index of the starting model.

getStartingModelSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The ending residue index of the starting model.

getStartingModelSequenceOffset() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

The offset in residue numbering between the starting model and the deposited I/H model, if applicable.

getStartingModelSource() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelDetails

The source of the starting model.

getStartSeq() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The sequence position at which the feature begins

getStartYear() - Method in class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

Year in which publications began operation..

getStateGroupId() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

An identifier for a collections of states in the multi-state modeling.

getStateId() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModelGroupLink

An identifier for the state.

getStateId() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

A unique identifier for a particular state in the multi-state modeling.

getStateName() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

A descriptive name for the state.

getStateProvince() - Method in class org.rcsb.cif.schema.mm.PdbxContactAuthor

The mailing address of the author of the data block to whom correspondence should be addressed, state or province.

getStateType() - Method in class org.rcsb.cif.schema.mm.IhmMultiStateModeling

The type that the multiple states being modeled belong to.

getStatisticsAverage() - Method in class org.rcsb.cif.schema.mm.EmMap

Mean (average) density value of the map.

getStatisticsMaximum() - Method in class org.rcsb.cif.schema.mm.EmMap

Maximum density value of the map.

getStatisticsMinimum() - Method in class org.rcsb.cif.schema.mm.EmMap

Minimum density value of the map.

getStatisticsStd() - Method in class org.rcsb.cif.schema.mm.EmMap

The standard deviation of the map density values.

getStatus() - Method in class org.rcsb.cif.schema.core.Refln

Code indicating how the reflection was included in the refinement and R-factor calculations.

getStatus() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRev

The status of this revision.

getStatus() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Release status associated with this component.

getStatus() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingStatus

A data processing workflow task status code.

getStatus() - Method in class org.rcsb.cif.schema.mm.Refln

Classification of a reflection so as to indicate its status with respect to inclusion in the refinement and the calculation of R factors.

getStatusCode() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Code for status of file.

getStatusCode() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

Current entry processing status.

getStatusCodeCs() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Code for status of chemical shift data file.

getStatusCodeMr() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Code for status of NMR constraints file.

getStatusCodeNmrData() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Code for status of unified NMR data file.

getStatusCodeSf() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Code for status of structure factor file.

getStatusCoordinatesInNDB() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

Give information about status of coordinates of an entry in NDB.

getStatusFlag() - Method in class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

A flag to indicate that this data is relevant to the current entry

getStatusFlag() - Method in class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

A flag to indicate that this data is relevant to the current entry

getStepDescription() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

Description of the step.

getStepId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

In a multi-step process, this identifier denotes the particular step in the post modeling analysis.

getStepId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

An index for a particular step within the modeling protocol.

getStepId() - Method in class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

Identifier for a particular step in the ordered process.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

This item is the unique identifier for the step whose product has been characterised.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

This item is the unique identifier for this chromatography step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

This item is the unique identifier for this cloning step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

This item is a pointer to _pdbx_entity_src_gen_clone.step_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

This item is a pointer to _pdbx_entity_src_gen_clone.step_id in the PDBX_ENTITY_SRC_GEN_CLONE category.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

This item is the unique identifier for this expression step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

This item is a pointer to _pdbx_entity_src_gen_express.step_id

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

This item is the unique identifier for this fractionation step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

This item is the unique identifier for this lysis step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

This item is the unique identifier for this digestion step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

This item is the unique identifier for this process step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

This item is a pointer to _pdbx_entity_src_gen_prod_other.step_id

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

This item is the unique identifier for this PCR step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

This item is the unique identifier for this tag removal step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

This item unique identifier the production step.

getStepId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item is the unique identifier for this refolding step.

getStepMethod() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

Description of the method involved in the modeling step.

getStepName() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

The name or type of the modeling step.

getStepName() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The text name of this step.

getStepNumber() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The sequence number of this step in the step sequence.

getStorageBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getStorageBufferId() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.

getStorageDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Details of how the harvested culture was stored.

getStorageTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

The temperature in degrees celsius at which the protein was stored.

getStorageType() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The storate type of the referenced data file.

getStrain() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The strain of the natural organism from which the component was obtained, if relevant.

getStrain() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyRecombinant

The strain of the host organism from which the expresed component was obtained, if relevant.

getStrain() - Method in class org.rcsb.cif.schema.mm.EmVirusNaturalHost

The strain of the host organism from which the virus was obtained, if relevant.

getStrain() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The strain of the organism from which the entity was isolated.

getStrain() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

The strain of the organism from which the sequence of the synthetic entity was derived.

getStrain() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The strain of the organism from which the entity was isolated.

getStrandDescription() - Method in class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

Gives general structural description of NA.

getStrandId() - Method in class org.rcsb.cif.schema.mm.PdbxHybrid

Strand id.

getStretch() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePair

The value of the base pair stretch parameter.

getStringData(int) - Method in class org.rcsb.cif.model.binary.BinaryFloatColumn

getStringData(int) - Method in class org.rcsb.cif.model.binary.BinaryIntColumn

getStringData(int) - Method in class org.rcsb.cif.model.binary.BinaryStrColumn

getStringData(int) - Method in class org.rcsb.cif.model.Column.EmptyColumn

getStringData(int) - Method in interface org.rcsb.cif.model.Column

Access to entries of this Column without any assumptions about the content type.

getStringData(int) - Method in class org.rcsb.cif.model.text.TextColumn

getStringData(int) - Method in class org.rcsb.cif.schema.DelegatingColumn

getStruct() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT category record details about the description of the crystallographic structure.

getStructAssemblyDescription() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

A textual description of the structural assembly being modeled.

getStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

An indicator to whether the whole assembly that is modeled is fit into the image or if only a subset of the structural assembly is fit into the image.

getStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.Ihm3demRestraint

An indicator to whether the whole assembly that is modeled is fit into the 3DEM map or if only a subset of the structural assembly is fit into the map.

getStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

An index for the structural assembly being processed.

getStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

An index for the structural assembly being modeled.

getStructAssemblyId() - Method in class org.rcsb.cif.schema.mm.IhmSasRestraint

An indicator to whether the whole assembly that is modeled is fit into the SAS data or if only a subset of the structural assembly is fit into the data.

getStructAsym() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_ASYM category record details about the structural elements in the asymmetric unit.

getStructBiol() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_BIOL category record details about the structural elements that form each structure of biological significance.

getStructBiolGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_BIOL_GEN category record details about the generation of each biological unit.

getStructBiolKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_BIOL_KEYWORDS category record keywords that describe each biological unit.

getStructBiolView() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_BIOL_VIEW category record details about how to draw and annotate an informative view of the biological structure.

getStructConf() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_CONF category record details about the backbone conformation of a segment of polymer.

getStructConfType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_CONF_TYPE category record details about the criteria used to identify backbone conformations of a segment of polymer.

getStructConn() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_CONN category record details about the connections between portions of the structure.

getStructConnType() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_CONN_TYPE category record details about the criteria used to identify interactions between portions of the structure.

getStructGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

This data item is a pointer to _pdbx_struct_group_list.struct_group_id in the PDBX_STRUCT_GROUP_LIST category.

getStructGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

The value of _pdbx_struct_group_components.group_id identifies the group assignment for the component.

getStructGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

The unique identifier for the group.

getStructKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_KEYWORDS category specify keywords that describe the chemical structure in this entry.

getStructMonDetails() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_MON_DETAILS category record details about specifics of calculations summarized in data items in the STRUCT_MON_PROT and STRUCT_MON_NUCL categories.

getStructMonNucl() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_MON_NUCL category record details about structural properties of a nucleic acid when analyzed at the monomer level.

getStructMonProt() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_MON_PROT category record details about structural properties of a protein when analyzed at the monomer level.

getStructMonProtCis() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_MON_PROT_CIS category identify monomers that have been found to have the peptide bond in the cis conformation.

getStructNcsDom() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_NCS_DOM category record information about the domains in an ensemble of domains related by one or more noncrystallographic symmetry operators.

getStructNcsDomLim() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry.

getStructNcsEns() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_NCS_ENS category record information about ensembles of domains related by noncrystallographic symmetry.

getStructNcsEnsGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_NCS_ENS_GEN category list domains related by a noncrystallographic symmetry operation and identify the operator.

getStructNcsOper() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_NCS_OPER category describe the noncrystallographic symmetry operations.

getStructRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_REF category allow the author of a data block to relate the entities or biological units described in the data block to information archived in external databases.

getStructRefSeq() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_REF_SEQ category provide a mechanism for indicating and annotating a region (or regions) of alignment between the sequence of an entity or biological unit described in the data block and the sequence in the referenced database entry.

getStructRefSeqDif() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_REF_SEQ_DIF category provide a mechanism for indicating and annotating point differences between the sequence of the entity or biological unit described in the data block and the sequence of the referenced database entry.

getStructSheet() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SHEET category record details about the beta-sheets.

getStructSheetHbond() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SHEET_HBOND category record details about the hydrogen bonding between residue ranges in a beta- sheet.

getStructSheetOrder() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SHEET_ORDER category record details about the order of the residue ranges that form a beta-sheet.

getStructSheetRange() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SHEET_RANGE category record details about the residue ranges that form a beta-sheet.

getStructSheetTopology() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SHEET_TOPOLOGY category record details about the topology of the residue ranges that form a beta-sheet.

getStructSite() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SITE category record details about portions of the structure that contribute to structurally relevant sites (e.g.

getStructSiteGen() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SITE_GEN category record details about the generation of portions of the structure that contribute to structurally relevant sites.

getStructSiteKeywords() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SITE_KEYWORDS category record keywords describing the site.

getStructSiteView() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the STRUCT_SITE_VIEW category record details about how to draw and annotate an informative view of the site.

getStructural() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

This formula should correspond to the structure as reported, i.e.

getStructural() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

See the CHEMICAL_FORMULA category description for the rules for writing chemical formulae for inorganics, organometallics, metal complexes etc., in which bonded groups are preserved as discrete entities within parentheses, with post-multipliers as required.

getStructuralGenomicsFlag() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

A flag to indicate the that the deposition is a contribution from a structural genomics project.

getStructure() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The DICTIONARY group encompassing the CORE STRUCTURE data items defined and used with in the Crystallographic Information Framework (CIF).

getStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.Refine

Structure-factor coefficient used in the least-squares process.

getStructureFactorCoef() - Method in class org.rcsb.cif.schema.core.RefineLs

Structure-factor coefficient used in the least-squares process.

getStructureFactorsYN() - Method in class org.rcsb.cif.schema.mm.PdbxCoord

Gives information if the structure factors for this entry are available.

getStructureRefinement() - Method in class org.rcsb.cif.schema.core.Computing

Brief description of software used for structure refinement.

getStructureRefinement() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for refinement of the structure.

getStructureSolution() - Method in class org.rcsb.cif.schema.core.Computing

Brief description of software used for structure solution.

getStructureSolution() - Method in class org.rcsb.cif.schema.mm.Computing

Software used for solution of the structure.

getStructureSolution() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the name of the software used to calculate the structure.

getStructureSolutionVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrComputing

Enter the version of the software used to calculate the structure.

getSubSampleFlag() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

Indicate if the ensemble consists of sub samples.

getSubSamplingType() - Method in class org.rcsb.cif.schema.mm.IhmEnsembleInfo

Indicate the sub sampling type, if applicable.

getSubstructCode() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

This data item assigns the atom to a substructure of the component, if appropriate.

getSubterm() - Method in class org.rcsb.cif.schema.core.JournalIndex

Sub-term index assigned for the publication.

getSubterm() - Method in class org.rcsb.cif.schema.mm.JournalIndex

Journal index data items are defined by the journal staff.

getSugarName() - Method in class org.rcsb.cif.schema.mm.PdbxHybrid

Name of sugar group of residue.

getSum() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Chemical formulae in which all discrete bonded residues and ions are summed over the constituent elements, following the ordering given in rule 5 of the CATEGORY description.

getSum() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

See the CHEMICAL_FORMULA category description for the rules for writing chemical formulae in which all discrete bonded residues and ions are summed over the constituent elements, following the ordering given in general rule (5) in the CHEMICAL_FORMULA category description.

getSummary() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

Summary of ligation or recombionation cloning used, the associated verification method and any purification of the product.

getSummary() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Summary of the details of the expression steps used in protein production.

getSummary() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

Summary of the details of restriction digestion any purification of the product of the digestion.

getSummary() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

Summary of the details of the PCR reaction any purification of the product of the PCR reaction.

getSummary() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

Summary of the details of protein purification method used to obtain the final protein product.

getSupplPublNumber() - Method in class org.rcsb.cif.schema.core.Journal

Number of supplementary publication.

getSupplPublNumber() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getSupplPublPages() - Method in class org.rcsb.cif.schema.core.Journal

Number of pages in the supplementary publication.

getSupplPublPages() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getSupport() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

The supporting evidence for this feature.

getSupport() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

Text describing the experimentation or computational evidence for the annotation.

getSupportBase() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Type of base holding the support

getSupportId() - Method in class org.rcsb.cif.schema.mm.EmSamplePreparation

This data item is a pointer to _em_sample_support.id in the EM_SAMPLE_SUPPORT category.

getSweepWidth() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The width of the spectral window observed in Hz.

getSweepWidthUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The units for the sweep width value (Hz or ppm)

getSymbol() - Method in class org.rcsb.cif.schema.core.AtomType

The identity of the atom specie(s) representing this atom type.

getSymbol() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

The identity of the atom specie(s) representing this atom type.

getSymbol() - Method in class org.rcsb.cif.schema.mm.AtomType

The code used to identify the atom species (singular or plural) representing this atom type.

getSymEquiv() - Method in class org.rcsb.cif.schema.core.Function

The function xyz' = SymEquiv( symop, xyz ) returns a fractional coordinate vector xyz' which is input vector xyz transformed by the input symop 'n_pqr' applied to the symmetry equivalent matrix extracted from the category space_group_symop.

getSymKey() - Method in class org.rcsb.cif.schema.core.Function

The function m = SymKey( s ) returns an integer index to the Seitz matrices from the character string of the form 'n_pqr'.

getSymLat() - Method in class org.rcsb.cif.schema.core.Function

The function v = SymLat( s ) returns a vector of the cell translations applied to the coordinates from the character string of the form 'n_pqr'.

getSymmAsXyz1() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

The symmetry of the first of the two atoms define the close contact.

getSymmAsXyz2() - Method in class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

The symmetry of the second of the two atoms define the close contact.

getSymmetry() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getSymmetry() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the SYMMETRY category record details about the space-group symmetry.

getSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

Describes the symmetry operation that should be applied to the target solvent atom

getSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxStructPackGen

Describes the symmetry operation that should be applied to the atom set specified by _pdbx_struct_pack_gen.asym_id to generate a packing picture.

getSymmetry() - Method in class org.rcsb.cif.schema.mm.StructBiolGen

Describes the symmetry operation that should be applied to the atom set specified by _struct_biol_gen.asym_id to generate a portion of the biological structure.

getSymmetry() - Method in class org.rcsb.cif.schema.mm.StructSheetRange

Describes the symmetry operation that should be applied to the residues delimited by the start and end designators in order to generate the appropriate strand in this sheet.

getSymmetry() - Method in class org.rcsb.cif.schema.mm.StructSiteGen

Describes the symmetry operation that should be applied to the atom set specified by _struct_site_gen.label* to generate a portion of the site.

getSymmetryAsXyz() - Method in class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

The symmetry applied to the target solvent atom.

getSymmetryDescription() - Method in class org.rcsb.cif.schema.core.Diffrn

Recorded diffraction point symmetry, systematic absences and possible space group(s) or superspace group(s) compatible with these.

getSymmetryEpsilon() - Method in class org.rcsb.cif.schema.core.Refln

The symmetry reinforcement factor corresponding to the number of times the reflection indices are generated identically from the space-group symmetry operations.

getSymmetryEpsilon() - Method in class org.rcsb.cif.schema.mm.Refln

The symmetry reinforcement factor corresponding to the number of times the reflection indices are generated identically from the space-group symmetry operations.

getSymmetryEquiv() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

getSymmetryEquiv() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the SYMMETRY_EQUIV category list the symmetry-equivalent positions for the space group.

getSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.AtomSite

The number of different sites that are generated by the application of the space-group symmetry to the coordinates given for this site.

getSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.core.Refln

The number of reflections symmetry-equivalent under the Laue symmetry to the present reflection.

getSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.mm.AtomSite

The multiplicity of a site due to the space-group symmetry as is given in International Tables for Crystallography Vol.

getSymmetryMultiplicity() - Method in class org.rcsb.cif.schema.mm.Refln

The number of symmetry-equivalent reflections.

getSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

This item expresses the transformation on an X, Y and Z basis.

getSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The symmetry operation corresponding to the transformation operation.

getSymmetryOperation() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The symmetry operation corresponding to the transformation operation.

getSymmetrySpaceGroup() - Method in class org.rcsb.cif.schema.mm.EmMap

The space group number for the map.

getSymmetryType() - Method in class org.rcsb.cif.schema.mm.Em3dReconstruction

The type of symmetry applied to the reconstruction

getSymmetryType() - Method in class org.rcsb.cif.schema.mm.EmSingleParticleEntity

The single particle symmetry type.

getSymop() - Method in class org.rcsb.cif.schema.core.Function

The function s = Symop( n, t ) returns a character string of the form 'n_pqr' where n is the symmetry equivalent site number and [p,q,r] is the cell translation vector PLUS [5,5,5].

getSymop() - Method in class org.rcsb.cif.schema.core.ModelSite

The set of data items which specify the symmetry operation codes which must be applied to the atom sites involved in the geometry angle.

getSynonym() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

Alternative name of the component.

getSynopsis() - Method in class org.rcsb.cif.schema.core.Publ

The synopsis of the submitted paper.

getSynopsis() - Method in class org.rcsb.cif.schema.core.PublSection

The synopsis of the submitted paper.

getSystem() - Method in class org.rcsb.cif.schema.mm.EntityNameSys

The system used to generate the systematic name of the entity.

getSystem() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

The name of the recombination system.

getT() - Method in class org.rcsb.cif.schema.core.SpaceGroupSymop

A vector containing the symmetry translation operations of a space group.

getT11() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT11Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getT12() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT12Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getT13() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT13Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getT22() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT22Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getT23() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT23Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getT33() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The elements of the translation tensor T.

getT33Esd() - Method in class org.rcsb.cif.schema.mm.PdbxRefineTls

The estimated standard deviation of _pdbx_refine_tls.T.

getTableLegends() - Method in class org.rcsb.cif.schema.core.Publ

The table legends of the submitted paper.

getTableLegends() - Method in class org.rcsb.cif.schema.core.PublSection

The table legends of the submitted paper.

getTablename() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL table name.

getTablename() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table name.

getTableSerialNo() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL table serial number.

getTableSerialNo() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table serial number.

getTake_offAngle() - Method in class org.rcsb.cif.schema.core.DiffrnSource

The complement of the angle in degrees between the normal to the surface of the X-ray tube target and the primary X-ray beam for beams generated by traditional X-ray tubes.

getTake_offAngle() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The complement of the angle in degrees between the normal to the surface of the X-ray tube target and the primary X-ray beam for beams generated by traditional X-ray tubes.

getTakeOffAngle() - Method in class org.rcsb.cif.schema.core.DiffrnSource

The complement of the angle in degrees between the normal to the surface of the X-ray tube target and the primary X-ray beam for beams generated by traditional X-ray tubes.

getTarget() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Chemical element symbol for the radiation source target (usually the anode).

getTarget() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The chemical element symbol for the X-ray target (usually the anode) used to generate X-rays.

getTargetCriteria() - Method in class org.rcsb.cif.schema.mm.Em3dFitting

The measure used to assess quality of fit of the atomic coordinates in the 3DEM map volume.

getTask() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftwareTask

A word or brief phrase that describes the task that a software application was used to carry out.

getTaskName() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingStatus

A data processing workflow task name.

getTau0() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle tau0 (C4'-O4'-C1'-C2').

getTau1() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle tau1 (O4'-C1'-C2'-C3').

getTau2() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle tau2 (C1'-C2'-C3'-C4').

getTau3() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle tau3 (C2'-C3'-C4'-O4').

getTau4() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the sugar torsion angle tau4 (C3'-C4'-O4'-C1').

getTaum() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The maximum amplitude of puckering.

getTaxid() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

The NCBI TaxId of the organism from which the entity was isolated.

getTaxonomyClass() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The NCBI taxonomy classification of the organism for this linked entity example.

getTaxonomyId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

The NCBI taxonomy identifier of the organism for the linked entity example.

getTecheditorAddress() - Method in class org.rcsb.cif.schema.core.Journal

Postal address of the technical editor for this publication.

getTecheditorAddress() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorCode() - Method in class org.rcsb.cif.schema.core.Journal

Code of the technical editor for this publication.

getTecheditorCode() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorEmail() - Method in class org.rcsb.cif.schema.core.Journal

Email address of the technical editor for this publication.

getTecheditorEmail() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorFax() - Method in class org.rcsb.cif.schema.core.Journal

Fax number of the technical editor for this publication.

getTecheditorFax() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorName() - Method in class org.rcsb.cif.schema.core.Journal

Name of the technical editor for this publication.

getTecheditorName() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorNotes() - Method in class org.rcsb.cif.schema.core.Journal

Notes of the technical editor for this publication.

getTecheditorNotes() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTecheditorPhone() - Method in class org.rcsb.cif.schema.core.Journal

Phone number of the technical editor for this publication.

getTecheditorPhone() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getTemp() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The temperature at which the unit-cell parameters were measured (not the temperature of synthesis).

getTemp() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The temperature in kelvins at which the unit-cell parameters were measured (not the temperature of synthesis).

getTemp() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The vitrification temperature (in degrees Kelvin), e.g., temperature of the plunge instrument cryogen bath.

getTemp() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The temperature in kelvins at which the crystal was grown.

getTemp() - Method in class org.rcsb.cif.schema.mm.PhasingSet

The temperature in kelvins at which the data set was measured.

getTempDetails() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

A description of special aspects of temperature control during crystal growth.

getTemperature() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The temperature at which the unit-cell parameters were measured (not the temperature of synthesis).

getTemperature() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

The value of the temperature in degrees Kelvin used for growing the crystals.

getTemperature() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Temperature of the sample during milling, in degrees Kelvin

getTemperature() - Method in class org.rcsb.cif.schema.mm.EmImaging

The mean specimen stage temperature (degrees Kelvin) during imaging in the microscope.

getTemperature() - Method in class org.rcsb.cif.schema.mm.EmUltramicrotomy

Temperature of the sample during microtome sectioning, in degrees Kelvin

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

The temperature at which the ligation experiment was performed, in degrees celsius.

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

The temperature in degrees celsius at which the fractionation was performed.

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The temperature in degrees celsius at which the lysis was performed.

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

The temperature in degrees celsius at which the protein was refolded.

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

The temperature (in Kelvin) at which NMR data were collected.

getTemperature() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The temperature in kelvins at which the experiment was conducted

getTemperatureDecomposition() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature at which a crystalline solid decomposes.

getTemperatureDecomposition() - Method in class org.rcsb.cif.schema.mm.Chemical

The temperature in kelvins at which the solid decomposes.

getTemperatureDecompositionEsd() - Method in class org.rcsb.cif.schema.core.Chemical

Standard Uncertainty of the temperature at which a crystalline solid decomposes.

getTemperatureDecompositionEsd() - Method in class org.rcsb.cif.schema.mm.Chemical

The estimated standard deviation of _chemical.temperature_decomposition.

getTemperatureDecompositionGt() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature above which a crystalline solid decomposes.

getTemperatureDecompositionGt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins above which the solid is known to decompose.

getTemperatureDecompositionLt() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature below which a crystalline solid decomposes.

getTemperatureDecompositionLt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins below which the solid is known to decompose.

getTemperatureDecompositionSu() - Method in class org.rcsb.cif.schema.core.Chemical

Standard Uncertainty of the temperature at which a crystalline solid decomposes.

getTemperatureErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Estimate of the standard error for the value for the sample temperature.

getTemperatureSu() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The standard uncertainty of the temperature of at which the unit-cell parameters were measured.

getTemperatureSublimation() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature at which a crystalline solid sublimates.

getTemperatureSublimation() - Method in class org.rcsb.cif.schema.mm.Chemical

The temperature in kelvins at which the solid sublimes.

getTemperatureSublimationEsd() - Method in class org.rcsb.cif.schema.core.Chemical

Standard Uncertainty of the temperature at which a crystalline solid sublimates.

getTemperatureSublimationEsd() - Method in class org.rcsb.cif.schema.mm.Chemical

The estimated standard deviation of _chemical.temperature_sublimation.

getTemperatureSublimationGt() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature above which a crystalline solid sublimates.

getTemperatureSublimationGt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins above which the solid is known to sublime.

getTemperatureSublimationLt() - Method in class org.rcsb.cif.schema.core.Chemical

The temperature below which a crystalline solid sublimates.

getTemperatureSublimationLt() - Method in class org.rcsb.cif.schema.mm.Chemical

A temperature in kelvins below which the solid is known to sublime.

getTemperatureSublimationSu() - Method in class org.rcsb.cif.schema.core.Chemical

Standard Uncertainty of the temperature at which a crystalline solid sublimates.

getTemperatureUnits() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

Units for the value of the sample condition temperature.

getTempEsd() - Method in class org.rcsb.cif.schema.core.CellMeasurement

The standard uncertainty of the temperature of at which the unit-cell parameters were measured.

getTempEsd() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The standard uncertainty (estimated standard deviation) of _cell_measurement.temp.

getTempEsd() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The standard uncertainty (estimated standard deviation) of _exptl_crystal_grow.temp.

getTemplateAuthAsymId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The chainId/auth_asym_id corresponding to the template.

getTemplateDatasetListId() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The dataset list id corresponding to the template used to obtain the comparative model.

getTemplateSeqIdBegin() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The starting residue index of the template.

getTemplateSeqIdEnd() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The ending residue index of the template.

getTemplateSequenceIdentity() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The percentage sequence identity between the template sequence and the comparative model sequence.

getTemplateSequenceIdentityDenominator() - Method in class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

The denominator used while calculating the sequence identity provided in _ihm_starting_comparative_models.template_sequence_identity.

getTensorBeta() - Method in class org.rcsb.cif.schema.core.AtomSite

The symmetric anisotropic atomic displacement tensor beta[I,J] appears in a structure factor expression as: t = exp -[ beta11 h h + ............

getTerm() - Method in class org.rcsb.cif.schema.core.JournalIndex

Term index assigned for the publication.

getTerm() - Method in class org.rcsb.cif.schema.mm.JournalIndex

Journal index data items are defined by the journal staff.

getText() - Method in class org.rcsb.cif.schema.core.Publ

The full manuscript of a paper (excluding figures and possibly the tables) output as standard ASCII text.

getText() - Method in class org.rcsb.cif.schema.core.PublManuscript

The full manuscript of a paper (excluding figures and possibly the tables) output as standard ASCII text.

getText() - Method in class org.rcsb.cif.schema.mm.AtomSitesFootnote

The text of the footnote.

getText() - Method in class org.rcsb.cif.schema.mm.DatabasePDBCaveat

The full text of the PDB caveat record.

getText() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRemark

The full text of the PDB remark record.

getText() - Method in class org.rcsb.cif.schema.mm.EntityKeywords

Keywords describing this entity.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseRemark

The full text of the PDB remark record.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxNmrDetails

Additional details describing the NMR experiment.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxPdbCompnd

PDB COMPND record.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxPdbSource

PDB SOURCE record.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxPostProcessDetails

The text description of changes required to standardize this entry.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

Text describing the annotation for this entity.

getText() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

The text of the description of special aspects of the entity.

getText() - Method in class org.rcsb.cif.schema.mm.StructBiolKeywords

Keywords describing this biological entity.

getText() - Method in class org.rcsb.cif.schema.mm.StructKeywords

Keywords describing this structure.

getText() - Method in class org.rcsb.cif.schema.mm.StructSiteKeywords

Keywords describing this site.

getTextDataFormat() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

The data format used to represent the spectral peak data as ASCII text in the text block that is the value to the '_Spectral_peak_list.Text_data' tag.

getThermalDisplaceType() - Method in class org.rcsb.cif.schema.core.AtomSite

Code for type of atomic displacement parameters used for the site.

getThermalDisplaceType() - Method in class org.rcsb.cif.schema.mm.AtomSite

A standard code used to describe the type of atomic displacement parameters used for the site.

getThermalHistory() - Method in class org.rcsb.cif.schema.core.ExptlCrystal

Details concerning the thermal history of the crystals.

getTheta() - Method in class org.rcsb.cif.schema.core.CellMeasurementRefln

Theta angle of reflection used to measure the crystal unit cell.

getTheta() - Method in class org.rcsb.cif.schema.mm.CellMeasurementRefln

Theta angle for a reflection used for measurement of the unit cell in degrees.

getThetaFull() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Theta angle at which the count of measured reflections is almost complete.

getThetaMax() - Method in class org.rcsb.cif.schema.core.CellMeasurement

Maximum theta scattering angle of reflections used to measure the crystal unit cell.

getThetaMax() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Maximum theta angle of the measured reflections.

getThetaMax() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The maximum theta angle of reflections used to measure the unit cell in degrees.

getThetaMax() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

Maximum theta angle in degrees for the measured diffraction intensities.

getThetaMin() - Method in class org.rcsb.cif.schema.core.CellMeasurement

Minimum theta scattering angle of reflections used to measure the crystal unit cell.

getThetaMin() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

Minimum theta angle of the measured reflections.

getThetaMin() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The minimum theta angle of reflections used to measure the unit cell in degrees.

getThetaMin() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

Minimum theta angle in degrees for the measured diffraction intensities.

getThickness() - Method in class org.rcsb.cif.schema.mm.EmShadowing

Thickness of the deposited shadow coat, in Angstroms.

getThickness() - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

Thickness of the support film, in Angstroms

getThicknessTh() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectHalfTorus

Thickness "th" of the half-torus.

getThreeLetterCode() - Method in class org.rcsb.cif.schema.mm.ChemComp

For standard polymer components, the common three-letter code for the component.

getThresholdExpression() - Method in class org.rcsb.cif.schema.core.Reflns

Description of the criterion used to classify a reflection as having a "significant intensity".

getThresholdExpression() - Method in class org.rcsb.cif.schema.mm.Reflns

The threshold, usually based on multiples of u(I), u(F^2^) or u(F), that serves to identify significantly intense reflections, the number of which is given by _reflns.number_gt.

getTIJ() - Method in class org.rcsb.cif.schema.core.DiffrnReflnsTransfMatrix

Elements of the matrix used to transform the diffraction reflection indices _diffrn_refln.hkl into the _refln.hkl indices.

getTilt() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step tilt parameter.

getTiltAngleList() - Method in class org.rcsb.cif.schema.mm.EmDiffraction

Comma-separated list of tilt angles (in degrees) used in the electron diffraction experiment.

getTiltAngleMax() - Method in class org.rcsb.cif.schema.mm.EmImaging

The maximum angle at which the specimen was tilted to obtain recorded images.

getTiltAngleMin() - Method in class org.rcsb.cif.schema.mm.EmImaging

The minimum angle at which the specimen was tilted to obtain recorded images.

getTime() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Time period for array crystallization, in time unit indicated (min, hr, day, month, year)

getTime() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

Time period for glow discharge of the em grid, in seconds

getTime() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrow

The approximate time that the crystal took to grow to the size used for data collection.

getTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

The duration of the ligation reaction in minutes.

getTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

The time in hours after induction/transformation/transfection at which the optical density of the culture was measured.

getTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

The time in seconds of the lysis experiment.

getTime() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

The time in hours over which the protein was refolded.

getTimeResolvedState() - Method in class org.rcsb.cif.schema.mm.EmVitrification

The length of time after an event effecting the sample that vitrification was induced and a description of the event.

getTimestamp() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

A the date and time of message creation.

getTimeUnit() - Method in class org.rcsb.cif.schema.mm.EmCrystalFormation

Time unit for array crystallization

getTip() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step twist parameter.

getTissue() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource

The tissue of the natural organism from which the component was obtained.

getTissue() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The tissue of the organism from which the entity was isolated.

getTissueFraction() - Method in class org.rcsb.cif.schema.mm.EntitySrcNat

The subcellular fraction of the tissue of the organism from which the entity was isolated.

getTitle() - Method in class org.rcsb.cif.schema.core.Citation

Title of citation; relevant for articles and book chapters.

getTitle() - Method in class org.rcsb.cif.schema.core.Publ

The full title of the submitted paper.

getTitle() - Method in class org.rcsb.cif.schema.core.PublBody

Title of the associated section of text.

getTitle() - Method in class org.rcsb.cif.schema.core.PublSection

The full title of the submitted paper.

getTitle() - Method in class org.rcsb.cif.schema.mm.Citation

The title of the citation; relevant for journal articles, books and book chapters.

getTitle() - Method in class org.rcsb.cif.schema.mm.EmAdmin

Title for the EMDB entry.

getTitle() - Method in class org.rcsb.cif.schema.mm.PublBody

Title of the associated section of text.

getTitle() - Method in class org.rcsb.cif.schema.mm.Struct

A title for the data block.

getTitleFootnote() - Method in class org.rcsb.cif.schema.core.Publ

Footnote (if any) to the title of the submitted paper.

getTitleFootnote() - Method in class org.rcsb.cif.schema.core.PublSection

Footnote (if any) to the title of the submitted paper.

getTitleSuppression() - Method in class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

This code indicates whether to suppress the entry title.

getTlsGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item identifies the TLS group membership for this atom.

getTlsGroupNumber() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Number of TLS groups used in refinement.

getTlsNoAniso() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

A flag to indicate if the uploaded model has TLS records but no anisotropic ones.

getTLSRefinementReported() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Whether TLS was used in refinement.

getToAtomId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The atom identifier/name in the first of the two constituents containing the linkage.

getToCoeditor() - Method in class org.rcsb.cif.schema.core.Journal

Date the publication sent to the coeditor.

getToCoeditor() - Method in class org.rcsb.cif.schema.core.JournalDate

Date the publication sent to the coeditor.

getToCompId() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The component identifier in the first of the two constituents containing the linkage.

getTopolFile() - Method in class org.rcsb.cif.schema.mm.PdbxXplorFile

Topology file name in X-PLOR/CNS refinement.

getTopology() - Method in class org.rcsb.cif.schema.mm.EmSupportFilm

The topology of the material from which the grid is made.

getTorId() - Method in class org.rcsb.cif.schema.mm.ChemCompTorValue

This data item is a pointer to _chem_comp_tor.id in the CHEM_COMP_TOR category.

getTorId() - Method in class org.rcsb.cif.schema.mm.ChemLinkTorValue

This data item is a pointer to _chem_link_tor.id in the CHEM_LINK_TOR category.

getTorsionAngleConstraintViolationMethod() - Method in class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

This item describes the method used to calculate the torsion angle constraint violation statistics.

getTransfMatrix11() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix11() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix12() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix12() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix13() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix13() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix21() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix21() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix22() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix22() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix23() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix23() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix31() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix31() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix32() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix32() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransfMatrix33() - Method in class org.rcsb.cif.schema.core.DiffrnReflns

The set of data items which specify the elements of the matrix used to transform the reflection indices _diffrn_refln.hkl into _refln.hkl.

getTransfMatrix33() - Method in class org.rcsb.cif.schema.mm.DiffrnReflns

The elements of the 3x3 matrix used to transform Miller indices in the DIFFRN_REFLN category into the Miller indices in the REFLN category.

getTransformationId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectAxis

Identifier to the description of the transformation.

getTransformationId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectPlane

Identifier to the description of the transformation.

getTransformationId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

Identifier to the description of the transformation.

getTransformationId() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

Identifier to the description of the transformation.

getTransformationId() - Method in class org.rcsb.cif.schema.mm.IhmRelatedDatasets

A pointer to the transformation matrix, if applicable.

getTransformationMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The method used to transform the expression cell line with the vector

getTranslationalPseudoSymmetry() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Boolean whether translational pseudo symmetry exist (Y) or not (N) as determined by Xtriage.

getTransmissionFactorMax() - Method in class org.rcsb.cif.schema.core.Exptl

The calculated maximum value of the transmission factor for the specimen.

getTransmissionFactorMin() - Method in class org.rcsb.cif.schema.core.Exptl

The calculated minimum value of the transmission factor for the specimen.

getTreatment() - Method in class org.rcsb.cif.schema.mm.RefineBIso

The treatment of isotropic B-factor (displacement-parameter) refinement for a class of atoms defined in _refine_B_iso.class.

getTreatment() - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

The treatment of occupancies for a class of atoms described in _refine_occupancy.class.

getTriangulation() - Method in class org.rcsb.cif.schema.mm.EmVirusShell

The triangulation number (T number) is a geometric concept that refers to the organisation of subunits within the icosahedron.

getTrVector1() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the tranlation vector used in the fitting of the model to the image.

getTrVector1() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the translation vector used in the transformation.

getTrVector1() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the translation vector used in the transformation.

getTrVector2() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the tranlation vector used in the fitting of the model to the image.

getTrVector2() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the translation vector used in the transformation.

getTrVector2() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the translation vector used in the transformation.

getTrVector3() - Method in class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Data item of the tranlation vector used in the fitting of the model to the image.

getTrVector3() - Method in class org.rcsb.cif.schema.mm.IhmDataTransformation

Data item of the translation vector used in the transformation.

getTrVector3() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

Data item of the translation vector used in the transformation.

getTwinByXtriage() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Boolean (Y/N) whether twin is detected by Xtriage.

getTwinFraction() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Twin fractions determined by REFMAC.

getTwinFractionXtriage() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The twin fraction determined by Xtriage.

getTwinOperator() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Twin operators determined by REFMAC.

getTwinOperatorXtriage() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

A list of the twin operators determined by Xtriage.

getTwinRfactor() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The Rfactor calculated by Xtriage using the twin operator related data.

getTwinType() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Type of twin (merohedral,Pseudo-merohedral or non-merohedral) determined by Xtriage.

getTwist() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step twist parameter.

getType() - Method in class org.rcsb.cif.binary.data.Float32Array

getType() - Method in class org.rcsb.cif.binary.data.Float64Array

getType() - Method in class org.rcsb.cif.binary.data.Int16Array

getType() - Method in class org.rcsb.cif.binary.data.Int32Array

getType() - Method in class org.rcsb.cif.binary.data.Int8Array

getType() - Method in interface org.rcsb.cif.binary.data.NumberArray

Report the type of this number array.

getType() - Method in class org.rcsb.cif.binary.data.Uint16Array

getType() - Method in class org.rcsb.cif.binary.data.Uint32Array

getType() - Method in class org.rcsb.cif.binary.data.Uint8Array

getType() - Method in class org.rcsb.cif.schema.core.ChemicalConnBond

Code for the chemical bond type.

getType() - Method in class org.rcsb.cif.schema.core.DiffrnDetector

The make, model or name of the diffraction radiation detector.

getType() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

Description of orientation matrix and how it should be applied to define the orientation of the crystal with respect to the diffractometer axes.

getType() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Details of the radiation source or energy spectrum.

getType() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Description of the make, model or name of the source device.

getType() - Method in class org.rcsb.cif.schema.core.JournalIndex

Type of index assigned for the publication.

getType() - Method in class org.rcsb.cif.schema.mm.ChemComp

For standard polymer components, the type of the monomer.

getType() - Method in class org.rcsb.cif.schema.mm.ChemicalConnBond

The chemical bond type associated with the connection between the two sites _chemical_conn_bond.atom_1 and _chemical_conn_bond.atom_2.

getType() - Method in class org.rcsb.cif.schema.mm.DatabasePDBRevRecord

The types of records that were changed in this revision to a PDB entry.

getType() - Method in class org.rcsb.cif.schema.mm.DiffrnDetector

The make, model or name of the detector device used.

getType() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

A description of the orientation matrix type and how it should be applied to define the orientation of the crystal precisely with respect to the diffractometer axes.

getType() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The nature of the radiation.

getType() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The make, model or name of the source of radiation.

getType() - Method in class org.rcsb.cif.schema.mm.EmCtfCorrection

Type of CTF correction applied

getType() - Method in class org.rcsb.cif.schema.mm.EmDetector

The detector type used for recording images.

getType() - Method in class org.rcsb.cif.schema.mm.EmEntityAssembly

A description of types of components of the assembly of the biological structure.

getType() - Method in class org.rcsb.cif.schema.mm.EmEulerAngleAssignment

The procedure used to assigned euler angles.

getType() - Method in class org.rcsb.cif.schema.mm.EmFinalClassification

Space (2D/3D) for the classification.

getType() - Method in class org.rcsb.cif.schema.mm.EmGridPretreatment

Type of grid pretreatment

getType() - Method in class org.rcsb.cif.schema.mm.EmMap

map format

getType() - Method in class org.rcsb.cif.schema.mm.EmStaining

type of staining

getType() - Method in class org.rcsb.cif.schema.mm.EmStartModel

Type of startup model (map density) used to initiate the reconstruction

getType() - Method in class org.rcsb.cif.schema.mm.Entity

Defines the type of the entity.

getType() - Method in class org.rcsb.cif.schema.mm.EntityPoly

The type of the polymer.

getType() - Method in class org.rcsb.cif.schema.mm.IhmModelingPostProcess

The type of post modeling analysis being carried out.

getType() - Method in class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

The type of classifier.

getType() - Method in class org.rcsb.cif.schema.mm.JournalIndex

Journal index data items are defined by the journal staff.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

A type classification of the revision

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

This data item contains the chemical component type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

This data item contains the descriptor type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

The component feature type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

This data item contains the identifier type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelDescriptor

This data item contains the descriptor type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompNonstandard

This data item describes modification type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

Defines the type of the entity.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

The chemical or structural type of the interaction.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

The type of this synonym.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxConnect

Approximately corresponds to _chem_comp.type

getType() - Method in class org.rcsb.cif.schema.mm.PdbxConstruct

The type of nucleic acid sequence in the construct.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxConstructFeature

The type of the feature

getType() - Method in class org.rcsb.cif.schema.mm.PdbxCoordinateModel

A classification of the composition of the coordinate model.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntityFeatures

A flag to indicate the molecule class for the entity.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranch

The type of this branched oligosaccharide.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

This data item contains the descriptor type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

This data item describes the functional type of the protein oligonucleotide binding interaction.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncEnzyme

This data item describes the type of enzyme function.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncOther

This data item describes the type of structural function.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncRegulatory

This data item describes the type of regulatory function.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityFuncStructural

This data item describes the type of structural function.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyNaType

This data item describes the nucleic acid type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntity

Defines the structural classification of this molecule.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

Defines the structural classification of the molecule.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

Defines the structural classification of the molecule.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrExptl

The type of NMR experiment.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

A descriptive term for the sample that defines the general physical properties of the sample.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

Select the instrument manufacturer(s) and the model(s) of the NMR(s) used for this work.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

The kind of chemical shift offset that should be applied to all chemical shifts observed for a specific type of atom.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

Defines the polymer characteristic of the entity.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

The type of the polymer.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

The monomer type for the sequence.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Defines the structural classification of the entity.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

Type of annotation for this entity.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The entity feature type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

The the type of restraint applied to the domain specified by _pdbx_refine_ls_restr_ncs.dom_id and in the domains against which it was restrained.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxReflnsTwin

There are two types of twinning: merohedral or hemihedral non-merohedral or epitaxial For merohedral twinning the diffraction patterns from the different domains are completely superimposable.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxRobotSystem

The type of robotic system used for in the production pathway.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxSolnScatter

The type of solution scattering experiment carried out

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

The property type for the assembly.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

The property type for the assembly.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

A classification of the diagnostic for the chemical component instance

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

A classification of the annotation for the chemical component instance

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructGroupList

A selected list of group types.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructInfo

The information category/type for this item.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructLink

The chemical or structural type of the interaction.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

A code to indicate the type of operator.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

A code to indicate the type of operator.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

A classification of the feature

getType() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

Property type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table type.

getType() - Method in class org.rcsb.cif.schema.mm.PdbxValidatePlanes

The type of plane - MAIN CHAIN or SIDE CHAIN atoms

getType() - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

The type of the function being minimized.

getType() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

The type of the parameter being restrained.

getType() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrType

This data item is a pointer to _refine_ls_restr.type in the REFINE_LS_RESTR category.

getType() - Method in class org.rcsb.cif.schema.mm.Software

The classification of the software according to the most common types.

getType() - Method in class org.rcsb.cif.schema.mm.StructSheet

A simple descriptor for the type of the sheet.

getTypeComp1() - Method in class org.rcsb.cif.schema.mm.ChemCompLink

The type of the first of the two components joined by the link.

getTypeComp2() - Method in class org.rcsb.cif.schema.mm.ChemCompLink

The type of the second of the two components joined by the link.

getTypedBlock(Block) - Method in class org.rcsb.cif.schema.core.CifCoreFile

getTypedBlock(Block) - Method in class org.rcsb.cif.schema.DelegatingCifFile

getTypedBlock(Block) - Method in class org.rcsb.cif.schema.mm.MmCifFile

getTypeDetails() - Method in class org.rcsb.cif.schema.mm.EntityPoly

A description of special aspects of the polymer type.

getTypeEvidenceCode() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

Evidence for the assignment of _pdbx_reference_molecule.type

getTypeSymbol() - Method in class org.rcsb.cif.schema.core.AtomSite

A code to identify the atom specie(s) occupying this site.

getTypeSymbol() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

This _atom_type.symbol code links the anisotropic atom parameters to the atom type data associated with this site and must match one of the _atom_type.symbol codes in this list.

getTypeSymbol() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

This _atom_type.symbol code links the anisotropic atom parameters to the atom type data associated with this site and must match one of the _atom_type.symbol codes in this list.

getTypeSymbol() - Method in class org.rcsb.cif.schema.core.ChemicalConnAtom

A code identifying the atom type.

getTypeSymbol() - Method in class org.rcsb.cif.schema.core.ModelSite

Code to identify the atom specie(s) occupying this site.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.AtomSite

This data item is a pointer to _atom_type.symbol in the ATOM_TYPE category.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

This data item is a pointer to _atom_type.symbol in the ATOM_TYPE category.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.ChemCompAtom

The code used to identify the atom species representing this atom type.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.ChemicalConnAtom

This data item is a pointer to _atom_type.symbol in the ATOM_TYPE category.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.IhmStartingModelCoord

The atom type symbol(element symbol) corresponding to this coordinate position.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

This data item is a pointer to _atom_type.symbol in the ATOM_TYPE category.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

The code used to identify the atom species representing this atom type.

getTypeSymbol() - Method in class org.rcsb.cif.schema.mm.PdbxConnectAtom

Element symbol

getU11() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU11() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU11() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU11() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU11Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU11Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU11Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU11Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU11Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU11Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU12() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU12() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU12() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU12() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU12Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU12Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU12Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU12Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU12Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU12Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU13() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU13() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU13() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU13() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU13Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU13Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU13Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU13Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU13Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU13Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU22() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU22() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU22() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU22() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU22Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU22Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU22Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU22Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU22Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU22Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU23() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU23() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU23() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU23() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU23Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU23Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU23Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU23Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU23Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU23Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU33() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU33() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU33() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard anisotropic atomic displacement components in angstroms squared which appear in the structure factor term: T = exp{-2pi^2^ sum~i~ [sum~j~ (U^ij^ h~i~ h~j~ a*~i~ a*~j~) ] } h = the Miller indices a* = the reciprocal-space cell lengths The unique elements of the real symmetric matrix are entered by row.

getU33() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The elements of the standard anisotropic atomic displacement matrix U, which appears in the structure-factor term as: T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]} h = the Miller indices a* = the reciprocal space cell lengths These matrix elements may appear with atomic coordinates in the ATOM_SITE category, or they may appear in the separate ATOM_SITE_ANISOTROP category, but they may not appear in both places.

getU33Esd() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU33Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU33Esd() - Method in class org.rcsb.cif.schema.core.AtomSiteAnisotrop

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU33Esd() - Method in class org.rcsb.cif.schema.mm.AtomSiteAnisotrop

The standard uncertainty (estimated standard deviation) of _atom_site_anisotrop.U.

getU33Su() - Method in class org.rcsb.cif.schema.core.AtomSite

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getU33Su() - Method in class org.rcsb.cif.schema.core.AtomSiteAniso

These are the standard uncertainty values (SU) for the standard form of the Uij anisotropic atomic displacement components (see _aniso_UIJ.

getUB11() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB11() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB12() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB12() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB13() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB13() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB21() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB21() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB22() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB22() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB23() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB23() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB31() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB31() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB32() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB32() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUB33() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The set of data items which specify the elements of the matrix of the orientation of the crystal axes to the diffractometer goniometer.

getUB33() - Method in class org.rcsb.cif.schema.mm.DiffrnOrientMatrix

The elements of the 3x3 matrix that defines the dimensions of the reciprocal cell and its orientation with respect to the local diffractometer axes.

getUBIJ() - Method in class org.rcsb.cif.schema.core.DiffrnOrientMatrix

The 3x3 matrix specifying the orientation of the crystal with respect to the diffractometer axes.

getUEquivGeomMean() - Method in class org.rcsb.cif.schema.core.AtomSite

Equivalent isotropic atomic displacement parameter, U(equiv), in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getUEquivGeomMean() - Method in class org.rcsb.cif.schema.mm.AtomSite

Equivalent isotropic atomic displacement parameter, U~eq~, in angstroms squared, calculated as the geometric mean of the anisotropic atomic displacement parameters.

getUEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values (esds) of the U(equiv).

getUEquivGeomMeanEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.U_equiv_geom_mean.

getUEquivGeomMeanSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values (esds) of the U(equiv).

getUIsoOrEquiv() - Method in class org.rcsb.cif.schema.core.AtomSite

Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, U(equiv), in angstroms squared, calculated from anisotropic atomic displacement parameters.

getUIsoOrEquiv() - Method in class org.rcsb.cif.schema.mm.AtomSite

Isotropic atomic displacement parameter, or equivalent isotropic atomic displacement parameter, U~eq~, calculated from anisotropic atomic displacement parameters.

getUIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values (esds) of the U(iso) or U(equiv).

getUIsoOrEquivEsd() - Method in class org.rcsb.cif.schema.mm.AtomSite

The standard uncertainty (estimated standard deviation) of _atom_site.U_iso_or_equiv.

getUIsoOrEquivSu() - Method in class org.rcsb.cif.schema.core.AtomSite

Standard uncertainty values (esds) of the U(iso) or U(equiv).

getUnderSamplingType() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

The type of spectral folding/aliasing that was used or occurred when the spectrum was collected.

getUnitCell() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The unit cell parameters (a b c alpha beta gamma) separated by a space.

getUnits() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

Molecular weight units.

getUnpublishedFlag() - Method in class org.rcsb.cif.schema.mm.Citation

Flag to indicate that this citation will not be published.

getUpdateRecord() - Method in class org.rcsb.cif.schema.core.Audit

A description of the revision applied to the data.

getUpdateRecord() - Method in class org.rcsb.cif.schema.mm.Audit

A record of any changes to the data block.

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.EmFigureDepositorInfo

The name of the image file associated with the map entry

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.EmLayerLinesDepositorInfo

The name of the layer line file associated with the map entry

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

The name of a file containing the map.

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

The name of a file containing the map.

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.EmStructureFactorsDepositorInfo

The name of the structure factor file associated with the map entry

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

The name of the uploaded file containing information about this component.

getUploadFileName() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

The name of a file containing matrix records.

getUploadFileType() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

The type of the uploaded file containing information about this component.

getUploadFormat() - Method in class org.rcsb.cif.schema.mm.EmMapDepositorInfo

map format

getUploadFormat() - Method in class org.rcsb.cif.schema.mm.EmMaskDepositorInfo

map format

getUpperLimit() - Method in class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

The upper bond distance limit.

getUsedFramesPerImage() - Method in class org.rcsb.cif.schema.mm.EmImageScans

Range of time-slice (movie) frames used for the reconstruction.

getUseSasRefine() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

A flag to indicate whether related SAXS/SANS data were used in refinement

getUTls11() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getUTls12() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getUTls13() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getUTls22() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getUTls23() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getUTls33() - Method in class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

The elements of the TLS contribution to the atomic displacement matrix U.

getVal() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

Chemical shift value that has been applied to all of the reported chemical shifts to bring their values in line with values expected to be observed for the chemical shift referencing that was used.

getValence() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of items used to specify bond valence parameters used to calculate bond valences from bond lengths.

getValence() - Method in class org.rcsb.cif.schema.core.GeomBond

Bond valence calculated from the bond distance.

getValence() - Method in class org.rcsb.cif.schema.mm.GeomBond

The bond valence calculated from _geom_bond.dist.

getValenceParam() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of items for listing bond valences.

getValenceParam() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the VALENCE_PARAM category define the parameters used for calculating bond valences from bond lengths.

getValenceRef() - Method in class org.rcsb.cif.schema.core.CifCoreBlock

The CATEGORY of items for listing valence references.

getValenceRef() - Method in class org.rcsb.cif.schema.mm.MmCifBlock

Data items in the VALENCE_REF category list the references from which the bond-valence parameters have been taken.

getValErr() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

Error in the reported chemical shift offset value used.

getValidatedContactEmail() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The validated contact e-mail address for the correponding depositor.

getValidatedModelFileName() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

The the last validation report operation, the name of the model file last validated.

getValidationNumber() - Method in class org.rcsb.cif.schema.core.Journal

Data validation number assigned to journal.

getValidFlag() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiUpload

A flag to indicate if the uploaded data is satisfies a preliminary validation criteria.

getValue() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Wavelength of radiation used in diffraction measurements.

getValue() - Method in class org.rcsb.cif.schema.core.GeomAngle

Angle defined by the atoms located at atom_site_x/site_symmetry_x for x = 1,2,3.

getValue() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Angle defined by the sites identified by _geom_torsion.id.

getValue() - Method in class org.rcsb.cif.schema.mm.EmEntityAssemblyMolwt

The molecular weight of the assembly component.

getValue() - Method in class org.rcsb.cif.schema.mm.GeomAngle

Angle in degrees defined by the three sites _geom_angle.atom_site_id_1, _geom_angle.atom_site_id_2 and _geom_angle.atom_site_id_3.

getValue() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The value of the torsion angle in degrees.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompFeature

The component feature value.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

The value of the parameter

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

The entity feature value.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

The value of the assembly property.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

The value of the assembly property.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

Angle in degrees defined by the three sites _pdbx_struct_conn_angle.ptnr1_label_atom_id, _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_atom_id

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructInfo

The value of this information item.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

Property value.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

Angle in degrees bounded by the three sites _pdbx_virtual_angle.atom_site_id_1, _pdbx_virtual_angle.atom_site_id_2 and _pdbx_virtual_angle.atom_site_id_3.

getValue() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The value of the torsion angle in degrees.

getValue() - Method in class org.rcsb.cif.schema.mm.RefineBIso

The value of the isotropic B factor (displacement parameter) assigned to a class of atoms defined in _refine_B_iso.class.

getValue() - Method in class org.rcsb.cif.schema.mm.RefineOccupancy

The value of occupancy assigned to a class of atoms defined in _refine_occupancy.class.

getValueAngle() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The value that should be taken as the target value for the angle associated with the specified atoms, expressed in degrees.

getValueAngle() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The value that should be taken as the target value for the angle associated with the specified atoms, expressed in degrees.

getValueAngleEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The standard uncertainty (estimated standard deviation) of _chem_comp_angle.value_angle.

getValueAngleEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The standard uncertainty (estimated standard deviation) of _chem_link_angle.value_angle.

getValueDist() - Method in class org.rcsb.cif.schema.core.ChemCompBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a distance.

getValueDist() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The value that should be taken as the target value for the angle associated with the specified atoms, expressed as the distance between the atoms specified by _chem_comp_angle.atom_id_1 and _chem_comp_angle.atom_id_3.

getValueDist() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a distance.

getValueDist() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The value that should be taken as the target value for the angle associated with the specified atoms, expressed as the distance between the atoms specified by _chem_comp_angle.atom_id_1 and _chem_comp_angle.atom_id_3.

getValueDist() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a distance.

getValueDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompAngle

The standard uncertainty (estimated standard deviation) of _chem_comp_angle.value_dist.

getValueDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

The standard uncertainty (estimated standard deviation) of _chem_comp_bond.value_dist.

getValueDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkAngle

The standard uncertainty (estimated standard deviation) of _chem_comp_angle.value_dist.

getValueDistEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

The standard uncertainty (estimated standard deviation) of _chem_link_bond.value_dist.

getValueEsd() - Method in class org.rcsb.cif.schema.core.GeomAngle

Standard Uncertainty of the angle defined by the sites identified by _geom_angle.id

getValueEsd() - Method in class org.rcsb.cif.schema.core.GeomTorsion

Standard Uncertainty of the torsion angle.

getValueEsd() - Method in class org.rcsb.cif.schema.mm.GeomAngle

The standard uncertainty (estimated standard deviation) of _geom_angle.value.

getValueEsd() - Method in class org.rcsb.cif.schema.mm.GeomTorsion

The standard uncertainty (estimated standard deviation) of _geom_torsion.value.

getValueEsd() - Method in class org.rcsb.cif.schema.mm.PdbxStructConnAngle

The standard uncertainty (estimated standard deviation) of _pdbx_struct_conn_angle.value

getValueEsd() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualAngle

The estimated standard deviation of _pdbx_virtual_angle.value.

getValueEsd() - Method in class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

The estimated standard deviation of _pdbx_virtual_torsion.value.

getValueKind(int) - Method in class org.rcsb.cif.model.binary.BinaryColumn

getValueKind(int) - Method in class org.rcsb.cif.model.Column.EmptyColumn

getValueKind(int) - Method in interface org.rcsb.cif.model.Column

States the ValueKind for a particular row.

getValueKind(int) - Method in class org.rcsb.cif.model.text.TextColumn

getValueKind(int) - Method in class org.rcsb.cif.schema.DelegatingColumn

getValueOrder() - Method in class org.rcsb.cif.schema.core.ChemCompBond

Code for the chemical bond type.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.ChemCompBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a bond order.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.ChemLinkBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a bond order.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

The value that should be taken as the target for the chemical bond associated with the specified atoms, expressed as a bond order.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

The bond order target for the chemical linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

The bond order target for the chemical linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

The bond order target for the chemical linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

The bond order target for the chemical linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

The bond order target for the non-standard linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

The bond order target for the chemical linkage.

getValueOrder() - Method in class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

The bond order target for the chemical linkage.

getValues() - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

getValues() - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

getValues() - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

getValues() - Method in interface org.rcsb.cif.model.FloatColumnBuilder

Access to all stored values.

getValues() - Method in interface org.rcsb.cif.model.IntColumnBuilder

Access to all stored values.

getValues() - Method in interface org.rcsb.cif.model.StrColumnBuilder

Access to all stored values.

getValueSu() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Standard uncertainty of the wavelength of radiation used in diffraction measurements.

getValueSu() - Method in class org.rcsb.cif.schema.core.GeomAngle

Standard Uncertainty of the angle defined by the sites identified by _geom_angle.id

getVec1() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec1() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec1() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getVec2() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec2() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec2() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getVec3() - Method in class org.rcsb.cif.schema.core.AtomSites

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec3() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

Matrix used to transform fractional coordinates in the ATOM_SITE category to Cartesian coordinates.

getVec3() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

Matrix used to transform Cartesian coordinates in the ATOM_SITE category to fractional coordinates.

getVector() - Method in class org.rcsb.cif.schema.core.AtomSitesCartnTransform

The 3x1 translation is used with _atom_sites_Cartn_transform.matrix used to transform fractional coordinates to Cartesian coordinates.

getVector() - Method in class org.rcsb.cif.schema.core.AtomSitesFractTransform

The 3x1 translation is used with _atom_sites_fract_transform.matrix used to transform Cartesian coordinates to fractional coordinates.

getVector1() - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

The elements of the PDB TVECT vector.

getVector1() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the three-element vector component of the transformation operation.

getVector1() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the three-element vector component of the transformation operation.

getVector1() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the three-element vector component of the transformation operation.

getVector1() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the three-element vector component of a noncrystallographic symmetry operation.

getVector2() - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

The elements of the PDB TVECT vector.

getVector2() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the three-element vector component of the transformation operation.

getVector2() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the three-element vector component of the transformation operation.

getVector2() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the three-element vector component of the transformation operation.

getVector2() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the three-element vector component of a noncrystallographic symmetry operation.

getVector3() - Method in class org.rcsb.cif.schema.mm.DatabasePDBTvect

The elements of the PDB TVECT vector.

getVector3() - Method in class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

The elements of the three-element vector component of the transformation operation.

getVector3() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperList

The elements of the three-element vector component of the transformation operation.

getVector3() - Method in class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

The elements of the three-element vector component of the transformation operation.

getVector3() - Method in class org.rcsb.cif.schema.mm.StructNcsOper

The elements of the three-element vector component of a noncrystallographic symmetry operation.

getVectorA() - Method in class org.rcsb.cif.schema.core.Cell

The cell vector along the x axis.

getVectorB() - Method in class org.rcsb.cif.schema.core.Cell

The cell vector along the y axis.

getVectorC() - Method in class org.rcsb.cif.schema.core.Cell

The cell vector along the z axis.

getVectorDetails() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

Details of any modifications made to the named vector.

getVectorName() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The name of the vector used in this cloning step.

getVectorType() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

Identifies the type of vector used (plasmid, virus, or cosmid) in the expression system.

getVelocityHorizontal() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Velocity of sample horizontally relative to a perpendicular beam in millimetres/second

getVelocityVertical() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

Velocity of sample vertically relative to a perpendicular beam in millimetres/second

getVerificationMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

The method used to verify that the incorporated gene is correct

getVersion() - Method in class org.rcsb.cif.model.binary.BinaryFile

Reports the encoder version that was used to create this file.

getVersion() - Method in class org.rcsb.cif.schema.mm.EmSoftware

The version of the software.

getVersion() - Method in class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

Version of the database entry, if the database allows versioning.

getVersion() - Method in class org.rcsb.cif.schema.mm.PdbxNmrSoftware

The version of the software.

getVersion() - Method in class org.rcsb.cif.schema.mm.Software

The version of the software.

getVersionId() - Method in class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

The version identifier of the referenced data file.

getVersusStolList() - Method in class org.rcsb.cif.schema.core.AtomType

List of scattering factors as a function of sin theta on lambda.

getVersusStolList() - Method in class org.rcsb.cif.schema.core.AtomTypeScat

List of scattering factors as a function of sin theta on lambda.

getViewGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxViewCategory

A pointer to the view_group_id in the PDBX_VIEW_CATEGORY_GROUP category.

getViewGroupId() - Method in class org.rcsb.cif.schema.mm.PdbxViewCategoryGroup

The identifier for a collection of related mmCIF categories.

getVirusHostCategory() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The host category description for the virus.

getVirusHostGrowthCell() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The host cell from which the virus was isolated.

getVirusHostSpecies() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The host species from which the virus was isolated.

getVirusIsolate() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The isolate from which the virus was obtained.

getVirusType() - Method in class org.rcsb.cif.schema.mm.EmVirusEntity

The type of virus.

getVitrificationApplied() - Method in class org.rcsb.cif.schema.mm.EmSpecimen

'YES' indicates that the specimen was vitrified by cryopreservation.

getVoltage() - Method in class org.rcsb.cif.schema.core.DiffrnSource

Generator voltage at which the radiation source device was operated.

getVoltage() - Method in class org.rcsb.cif.schema.mm.DiffrnSource

The voltage in kilovolts at which the radiation source was operated.

getVoltage() - Method in class org.rcsb.cif.schema.mm.EmFocusedIonBeam

Voltage applied to the ion source, in kilovolts

getVolume() - Method in class org.rcsb.cif.schema.core.Cell

Volume of the crystal unit cell.

getVolume() - Method in class org.rcsb.cif.schema.core.Journal

Volume number of the publication.

getVolume() - Method in class org.rcsb.cif.schema.mm.Cell

Cell volume V in angstroms cubed.

getVolume() - Method in class org.rcsb.cif.schema.mm.ExptlCrystalGrowComp

The volume of the solution component.

getVolume() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getVolume() - Method in class org.rcsb.cif.schema.mm.PdbxBufferComponents

The volume of buffer component.

getVolume() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

Unit cell volume.

getVolume() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

The volume of the solution.

getVolume3() - Method in class org.rcsb.cif.schema.mm.PdbxStereochemistry

Chiral volume in degrees.

getVolumeEsd() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the volume of the crystal unit cell.

getVolumeEsd() - Method in class org.rcsb.cif.schema.mm.Cell

The standard uncertainty (estimated standard deviation) of _cell.volume.

getVolumeFlag() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

A flag to indicate whether a chiral volume should match the standard value in both magnitude and sign, or in magnitude only.

getVolumeFlag() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

A flag to indicate whether a chiral volume should match the standard value in both magnitude and sign, or in magnitude only.

getVolumePooledFractions() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The total volume of all the fractions pooled to give the purified protein solution.

getVolumeSu() - Method in class org.rcsb.cif.schema.core.Cell

Standard uncertainty of the volume of the crystal unit cell.

getVolumeThree() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The chiral volume, V~c~, for chiral centres that involve a chiral atom bonded to three non-hydrogen atoms and one hydrogen atom.

getVolumeThree() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The chiral volume, V(c), for chiral centres that involve a chiral atom bonded to three non-hydrogen atoms and one hydrogen atom.

getVolumeThreeEsd() - Method in class org.rcsb.cif.schema.mm.ChemCompChir

The standard uncertainty (estimated standard deviation) of _chem_comp_chir.volume_three.

getVolumeThreeEsd() - Method in class org.rcsb.cif.schema.mm.ChemLinkChir

The standard uncertainty (estimated standard deviation) of _chem_link_chir.volume_three.

getVolumeUnits() - Method in class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

The volume units of the solution.

getWavelength() - Method in class org.rcsb.cif.schema.core.CellMeasurement

Wavelength of the radiation used to measure the unit cell.

getWavelength() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Wavelength of radiation used in diffraction measurements.

getWavelength() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Mean wavelength of radiation used to measure this intensity.

getWavelength() - Method in class org.rcsb.cif.schema.core.Refln

The mean wavelength in angstroms of radiation used to measure this reflection.

getWavelength() - Method in class org.rcsb.cif.schema.mm.CellMeasurement

The wavelength in angstroms of the radiation used to measure the unit cell.

getWavelength() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiationWavelength

The radiation wavelength in angstroms.

getWavelength() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

The mean wavelength in angstroms of the radiation used to measure the intensity of this reflection.

getWavelength() - Method in class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

The wavelength of data collection.

getWavelength() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The wavelength reported from the model file.

getWavelength() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

The wavelength at which this data set was measured.

getWavelength() - Method in class org.rcsb.cif.schema.mm.Refln

The mean wavelength in angstroms of radiation used to measure this reflection.

getWavelength1() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.

getWavelength2() - Method in class org.rcsb.cif.schema.mm.PhasingMADRatio

This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.

getWavelengthDetails() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Information about the determination of the radiation diffrn_radiation_wavelength that is not conveyed completely by an enumerated value of _diffrn_radiation_wavelength.determination.

getWavelengthDetails() - Method in class org.rcsb.cif.schema.mm.PhasingMADSet

A descriptor for this wavelength in this cluster of data sets.

getWavelengthDetermination() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Method by which the radiation wavelength was determined.

getWavelengthId() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

Code identifying a radiation used in the diffraction measurements.

getWavelengthId() - Method in class org.rcsb.cif.schema.core.DiffrnRefln

Code identifying the wavelength in the diffrn_radiation_wavelength list.

getWavelengthId() - Method in class org.rcsb.cif.schema.core.Refln

Code identifying the wavelength in DIFFRN_RADIATION_WAVELENGTH list.

getWavelengthId() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

This data item is a pointer to _diffrn_radiation_wavelength.id in the DIFFRN_RADIATION_WAVELENGTH category.

getWavelengthId() - Method in class org.rcsb.cif.schema.mm.DiffrnRefln

This data item is a pointer to _diffrn_radiation.wavelength_id in the DIFFRN_RADIATION category.

getWavelengthId() - Method in class org.rcsb.cif.schema.mm.Refln

This data item is a pointer to _diffrn_radiation.wavelength_id in the DIFFRN_RADIATION category.

getWavelengthSu() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Standard uncertainty of the wavelength of radiation used in diffraction measurements.

getWeight() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Mass corresponding to the formulae _chemical_formula.structural, *_iupac, *_moiety or *_sum and, together with the Z value and cell parameters yield the density given as _exptl_crystal.density_diffrn.

getWeight() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

Formula mass in daltons.

getWeight() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

The weight of the gaussian object.

getWeight() - Method in class org.rcsb.cif.schema.mm.IhmGaussianObjSite

The weight of the gaussian object.

getWeight() - Method in class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

The value of the weighting coefficient used in non-crystalographic restaint in the domain specified by _pdbx_refine_ls_restr_ncs.dom_id to equivalent atomic positions in the domains against which it was restrained.

getWeight() - Method in class org.rcsb.cif.schema.mm.RefineFunctMinimized

The weight applied to this term of the function that was minimized during the refinement.

getWeight() - Method in class org.rcsb.cif.schema.mm.RefineLsRestr

The weighting value applied to this type of restraint in the least-squares refinement.

getWeightBIso() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

The value of the weighting coefficient used in noncrystallographic symmetry restraint of isotropic displacement parameters in the domain specified by _refine_ls_restr_ncs.dom_id to equivalent isotropic displacement parameters in the domains against which it was restrained.

getWeightedRealSpaceR() - Method in class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

The weighted Real Space Rfactor (RSR/RSCC) for the residue.

getWeightedRSR() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The weighted Real Space Rfactor (defined as RSR/RSCC) for the residue.

getWeightedRSRZ() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of weighted Real Space Rfactor for the residue.

getWeightingDetails() - Method in class org.rcsb.cif.schema.core.Refine

Description of special aspects of the weighting scheme used in the least-squares refinement.

getWeightingDetails() - Method in class org.rcsb.cif.schema.core.RefineLs

Description of special aspects of the weighting scheme used in the least-squares refinement.

getWeightingScheme() - Method in class org.rcsb.cif.schema.core.Refine

General description of the weighting scheme used in the least-squares.

getWeightingScheme() - Method in class org.rcsb.cif.schema.core.RefineLs

General description of the weighting scheme used in the least-squares.

getWeightMeas() - Method in class org.rcsb.cif.schema.core.ChemicalFormula

Formula mass measured by a non-diffraction experiment.

getWeightMeas() - Method in class org.rcsb.cif.schema.mm.ChemicalFormula

Formula mass in daltons measured by a non-diffraction experiment.

getWeightPosition() - Method in class org.rcsb.cif.schema.mm.RefineLsRestrNcs

The value of the weighting coefficient used in noncrystallographic symmetry restraint of atom positions in the domain specified by _refine_ls_restr_ncs.dom_id to equivalent atom positions in the domains against which it was restrained.

getWorkingSetCount() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

The number of unique reflections for refinement (working set) reported in the model file.

getWRFactorAll() - Method in class org.rcsb.cif.schema.core.Refine

Weighted residual factors for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getWRFactorAll() - Method in class org.rcsb.cif.schema.core.RefineLs

Weighted residual factors for all reflections satisfying the resolution limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getWRFactorAll() - Method in class org.rcsb.cif.schema.core.RefineLsClass

Weight residual for all reflections in this class judged significantly intense (see _reflns.threshold_expression) and included in refinement.

getWRFactorAll() - Method in class org.rcsb.cif.schema.core.ReflnsClass

For each reflection class, the weighted residual factors for all reflections included in the refinement.

getWRFactorAll() - Method in class org.rcsb.cif.schema.mm.RefineLsClass

For each reflection class, the weighted residual factor for all reflections included in the refinement.

getWRFactorAll() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low.

getWRFactorAll() - Method in class org.rcsb.cif.schema.mm.ReflnsClass

For each reflection class, the weighted residual factors for all reflections included in the refinement.

getWRFactorGt() - Method in class org.rcsb.cif.schema.core.Refine

Weighted residual factors for significantly intense reflections (satisfying _reflns.threshold_expression) included in the refinement.

getWRFactorGt() - Method in class org.rcsb.cif.schema.core.RefineLs

Weighted residual factors for significantly intense reflections (satisfying _reflns.threshold_expression) included in the refinement.

getWRFactorObs() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation criterion established by _reflns.observed_criterion.

getWRFactorRef() - Method in class org.rcsb.cif.schema.core.RefineLs

Weighted residual factors for reflections included in the refinement which satisfy the limits specified by _refine_ls.d_res_high and _refine_ls.d_res_low.

getWRFactorRFree() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the test reflections (i.e.

getWRFactorRWork() - Method in class org.rcsb.cif.schema.mm.RefineLsShell

Weighted residual factor wR for reflections that satisfy the resolution limits established by _refine_ls_shell.d_res_high and _refine_ls_shell.d_res_low and the observation limit established by _reflns.observed_criterion, and that were used as the working reflections (i.e.

getWRSRMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The weighted Real Space Rfactor (RSR/RSCC) for the main chain atoms.

getWRSRPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The weighted Real Space Rfactor (RSR/RSCC) for the phosphate atoms.

getWRSRSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

The weighted Real Space Rfactor (RSR/RSCC) for the side chain atoms.

getWRSRZMainChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of weighted Real Space Rfactor (RSR/RSCC) for the main chain atoms.

getWRSRZPhosphateGroup() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of weighted Real Space Rfactor (RSR/RSCC) for the phosphate atoms.

getWRSRZSideChain() - Method in class org.rcsb.cif.schema.mm.PdbxDccMap

Zscore of weighted Real Space Rfactor (RSR/RSCC) for the side chain atoms.

getWt() - Method in class org.rcsb.cif.schema.core.DiffrnRadiationWavelength

Relative intensity of a radiation used in the diffraction measurements.

getWt() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiationWavelength

The relative weight of a wavelength identified by the code _diffrn_radiation_wavelength.id in the list of wavelengths.

getWwpdbSiteId() - Method in class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

The wwPDB internal site configuration identifier.

getWWWReportCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column visibility in WWW reports queries.

getWWWReportCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table visibility in WWW reports queries.

getWWWSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxColumninfo

SQL column visibility in WWW selection querires.

getWWWSelectionCriteria() - Method in class org.rcsb.cif.schema.mm.PdbxTableinfo

SQL table visibility in WWW selection querires.

getWyckoffSymbol() - Method in class org.rcsb.cif.schema.core.AtomSite

The Wyckoff symbol (letter) as listed in the space-group section of International Tables for Crystallography, Vol.

getWyckoffSymbol() - Method in class org.rcsb.cif.schema.mm.AtomSite

The Wyckoff symbol (letter) as listed in the space-group tables of International Tables for Crystallography, Vol.

getXbeam() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Distance (mm) from the edge of data to beam spot (in X direction).

getXbeamEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of xbeam (mm).

getXcoord() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

The x-coordinate of the center.

getXDisplacement() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step X displacement parameter.

getXfelPulseEvents() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For FEL experiments, the number of pulse events in the dataset.

getXfelPulseRepetitionRate() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

For FEL experiments, the pulse repetition rate measured in cycles per seconds.

getXfelRunNumbers() - Method in class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

For FEL experiments, in which data collection was performed in batches, indicates which subset of the data collected were used in producing this dataset.

getXraySymbol() - Method in class org.rcsb.cif.schema.core.DiffrnRadiation

IUPAC symbol for the X-ray wavelength for probe radiation.

getXraySymbol() - Method in class org.rcsb.cif.schema.mm.DiffrnRadiation

The IUPAC symbol for the X-ray wavelength for the probe radiation.

getXyz() - Method in class org.rcsb.cif.schema.core.SpaceGroupGenerator

A parsable string giving one of the symmetry generators of the space group in algebraic form.

getYbeam() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

Distance from (mm) the edge of data to beam spot (in Y direction).

getYbeamEsd() - Method in class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

The estimated deviation of ybeam (mm).

getYcoord() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

The y-coordinate of the center.

getYDisplacement() - Method in class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

The value of the base pair step Y displacement parameter.

getYear() - Method in class org.rcsb.cif.schema.core.Citation

Year of citation; relevant for articles and book chapters.

getYear() - Method in class org.rcsb.cif.schema.core.Journal

Year of the publication.

getYear() - Method in class org.rcsb.cif.schema.mm.Citation

The year of the citation; relevant for journal articles, books and book chapters.

getYear() - Method in class org.rcsb.cif.schema.mm.Journal

Journal data items are defined by the journal staff.

getYieldMethod() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The method used to determine the yield

getYieldPooledFractions() - Method in class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

The yield in milligrams of protein recovered in the pooled fractions.

getZ_score() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Z-scores are computed (by Xtriage) on the basis of a Bernoulli model assuming independence of weak reflections with respect to anisotropy.

getZcoord() - Method in class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

The z-coordinate of the center.

getZeta() - Method in class org.rcsb.cif.schema.mm.StructMonNucl

The value in degrees of the backbone torsion angle zeta (C3'-O3'-P-O5').

getZPDB() - Method in class org.rcsb.cif.schema.mm.Cell

The number of the polymeric chains in a unit cell.

getZScoreLTest() - Method in class org.rcsb.cif.schema.mm.PdbxDccDensity

Multivariate Z score for the L-test calculated by Xtriage using acentric reflections.

getZscoreRotation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

It is computed by comparing the LLG values from the rotation search with LLG values for a set of random rotations.

getZscoreTranslation() - Method in class org.rcsb.cif.schema.mm.PdbxPhasingMR

It is computed by comparing the LLG values from the translation search with LLG values for a set of random translations.

gzip(boolean) - Method in class org.rcsb.cif.CifOptions.CifOptionsBuilder

Allows for downstream GZIP operations.

H

hashCode() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

hasNextDecodingStep() - Method in interface org.rcsb.cif.binary.data.EncodedData

Convenience method to state whether the List returned by EncodedData.getEncoding() is not empty.

I

Ihm2demClassAverageFitting - Class in org.rcsb.cif.schema.mm

Data items in the IHM_2DEM_CLASS_AVERAGE_FITTING category records the details of the fitting of the model to the 2DEM class averages used in the IHM modeling.

Ihm2demClassAverageFitting(Category) - Constructor for class org.rcsb.cif.schema.mm.Ihm2demClassAverageFitting

Ihm2demClassAverageFittingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder

Ihm2demClassAverageRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_2DEM_CLASS_AVERAGE_RESTRAINT category records the details of the 2DEM class averages used in the IHM modeling.

Ihm2demClassAverageRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.Ihm2demClassAverageRestraint

Ihm2demClassAverageRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder

Ihm3demRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_3DEM_RESTRAINT category records the details of the 3DEM maps used as restraints in the IHM modeling.

Ihm3demRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.Ihm3demRestraint

Ihm3demRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.Ihm3demRestraintBuilder

IhmChemicalComponentDescriptor - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CHEMICAL_COMPONENT_DESCRIPTOR category records the details of the chemical descriptors of various non-polymeric chemical components (fluorescent probes, crosslinking agents etc.) used in the experiments.

IhmChemicalComponentDescriptor(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmChemicalComponentDescriptor

IhmChemicalComponentDescriptorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder

IhmCrossLinkList - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CROSS_LINK_LIST category records the list of spatial restraints derived from chemical crosslinking experiment.

IhmCrossLinkList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmCrossLinkList

IhmCrossLinkListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkListBuilder

IhmCrossLinkPseudoSite - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CROSS_LINK_PSEUDO_SITE category records the details of the pseudo sites involved in the cross links.

IhmCrossLinkPseudoSite(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmCrossLinkPseudoSite

IhmCrossLinkPseudoSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder

IhmCrossLinkRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CROSS_LINK_RESTRAINT category enumerates the implementation details of the chemical crosslinking restraints in the integrative modeling.

IhmCrossLinkRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmCrossLinkRestraint

IhmCrossLinkRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder

IhmCrossLinkResult - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CROSS_LINK_RESULT category records the results of the crosslinking restraints in the IHM modeling.

IhmCrossLinkResult(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmCrossLinkResult

IhmCrossLinkResultBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultBuilder

IhmCrossLinkResultParameters - Class in org.rcsb.cif.schema.mm

Data items in the IHM_CROSS_LINK_RESULT_PARAMETERS category records the results of the crosslinking restraint parameters in the IHM modeling.

IhmCrossLinkResultParameters(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmCrossLinkResultParameters

IhmCrossLinkResultParametersBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder

IhmDatasetExternalReference - Class in org.rcsb.cif.schema.mm

Category provides additional details regarding input data hosted externally at other resources.

IhmDatasetExternalReference(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDatasetExternalReference

IhmDatasetExternalReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder

IhmDatasetGroup - Class in org.rcsb.cif.schema.mm

Category to define groups or collections of input datasets.

IhmDatasetGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDatasetGroup

IhmDatasetGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupBuilder

IhmDatasetGroupLink - Class in org.rcsb.cif.schema.mm

IHM_DATASET_GROUP_LINK category provides the list of datasets present in a particular group.

IhmDatasetGroupLink(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDatasetGroupLink

IhmDatasetGroupLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetGroupLinkBuilder

IhmDatasetList - Class in org.rcsb.cif.schema.mm

Category holds the list of all datasets used in the IHM modeling.

IhmDatasetList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDatasetList

IhmDatasetListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetListBuilder

IhmDatasetRelatedDbReference - Class in org.rcsb.cif.schema.mm

Category holds information related to data sources for the entry.

IhmDatasetRelatedDbReference(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDatasetRelatedDbReference

IhmDatasetRelatedDbReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder

IhmDataTransformation - Class in org.rcsb.cif.schema.mm

Data items in the IHM_DATA_TRANSFORMATION category records the details of the rotation matrix and translation vector that can be applied to transform the data.

IhmDataTransformation(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDataTransformation

IhmDataTransformationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDataTransformationBuilder

IhmDerivedAngleRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_DERIVED_ANGLE_RESTRAINT category records the list of angle restraints used in the integrative modeling experiment.

IhmDerivedAngleRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDerivedAngleRestraint

IhmDerivedAngleRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder

IhmDerivedDihedralRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_DERIVED_DIHEDRAL_RESTRAINT category records the list of dihedral restraints used in the integrative modeling experiment.

IhmDerivedDihedralRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDerivedDihedralRestraint

IhmDerivedDihedralRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder

IhmDerivedDistanceRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_DERIVED_DISTANCE_RESTRAINT category records the list of distance restraints used in the integrative modeling experiment.

IhmDerivedDistanceRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmDerivedDistanceRestraint

IhmDerivedDistanceRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder

IhmEnsembleInfo - Class in org.rcsb.cif.schema.mm

Data items in the IHM_ENSEMBLE_INFO category records the details of the model clusters or ensembles obtained after sampling.

IhmEnsembleInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmEnsembleInfo

IhmEnsembleInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleInfoBuilder

IhmEnsembleSubSample - Class in org.rcsb.cif.schema.mm

Data items in the IHM_ENSEMBLE_SUB_SAMPLE category records the details of the sub samples within the ensembles.

IhmEnsembleSubSample(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmEnsembleSubSample

IhmEnsembleSubSampleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder

IhmEntityPolySegment - Class in org.rcsb.cif.schema.mm

Data items in the IHM_ENTITY_POLY_SEGMENT category identifies segments of polymeric entities.

IhmEntityPolySegment(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmEntityPolySegment

IhmEntityPolySegmentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEntityPolySegmentBuilder

IhmEprRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_EPR_RESTRAINT category records the details of the EPR data used as restraints in the IHM modeling.

IhmEprRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmEprRestraint

IhmEprRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmEprRestraintBuilder

IhmExternalFiles - Class in org.rcsb.cif.schema.mm

Category provides details regarding external files.

IhmExternalFiles(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmExternalFiles

IhmExternalFilesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalFilesBuilder

IhmExternalReferenceInfo - Class in org.rcsb.cif.schema.mm

Category holds links to other external data sources for the I/H model entry.

IhmExternalReferenceInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmExternalReferenceInfo

IhmExternalReferenceInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder

IhmFeatureList - Class in org.rcsb.cif.schema.mm

IHM_FEATURE_LIST is the high level category that provides defintions to select atoms/residues from polymeric and non-polymeric entities.

IhmFeatureList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmFeatureList

IhmFeatureListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmFeatureListBuilder

IhmGaussianObjEnsemble - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GAUSSIAN_OBJ_ENSEMBLE category records the details of the gaussian objects representing an ensemble or cluster of models.

IhmGaussianObjEnsemble(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGaussianObjEnsemble

IhmGaussianObjEnsembleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder

IhmGaussianObjSite - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GAUSSIAN_OBJ_SITE category records the details of the gaussian objects modeled in the integrative structural model.

IhmGaussianObjSite(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGaussianObjSite

IhmGaussianObjSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGaussianObjSiteBuilder

IhmGeometricObjectAxis - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_AXIS category records the details of an axis used in a spatial restraint.

IhmGeometricObjectAxis(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectAxis

IhmGeometricObjectAxisBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder

IhmGeometricObjectCenter - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_CENTER category records the center of geometric objects used as restraints in the integrative modeling study.

IhmGeometricObjectCenter(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectCenter

IhmGeometricObjectCenterBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder

IhmGeometricObjectDistanceRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_DISTANCE_RESTRAINT category records the details of distance restraints involving geometric objects.

IhmGeometricObjectDistanceRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectDistanceRestraint

IhmGeometricObjectDistanceRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder

IhmGeometricObjectHalfTorus - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_HALF_TORUS category records the parameters of half-torus that represents a membrane.

IhmGeometricObjectHalfTorus(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectHalfTorus

IhmGeometricObjectHalfTorusBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder

IhmGeometricObjectList - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_LIST category records the list of geometric objects used as restraints in the integrative modeling study.

IhmGeometricObjectList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectList

IhmGeometricObjectListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectListBuilder

IhmGeometricObjectPlane - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_PLANE category records the details of a plane used in a spatial restraint.

IhmGeometricObjectPlane(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectPlane

IhmGeometricObjectPlaneBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder

IhmGeometricObjectSphere - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_SPHERE category records the parameters of a sphere.

IhmGeometricObjectSphere(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectSphere

IhmGeometricObjectSphereBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder

IhmGeometricObjectTorus - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_TORUS category records the parameters of a torus.

IhmGeometricObjectTorus(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectTorus

IhmGeometricObjectTorusBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder

IhmGeometricObjectTransformation - Class in org.rcsb.cif.schema.mm

Data items in the IHM_GEOMETRIC_OBJECT_TRANSFORMATION category records the details of the rotation matrix and translation vector applied for transforming the geometric object.

IhmGeometricObjectTransformation(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmGeometricObjectTransformation

IhmGeometricObjectTransformationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder

IhmHdxRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_HDX_RESTRAINT category captures the details of restraints derived from Hydrogen-Deuterium Exchange experiments.

IhmHdxRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmHdxRestraint

IhmHdxRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHdxRestraintBuilder

IhmHydroxylRadicalFpRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_HYDROXYL_RADICAL_FP_RESTRAINT category records the restraints derived from hydroxyl radical footprinting experiment.

IhmHydroxylRadicalFpRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmHydroxylRadicalFpRestraint

IhmHydroxylRadicalFpRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder

IhmInterfaceResidueFeature - Class in org.rcsb.cif.schema.mm

Data items in the IHM_INTERFACE_RESIDUE_FEATURE category captures the details of residues that are identified to be at the binding interface from experiments.

IhmInterfaceResidueFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmInterfaceResidueFeature

IhmInterfaceResidueFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder

IhmLigandProbe - Class in org.rcsb.cif.schema.mm

Data items in the IHM_LIGAND_PROBE category identifies non-polymeric entities (ligands) that are used as probes.

IhmLigandProbe(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmLigandProbe

IhmLigandProbeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLigandProbeBuilder

IhmLocalizationDensityFiles - Class in org.rcsb.cif.schema.mm

Data items in the IHM_LOCALIZATION_DENSITY_FILES category records the details of files that provide information regarding localization densities of ensembles.

IhmLocalizationDensityFiles(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmLocalizationDensityFiles

IhmLocalizationDensityFilesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder

IhmModelGroup - Class in org.rcsb.cif.schema.mm

IHM_MODEL_GROUP category defines collections or groups of integrative structural models.

IhmModelGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelGroup

IhmModelGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupBuilder

IhmModelGroupLink - Class in org.rcsb.cif.schema.mm

IHM_MODEL_GROUP_LINK category provides the list of models present in a particular model group.

IhmModelGroupLink(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelGroupLink

IhmModelGroupLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelGroupLinkBuilder

IhmModelingPostProcess - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODELING_POST_PROCESS category records the details of the post processing of the models/results of the modeling protocol.

IhmModelingPostProcess(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelingPostProcess

IhmModelingPostProcessBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingPostProcessBuilder

IhmModelingProtocol - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODELING_PROTOCOL category lists all modeling protocols used in the integrative modeling study.

IhmModelingProtocol(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelingProtocol

IhmModelingProtocolBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolBuilder

IhmModelingProtocolDetails - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODELING_PROTOCOL_DETAILS category records the step-wise details of the integrative modeling workflow.

IhmModelingProtocolDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelingProtocolDetails

IhmModelingProtocolDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder

IhmModelList - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODEL_LIST category record the details of the models being deposited.

IhmModelList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelList

IhmModelListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelListBuilder

IhmModelRepresentation - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODEL_REPRESENTATION category lists the various mono or multi-scale model representations used in the integrative modeling study.

IhmModelRepresentation(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelRepresentation

IhmModelRepresentationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationBuilder

IhmModelRepresentationDetails - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODEL_REPRESENTATION_DETAILS category records the details about the architecture and representation of structural models involved in the integrative modeling study.

IhmModelRepresentationDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelRepresentationDetails

IhmModelRepresentationDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder

IhmModelRepresentative - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MODEL_REPRESENTATIVE category record the details of the representative model in an ensemble or cluster.

IhmModelRepresentative(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmModelRepresentative

IhmModelRepresentativeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmModelRepresentativeBuilder

IhmMultiStateModelGroupLink - Class in org.rcsb.cif.schema.mm

IHM_MULTI_STATE_MODEL_GROUP_LINK category provides the list of models groups corresponding to a particular state.

IhmMultiStateModelGroupLink(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmMultiStateModelGroupLink

IhmMultiStateModelGroupLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelGroupLinkBuilder

IhmMultiStateModeling - Class in org.rcsb.cif.schema.mm

Data items in the IHM_MULTI_STATE_MODELING category records the details of the multi-state modeling protocol, if applicable.

IhmMultiStateModeling(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmMultiStateModeling

IhmMultiStateModelingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmMultiStateModelingBuilder

IhmNonPolyFeature - Class in org.rcsb.cif.schema.mm

Data items in the IHM_NON_POLY_FEATURE category provides the defintions required to select a non-polymeric (ligand) feature.

IhmNonPolyFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmNonPolyFeature

IhmNonPolyFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmNonPolyFeatureBuilder

IhmOrderedEnsemble - Class in org.rcsb.cif.schema.mm

Data items in the IHM_ORDERED_ENSEMBLE category records the details of the ensembles ordered by time or other order.

IhmOrderedEnsemble(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmOrderedEnsemble

IhmOrderedEnsembleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmOrderedEnsembleBuilder

IhmPolyAtomFeature - Class in org.rcsb.cif.schema.mm

Data items in the IHM_POLY_ATOM_FEATURE category provides the defintions required to select specific atoms.

IhmPolyAtomFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPolyAtomFeature

IhmPolyAtomFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder

IhmPolyProbeConjugate - Class in org.rcsb.cif.schema.mm

Data items in the IHM_POLY_PROBE_CONJUGATE category records the details of the probes that are covalenty attached to residues in the polymeric entities.

IhmPolyProbeConjugate(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPolyProbeConjugate

IhmPolyProbeConjugateBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder

IhmPolyProbePosition - Class in org.rcsb.cif.schema.mm

Data items in the IHM_POLY_PROBE_POSITION category identifies specific residue positions in the polymeric entity where probes are covalently attached.

IhmPolyProbePosition(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPolyProbePosition

IhmPolyProbePositionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyProbePositionBuilder

IhmPolyResidueFeature - Class in org.rcsb.cif.schema.mm

Data items in the IHM_POLY_RESIDUE_FEATURE category provides the defintions required to select a specific residue or a set of residues that may or may not be in a contiguous range.

IhmPolyResidueFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPolyResidueFeature

IhmPolyResidueFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder

IhmPredictedContactRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_PREDICTED_CONTACT_RESTRAINT category records the list of predicted contacts used in the integrative modeling experiment.

IhmPredictedContactRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPredictedContactRestraint

IhmPredictedContactRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder

IhmProbeList - Class in org.rcsb.cif.schema.mm

Data items in the IHM_PROBE_LIST category records the list of probes used in the experiment.

IhmProbeList(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmProbeList

IhmProbeListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmProbeListBuilder

IhmPseudoSite - Class in org.rcsb.cif.schema.mm

Data items in the IHM_PSEUDO_SITE_FEATURE category records the details of pseudo sites that may be used in the restraints or model representation.

IhmPseudoSite(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPseudoSite

IhmPseudoSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteBuilder

IhmPseudoSiteFeature - Class in org.rcsb.cif.schema.mm

Data items in the IHM_PSEUDO_SITE_FEATURE category records the details of pseudo site features listed in IHM_FEATURE_LIST.

IhmPseudoSiteFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmPseudoSiteFeature

IhmPseudoSiteFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmPseudoSiteFeatureBuilder

IhmRelatedDatasets - Class in org.rcsb.cif.schema.mm

Category holds information about related datasets, where one is derived from the other.

IhmRelatedDatasets(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmRelatedDatasets

IhmRelatedDatasetsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmRelatedDatasetsBuilder

IhmResiduesNotModeled - Class in org.rcsb.cif.schema.mm

Data items in the IHM_RESIDUES_NOT_MODELED category record the details of the residues that are defined in the IHM_STRUCT_ASSEMBLY category but are missing in the three-dimensional model (ATOM_SITE, IHM_SPHERE_OBJ_SITE, IHM_GAUSSIAN_OBJ_SITE categories) i.e., residues in the assembly that are not modeled.

IhmResiduesNotModeled(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmResiduesNotModeled

IhmResiduesNotModeledBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmResiduesNotModeledBuilder

IhmSasRestraint - Class in org.rcsb.cif.schema.mm

Data items in the IHM_SAS_RESTRAINT category records the details of the SAS data used as restraints in the IHM modeling.

IhmSasRestraint(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmSasRestraint

IhmSasRestraintBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSasRestraintBuilder

IhmSphereObjSite - Class in org.rcsb.cif.schema.mm

Data items in the IHM_SPHERE_OBJ_SITE category records the details of the spherical objects modeled in the integrative structural model.

IhmSphereObjSite(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmSphereObjSite

IhmSphereObjSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmSphereObjSiteBuilder

IhmStartingComparativeModels - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STARTING_COMPARATIVE_MODELS category records additional details about comparative models used as starting inputs in the integrative model building process.

IhmStartingComparativeModels(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStartingComparativeModels

IhmStartingComparativeModelsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder

IhmStartingComputationalModels - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STARTING_COMPUTATIONAL_MODELS category records additional details about computational models used as starting inputs in the integrative model building process.

IhmStartingComputationalModels(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStartingComputationalModels

IhmStartingComputationalModelsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder

IhmStartingModelCoord - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STARTING_MODEL_COORD category records the coordinates for structural templates used as starting inputs in the integrative model building tasks.

IhmStartingModelCoord(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStartingModelCoord

IhmStartingModelCoordBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelCoordBuilder

IhmStartingModelDetails - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STARTING_MODEL_DETAILS category records the details about structural models used as starting inputs in the integrative model building process.

IhmStartingModelDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStartingModelDetails

IhmStartingModelDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelDetailsBuilder

IhmStartingModelSeqDif - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STARTING_MODEL_SEQ_DIF category provide a mechanism for indicating and annotating point differences between the sequence of the entity or biological unit described in the data block and the sequence of the starting model used in the integrative modeling referenced from a database.

IhmStartingModelSeqDif(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStartingModelSeqDif

IhmStartingModelSeqDifBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder

IhmStructAssembly - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STRUCT_ASSEMBLY category lists all the structural assemblies used in the integrative modeling study.

IhmStructAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStructAssembly

IhmStructAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyBuilder

IhmStructAssemblyClass - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STRUCT_ASSEMBLY_CLASS category lists all the structural assembly classes relevant to the entry.

IhmStructAssemblyClass(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStructAssemblyClass

IhmStructAssemblyClassBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassBuilder

IhmStructAssemblyClassLink - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STRUCT_ASSEMBLY_CLASS_LINK category provides details regarding the structural assembly classes.

IhmStructAssemblyClassLink(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStructAssemblyClassLink

IhmStructAssemblyClassLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyClassLinkBuilder

IhmStructAssemblyDetails - Class in org.rcsb.cif.schema.mm

Data items in the IHM_STRUCT_ASSEMBLY_DETAILS category records the details of the structural assemblies and used in the integrative modeling.

IhmStructAssemblyDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.IhmStructAssemblyDetails

IhmStructAssemblyDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder

INT16 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Int16Array - Class in org.rcsb.cif.binary.data

An array of (signed) integer numbers using 16 bit to store each value.

Int16Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Int16Array

Int16Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Int16Array

Int16Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Int16Array

INT32 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Int32Array - Class in org.rcsb.cif.binary.data

An array of (signed) integer numbers using 32 bit to store each value.

Int32Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Int32Array

Int32Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Int32Array

Int32Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Int32Array

INT8 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Int8Array - Class in org.rcsb.cif.binary.data

An array of (signed) integer numbers using 8 bit to store each value.

Int8Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Int8Array

Int8Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Int8Array

Int8Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Int8Array

IntArray - Interface in org.rcsb.cif.binary.data

An array of integer numbers.

IntColumn - Interface in org.rcsb.cif.model

A column that provides int data.

IntColumnBuilder<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Interface in org.rcsb.cif.model

A builder instance for IntColumn instances.

IntColumnBuilderImpl<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

IntColumnBuilderImpl(String, String, P) - Constructor for class org.rcsb.cif.model.builder.IntColumnBuilderImpl

IntegerPackingEncoding - Class in org.rcsb.cif.binary.encoding

Stores a Int32Array using 8- or 16-bit values.

IntegerPackingEncoding() - Constructor for class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

IntegerPackingEncoding(int, boolean, int) - Constructor for class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

IntervalQuantizationEncoding - Class in org.rcsb.cif.binary.encoding

Converts an array of floating point numbers to a Int32Array where the values are quantized within a given interval into specified number of discrete steps.

IntervalQuantizationEncoding() - Constructor for class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

IntervalQuantizationEncoding(int, int, int, int) - Constructor for class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

IS_NATIVE_LITTLE_ENDIAN - Static variable in class org.rcsb.cif.binary.codec.BinaryCifCodec

isDefined() - Method in interface org.rcsb.cif.model.Category

States whether this Category is defined.

isDefined() - Method in interface org.rcsb.cif.model.Column

Queries this column whether it is defined.

isEmpty() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

isGzip() - Method in class org.rcsb.cif.CifOptions

Allows for downstream GZIP operations.

isSigned() - Method in interface org.rcsb.cif.binary.data.IntArray

isSigned() - Method in interface org.rcsb.cif.binary.data.SignedIntArray

isSigned() - Method in interface org.rcsb.cif.binary.data.UnsignedIntArray

States whether this IntArray contains signed elements.

J

Journal - Class in org.rcsb.cif.schema.core

Category of items recording details about the book-keeping by the journal staff when processing a CIF submitted for publication.

Journal - Class in org.rcsb.cif.schema.mm

Data items in the JOURNAL category record details about the book-keeping by the journal staff when processing a data block submitted for publication.

Journal(Category) - Constructor for class org.rcsb.cif.schema.mm.Journal

Journal(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Journal

JournalBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalBuilder

JournalBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalBuilder

JournalCoeditor - Class in org.rcsb.cif.schema.core

Category of items recording co-editor details.

JournalCoeditor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.JournalCoeditor

JournalCoeditorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalCoeditorBuilder

JournalDate - Class in org.rcsb.cif.schema.core

Category of items recording dates of publication processing.

JournalDate(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.JournalDate

JournalDateBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalDateBuilder

JournalIndex - Class in org.rcsb.cif.schema.core

Category of items describing publication indices.

JournalIndex - Class in org.rcsb.cif.schema.mm

Data items in the JOURNAL_INDEX category are used to list terms used to generate the journal indexes.

JournalIndex(Category) - Constructor for class org.rcsb.cif.schema.mm.JournalIndex

JournalIndex(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.JournalIndex

JournalIndexBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalIndexBuilder

JournalIndexBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.JournalIndexBuilder

JournalTecheditor - Class in org.rcsb.cif.schema.core

Category of items recording details of the technical editor processing this publication.

JournalTecheditor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.JournalTecheditor

JournalTecheditorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.JournalTecheditorBuilder

K

keySet() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

L

leaveBlock() - Method in interface org.rcsb.cif.model.BlockBuilder

Leave this block and move back to the parent builder at CifFile level.

leaveBlock() - Method in class org.rcsb.cif.model.builder.BlockBuilderImpl

leaveBlock() - Method in class org.rcsb.cif.schema.core.CifCoreBlockBuilder

leaveBlock() - Method in class org.rcsb.cif.schema.mm.MmCifBlockBuilder

leaveCategory() - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

leaveCategory() - Method in interface org.rcsb.cif.model.CategoryBuilder

Leave this category and move back to the parent builder at Block level.

leaveColumn() - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

leaveColumn() - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

leaveColumn() - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

leaveColumn() - Method in interface org.rcsb.cif.model.ColumnBuilder

Leave this column.

leaveFile() - Method in class org.rcsb.cif.model.builder.CifFileBuilderImpl

leaveFile() - Method in interface org.rcsb.cif.model.CifFileBuilder

Leave this builder instance.

leaveFile() - Method in class org.rcsb.cif.schema.core.CifCoreFileBuilder

leaveFile() - Method in class org.rcsb.cif.schema.mm.MmCifFileBuilder

length() - Method in class org.rcsb.cif.binary.data.ByteArray

length() - Method in interface org.rcsb.cif.binary.data.EncodedData

The number of elements in the wrapped array.

length() - Method in class org.rcsb.cif.binary.data.Float32Array

length() - Method in class org.rcsb.cif.binary.data.Float64Array

length() - Method in interface org.rcsb.cif.binary.data.FloatArray

length() - Method in class org.rcsb.cif.binary.data.Int16Array

length() - Method in class org.rcsb.cif.binary.data.Int32Array

length() - Method in class org.rcsb.cif.binary.data.Int8Array

length() - Method in interface org.rcsb.cif.binary.data.IntArray

length() - Method in class org.rcsb.cif.binary.data.StringArray

length() - Method in class org.rcsb.cif.binary.data.Uint16Array

length() - Method in class org.rcsb.cif.binary.data.Uint32Array

length() - Method in class org.rcsb.cif.binary.data.Uint8Array

LinkedCaseInsensitiveMap<V> - Class in org.rcsb.cif.model

LinkedHashMap variant that stores String keys in a case-insensitive manner, for example for key-based access in a results table.

LinkedCaseInsensitiveMap() - Constructor for class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Create a new LinkedCaseInsensitiveMap that stores case-insensitive keys according to the default Locale (by default in lower case).

LinkedCaseInsensitiveMap(int) - Constructor for class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Create a new LinkedCaseInsensitiveMap that wraps a LinkedHashMap with the given initial capacity and stores case-insensitive keys according to the default Locale (by default in lower case).

LinkedCaseInsensitiveMap(int, Locale) - Constructor for class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Create a new LinkedCaseInsensitiveMap that wraps a LinkedHashMap with the given initial capacity and stores case-insensitive keys according to the given Locale (by default in lower case).

LinkedCaseInsensitiveMap(Locale) - Constructor for class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Create a new LinkedCaseInsensitiveMap that stores case-insensitive keys according to the given Locale (by default in lower case).

M

main(String[]) - Static method in class org.rcsb.cif.Demo

main(String[]) - Static method in class org.rcsb.cif.schema.generator.SchemaGenerator

markNextNotPresent() - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

markNextNotPresent() - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

markNextNotPresent() - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

markNextNotPresent() - Method in interface org.rcsb.cif.model.ColumnBuilder

Specify that the next value written is not present (aka undefined).

markNextNotPresent() - Method in interface org.rcsb.cif.model.FloatColumnBuilder

markNextNotPresent() - Method in interface org.rcsb.cif.model.IntColumnBuilder

markNextNotPresent() - Method in interface org.rcsb.cif.model.StrColumnBuilder

markNextUnknown() - Method in class org.rcsb.cif.model.builder.FloatColumnBuilderImpl

markNextUnknown() - Method in class org.rcsb.cif.model.builder.IntColumnBuilderImpl

markNextUnknown() - Method in class org.rcsb.cif.model.builder.StrColumnBuilderImpl

markNextUnknown() - Method in interface org.rcsb.cif.model.ColumnBuilder

Specify that the next value written is unknown.

markNextUnknown() - Method in interface org.rcsb.cif.model.FloatColumnBuilder

markNextUnknown() - Method in interface org.rcsb.cif.model.IntColumnBuilder

markNextUnknown() - Method in interface org.rcsb.cif.model.StrColumnBuilder

MessagePackCodec - Class in org.rcsb.cif.binary.codec

Decodes and encodes MessagePack data.

MessagePackCodec() - Constructor for class org.rcsb.cif.binary.codec.MessagePackCodec

MIN_VERSION - Static variable in class org.rcsb.cif.binary.codec.BinaryCifCodec

MMCIF - Static variable in class org.rcsb.cif.schema.StandardSchemata

MmCifBlock - Class in org.rcsb.cif.schema.mm

MmCifBlock(Block) - Constructor for class org.rcsb.cif.schema.mm.MmCifBlock

MmCifBlockBuilder - Class in org.rcsb.cif.schema.mm

MmCifBlockBuilder(String, MmCifFileBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifBlockBuilder

MmCifCategoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder(String, MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder

MmCifCategoryBuilder.AtomSiteAnisotropBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSitesAltBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSitesAltEnsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSitesAltGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSitesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomSitesFootnoteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AtomTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AuditAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AuditConformBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AuditContactAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.AuditLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CellMeasurementBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CellMeasurementReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompChirAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompChirBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompPlaneAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompPlaneBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompTorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemCompTorValueBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemicalBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemicalConnAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemicalConnBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemicalFormulaBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkChirAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkChirBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkPlaneBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkTorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ChemLinkTorValueBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CitationAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CitationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.CitationEditorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ComputingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Database2Builder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabaseBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBCaveatBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBMatrixBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBRemarkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBRevBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBRevRecordBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DatabasePDBTvectBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnAttenuatorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnDetectorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnMeasurementBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnOrientMatrixBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnOrientReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnRadiationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnReflnsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnReflnsClassBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnScaleGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnSourceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnStandardReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.DiffrnStandardsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em2dCrystalEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em2dProjectionSelectionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em3dCrystalEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em3dFittingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em3dFittingListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Em3dReconstructionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmAdminBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmAuthorListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmBufferBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmBufferComponentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmCrystalFormationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmCtfCorrectionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDbReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDepuiBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDetectorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDiffractionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDiffractionShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmDiffractionStatsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEmbeddingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEntityAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmExperimentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmFiducialMarkersBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmFigureDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmFinalClassificationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmFocusedIonBeamBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmFscCurveBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmGridPretreatmentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmHelicalEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmHighPressureFreezingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmImageProcessingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmImageRecordingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmImageScansBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmImagingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmImagingOpticsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmInterpretFigureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmLayerLinesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmMapBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmMapDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmMaskDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmObsoleteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmParticleSelectionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSamplePreparationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSampleSupportBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmShadowingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSingleParticleEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSoftwareBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSpecimenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmStainingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmStartModelBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmStructureFactorsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSupersedeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmSupportFilmBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmTomographyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmTomographySpecimenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmUltramicrotomyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmVirusEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmVirusNaturalHostBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmVirusShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmVitrificationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EmVolumeSelectionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityKeywordsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityNameComBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityNameSysBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityPolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntityPolySeqBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntitySrcGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntitySrcNatBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.EntryLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ExptlBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ExptlCrystalBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ExptlCrystalFaceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ExptlCrystalGrowBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomContactBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomHbondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.GeomTorsionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.Ihm3demRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmCrossLinkListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmCrossLinkResultBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDatasetGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDatasetGroupLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDatasetListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDataTransformationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmEnsembleInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmEntityPolySegmentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmEprRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmExternalFilesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmFeatureListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGaussianObjSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmHdxRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmLigandProbeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelGroupLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelingPostProcessBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelingProtocolBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelRepresentationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmModelRepresentativeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmMultiStateModelGroupLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmMultiStateModelingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmNonPolyFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmOrderedEnsembleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPolyProbePositionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmProbeListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPseudoSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmPseudoSiteFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmRelatedDatasetsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmResiduesNotModeledBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmSasRestraintBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmSphereObjSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStartingModelCoordBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStartingModelDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStructAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStructAssemblyClassBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStructAssemblyClassLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.JournalBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.JournalIndexBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.NdbOriginalNdbCoordinatesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.NdbStructConfNaBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.NdbStructFeatureNaBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.NdbStructNaBasePairBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAtlasBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxAuditSupportBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxBranchSchemeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxBufferBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxBufferComponentsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompAuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompBondEditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompImportBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompNonstandardBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompRelatedBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxColumninfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConnectAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConnectBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConnectModificationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConnectTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConstructBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxConstructFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxContactAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxCoordBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxCoordinateModelBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseMessageBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabasePdbOmitBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseProcBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseRemarkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseStatusBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDataProcessingCellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDataProcessingStatusBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDbrefBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccDensityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccDensityCorrBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccGeometryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccMapBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccMapmanBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepositGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiUploadBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDomainBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDomainRangeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxDrugInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityBranchBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityBranchListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityFuncEnzymeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityFuncOtherBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityFuncRegulatoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityFuncStructuralBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityNameBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityNonpolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityPolyNaNonstandardBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityPolyNaTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityPolyProteinClassBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntitySrcSynBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxEntryDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxExptlPdBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFamilyGroupIndexBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFeatureDomainBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFeatureEntryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFeatureMonomerBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxHybridBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxInhibitorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxIonInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxLinkedEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxLinkedEntityListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMissingResidueListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMoleculeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNaStrandInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrComputingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrConstraintsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrEnsembleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrExptlBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrRefineBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSoftwareBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNmrUploadBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNonpolySchemeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxNonstandardListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPdbCompndBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPdbSourceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingDmBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingDmShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingMADSetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingMADShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPhasingMRBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPointSymmetryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPostProcessStatusBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPrdAuditBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxPrereleaseSeqBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxProteinInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReferencePublicationListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineAuxFileBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineComponentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineTlsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReflnsTwinBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxReRefinementBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRmchOutlierBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxRobotSystemBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSequenceAnnotationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSequencePatternBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSequenceRangeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSGProjectBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSolnScatterBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSolnScatterModelBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSolventInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSourceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStereochemistryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructAsymGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructBiolFuncBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructConnAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructEntityInstBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructGroupListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructLinkBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructModResidueBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructMsymGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructOperListBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructPackGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructSheetHbondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSummaryFlagsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxTableinfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxTrnaInfoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxUnpairBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValChiralBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValContactBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateChiralBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateCloseContactBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidatePlanesBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateSymmContactBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValidateTorsionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxValSymContactBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxVersionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxViewCategoryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxViewCategoryGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxViewItemBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxVirtualAngleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxVirtualBondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxVirtualTorsionBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PdbxXplorFileBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingAveragingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingIsomorphousBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMADBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMADClustBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMADExptBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMADRatioBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMADSetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRDerBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRDerReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRDerShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRDerSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingMIRShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingSetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PhasingSetReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PublAuthorBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PublBodyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PublBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.PublManuscriptInclBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineAnalyzeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineBIsoBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineFunctMinimizedBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineHistBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineLsClassBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineLsRestrBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineLsRestrNcsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineLsRestrTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineLsShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.RefineOccupancyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnsClassBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnsScaleBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnsShellBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ReflnSysAbsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.SoftwareBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.SpaceGroupBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.SpaceGroupSymopBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructAsymBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructBiolBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructBiolGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructBiolKeywordsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructBiolViewBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructConfBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructConfTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructConnBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructConnTypeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructKeywordsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructMonDetailsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructMonNuclBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructMonProtBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructMonProtCisBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructNcsDomBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructNcsDomLimBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructNcsEnsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructNcsEnsGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructNcsOperBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructRefBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructRefSeqBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructRefSeqDifBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSheetBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSheetHbondBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSheetOrderBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSheetRangeBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSheetTopologyBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSiteBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSiteGenBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSiteKeywordsBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.StructSiteViewBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.SymmetryBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.SymmetryEquivBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ValenceParamBuilder - Class in org.rcsb.cif.schema.mm

MmCifCategoryBuilder.ValenceRefBuilder - Class in org.rcsb.cif.schema.mm

MmCifFile - Class in org.rcsb.cif.schema.mm

MmCifFile(CifFile) - Constructor for class org.rcsb.cif.schema.mm.MmCifFile

MmCifFileBuilder - Class in org.rcsb.cif.schema.mm

MmCifFileBuilder() - Constructor for class org.rcsb.cif.schema.mm.MmCifFileBuilder

MmCifSchemaProvider - Class in org.rcsb.cif.schema

Provides schema support for mmCIF files.

MmCifSchemaProvider() - Constructor for class org.rcsb.cif.schema.MmCifSchemaProvider

Model - Class in org.rcsb.cif.schema.core

Items in the MODEL Category specify data for the crystal structure postulated and modelled from the atomic coordinates derived and refined from the diffraction information.

Model(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Model

ModelBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelBuilder

ModelSite - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe atomic sites and connections in the proposed atomic model.

ModelSite(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ModelSite

ModelSiteBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ModelSiteBuilder

N

NdbOriginalNdbCoordinates - Class in org.rcsb.cif.schema.mm

Placeholder category for PDB coordinate data.

NdbOriginalNdbCoordinates(Category) - Constructor for class org.rcsb.cif.schema.mm.NdbOriginalNdbCoordinates

NdbOriginalNdbCoordinatesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbOriginalNdbCoordinatesBuilder

NdbStructConfNa - Class in org.rcsb.cif.schema.mm

Data items in the NDB_STRUCT_CONF_NA category describes secondary structure features in this entry.

NdbStructConfNa(Category) - Constructor for class org.rcsb.cif.schema.mm.NdbStructConfNa

NdbStructConfNaBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructConfNaBuilder

NdbStructFeatureNa - Class in org.rcsb.cif.schema.mm

Data items in the NDB_STRUCT_FEATURE_NA category describes tertiary and other special structural features in this entry.

NdbStructFeatureNa(Category) - Constructor for class org.rcsb.cif.schema.mm.NdbStructFeatureNa

NdbStructFeatureNaBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructFeatureNaBuilder

NdbStructNaBasePair - Class in org.rcsb.cif.schema.mm

Data items in the NDB_STRUCT_NA_BASE_PAIR category record details of base pairing interactions.

NdbStructNaBasePair(Category) - Constructor for class org.rcsb.cif.schema.mm.NdbStructNaBasePair

NdbStructNaBasePairBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairBuilder

NdbStructNaBasePairStep - Class in org.rcsb.cif.schema.mm

Data items in the NDB_STRUCT_NA_BASE_PAIR_STEP category record details of base pair step interactions.

NdbStructNaBasePairStep(Category) - Constructor for class org.rcsb.cif.schema.mm.NdbStructNaBasePairStep

NdbStructNaBasePairStepBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder

NOT_PRESENT - org.rcsb.cif.model.ValueKind

The value is explicitly not present - . in CIF.

NumberArray<D> - Interface in org.rcsb.cif.binary.data

An array of numbers.

O

org.rcsb.cif - package org.rcsb.cif

org.rcsb.cif.binary - package org.rcsb.cif.binary

org.rcsb.cif.binary.codec - package org.rcsb.cif.binary.codec

org.rcsb.cif.binary.data - package org.rcsb.cif.binary.data

org.rcsb.cif.binary.encoding - package org.rcsb.cif.binary.encoding

org.rcsb.cif.model - package org.rcsb.cif.model

org.rcsb.cif.model.binary - package org.rcsb.cif.model.binary

org.rcsb.cif.model.builder - package org.rcsb.cif.model.builder

org.rcsb.cif.model.text - package org.rcsb.cif.model.text

org.rcsb.cif.schema - package org.rcsb.cif.schema

org.rcsb.cif.schema.core - package org.rcsb.cif.schema.core

org.rcsb.cif.schema.generator - package org.rcsb.cif.schema.generator

org.rcsb.cif.schema.mm - package org.rcsb.cif.schema.mm

org.rcsb.cif.text - package org.rcsb.cif.text

P

parent - Variable in class org.rcsb.cif.model.builder.BlockBuilderImpl

parent - Variable in class org.rcsb.cif.model.builder.CategoryBuilderImpl

parentBlock - Variable in class org.rcsb.cif.schema.DelegatingCategory.DelegatingCifCoreCategory

parseFloat(String) - Static method in interface org.rcsb.cif.model.FloatColumn

This is how all FloatColumns parse their data.

parseInt(String) - Static method in interface org.rcsb.cif.model.IntColumn

This is how all IntColumns parse their data.

ParsingException - Exception in org.rcsb.cif

Indicates that Cif parsing failed.

ParsingException(String) - Constructor for exception org.rcsb.cif.ParsingException

ParsingException(String, int) - Constructor for exception org.rcsb.cif.ParsingException

ParsingException(String, Exception) - Constructor for exception org.rcsb.cif.ParsingException

PdbxAtlas - Class in org.rcsb.cif.schema.mm

Gives information about the organization of the NDB Structural Atlas.

PdbxAtlas(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAtlas

PdbxAtlasBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtlasBuilder

PdbxAtomSiteAnisoTls - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ATOM_SITE_ANISO_TLS category record details about the TLS contribution to anisotropic displacement parameters.

PdbxAtomSiteAnisoTls(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAtomSiteAnisoTls

PdbxAtomSiteAnisoTlsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder

PdbxAudit - Class in org.rcsb.cif.schema.mm

The PDBX_AUDIT holds current version information.

PdbxAudit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAudit

PdbxAuditAuthor - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_AUTHOR category record details about the author(s) of the data block.

PdbxAuditAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditAuthor

PdbxAuditAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditAuthorBuilder

PdbxAuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditBuilder

PdbxAuditConformExtension - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_CONFORM_EXTENSION category describe extension dictionary versions against which the data names appearing the current data block are conformant.

PdbxAuditConformExtension(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditConformExtension

PdbxAuditConformExtensionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder

PdbxAuditRevisionCategory - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_REVISION_CATEGORY category report the data categories associated with a PDBX_AUDIT_REVISION_HISTORY record.

PdbxAuditRevisionCategory(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditRevisionCategory

PdbxAuditRevisionCategoryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder

PdbxAuditRevisionDetails - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_audit_revision_details category record descriptions of changes associated with PDBX_AUDIT_REVISION_HISTORY records.

PdbxAuditRevisionDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditRevisionDetails

PdbxAuditRevisionDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder

PdbxAuditRevisionGroup - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_revision_group category report the content groups associated with a PDBX_AUDIT_REVISION_HISTORY record.

PdbxAuditRevisionGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditRevisionGroup

PdbxAuditRevisionGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder

PdbxAuditRevisionHistory - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_REVISION_HISTORY category record the revision history for a data entry.

PdbxAuditRevisionHistory(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditRevisionHistory

PdbxAuditRevisionHistoryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder

PdbxAuditRevisionItem - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_REVISION_ITEM category report the data items associated with a PDBX_AUDIT_REVISION_HISTORY record.

PdbxAuditRevisionItem(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditRevisionItem

PdbxAuditRevisionItemBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder

PdbxAuditSupport - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_AUDIT_SUPPORT category record details about funding support for the entry.

PdbxAuditSupport(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxAuditSupport

PdbxAuditSupportBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxAuditSupportBuilder

PdbxBondDistanceLimits - Class in org.rcsb.cif.schema.mm

This category provides a table of upper and lower distance limits used as criteria in determining covalent bonds.

PdbxBondDistanceLimits(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxBondDistanceLimits

PdbxBondDistanceLimitsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder

PdbxBranchScheme - Class in org.rcsb.cif.schema.mm

The PDBX_BRANCH_SCHEME category provides residue level nomenclature mapping for branch chain entities.

PdbxBranchScheme(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxBranchScheme

PdbxBranchSchemeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBranchSchemeBuilder

PdbxBuffer - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_BUFFER category record details of the sample buffer.

PdbxBuffer(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxBuffer

PdbxBufferBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferBuilder

PdbxBufferComponents - Class in org.rcsb.cif.schema.mm

Constituents of buffer in sample

PdbxBufferComponents(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxBufferComponents

PdbxBufferComponentsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxBufferComponentsBuilder

PdbxChemCompAtomEdit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_ATOM_EDIT category provide atom level editing instructions to be applied to imported chemical components.

PdbxChemCompAtomEdit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompAtomEdit

PdbxChemCompAtomEditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder

PdbxChemCompAtomFeature - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_ATOM_FEATURE category provide a selected list of atom level features for the chemical component.

PdbxChemCompAtomFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompAtomFeature

PdbxChemCompAtomFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder

PdbxChemCompAtomRelated - Class in org.rcsb.cif.schema.mm

PDBX_CHEM_COMP_ATOM_RELATED provides atom level nomenclature mapping between two related chemical components.

PdbxChemCompAtomRelated(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompAtomRelated

PdbxChemCompAtomRelatedBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder

PdbxChemCompAudit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_AUDIT category records the status and tracking information for this component.

PdbxChemCompAudit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompAudit

PdbxChemCompAuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompAuditBuilder

PdbxChemCompBondEdit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_BOND_EDIT category provide bond level editing instructions to be applied to imported chemical components.

PdbxChemCompBondEdit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompBondEdit

PdbxChemCompBondEditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompBondEditBuilder

PdbxChemCompDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_DEPOSITOR_INFO category record additional details provided by depositors about deposited chemical components.

PdbxChemCompDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo

PdbxChemCompDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder

PdbxChemCompDescriptor - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_DESCRIPTOR category provide string descriptors of component chemical structure.

PdbxChemCompDescriptor(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompDescriptor

PdbxChemCompDescriptorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder

PdbxChemCompFeature - Class in org.rcsb.cif.schema.mm

Additional features associated with the chemical component.

PdbxChemCompFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompFeature

PdbxChemCompFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompFeatureBuilder

PdbxChemCompIdentifier - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_IDENTIFIER category provide identifiers for chemical components.

PdbxChemCompIdentifier(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompIdentifier

PdbxChemCompIdentifierBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder

PdbxChemCompImport - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_IMPORT category identify existing chemical components to be imported into the current component definition.

PdbxChemCompImport(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompImport

PdbxChemCompImportBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompImportBuilder

PdbxChemCompInstanceDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_INSTANCE_DEPOSITOR_INFO category records depositor provided information about the chemical context of component instances.

PdbxChemCompInstanceDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompInstanceDepositorInfo

PdbxChemCompInstanceDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder

PdbxChemCompModel - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_MODEL category give details about each of the chemical component model instances.

PdbxChemCompModel(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModel

PdbxChemCompModelAtom - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_MODEL_ATOM category record coordinates for the chemical component model instance.

PdbxChemCompModelAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelAtom

PdbxChemCompModelAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder

PdbxChemCompModelAudit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_MODEL_AUDIT category records the status and tracking information for this component model instance.

PdbxChemCompModelAudit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelAudit

PdbxChemCompModelAuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder

PdbxChemCompModelBond - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_MODEL_BOND category record details about the bonds between atoms in a chemical component model instance.

PdbxChemCompModelBond(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelBond

PdbxChemCompModelBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBondBuilder

PdbxChemCompModelBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelBuilder

PdbxChemCompModelDescriptor - Class in org.rcsb.cif.schema.mm

Data items in the CHEM_COMP_MODEL_DESCRIPTOR category provide string descriptors for component model structures.

PdbxChemCompModelDescriptor(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelDescriptor

PdbxChemCompModelDescriptorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder

PdbxChemCompModelFeature - Class in org.rcsb.cif.schema.mm

Additional features associated with the chemical component.

PdbxChemCompModelFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelFeature

PdbxChemCompModelFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder

PdbxChemCompModelReference - Class in org.rcsb.cif.schema.mm

Additional features associated with the chemical component.

PdbxChemCompModelReference(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompModelReference

PdbxChemCompModelReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder

PdbxChemCompNonstandard - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_NONSTANDARD category describes common nucleotide modifications and nonstandard features.

PdbxChemCompNonstandard(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompNonstandard

PdbxChemCompNonstandardBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompNonstandardBuilder

PdbxChemCompRelated - Class in org.rcsb.cif.schema.mm

PDBX_CHEM_COMP_RELATED describes the relationship between two chemical components.

PdbxChemCompRelated(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompRelated

PdbxChemCompRelatedBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompRelatedBuilder

PdbxChemCompSubcomponentEntityList - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_chem_comp_subcomponent_entity_list category list the constituent chemical entities and entity features in this chemical component.

PdbxChemCompSubcomponentEntityList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentEntityList

PdbxChemCompSubcomponentEntityListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder

PdbxChemCompSubcomponentStructConn - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_chem_comp_subcomponent_struct_conn list the chemical interactions among the subcomponents in the chemical component.

PdbxChemCompSubcomponentStructConn(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompSubcomponentStructConn

PdbxChemCompSubcomponentStructConnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder

PdbxChemCompSynonyms - Class in org.rcsb.cif.schema.mm

PDBX_CHEM_COMP_SYNONYMS holds chemical name and synonym correspondences.

PdbxChemCompSynonyms(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompSynonyms

PdbxChemCompSynonymsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder

PdbxChemCompUploadDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CHEM_COMP_UPLOAD_DEPOSITOR_INFO category record details of the uploaded files related to depositor provided chemical assignments.

PdbxChemCompUploadDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxChemCompUploadDepositorInfo

PdbxChemCompUploadDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder

PdbxColumninfo - Class in org.rcsb.cif.schema.mm

PdbxColumninfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxColumninfo

PdbxColumninfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxColumninfoBuilder

PdbxConnect - Class in org.rcsb.cif.schema.mm

Local data items describing ligand and monomer chemical features.

PdbxConnect(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConnect

PdbxConnectAtom - Class in org.rcsb.cif.schema.mm

Local data items describing ligand and monomer atom names and connectivity.

PdbxConnectAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConnectAtom

PdbxConnectAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectAtomBuilder

PdbxConnectBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectBuilder

PdbxConnectModification - Class in org.rcsb.cif.schema.mm

Local data items describing ligand and monomer modifications.

PdbxConnectModification(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConnectModification

PdbxConnectModificationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectModificationBuilder

PdbxConnectType - Class in org.rcsb.cif.schema.mm

Local data items describing ligand and monomer type information.

PdbxConnectType(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConnectType

PdbxConnectTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConnectTypeBuilder

PdbxConstruct - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CONSTRUCT category specify a sequence of nucleic acids or amino acids.

PdbxConstruct(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConstruct

PdbxConstructBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructBuilder

PdbxConstructFeature - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CONSTRUCT_FEATURE category may be used to specify various properties of a nucleic acid sequence used during protein production.

PdbxConstructFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxConstructFeature

PdbxConstructFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxConstructFeatureBuilder

PdbxContactAuthor - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CONTACT_AUTHOR category record details about the name and address of the author to be contacted concerning the contents of this data block.

PdbxContactAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxContactAuthor

PdbxContactAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxContactAuthorBuilder

PdbxCoord - Class in org.rcsb.cif.schema.mm

Gives information about what kind of coordinates are available.

PdbxCoord(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxCoord

PdbxCoordBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordBuilder

PdbxCoordinateModel - Class in org.rcsb.cif.schema.mm

The details of the composition of the coordinate model.

PdbxCoordinateModel(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxCoordinateModel

PdbxCoordinateModelBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCoordinateModelBuilder

PdbxCrystalAlignment - Class in org.rcsb.cif.schema.mm

Data in the PDBX_CRYSTAL_ALIGNMENT are produced by log files from programs during indexing

PdbxCrystalAlignment(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxCrystalAlignment

PdbxCrystalAlignmentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder

PdbxDatabaseMessage - Class in org.rcsb.cif.schema.mm

The PDBX_DATABASE_MESSAGE category provides information about correspondance related to a structure deposition.

PdbxDatabaseMessage(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseMessage

PdbxDatabaseMessageBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseMessageBuilder

PdbxDatabasePDBMaster - Class in org.rcsb.cif.schema.mm

The PDBX_DATABASE_PDB_MASTER category provides placeholders for the count of various PDB record types.

PdbxDatabasePDBMaster(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabasePDBMaster

PdbxDatabasePDBMasterBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder

PdbxDatabasePDBObsSpr - Class in org.rcsb.cif.schema.mm

The PDBX_DATABASE_PDB_OBS_SPR category provides placeholders for information on obsolete/superseded PDB entries

PdbxDatabasePDBObsSpr(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabasePDBObsSpr

PdbxDatabasePDBObsSprBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder

PdbxDatabasePdbOmit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DATABASE_PDB_OMIT category record list PDB record names that should be omitted in the PDB format file.

PdbxDatabasePdbOmit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabasePdbOmit

PdbxDatabasePdbOmitBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabasePdbOmitBuilder

PdbxDatabaseProc - Class in org.rcsb.cif.schema.mm

Internal records to track the data processing cycle.

PdbxDatabaseProc(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseProc

PdbxDatabaseProcBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseProcBuilder

PdbxDatabaseRelated - Class in org.rcsb.cif.schema.mm

Data items in PDBX_DATABASE_RELATED contain references to entries that are related to the this entry.

PdbxDatabaseRelated(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseRelated

PdbxDatabaseRelatedBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder

PdbxDatabaseRemark - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DATABASE_REMARK category record keep additional information about the entry.

PdbxDatabaseRemark(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseRemark

PdbxDatabaseRemarkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseRemarkBuilder

PdbxDatabaseStatus - Class in org.rcsb.cif.schema.mm

These are internal RCSB records to keep track of data processing and status of the entry.

PdbxDatabaseStatus(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseStatus

PdbxDatabaseStatusBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusBuilder

PdbxDatabaseStatusHistory - Class in org.rcsb.cif.schema.mm

The pdbx_database_status_history category records the time evolution of entry processing status.

PdbxDatabaseStatusHistory(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDatabaseStatusHistory

PdbxDatabaseStatusHistoryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder

PdbxDataProcessingCell - Class in org.rcsb.cif.schema.mm

Crystallographic cell specifications used in data processing.

PdbxDataProcessingCell(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDataProcessingCell

PdbxDataProcessingCellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingCellBuilder

PdbxDataProcessingDetector - Class in org.rcsb.cif.schema.mm

Details of the detector used at data collection site.

PdbxDataProcessingDetector(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDataProcessingDetector

PdbxDataProcessingDetectorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder

PdbxDataProcessingReflns - Class in org.rcsb.cif.schema.mm

Details of reflections used in data processing.

PdbxDataProcessingReflns(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDataProcessingReflns

PdbxDataProcessingReflnsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder

PdbxDataProcessingStatus - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DATA_PROCESSING_STATUS category record data processing instructions for workflow processing tasks.

PdbxDataProcessingStatus(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDataProcessingStatus

PdbxDataProcessingStatusBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDataProcessingStatusBuilder

PdbxDbref - Class in org.rcsb.cif.schema.mm

These records are used in the DBREF record of a PDB file and are used as place holders for NDB ID's in PDB files.

PdbxDbref(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDbref

PdbxDbrefBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDbrefBuilder

PdbxDccDensity - Class in org.rcsb.cif.schema.mm

Data items in the category record various overall metrics calculated by DCC and various wrapped programs (such as Xtriage, pointless, REFMAC ...).

PdbxDccDensity(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccDensity

PdbxDccDensityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityBuilder

PdbxDccDensityCorr - Class in org.rcsb.cif.schema.mm

Data items in the category record calculated metrics from various programs (such as phenix, refmac, cns, sfcheck).

PdbxDccDensityCorr(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccDensityCorr

PdbxDccDensityCorrBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccDensityCorrBuilder

PdbxDccGeometry - Class in org.rcsb.cif.schema.mm

Data items in the category record the overall deviations about geometry (such as bond length, angle, dihedral, chirality, planarity).

PdbxDccGeometry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccGeometry

PdbxDccGeometryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccGeometryBuilder

PdbxDccMap - Class in org.rcsb.cif.schema.mm

Data items in the category record residual map properties such as Real Space electron density Correlation Coefficient (RSCC), real space R factors (RSR) and the Zscores for each residue, the main/side chains.

PdbxDccMap(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccMap

PdbxDccMapBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapBuilder

PdbxDccMapman - Class in org.rcsb.cif.schema.mm

Data items in the category record details from the output of mapman used by the DCC program.

PdbxDccMapman(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccMapman

PdbxDccMapmanBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccMapmanBuilder

PdbxDccRsccMapman - Class in org.rcsb.cif.schema.mm

Data items in this category record residual map properties such as correlation, real space Rfactors and the Zscore calculated from refmac and mapman.

PdbxDccRsccMapman(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccRsccMapman

PdbxDccRsccMapmanBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder

PdbxDccRsccMapmanOverall - Class in org.rcsb.cif.schema.mm

Data items in the category record overall map properties such as correlation, real space Rfactors and the Zscore calculated from refmac and mapman.

PdbxDccRsccMapmanOverall(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDccRsccMapmanOverall

PdbxDccRsccMapmanOverallBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder

PdbxDepositGroup - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_deposit_group category provide identifiers and related information for groups of entries deposited in a collection.

PdbxDepositGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepositGroup

PdbxDepositGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupBuilder

PdbxDepositGroupIndex - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_deposit_group_index category provides details about the individual data files in the collection of deposited entries.

PdbxDepositGroupIndex(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepositGroupIndex

PdbxDepositGroupIndexBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder

PdbxDepositionMessageFileReference - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPOSITION_MESSAGE_FILE_REFERENCE category record details of files references associated with messages defined in the PDBX_DEPOSITION_MESSAGE_INFO data category.

PdbxDepositionMessageFileReference(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepositionMessageFileReference

PdbxDepositionMessageFileReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder

PdbxDepositionMessageInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPOSITION_MESSAGE_INFO category record internal messages within the depositon and annotation system.

PdbxDepositionMessageInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepositionMessageInfo

PdbxDepositionMessageInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder

PdbxDepuiEntityFeatures - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_ENTITY_FEATURES category record status details related to the features of individual entities.

PdbxDepuiEntityFeatures(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiEntityFeatures

PdbxDepuiEntityFeaturesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder

PdbxDepuiEntityStatusFlags - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_ENTITY_STATUS_FLAGS category record status details related to individual entities.

PdbxDepuiEntityStatusFlags(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiEntityStatusFlags

PdbxDepuiEntityStatusFlagsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder

PdbxDepuiEntryDetails - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_ENTRY_DETAILS category record information required to identify the depositor and route deposition to an appropriate processing site.

PdbxDepuiEntryDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiEntryDetails

PdbxDepuiEntryDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder

PdbxDepuiStatusFlags - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_STATUS_FLAGS category record status details used to maintain state within the wwPDB deposition system.

PdbxDepuiStatusFlags(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

PdbxDepuiStatusFlagsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder

PdbxDepuiUpload - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_UPLOAD category record the details of uploaded data files.

PdbxDepuiUpload(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiUpload

PdbxDepuiUploadBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiUploadBuilder

PdbxDepuiValidationStatusFlags - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DEPUI_VALIDATION_STATUS_FLAGS category record status details that assess the status of selected validation diagnostics.

PdbxDepuiValidationStatusFlags(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDepuiValidationStatusFlags

PdbxDepuiValidationStatusFlagsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder

PdbxDiffrnReflnsShell - Class in org.rcsb.cif.schema.mm

Data items in the DIFFRN_REFLNS_SHELL category record details about the reflection data set within shells of resolution.

PdbxDiffrnReflnsShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDiffrnReflnsShell

PdbxDiffrnReflnsShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder

PdbxDistantSolventAtoms - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DISTANT_SOLVENT_ATOMS category list the solvent atoms remote from any macromolecule.

PdbxDistantSolventAtoms(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms

PdbxDistantSolventAtomsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder

PdbxDomain - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DOMAIN category record information about domain definitions.

PdbxDomain(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDomain

PdbxDomainBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainBuilder

PdbxDomainRange - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DOMAIN_RANGE category identify the beginning and ending points of polypeptide chain segments that form all or part of a domain.

PdbxDomainRange(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDomainRange

PdbxDomainRangeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDomainRangeBuilder

PdbxDrugInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_DRUG_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

PdbxDrugInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxDrugInfo

PdbxDrugInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxDrugInfoBuilder

PdbxEntityAssembly - Class in org.rcsb.cif.schema.mm

The PDBX_ENTITY_ASSEMBLY category provides a chemical description of the biological assembly studied in terms of its constituent entities.

PdbxEntityAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityAssembly

PdbxEntityAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityAssemblyBuilder

PdbxEntityBranch - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_BRANCH category specify the list of branched entities and the type.

PdbxEntityBranch(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityBranch

PdbxEntityBranchBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchBuilder

PdbxEntityBranchDescriptor - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_BRANCH_DESCRIPTOR category provide string descriptors of entity chemical structure.

PdbxEntityBranchDescriptor(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityBranchDescriptor

PdbxEntityBranchDescriptorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder

PdbxEntityBranchLink - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_BRANCH_LINK category give details about the linkages between components within a branched entity.

PdbxEntityBranchLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityBranchLink

PdbxEntityBranchLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder

PdbxEntityBranchList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_BRANCH_LIST category specify the list of monomers in a branched entity.

PdbxEntityBranchList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityBranchList

PdbxEntityBranchListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityBranchListBuilder

PdbxEntityFuncBindMode - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_FUNC_BIND_MODE category describe characteristics of protein oligonucleotide binding.

PdbxEntityFuncBindMode(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityFuncBindMode

PdbxEntityFuncBindModeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder

PdbxEntityFuncEnzyme - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_FUNC_ENZYME category describe characteristics of protein oligonucleotide binding in which the binding mode is enzymatic.

PdbxEntityFuncEnzyme(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityFuncEnzyme

PdbxEntityFuncEnzymeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncEnzymeBuilder

PdbxEntityFuncOther - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_FUNC_OTHER category describe characteristics of protein oligonucleotide binding in which the binding mode is not classified.

PdbxEntityFuncOther(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityFuncOther

PdbxEntityFuncOtherBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncOtherBuilder

PdbxEntityFuncRegulatory - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_FUNC_REGULATORY category describe characteristics of protein oligonucleotide binding in which the binding mode is regulatory.

PdbxEntityFuncRegulatory(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityFuncRegulatory

PdbxEntityFuncRegulatoryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncRegulatoryBuilder

PdbxEntityFuncStructural - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_FUNC_STRUCTURAL category describe characteristics of protein oligonucleotide binding in which the binding mode is structural.

PdbxEntityFuncStructural(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityFuncStructural

PdbxEntityFuncStructuralBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityFuncStructuralBuilder

PdbxEntityInstanceFeature - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_entity_instance_feature category records special features of selected entity instances.

PdbxEntityInstanceFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityInstanceFeature

PdbxEntityInstanceFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder

PdbxEntityName - Class in org.rcsb.cif.schema.mm

The PDBX_ENTITY_NAME records additional name information for each entity.

PdbxEntityName(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityName

PdbxEntityNameBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameBuilder

PdbxEntityNameInstance - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_NAME_INSTANCE category list names used to define entities with their associated database, entity, chain, and molecule identifiers.

PdbxEntityNameInstance(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityNameInstance

PdbxEntityNameInstanceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder

PdbxEntityNameTaxonomy - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_NAME_TAXONOMY category define the names and synonyms of the entity name taxonomy.

PdbxEntityNameTaxonomy(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomy

PdbxEntityNameTaxonomyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder

PdbxEntityNameTaxonomyTree - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_NAME_TAXONOMY_TREE category define the tree structure of the entity name taxonomy.

PdbxEntityNameTaxonomyTree(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityNameTaxonomyTree

PdbxEntityNameTaxonomyTreeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder

PdbxEntityNonpoly - Class in org.rcsb.cif.schema.mm

PdbxEntityNonpoly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityNonpoly

PdbxEntityNonpolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNonpolyBuilder

PdbxEntityPolyCompLinkList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_POLY_COMP_LINK_LIST category enumerate the the linkages between components within the polymer entity.

PdbxEntityPolyCompLinkList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList

PdbxEntityPolyCompLinkListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder

PdbxEntityPolyDomain - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_POLY_DOMAIN category specify domains of monomers within a polymer.

PdbxEntityPolyDomain(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityPolyDomain

PdbxEntityPolyDomainBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder

PdbxEntityPolyNaNonstandard - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_POLY_NA_NONSTANDARD category describe the nonstandard features of the nucleic acid polymer entities.

PdbxEntityPolyNaNonstandard(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityPolyNaNonstandard

PdbxEntityPolyNaNonstandardBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaNonstandardBuilder

PdbxEntityPolyNaType - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_POLY_NA_TYPE category describe type of nucleic acid polymer entities.

PdbxEntityPolyNaType(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityPolyNaType

PdbxEntityPolyNaTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyNaTypeBuilder

PdbxEntityPolyProteinClass - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_POLY_PROTEIN_CLASS category provides a top-level protein classification.

PdbxEntityPolyProteinClass(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityPolyProteinClass

PdbxEntityPolyProteinClassBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityPolyProteinClassBuilder

PdbxEntityProdProtocol - Class in org.rcsb.cif.schema.mm

This category contains descriptive protocols for the production of this entity.

PdbxEntityProdProtocol(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntityProdProtocol

PdbxEntityProdProtocolBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder

PdbxEntitySrcGenCharacter - Class in org.rcsb.cif.schema.mm

This category contains details of protein characterisation.

PdbxEntitySrcGenCharacter(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCharacter

PdbxEntitySrcGenCharacterBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder

PdbxEntitySrcGenChrom - Class in org.rcsb.cif.schema.mm

This category contains details for the chromatographic steps used in the purification of the protein.

PdbxEntitySrcGenChrom(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenChrom

PdbxEntitySrcGenChromBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder

PdbxEntitySrcGenClone - Class in org.rcsb.cif.schema.mm

This category contains details for the cloning steps used in the overall protein production process.

PdbxEntitySrcGenClone(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenClone

PdbxEntitySrcGenCloneBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder

PdbxEntitySrcGenCloneLigation - Class in org.rcsb.cif.schema.mm

This category contains details for the ligation-based cloning steps used in the overall protein production process.

PdbxEntitySrcGenCloneLigation(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneLigation

PdbxEntitySrcGenCloneLigationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder

PdbxEntitySrcGenCloneRecombination - Class in org.rcsb.cif.schema.mm

This category contains details for the recombination-based cloning steps used in the overall protein production process.

PdbxEntitySrcGenCloneRecombination(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenCloneRecombination

PdbxEntitySrcGenCloneRecombinationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder

PdbxEntitySrcGenDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTITY_SRC_GEN_DEPOSITOR_INFO category record details of the source from which the entity was obtained in cases where the source was genetically manipulated.

PdbxEntitySrcGenDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenDepositorInfo

PdbxEntitySrcGenDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder

PdbxEntitySrcGenExpress - Class in org.rcsb.cif.schema.mm

This category contains details for the EXPRESSION steps used in the overall protein production process.

PdbxEntitySrcGenExpress(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpress

PdbxEntitySrcGenExpressBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder

PdbxEntitySrcGenExpressTimepoint - Class in org.rcsb.cif.schema.mm

This category contains details for OD time series used to monitor a given EXPRESSION step used in the overall protein production process.

PdbxEntitySrcGenExpressTimepoint(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenExpressTimepoint

PdbxEntitySrcGenExpressTimepointBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder

PdbxEntitySrcGenFract - Class in org.rcsb.cif.schema.mm

This category contains details for the fraction steps used in the overall protein production process.

PdbxEntitySrcGenFract(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenFract

PdbxEntitySrcGenFractBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder

PdbxEntitySrcGenLysis - Class in org.rcsb.cif.schema.mm

This category contains details for the cell lysis steps used in the overall protein production process.

PdbxEntitySrcGenLysis(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenLysis

PdbxEntitySrcGenLysisBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder

PdbxEntitySrcGenProdDigest - Class in org.rcsb.cif.schema.mm

This category contains details for the DIGEST steps used in the overall protein production process.

PdbxEntitySrcGenProdDigest(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest

PdbxEntitySrcGenProdDigestBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder

PdbxEntitySrcGenProdOther - Class in org.rcsb.cif.schema.mm

This category contains details for process steps that are not explicitly catered for elsewhere.

PdbxEntitySrcGenProdOther(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOther

PdbxEntitySrcGenProdOtherBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder

PdbxEntitySrcGenProdOtherParameter - Class in org.rcsb.cif.schema.mm

This category contains parameters and values required to capture information about a particular process step

PdbxEntitySrcGenProdOtherParameter(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdOtherParameter

PdbxEntitySrcGenProdOtherParameterBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder

PdbxEntitySrcGenProdPcr - Class in org.rcsb.cif.schema.mm

This category contains details for the PCR steps used in the overall protein production process.

PdbxEntitySrcGenProdPcr(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdPcr

PdbxEntitySrcGenProdPcrBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder

PdbxEntitySrcGenProteolysis - Class in org.rcsb.cif.schema.mm

This category contains details for the protein purification tag removal steps used in the overall protein production process

PdbxEntitySrcGenProteolysis(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenProteolysis

PdbxEntitySrcGenProteolysisBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder

PdbxEntitySrcGenPure - Class in org.rcsb.cif.schema.mm

This category contains details for the final purified protein product.

PdbxEntitySrcGenPure(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenPure

PdbxEntitySrcGenPureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder

PdbxEntitySrcGenRefold - Class in org.rcsb.cif.schema.mm

This category contains details for the refolding steps used in the overall protein production process.

PdbxEntitySrcGenRefold(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcGenRefold

PdbxEntitySrcGenRefoldBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder

PdbxEntitySrcSyn - Class in org.rcsb.cif.schema.mm

The data items in category PDBX_ENTITY_SRC_SYN record the source details about chemically synthesized molecules.

PdbxEntitySrcSyn(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntitySrcSyn

PdbxEntitySrcSynBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntitySrcSynBuilder

PdbxEntryDetails - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ENTRY_DETAILS category provide additional details about this entry.

PdbxEntryDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxEntryDetails

PdbxEntryDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntryDetailsBuilder

PdbxExptlCrystalCryoTreatment - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_EXPTL_CRYSTAL_CRYO_TREATMENT category record details cryogenic treatments applied to this crystal.

PdbxExptlCrystalCryoTreatment(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxExptlCrystalCryoTreatment

PdbxExptlCrystalCryoTreatmentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder

PdbxExptlCrystalGrowComp - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_EXPTL_CRYSTAL_GROW_COMP category record details about the components of the solutions that were 'mixed' to produce the crystal.

PdbxExptlCrystalGrowComp(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowComp

PdbxExptlCrystalGrowCompBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder

PdbxExptlCrystalGrowSol - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_EXPTL_CRYSTAL_GROW_SOL category record details about the solutions that were 'mixed' to produce the crystal.

PdbxExptlCrystalGrowSol(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxExptlCrystalGrowSol

PdbxExptlCrystalGrowSolBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder

PdbxExptlPd - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_exptl_pd record information about powder sample preparations.

PdbxExptlPd(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxExptlPd

PdbxExptlPdBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxExptlPdBuilder

PdbxFamilyGroupIndex - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FAMILY_GROUP_INDEX category record the family membership in family groups.

PdbxFamilyGroupIndex(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFamilyGroupIndex

PdbxFamilyGroupIndexBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyGroupIndexBuilder

PdbxFamilyPrdAudit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FAMILY_PRD_AUDIT category records the status and tracking information for this family.

PdbxFamilyPrdAudit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFamilyPrdAudit

PdbxFamilyPrdAuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder

PdbxFeatureAssembly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FEATURE_ASSEMBLY category records information about properties pertaining to this structural assembly.

PdbxFeatureAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFeatureAssembly

PdbxFeatureAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder

PdbxFeatureDomain - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FEATURE_DOMAIN category records information about properties pertaining to this structure domain.

PdbxFeatureDomain(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFeatureDomain

PdbxFeatureDomainBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureDomainBuilder

PdbxFeatureEntry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FEATURE_ENTRY category records information about properties pertaining to this structure entry.

PdbxFeatureEntry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFeatureEntry

PdbxFeatureEntryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureEntryBuilder

PdbxFeatureMonomer - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FEATURE_MONOMER category records information about properties pertaining to particular monomers in this structure.

PdbxFeatureMonomer(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFeatureMonomer

PdbxFeatureMonomerBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureMonomerBuilder

PdbxFeatureSequenceRange - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_FEATURE_SEQUENCE_RANGE category records information about properties pertaining to this structure sequence_range.

PdbxFeatureSequenceRange(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxFeatureSequenceRange

PdbxFeatureSequenceRangeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder

PdbxHelicalSymmetry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_HELICAL_SYMMETRY category record details about the helical symmetry group associated with this entry.

PdbxHelicalSymmetry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxHelicalSymmetry

PdbxHelicalSymmetryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder

PdbxHelicalSymmetryDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_HELICAL_SYMMETRY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_HELICAL_SYMMETRY.

PdbxHelicalSymmetryDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxHelicalSymmetryDepositorInfo

PdbxHelicalSymmetryDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder

PdbxHybrid - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_HYBRID category are used to describe the chimeric characteristics of a DNA/RNA structure.

PdbxHybrid(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxHybrid

PdbxHybridBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxHybridBuilder

PdbxInhibitorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_INHIBITOR_INFO category are still used until the 'entity' categories are entered into the database, even though the inhibitor is repeated.

PdbxInhibitorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxInhibitorInfo

PdbxInhibitorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxInhibitorInfoBuilder

PdbxIonInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_ION_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

PdbxIonInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxIonInfo

PdbxIonInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxIonInfoBuilder

PdbxLinkedEntity - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_LINKED_ENTITY category record information about molecules composed of linked entities.

PdbxLinkedEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxLinkedEntity

PdbxLinkedEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityBuilder

PdbxLinkedEntityInstanceList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_LINKED_ENTITY_INSTANCE_LIST category identify instance molecules represented as linked entities within an entry.

PdbxLinkedEntityInstanceList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxLinkedEntityInstanceList

PdbxLinkedEntityInstanceListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder

PdbxLinkedEntityLinkList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_LINKED_ENTITY_LINK_LIST category give details about the linkages with molecules represented as linked entities.

PdbxLinkedEntityLinkList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList

PdbxLinkedEntityLinkListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder

PdbxLinkedEntityList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_LINKED_ENTITY_LIST category record the list of entity constituents for this molecule.

PdbxLinkedEntityList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxLinkedEntityList

PdbxLinkedEntityListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxLinkedEntityListBuilder

PdbxMissingAtomNonpoly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_MISSING_ATOM_NONPOLY category list the atoms missing in nonpolymer residues.

PdbxMissingAtomNonpoly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMissingAtomNonpoly

PdbxMissingAtomNonpolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder

PdbxMissingAtomPoly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_MISSING_ATOM_POLY category lists atoms missing in polymer residues.

PdbxMissingAtomPoly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMissingAtomPoly

PdbxMissingAtomPolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder

PdbxMissingResidueList - Class in org.rcsb.cif.schema.mm

Provides a place-holder for PDB REMARK 465 data.

PdbxMissingResidueList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMissingResidueList

PdbxMissingResidueListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMissingResidueListBuilder

PdbxMolecule - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_MOLECULE category identify reference molecules within a PDB entry.

PdbxMolecule(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMolecule

PdbxMoleculeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeBuilder

PdbxMoleculeFeatures - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_MOLECULE_FEATURES category record features of molecules within a PDB entry.

PdbxMoleculeFeatures(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMoleculeFeatures

PdbxMoleculeFeaturesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder

PdbxMoleculeFeaturesDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_MOLECULE_FEATURES_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_MOLECULE_FEATURES.

PdbxMoleculeFeaturesDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxMoleculeFeaturesDepositorInfo

PdbxMoleculeFeaturesDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder

PdbxNaStrandInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_NA_STRAND_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

PdbxNaStrandInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNaStrandInfo

PdbxNaStrandInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStrandInfoBuilder

PdbxNaStructKeywds - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_NA_STRUCT_KEYWDS category record give details about structural features of the NA.

PdbxNaStructKeywds(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNaStructKeywds

PdbxNaStructKeywdsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder

PdbxNmrAssignedChemShiftList - Class in org.rcsb.cif.schema.mm

Items in the assigned_chem_shift_list category provide information about a list of reported assigned chemical shift values.

PdbxNmrAssignedChemShiftList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrAssignedChemShiftList

PdbxNmrAssignedChemShiftListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder

PdbxNmrChemShiftExperiment - Class in org.rcsb.cif.schema.mm

Items in the chem_shift_experiment category provide pointers to the NMR experiments and samples used to collect the data for a set of reported assigned chemical shifts.

PdbxNmrChemShiftExperiment(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrChemShiftExperiment

PdbxNmrChemShiftExperimentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder

PdbxNmrChemShiftRef - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_chem_shift_ref category provide the chemical shift referencing values used in assigning the chemical shift positions for peaks in spectral peak lists and assigned atom chemical shifts.

PdbxNmrChemShiftRef(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrChemShiftRef

PdbxNmrChemShiftRefBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder

PdbxNmrChemShiftReference - Class in org.rcsb.cif.schema.mm

Items in the chem_shift_reference category define a set of chemical shift referencing parameters.

PdbxNmrChemShiftReference(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrChemShiftReference

PdbxNmrChemShiftReferenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder

PdbxNmrChemShiftSoftware - Class in org.rcsb.cif.schema.mm

Items in the chem_shift_software category provide pointers to the software category and methods category.

PdbxNmrChemShiftSoftware(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrChemShiftSoftware

PdbxNmrChemShiftSoftwareBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder

PdbxNmrComputing - Class in org.rcsb.cif.schema.mm

The table in this section is used to describe the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

PdbxNmrComputing(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrComputing

PdbxNmrComputingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrComputingBuilder

PdbxNmrConstraintFile - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_constraint_file category record the name of the constraint file, the software used to calculate conformers with the constraint file, and the characteristics of the constraints in the constraint file.

PdbxNmrConstraintFile(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrConstraintFile

PdbxNmrConstraintFileBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder

PdbxNmrConstraints - Class in org.rcsb.cif.schema.mm

This section provides a tabulation of constraint data.

PdbxNmrConstraints(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrConstraints

PdbxNmrConstraintsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrConstraintsBuilder

PdbxNmrDetails - Class in org.rcsb.cif.schema.mm

Experimental details of the NMR study that have not been described elsewhere in this deposition.

PdbxNmrDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrDetails

PdbxNmrDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrDetailsBuilder

PdbxNmrEnsemble - Class in org.rcsb.cif.schema.mm

This category contains the information that describes the ensemble of deposited structures.

PdbxNmrEnsemble(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrEnsemble

PdbxNmrEnsembleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleBuilder

PdbxNmrEnsembleRms - Class in org.rcsb.cif.schema.mm

Structural statistics are derived from molecular dynamics and simulated annealing programs.

PdbxNmrEnsembleRms(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrEnsembleRms

PdbxNmrEnsembleRmsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder

PdbxNmrExptl - Class in org.rcsb.cif.schema.mm

In this section, enter information on those experiments that were used to generate constraint data.

PdbxNmrExptl(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrExptl

PdbxNmrExptlBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlBuilder

PdbxNmrExptlSample - Class in org.rcsb.cif.schema.mm

The chemical constituents of each NMR sample.

PdbxNmrExptlSample(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrExptlSample

PdbxNmrExptlSampleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder

PdbxNmrExptlSampleConditions - Class in org.rcsb.cif.schema.mm

The experimental conditions used to for each sample.

PdbxNmrExptlSampleConditions(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrExptlSampleConditions

PdbxNmrExptlSampleConditionsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder

PdbxNmrForceConstants - Class in org.rcsb.cif.schema.mm

The final force constants, including units, employed for the various experimental constraints, covalent geometry constraints, and the non-bonded interaction terms in the target function used for simulated annealing.

PdbxNmrForceConstants(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrForceConstants

PdbxNmrForceConstantsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder

PdbxNmrRefine - Class in org.rcsb.cif.schema.mm

Describe the method and details of the refinement of the deposited structure.

PdbxNmrRefine(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrRefine

PdbxNmrRefineBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRefineBuilder

PdbxNmrRepresentative - Class in org.rcsb.cif.schema.mm

An average structure is often calculated in addition to the ensemble, or one of the ensemble is selected as a representative structure.

PdbxNmrRepresentative(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrRepresentative

PdbxNmrRepresentativeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder

PdbxNmrSampleDetails - Class in org.rcsb.cif.schema.mm

Complete description of each NMR sample, including the solvent system used.

PdbxNmrSampleDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSampleDetails

PdbxNmrSampleDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder

PdbxNmrSoftware - Class in org.rcsb.cif.schema.mm

Description of the software that was used for data collection, data processing, data analysis, structure calculations and refinement.

PdbxNmrSoftware(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSoftware

PdbxNmrSoftwareBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareBuilder

PdbxNmrSoftwareTask - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_software_task category provide information about software workflow in the NMR experiment.

PdbxNmrSoftwareTask(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSoftwareTask

PdbxNmrSoftwareTaskBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder

PdbxNmrSpectralDim - Class in org.rcsb.cif.schema.mm

Items in the spectral_dim category describe the parameters of each dimension in the NMR experiment used to generate the spectral peak list.

PdbxNmrSpectralDim(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSpectralDim

PdbxNmrSpectralDimBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder

PdbxNmrSpectralPeakList - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_spectral_peak_list category provide information about a list of reported spectral peak characteristic values.

PdbxNmrSpectralPeakList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakList

PdbxNmrSpectralPeakListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder

PdbxNmrSpectralPeakSoftware - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_spectral_peak_software category provide pointers to the software category and methods category where descriptions of software applications and methods can be found.

PdbxNmrSpectralPeakSoftware(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSpectralPeakSoftware

PdbxNmrSpectralPeakSoftwareBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder

PdbxNmrSpectrometer - Class in org.rcsb.cif.schema.mm

The details about each spectrometer used to collect data for this deposition.

PdbxNmrSpectrometer(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSpectrometer

PdbxNmrSpectrometerBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder

PdbxNmrSystematicChemShiftOffset - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_systematic_chem_shift_offset category define chemical shift offsets that systematically affect all chemical shifts in a set of assigned chemical shifts for a specific nuclei.

PdbxNmrSystematicChemShiftOffset(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrSystematicChemShiftOffset

PdbxNmrSystematicChemShiftOffsetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder

PdbxNmrUpload - Class in org.rcsb.cif.schema.mm

Items in the pdbx_nmr_upload category provide information about the data files uploaded by a depositor using the deposition system.

PdbxNmrUpload(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNmrUpload

PdbxNmrUploadBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNmrUploadBuilder

PdbxNonpolyScheme - Class in org.rcsb.cif.schema.mm

The PDBX_NONPOLY_SCHEME category provides residue level nomenclature mapping for non-polymer entities.

PdbxNonpolyScheme(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNonpolyScheme

PdbxNonpolySchemeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonpolySchemeBuilder

PdbxNonstandardList - Class in org.rcsb.cif.schema.mm

The information in this category is exclusively used to store the HET records of a PDB file.

PdbxNonstandardList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxNonstandardList

PdbxNonstandardListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxNonstandardListBuilder

PdbxPdbCompnd - Class in org.rcsb.cif.schema.mm

This is a place holder for the PDB COMPND.

PdbxPdbCompnd(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPdbCompnd

PdbxPdbCompndBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbCompndBuilder

PdbxPdbSource - Class in org.rcsb.cif.schema.mm

This is a place holder for the PDB SOURCE.

PdbxPdbSource(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPdbSource

PdbxPdbSourceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPdbSourceBuilder

PdbxPhasingDm - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PHASING_DM category record details about density modification

PdbxPhasingDm(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingDm

PdbxPhasingDmBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmBuilder

PdbxPhasingDmShell - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PHASING_DM_SHELL category record details about density modification in resolution shell.

PdbxPhasingDmShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingDmShell

PdbxPhasingDmShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingDmShellBuilder

PdbxPhasingMADSet - Class in org.rcsb.cif.schema.mm

Record details about each phasing set: (Note: the phasing set is different from data set.

PdbxPhasingMADSet(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingMADSet

PdbxPhasingMADSetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetBuilder

PdbxPhasingMADSetShell - Class in org.rcsb.cif.schema.mm

The same as category pdbx_phasing_MAD_set, but broken into shells.

PdbxPhasingMADSetShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingMADSetShell

PdbxPhasingMADSetShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder

PdbxPhasingMADSetSite - Class in org.rcsb.cif.schema.mm

record the details (coordinates etc.) of anomalous scatters.

PdbxPhasingMADSetSite(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingMADSetSite

PdbxPhasingMADSetSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder

PdbxPhasingMADShell - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PHASING_MAD_SHELL category record details about the phasing of the structure, when methods involving multiple anomalous dispersion techniques are involved (note: the values are overall, but broken down into shells of resolution)

PdbxPhasingMADShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingMADShell

PdbxPhasingMADShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMADShellBuilder

PdbxPhasingMR - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PHASING_MR category record details about molecular replacement.

PdbxPhasingMR(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPhasingMR

PdbxPhasingMRBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPhasingMRBuilder

PdbxPointSymmetry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_POINT_SYMMETRY category record details about the point symmetry group associated with this entry.

PdbxPointSymmetry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPointSymmetry

PdbxPointSymmetryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryBuilder

PdbxPointSymmetryDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_POINT_SYMMETRY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_POINT_SYMMETRY.

PdbxPointSymmetryDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPointSymmetryDepositorInfo

PdbxPointSymmetryDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder

PdbxPolySeqScheme - Class in org.rcsb.cif.schema.mm

The PDBX_POLY_SEQ_SCHEME category provides residue level nomenclature mapping for polymer entities.

PdbxPolySeqScheme(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPolySeqScheme

PdbxPolySeqSchemeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder

PdbxPostProcessDetails - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_POST_PROCESS_DETAILS identify problems or errors encountered in the post-processing of this entry.

PdbxPostProcessDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPostProcessDetails

PdbxPostProcessDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder

PdbxPostProcessStatus - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_POST_PROCESS_DETAILS record the status of post-processed entries.

PdbxPostProcessStatus(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPostProcessStatus

PdbxPostProcessStatusBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPostProcessStatusBuilder

PdbxPrdAudit - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PRD_AUDIT category records the status and tracking information for this molecule.

PdbxPrdAudit(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPrdAudit

PdbxPrdAuditBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrdAuditBuilder

PdbxPrereleaseSeq - Class in org.rcsb.cif.schema.mm

This category provides a placeholder for pre-release sequence information.

PdbxPrereleaseSeq(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxPrereleaseSeq

PdbxPrereleaseSeqBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxPrereleaseSeqBuilder

PdbxProteinInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_PROTEIN_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

PdbxProteinInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxProteinInfo

PdbxProteinInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxProteinInfoBuilder

PdbxReferenceEntityLink - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_LINK category give details about the linkages between entities within reference molecules.

PdbxReferenceEntityLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityLink

PdbxReferenceEntityLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder

PdbxReferenceEntityList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_LIST category record the list of entities within each reference molecule.

PdbxReferenceEntityList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityList

PdbxReferenceEntityListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityListBuilder

PdbxReferenceEntityNonpoly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_NONPOLY category record the list of entities within each reference molecule.

PdbxReferenceEntityNonpoly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityNonpoly

PdbxReferenceEntityNonpolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder

PdbxReferenceEntityPoly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_POLY category record details about the polymer, such as the type of the polymer, the number of monomers and whether it has nonstandard features.

PdbxReferenceEntityPoly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityPoly

PdbxReferenceEntityPolyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder

PdbxReferenceEntityPolyLink - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_POLY_LINK category give details about polymer linkages including both standard and non-standard linkages between polymer componnents.

PdbxReferenceEntityPolyLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolyLink

PdbxReferenceEntityPolyLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder

PdbxReferenceEntityPolySeq - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_POLY_SEQ category specify the sequence of monomers in a polymer.

PdbxReferenceEntityPolySeq(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntityPolySeq

PdbxReferenceEntityPolySeqBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder

PdbxReferenceEntitySequence - Class in org.rcsb.cif.schema.mm

Additional features associated with the reference entity.

PdbxReferenceEntitySequence(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntitySequence

PdbxReferenceEntitySequenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder

PdbxReferenceEntitySrcNat - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_SRC_NAT category record details of the source from which the entity was obtained.

PdbxReferenceEntitySrcNat(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntitySrcNat

PdbxReferenceEntitySrcNatBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder

PdbxReferenceEntitySubcomponents - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_ENTITY_SUBCOMPONENTS category records subcomponent sequence from which this entity could be built.

PdbxReferenceEntitySubcomponents(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceEntitySubcomponents

PdbxReferenceEntitySubcomponentsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder

PdbxReferenceLinkedEntity - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_reference_linked_entity category describe common observed interaction patterns within linked entities.

PdbxReferenceLinkedEntity(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntity

PdbxReferenceLinkedEntityBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder

PdbxReferenceLinkedEntityCompLink - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_reference_linked_entity_comp_link category enumerate inter-entity linkages between the components of common observed interaction patterns described in the pdbx_reference_linked_entity category.

PdbxReferenceLinkedEntityCompLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink

PdbxReferenceLinkedEntityCompLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder

PdbxReferenceLinkedEntityCompList - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_reference_linked_entity_comp_list category lists the constituents of common observed interaction patterns described in the pdbx_reference_linked_entity category.

PdbxReferenceLinkedEntityCompList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompList

PdbxReferenceLinkedEntityCompListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder

PdbxReferenceLinkedEntityLink - Class in org.rcsb.cif.schema.mm

Data items in the pdbx_reference_linked_entity_link category enumerate linkages between the entities in common observed interaction patterns described in the pdbx_reference_linked_entity category.

PdbxReferenceLinkedEntityLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink

PdbxReferenceLinkedEntityLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder

PdbxReferenceMolecule - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE category record reference information about small polymer molecules.

PdbxReferenceMolecule(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMolecule

PdbxReferenceMoleculeAnnotation - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_ANNOTATION category specify additional annotation relevant to the molecular entities.

PdbxReferenceMoleculeAnnotation(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeAnnotation

PdbxReferenceMoleculeAnnotationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder

PdbxReferenceMoleculeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder

PdbxReferenceMoleculeDetails - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_DETAILS category records textual details about small polymer molecules.

PdbxReferenceMoleculeDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeDetails

PdbxReferenceMoleculeDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder

PdbxReferenceMoleculeFamily - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_FAMILY category identify entity families.

PdbxReferenceMoleculeFamily(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFamily

PdbxReferenceMoleculeFamilyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder

PdbxReferenceMoleculeFeatures - Class in org.rcsb.cif.schema.mm

Additional features associated with the reference entity.

PdbxReferenceMoleculeFeatures(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeFeatures

PdbxReferenceMoleculeFeaturesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder

PdbxReferenceMoleculeList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_LIST category record reference information about small polymer molecules.

PdbxReferenceMoleculeList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeList

PdbxReferenceMoleculeListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeListBuilder

PdbxReferenceMoleculeRelatedStructures - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_RELATED_STRUCTURES category record details of the structural examples in related databases for this entity.

PdbxReferenceMoleculeRelatedStructures(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures

PdbxReferenceMoleculeRelatedStructuresBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder

PdbxReferenceMoleculeSynonyms - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_MOLECULE_SYNONYMS category records synonym names for reference entities.

PdbxReferenceMoleculeSynonyms(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferenceMoleculeSynonyms

PdbxReferenceMoleculeSynonymsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder

PdbxReferencePublicationList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFERENCE_PUBLICATION_LIST hold reference information related to PDB citation data.

PdbxReferencePublicationList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReferencePublicationList

PdbxReferencePublicationListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReferencePublicationListBuilder

PdbxRefine - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFINE category record details about additional structure refinement parameters which are needed to complete legacy REMARK 3 refinement templates in PDB format files.

PdbxRefine(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefine

PdbxRefineAuxFile - Class in org.rcsb.cif.schema.mm

Auxilary parameter and topology files used in refinement.

PdbxRefineAuxFile(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefineAuxFile

PdbxRefineAuxFileBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineAuxFileBuilder

PdbxRefineBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineBuilder

PdbxRefineComponent - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFINE_COMPONENT category record statistics of the final model relative to the density map.

PdbxRefineComponent(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefineComponent

PdbxRefineComponentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineComponentBuilder

PdbxRefineLsRestrNcs - Class in org.rcsb.cif.schema.mm

Holds details of NCS restraints in cases where multiple conditions are provided for each domain.

PdbxRefineLsRestrNcs(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefineLsRestrNcs

PdbxRefineLsRestrNcsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder

PdbxRefineTls - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_TLS category record details about TLS parameters used in structure refinement.

PdbxRefineTls(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefineTls

PdbxRefineTlsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsBuilder

PdbxRefineTlsGroup - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REFINE_TLS_GROUP category record details about a fragment of a TLS group.

PdbxRefineTlsGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRefineTlsGroup

PdbxRefineTlsGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder

PdbxReflnsTwin - Class in org.rcsb.cif.schema.mm

Details decribing crystallographic twinning.

PdbxReflnsTwin(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReflnsTwin

PdbxReflnsTwinBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReflnsTwinBuilder

PdbxRelatedExpDataSet - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_RELATED_DATA_SET category record references to experimental data sets related to the entry.

PdbxRelatedExpDataSet(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRelatedExpDataSet

PdbxRelatedExpDataSetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder

PdbxRemediationAtomSiteMapping - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_REMEDIATION_ATOM_SITE_MAPPING category records mapping information between selected molecular entities that have been chemically redefined.

PdbxRemediationAtomSiteMapping(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping

PdbxRemediationAtomSiteMappingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder

PdbxReRefinement - Class in org.rcsb.cif.schema.mm

Describes the origin of the experimental data used in this entry.

PdbxReRefinement(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxReRefinement

PdbxReRefinementBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxReRefinementBuilder

PdbxRmchOutlier - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_RMCH_OUTLIER category list the residues with torsion angles outside the expected Ramachandran regions.

PdbxRmchOutlier(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRmchOutlier

PdbxRmchOutlierBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmchOutlierBuilder

PdbxRmsDevsCovalent - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_RMS_DEVS_COVALENT record the summary RMS deviations for nucleic acid covalent geometry relative to small molecule crystal standards.

PdbxRmsDevsCovalent(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRmsDevsCovalent

PdbxRmsDevsCovalentBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder

PdbxRmsDevsCovByMonomer - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_RMS_DEVS_COV_BY_MONOMER record the RMS deviations covalent geometry for each momoner relative to small molecule crystal standards.

PdbxRmsDevsCovByMonomer(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRmsDevsCovByMonomer

PdbxRmsDevsCovByMonomerBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder

PdbxRobotSystem - Class in org.rcsb.cif.schema.mm

The details about each robotic system used to collect data for this project.

PdbxRobotSystem(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxRobotSystem

PdbxRobotSystemBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxRobotSystemBuilder

PdbxSeqMapDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SEQ_MAP_DEPOSITOR_INFO record the details about the mapping sample and coordinate sequences.

PdbxSeqMapDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSeqMapDepositorInfo

PdbxSeqMapDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder

PdbxSequenceAnnotation - Class in org.rcsb.cif.schema.mm

PDBX_SEQUENCE_ANNOTATION holds internal details about molecular sequences described in the context of PDB chains.

PdbxSequenceAnnotation(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSequenceAnnotation

PdbxSequenceAnnotationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceAnnotationBuilder

PdbxSequencePattern - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SEQUENCE_PATTERN category record the number of occurences of common step sequence patterns (e.g.

PdbxSequencePattern(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSequencePattern

PdbxSequencePatternBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequencePatternBuilder

PdbxSequenceRange - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SEQUENCE_RANGE category identify the beginning and ending points of polypeptide sequence segments.

PdbxSequenceRange(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSequenceRange

PdbxSequenceRangeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSequenceRangeBuilder

PdbxSerialCrystallographyDataReduction - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_DATA_REDUCTION category record details about data processing that are unique to XFEL experiments.

PdbxSerialCrystallographyDataReduction(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyDataReduction

PdbxSerialCrystallographyDataReductionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder

PdbxSerialCrystallographyMeasurement - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_MEASUREMENT category record details the beam that is impinging on the sample

PdbxSerialCrystallographyMeasurement(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSerialCrystallographyMeasurement

PdbxSerialCrystallographyMeasurementBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder

PdbxSerialCrystallographySampleDelivery - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY category record general details about the sample delivery

PdbxSerialCrystallographySampleDelivery(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDelivery

PdbxSerialCrystallographySampleDeliveryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder

PdbxSerialCrystallographySampleDeliveryFixedTarget - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY_FIXED_TARGET category record details about sample delivery using a fixed taget.

PdbxSerialCrystallographySampleDeliveryFixedTarget(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryFixedTarget

PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder

PdbxSerialCrystallographySampleDeliveryInjection - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SERIAL_CRYSTALLOGRAPHY_SAMPLE_DELIVERY_INJECTION category record details about sample delivery by injection

PdbxSerialCrystallographySampleDeliveryInjection(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSerialCrystallographySampleDeliveryInjection

PdbxSerialCrystallographySampleDeliveryInjectionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder

PdbxSGProject - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_CONTACT_AUTHOR category record details about the Structural Genomics Project and name and initials for each Center.

PdbxSGProject(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSGProject

PdbxSGProjectBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSGProjectBuilder

PdbxSolnScatter - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SOLN_SCATTER category record details about a solution scattering experiment

PdbxSolnScatter(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSolnScatter

PdbxSolnScatterBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterBuilder

PdbxSolnScatterModel - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SOLN_SCATTER_MODEL category record details about the homology model fitting to the solution scatter data.

PdbxSolnScatterModel(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSolnScatterModel

PdbxSolnScatterModelBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolnScatterModelBuilder

PdbxSolventAtomSiteMapping - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SOLVENT_ATOM_SITE_MAPPING category records mapping information between solvent atoms before and after symmetry repositioning.

PdbxSolventAtomSiteMapping(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSolventAtomSiteMapping

PdbxSolventAtomSiteMappingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder

PdbxSolventInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SOLVENT_INFO category are still used until the 'entity' categories are entered into the database, even though the information is repeated.

PdbxSolventInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSolventInfo

PdbxSolventInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSolventInfoBuilder

PdbxSource - Class in org.rcsb.cif.schema.mm

Data item will still be used until the ENTITY category is fully adopted by NDBQuery.

PdbxSource(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSource

PdbxSourceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSourceBuilder

PdbxStereochemistry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STEREOCHEMISTRY identify chiral centers and associated chiral volumes.

PdbxStereochemistry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStereochemistry

PdbxStereochemistryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStereochemistryBuilder

PdbxStructAssembly - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASSEMBLY category record details about the structural elements that form macromolecular assemblies.

PdbxStructAssembly(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssembly

PdbxStructAssemblyAuthClassification - Class in org.rcsb.cif.schema.mm

Provides reason a particular assembly in pdbx_struct_assembly is of interest.

PdbxStructAssemblyAuthClassification(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthClassification

PdbxStructAssemblyAuthClassificationBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder

PdbxStructAssemblyAuthEvidence - Class in org.rcsb.cif.schema.mm

Provides author supplied evidentiary support for assemblies in pdbx_struct_assembly.

PdbxStructAssemblyAuthEvidence(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidence

PdbxStructAssemblyAuthEvidenceBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder

PdbxStructAssemblyAuthEvidenceDepositorInfo - Class in org.rcsb.cif.schema.mm

Provides author supplied evidentiary support for assemblies in pdbx_struct_assembly.

PdbxStructAssemblyAuthEvidenceDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyAuthEvidenceDepositorInfo

PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder

PdbxStructAssemblyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyBuilder

PdbxStructAssemblyDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASSEMBLY_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY.

PdbxStructAssemblyDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyDepositorInfo

PdbxStructAssemblyDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder

PdbxStructAssemblyGen - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASSEMBLY_GEN category record details about the generation of each macromolecular assemblies.

PdbxStructAssemblyGen(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyGen

PdbxStructAssemblyGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder

PdbxStructAssemblyGenDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASSEMBLY_GEN_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY_GEN.

PdbxStructAssemblyGenDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyGenDepositorInfo

PdbxStructAssemblyGenDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder

PdbxStructAssemblyProp - Class in org.rcsb.cif.schema.mm

Properties and features of structural assemblies.

PdbxStructAssemblyProp(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyProp

PdbxStructAssemblyPropBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder

PdbxStructAssemblyPropDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASSEMBLY_PROP_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_ASSEMBLY_PROP.

PdbxStructAssemblyPropDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAssemblyPropDepositorInfo

PdbxStructAssemblyPropDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder

PdbxStructAsymGen - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ASYM_GEN category record details about the generation of the crystallographic asymmetric unit.

PdbxStructAsymGen(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructAsymGen

PdbxStructAsymGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructAsymGenBuilder

PdbxStructBiolFunc - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_BIOL_FUNC category record details about the function of a particular biological assembly.

PdbxStructBiolFunc(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructBiolFunc

PdbxStructBiolFuncBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructBiolFuncBuilder

PdbxStructChemCompDiagnostics - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_CHEM_COMP_DIAGNOSTICS category provides structural diagnostics in chemical components instances.

PdbxStructChemCompDiagnostics(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructChemCompDiagnostics

PdbxStructChemCompDiagnosticsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder

PdbxStructChemCompFeature - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_CHEM_COMP_FEATURE category provides structural annotations in chemical components instances.

PdbxStructChemCompFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructChemCompFeature

PdbxStructChemCompFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder

PdbxStructConnAngle - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_CONN_ANGLE category record the angles in connections between portions of the structure.

PdbxStructConnAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructConnAngle

PdbxStructConnAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructConnAngleBuilder

PdbxStructEntityInst - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_ENTITY_INST category record details about the structural elements in the deposited entry.

PdbxStructEntityInst(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructEntityInst

PdbxStructEntityInstBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructEntityInstBuilder

PdbxStructGroupComponentRange - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_GROUP_COMPONENT_RANGE category define a structural group as a continuous span chemical components.

PdbxStructGroupComponentRange(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructGroupComponentRange

PdbxStructGroupComponentRangeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder

PdbxStructGroupComponents - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_GROUP_COMPONENTS category list component-level group assignments within the entry.

PdbxStructGroupComponents(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructGroupComponents

PdbxStructGroupComponentsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder

PdbxStructGroupList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_GROUP_LIST define groups of related components or atoms.

PdbxStructGroupList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructGroupList

PdbxStructGroupListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructGroupListBuilder

PdbxStructInfo - Class in org.rcsb.cif.schema.mm

Special features of this structural entry.

PdbxStructInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructInfo

PdbxStructInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructInfoBuilder

PdbxStructLegacyOperList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_LEGACY_OPER_LIST category describe Cartesian rotation and translation operations required to generate or transform the coordinates deposited with this entry.

PdbxStructLegacyOperList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructLegacyOperList

PdbxStructLegacyOperListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder

PdbxStructLink - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_LINK category record details about covalent linkages in the structure.

PdbxStructLink(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructLink

PdbxStructLinkBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructLinkBuilder

PdbxStructModResidue - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_MOD_RESIDUE category list the modified polymer components in the entry and provide some details describing the nature of the modification.

PdbxStructModResidue(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructModResidue

PdbxStructModResidueBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructModResidueBuilder

PdbxStructMsymGen - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_MSYM_GEN category record details about the generation of the minimal asymmetric unit.

PdbxStructMsymGen(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructMsymGen

PdbxStructMsymGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructMsymGenBuilder

PdbxStructNcsVirusGen - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_NCS_VIRUS_GEN category record details about the generation of virus structures from NCS matrix operators.

PdbxStructNcsVirusGen(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructNcsVirusGen

PdbxStructNcsVirusGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder

PdbxStructOperList - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_OPER_LIST category describe Cartesian rotation and translation operations required to generate or transform the coordinates deposited with this entry.

PdbxStructOperList(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructOperList

PdbxStructOperListBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListBuilder

PdbxStructOperListDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_OPER_LIST_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory PDBX_STRUCT_OPER_LIST.

PdbxStructOperListDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructOperListDepositorInfo

PdbxStructOperListDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder

PdbxStructPackGen - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_PACK_GEN category record details about the generation of the packing picture(s).

PdbxStructPackGen(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructPackGen

PdbxStructPackGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructPackGenBuilder

PdbxStructRefSeqDeletion - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_INSERTION category annotate deletions in the sequence of the entity described in the referenced database entry.

PdbxStructRefSeqDeletion(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqDeletion

PdbxStructRefSeqDeletionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder

PdbxStructRefSeqDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory STRUCT_REF_SEQ.

PdbxStructRefSeqDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqDepositorInfo

PdbxStructRefSeqDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder

PdbxStructRefSeqDifDepositorInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_DIF_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory STRUCT_REF_SEQ_DIF.

PdbxStructRefSeqDifDepositorInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo

PdbxStructRefSeqDifDepositorInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder

PdbxStructRefSeqFeature - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_FEATURE category provide a mechanism for identifying and annotating sequence features.

PdbxStructRefSeqFeature(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeature

PdbxStructRefSeqFeatureBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder

PdbxStructRefSeqFeatureProp - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_FEATURE_PROP category provide a mechanism for identifying and annotating properties of sequence features.

PdbxStructRefSeqFeatureProp(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqFeatureProp

PdbxStructRefSeqFeaturePropBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder

PdbxStructRefSeqInsertion - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_REF_SEQ_INSERTION category annotate insertions in the sequence of the entity described in the referenced database entry.

PdbxStructRefSeqInsertion(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructRefSeqInsertion

PdbxStructRefSeqInsertionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder

PdbxStructSheetHbond - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_SHEET_HBOND category record details about the hydrogen bonding between residue ranges in a beta sheet.

PdbxStructSheetHbond(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructSheetHbond

PdbxStructSheetHbondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSheetHbondBuilder

PdbxStructSpecialSymmetry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_STRUCT_SPECIAL_SYMMETRY category list the molecular components that lie on special symmetry positions.

PdbxStructSpecialSymmetry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxStructSpecialSymmetry

PdbxStructSpecialSymmetryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder

PdbxSugarPhosphateGeometry - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SUGAR_PHOSPHATE_GEOMETRY record the RMS deviations covalent geometry for each momoner relative to small molecule crystal standards.

PdbxSugarPhosphateGeometry(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSugarPhosphateGeometry

PdbxSugarPhosphateGeometryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder

PdbxSummaryFlags - Class in org.rcsb.cif.schema.mm

Container category for a list of feature flags associated with each structure entry.

PdbxSummaryFlags(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSummaryFlags

PdbxSummaryFlagsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSummaryFlagsBuilder

PdbxSupportingExpDataSet - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_SUPPORTING_EXP_DATA_SET category record to experimental data set dependencies for this entry.

PdbxSupportingExpDataSet(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxSupportingExpDataSet

PdbxSupportingExpDataSetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder

PdbxTableinfo - Class in org.rcsb.cif.schema.mm

PdbxTableinfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxTableinfo

PdbxTableinfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTableinfoBuilder

PdbxTrnaInfo - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_TRNA_INFO category are still used until the 'entity' categories are entered into the database, even though the T-RNA is repeated.

PdbxTrnaInfo(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxTrnaInfo

PdbxTrnaInfoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxTrnaInfoBuilder

PdbxUnobsOrZeroOccAtoms - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS category list the atoms within the entry that are either unobserved or have zero occupancy/

PdbxUnobsOrZeroOccAtoms(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccAtoms

PdbxUnobsOrZeroOccAtomsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder

PdbxUnobsOrZeroOccResidues - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_UNOBS_OR_ZERO_OCC_RESIDUES category list the residues within the entry that are not observed or have zero occupancy.

PdbxUnobsOrZeroOccResidues(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxUnobsOrZeroOccResidues

PdbxUnobsOrZeroOccResiduesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder

PdbxUnpair - Class in org.rcsb.cif.schema.mm

These records give information about residues which do not pair (h-bond) in the asymmetric unit.

PdbxUnpair(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxUnpair

PdbxUnpairBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxUnpairBuilder

PdbxValAngle - Class in org.rcsb.cif.schema.mm

The PDBX_VAL_ANGLE category lists the covalent bond angles in this entry deviating by greater than 6*sigma from standard values.

PdbxValAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValAngle

PdbxValAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValAngleBuilder

PdbxValBond - Class in org.rcsb.cif.schema.mm

The PDBX_VAL_BOND category lists the covalent bond angles in this entry deviating by greater than 6*sigma from standard values.

PdbxValBond(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValBond

PdbxValBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValBondBuilder

PdbxValChiral - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VAL_CHIRAL category list the atoms with nonstandard chiralities.

PdbxValChiral(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValChiral

PdbxValChiralBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValChiralBuilder

PdbxValContact - Class in org.rcsb.cif.schema.mm

The PDBX_VAL_CONTACT category lists non-bonded atoms within the assymetric unit of the entry that are in close contact.

PdbxValContact(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValContact

PdbxValContactBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValContactBuilder

PdbxValidateChiral - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_CHIRAL category list the residues that contain unexpected configuration of chiral centers.

PdbxValidateChiral(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateChiral

PdbxValidateChiralBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateChiralBuilder

PdbxValidateCloseContact - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_CLOSE_CONTACT category list the atoms within the entry that are in close contact with regard the distances expected from either covalent bonding or closest approach by van der Waals contacts.

PdbxValidateCloseContact(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateCloseContact

PdbxValidateCloseContactBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateCloseContactBuilder

PdbxValidateMainChainPlane - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_MAIN_CHAIN_PLANE category list the residues that contain unexpected deviations from planes for main chain atoms as defined by the improper torsion angle describing planarity: PLANARITY = C(i-1) - CA(i-1) - N(i) - O(i-1) ==> planar < 5 as a pseudo torsion

PdbxValidateMainChainPlane(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateMainChainPlane

PdbxValidateMainChainPlaneBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder

PdbxValidatePeptideOmega - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_PEPTIDE_OMEGA category list the residues that contain peptide bonds deviate significantly from both cis and trans conformation.

PdbxValidatePeptideOmega(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega

PdbxValidatePeptideOmegaBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder

PdbxValidatePlanes - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_PLANES category list the residues that contain unexpected deviations from planes centers.

PdbxValidatePlanes(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidatePlanes

PdbxValidatePlanesAtom - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_PLANES_ATOM category list the residues that contain unexpected deviations from planes centers.

PdbxValidatePlanesAtom(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom

PdbxValidatePlanesAtomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder

PdbxValidatePlanesBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePlanesBuilder

PdbxValidatePolymerLinkage - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_POLYMER_LINKAGE category list the polymer linkages within the entry that are outside of typlical covalent distances.

PdbxValidatePolymerLinkage(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidatePolymerLinkage

PdbxValidatePolymerLinkageBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder

PdbxValidateRmsdAngle - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_RMSD_ANGLE category list the the covalent bond angles found in an entry that have values which deviate from expected values by more than 6*rmsd for the particular entry from the expected standard value

PdbxValidateRmsdAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateRmsdAngle

PdbxValidateRmsdAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder

PdbxValidateRmsdBond - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_RMSD_BOND category list the covalent bonds that have values which deviate from expected values by more than 6*rmsd.

PdbxValidateRmsdBond(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateRmsdBond

PdbxValidateRmsdBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder

PdbxValidateSymmContact - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_SYMM_CONTACT category list the atoms within the entry that are in close contact with regard the distances expected from either covalent bonding or closest approach by van der Waals contacts.

PdbxValidateSymmContact(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateSymmContact

PdbxValidateSymmContactBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateSymmContactBuilder

PdbxValidateTorsion - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VALIDATE_TORSION category list the residues with torsion angles outside the expected ramachandran regions

PdbxValidateTorsion(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValidateTorsion

PdbxValidateTorsionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValidateTorsionBuilder

PdbxValSymContact - Class in org.rcsb.cif.schema.mm

The PDBX_VAL_SYM_CONTACT category lists symmetry related contacts amoung non-bonded atoms.

PdbxValSymContact(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxValSymContact

PdbxValSymContactBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxValSymContactBuilder

PdbxVersion - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VERSION category record details about the version of this entry.

PdbxVersion(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxVersion

PdbxVersionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVersionBuilder

PdbxViewCategory - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIEW_CATEGORY specify the categories belonging to a category view group.

PdbxViewCategory(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxViewCategory

PdbxViewCategoryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryBuilder

PdbxViewCategoryGroup - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIEW_CATEGORY_GROUP identify collections of related mmCIF categories.

PdbxViewCategoryGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxViewCategoryGroup

PdbxViewCategoryGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewCategoryGroupBuilder

PdbxViewItem - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIEW_ITEM specify the mmCIF data items belonging to a view category.

PdbxViewItem(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxViewItem

PdbxViewItemBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxViewItemBuilder

PdbxVirtualAngle - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIRTUAL_ANGLE category record details about the molecular virtual angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

PdbxVirtualAngle(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxVirtualAngle

PdbxVirtualAngleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualAngleBuilder

PdbxVirtualBond - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIRTUAL_BOND category record details about virtual bonds, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

PdbxVirtualBond(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxVirtualBond

PdbxVirtualBondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualBondBuilder

PdbxVirtualTorsion - Class in org.rcsb.cif.schema.mm

Data items in the PDBX_VIRTUAL_TORSION category record details about virtual torsion angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

PdbxVirtualTorsion(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxVirtualTorsion

PdbxVirtualTorsionBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxVirtualTorsionBuilder

PdbxXplorFile - Class in org.rcsb.cif.schema.mm

Parameter and topology files used in X-PLOR/CNS refinement.

PdbxXplorFile(Category) - Constructor for class org.rcsb.cif.schema.mm.PdbxXplorFile

PdbxXplorFileBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxXplorFileBuilder

Phasing - Class in org.rcsb.cif.schema.mm

Data items in the PHASING category record details about the phasing of the structure, listing the various methods used in the phasing process.

Phasing(Category) - Constructor for class org.rcsb.cif.schema.mm.Phasing

PhasingAveraging - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_AVERAGING category record details about the phasing of the structure where methods involving averaging of multiple observations of the molecule in the asymmetric unit are involved.

PhasingAveraging(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingAveraging

PhasingAveragingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingAveragingBuilder

PhasingBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingBuilder

PhasingIsomorphous - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_ISOMORPHOUS category record details about the phasing of the structure where a model isomorphous to the structure being phased was used to generate the initial phases.

PhasingIsomorphous(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingIsomorphous

PhasingIsomorphousBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingIsomorphousBuilder

PhasingMAD - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MAD category record details about the phasing of the structure where methods involving multiple-wavelength anomalous-dispersion techniques are involved.

PhasingMAD(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMAD

PhasingMADBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADBuilder

PhasingMADClust - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MAD_CLUST category record details about a cluster of experiments that contributed to the generation of a set of phases.

PhasingMADClust(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMADClust

PhasingMADClustBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADClustBuilder

PhasingMADExpt - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MAD_EXPT category record details about a MAD phasing experiment, such as the number of experiments that were clustered together to produce a set of phases or the statistics for those phases.

PhasingMADExpt(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMADExpt

PhasingMADExptBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADExptBuilder

PhasingMADRatio - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MAD_RATIO category record the ratios of phasing statistics between pairs of data sets in a MAD phasing experiment, in given shells of resolution.

PhasingMADRatio(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMADRatio

PhasingMADRatioBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADRatioBuilder

PhasingMADSet - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MAD_SET category record details about the individual data sets used in a MAD phasing experiment.

PhasingMADSet(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMADSet

PhasingMADSetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMADSetBuilder

PhasingMIR - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR category record details about the phasing of the structure where methods involving isomorphous replacement are involved.

PhasingMIR(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIR

PhasingMIRBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRBuilder

PhasingMIRDer - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR_DER category record details about individual derivatives used in the phasing of the structure when methods involving isomorphous replacement are involved.

PhasingMIRDer(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIRDer

PhasingMIRDerBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerBuilder

PhasingMIRDerRefln - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR_DER_REFLN category record details about the calculated structure factors obtained in an MIR phasing experiment.

PhasingMIRDerRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIRDerRefln

PhasingMIRDerReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerReflnBuilder

PhasingMIRDerShell - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR_DER_SHELL category record statistics, broken down into shells of resolution, for an MIR phasing experiment.

PhasingMIRDerShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIRDerShell

PhasingMIRDerShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerShellBuilder

PhasingMIRDerSite - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR_DER_SITE category record details about the heavy-atom sites in an MIR phasing experiment.

PhasingMIRDerSite(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIRDerSite

PhasingMIRDerSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRDerSiteBuilder

PhasingMIRShell - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_MIR_SHELL category record statistics for an isomorphous replacement phasing experiment.broken down into shells of resolution.

PhasingMIRShell(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingMIRShell

PhasingMIRShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingMIRShellBuilder

PhasingSet - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_SET category record details about the data sets used in a phasing experiment.

PhasingSet(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingSet

PhasingSetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetBuilder

PhasingSetRefln - Class in org.rcsb.cif.schema.mm

Data items in the PHASING_SET_REFLN category record the values of the measured structure factors used in a phasing experiment.

PhasingSetRefln(Category) - Constructor for class org.rcsb.cif.schema.mm.PhasingSetRefln

PhasingSetReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PhasingSetReflnBuilder

PRESENT - org.rcsb.cif.model.ValueKind

The value is present.

Publ - Class in org.rcsb.cif.schema.core

Data items in the PUBL category are used when submitting a manuscript for publication.

Publ - Class in org.rcsb.cif.schema.mm

Data items in the PUBL category are used when submitting a manuscript for publication.

Publ(Category) - Constructor for class org.rcsb.cif.schema.mm.Publ

Publ(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Publ

PublAuthor - Class in org.rcsb.cif.schema.core

Category of data items recording the author information.

PublAuthor - Class in org.rcsb.cif.schema.mm

Data items in the PUBL_AUTHOR category record details of the authors of a manuscript submitted for publication.

PublAuthor(Category) - Constructor for class org.rcsb.cif.schema.mm.PublAuthor

PublAuthor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublAuthor

PublAuthorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublAuthorBuilder

PublAuthorBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublAuthorBuilder

PublBody - Class in org.rcsb.cif.schema.core

Data items in the PUBL_BODY category permit labelling of different text sections within the body of a submitted paper.

PublBody - Class in org.rcsb.cif.schema.mm

Data items in the PUBL_BODY category permit the labelling of different text sections within the body of a paper.

PublBody(Category) - Constructor for class org.rcsb.cif.schema.mm.PublBody

PublBody(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublBody

PublBodyBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBodyBuilder

PublBodyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBodyBuilder

PublBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublBuilder

PublBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublBuilder

PublContactAuthor - Class in org.rcsb.cif.schema.core

Category of items describing contact author(s) details.

PublContactAuthor(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublContactAuthor

PublContactAuthorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublContactAuthorBuilder

Publication - Class in org.rcsb.cif.schema.core

The DICTIONARY group encompassing the CORE PUBLICATION data items defined and used with in the Crystallographic Information Framework (CIF).

Publication(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Publication

PublicationBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublicationBuilder

PublManuscript - Class in org.rcsb.cif.schema.core

Category of items describing the publication manuscript.

PublManuscript(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublManuscript

PublManuscriptBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptBuilder

PublManuscriptIncl - Class in org.rcsb.cif.schema.core

PublManuscriptIncl - Class in org.rcsb.cif.schema.mm

Data items in the PUBL_MANUSCRIPT_INCL category allow the authors of a manuscript submitted for publication to list data names that should be added to the standard request list used by the journal printing software.

PublManuscriptIncl(Category) - Constructor for class org.rcsb.cif.schema.mm.PublManuscriptIncl

PublManuscriptIncl(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublManuscriptIncl

PublManuscriptInclBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclBuilder

PublManuscriptInclBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PublManuscriptInclBuilder

PublManuscriptInclExtra - Class in org.rcsb.cif.schema.core

Category of data items that allow the authors of a manuscript to submit for publication data names that should be added to the standard request list employed by journal printing software.

PublManuscriptInclExtra(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublManuscriptInclExtra

PublManuscriptInclExtraBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublManuscriptInclExtraBuilder

PublRequested - Class in org.rcsb.cif.schema.core

CATEGORY of data items that enable the author to make specific requests to the journal office for processing.

PublRequested(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublRequested

PublRequestedBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublRequestedBuilder

PublSection - Class in org.rcsb.cif.schema.core

Manuscript section data if submitted in parts.

PublSection(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.PublSection

PublSectionBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.PublSectionBuilder

put(String, V) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

putAll(Map<? extends String, ? extends V>) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

putIfAbsent(String, V) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

R

read(InputStream) - Method in class org.rcsb.cif.binary.BinaryCifReader

read(InputStream) - Method in class org.rcsb.cif.text.TextCifReader

readById(String) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from web.

readById(String, CifOptions) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from web.

readFromInputStream(InputStream) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given InputStream.

readFromInputStream(InputStream, CifOptions) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given InputStream.

readFromPath(Path) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given Path.

readFromPath(Path, CifOptions) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given Path.

readFromURL(URL) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given URL.

readFromURL(URL, CifOptions) - Static method in class org.rcsb.cif.CifIO

Read a CifFile from a given URL.

readText(String) - Method in class org.rcsb.cif.text.TextCifReader

Refine - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify information about the refinement of the structural model.

Refine - Class in org.rcsb.cif.schema.mm

Data items in the REFINE category record details about the structure-refinement parameters.

Refine(Category) - Constructor for class org.rcsb.cif.schema.mm.Refine

Refine(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Refine

RefineAnalyze - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_ANALYZE category record details about the refined structure that are often used to analyze the refinement and assess its quality.

RefineAnalyze(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineAnalyze

RefineAnalyzeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineAnalyzeBuilder

RefineBIso - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_B_ISO category record details about the treatment of isotropic B factors (displacement parameters) during refinement.

RefineBIso(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineBIso

RefineBIsoBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBIsoBuilder

RefineBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineBuilder

RefineBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineBuilder

RefineDiff - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the electron density limits in a difference Fourier map after the structure has been refined.

RefineDiff(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.RefineDiff

RefineDiffBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineDiffBuilder

RefineFunctMinimized - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_FUNCT_MINIMIZED category record details about the individual terms of the function minimized during refinement.

RefineFunctMinimized(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineFunctMinimized

RefineFunctMinimizedBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineFunctMinimizedBuilder

RefineHist - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_HIST category record details about the steps during the refinement of the structure.

RefineHist(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineHist

RefineHistBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineHistBuilder

RefineLs - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify information about the refinement of the structural model.

RefineLs(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.RefineLs

RefineLsBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsBuilder

RefineLsClass - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify information about the refinement of the structural model.

RefineLsClass - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_LS_CLASS category record details about the reflections used for the structure refinement for each reflection class separately.

RefineLsClass(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineLsClass

RefineLsClass(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.RefineLsClass

RefineLsClassBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.RefineLsClassBuilder

RefineLsClassBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsClassBuilder

RefineLsRestr - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_LS_RESTR category record details about the restraints applied to various classes of parameters during the least-squares refinement.

RefineLsRestr(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineLsRestr

RefineLsRestrBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrBuilder

RefineLsRestrNcs - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_LS_RESTR_NCS category record details about the restraints applied to atom positions in domains related by noncrystallographic symmetry during least-squares refinement, and also about the deviation of the restrained atomic parameters at the end of the refinement.

RefineLsRestrNcs(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineLsRestrNcs

RefineLsRestrNcsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrNcsBuilder

RefineLsRestrType - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_LS_RESTR_TYPE category record details about the restraint types used in the least-squares refinement.

RefineLsRestrType(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineLsRestrType

RefineLsRestrTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsRestrTypeBuilder

RefineLsShell - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_LS_SHELL category record details about the results of the least-squares refinement broken down into shells of resolution.

RefineLsShell(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineLsShell

RefineLsShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineLsShellBuilder

RefineOccupancy - Class in org.rcsb.cif.schema.mm

Data items in the REFINE_OCCUPANCY category record details about the treatment of atom occupancies during refinement.

RefineOccupancy(Category) - Constructor for class org.rcsb.cif.schema.mm.RefineOccupancy

RefineOccupancyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.RefineOccupancyBuilder

Refln - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe the reflection data used in the refinement of a crystallographic structure model.

Refln - Class in org.rcsb.cif.schema.mm

Data items in the REFLN category record details about the reflection data used to determine the ATOM_SITE data items.

Refln(Category) - Constructor for class org.rcsb.cif.schema.mm.Refln

Refln(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Refln

ReflnBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnBuilder

ReflnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnBuilder

Reflns - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify parameters for the complete set of reflections used in the structure refinement process.

Reflns - Class in org.rcsb.cif.schema.mm

Data items in the REFLNS category record details about the reflection data used to determine the ATOM_SITE data items.

Reflns(Category) - Constructor for class org.rcsb.cif.schema.mm.Reflns

Reflns(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Reflns

ReflnsBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsBuilder

ReflnsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsBuilder

ReflnsClass - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the properties of reflections in specific classes of reflections.

ReflnsClass - Class in org.rcsb.cif.schema.mm

Data items in the REFLNS_CLASS category record details of the reflections used to determine the structural parameters for each reflection class.

ReflnsClass(Category) - Constructor for class org.rcsb.cif.schema.mm.ReflnsClass

ReflnsClass(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ReflnsClass

ReflnsClassBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsClassBuilder

ReflnsClassBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsClassBuilder

ReflnsScale - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the scales needed to place measured structure factor coefficients on the same absolute scale.

ReflnsScale - Class in org.rcsb.cif.schema.mm

Data items in the REFLNS_SCALE category record details about the structure-factor scales.

ReflnsScale(Category) - Constructor for class org.rcsb.cif.schema.mm.ReflnsScale

ReflnsScale(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ReflnsScale

ReflnsScaleBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsScaleBuilder

ReflnsScaleBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsScaleBuilder

ReflnsShell - Class in org.rcsb.cif.schema.core

The CATEGORY of data items which specify the information about reflections divided into shells bounded by d resolution limits.

ReflnsShell - Class in org.rcsb.cif.schema.mm

Data items in the REFLNS_SHELL category record details about the reflection data used to determine the ATOM_SITE data items broken down into shells of resolution.

ReflnsShell(Category) - Constructor for class org.rcsb.cif.schema.mm.ReflnsShell

ReflnsShell(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ReflnsShell

ReflnsShellBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ReflnsShellBuilder

ReflnsShellBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnsShellBuilder

ReflnSysAbs - Class in org.rcsb.cif.schema.mm

Data items in the REFLN_SYS_ABS category record details about the reflection data that should be systematically absent, given the designated space group.

ReflnSysAbs(Category) - Constructor for class org.rcsb.cif.schema.mm.ReflnSysAbs

ReflnSysAbsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ReflnSysAbsBuilder

registerChild(ColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in class org.rcsb.cif.model.builder.CategoryBuilderImpl

registerChild(ColumnBuilder<? extends CategoryBuilder<P, PP>, P, PP>) - Method in interface org.rcsb.cif.model.CategoryBuilder

Make this builder aware of a child builder at column level.

remove(Object) - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

RunLengthEncoding - Class in org.rcsb.cif.binary.encoding

Represents each integer value in the input as a pair of (value, number of repeats) and stores the result sequentially as Int32Array.

RunLengthEncoding() - Constructor for class org.rcsb.cif.binary.encoding.RunLengthEncoding

RunLengthEncoding(int, int) - Constructor for class org.rcsb.cif.binary.encoding.RunLengthEncoding

S

saveFrames() - Method in interface org.rcsb.cif.model.Block

Convenience method to traverse all save frames.

SchemaGenerator - Class in org.rcsb.cif.schema.generator

Creates a type-safe data model using a CIF dictionary.

SchemaMismatchException - Exception in org.rcsb.cif

Indicates potential schema validations by using incorrect schemata.

SchemaMismatchException(String) - Constructor for exception org.rcsb.cif.SchemaMismatchException

SchemaMismatchException(String, Exception) - Constructor for exception org.rcsb.cif.SchemaMismatchException

SchemaProvider<F extends CifFile,B extends CifFileBuilder> - Interface in org.rcsb.cif.schema

A SchemaProvides wraps CifFile and CifFileBuilder instances in their schema-aware subclass.

setCategoryName(String) - Method in class org.rcsb.cif.EncodingStrategyHint

Change the category this hint refers to.

setColumnName(String) - Method in class org.rcsb.cif.EncodingStrategyHint

Change the column this hint refers to.

setEncoding(String) - Method in class org.rcsb.cif.EncodingStrategyHint

Change the encoding strategy to employ.

setEncoding(Deque<Encoding<?, ?>>) - Method in interface org.rcsb.cif.binary.data.EncodedData

Replace this encoding chain with a different one.

setPrecision(Integer) - Method in class org.rcsb.cif.EncodingStrategyHint

Specify the precision for this column.

SignedIntArray<T extends SignedIntArray<?>> - Interface in org.rcsb.cif.binary.data

An array of signed integer numbers.

size() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

Software - Class in org.rcsb.cif.schema.mm

Data items in the SOFTWARE category record details about the software used in the structure analysis, which implies any software used in the generation of any data items associated with the structure determination and structure representation.

Software(Category) - Constructor for class org.rcsb.cif.schema.mm.Software

SoftwareBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SoftwareBuilder

SpaceGroup - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to specify space group information about the crystal used in the diffraction measurements.

SpaceGroup - Class in org.rcsb.cif.schema.mm

Contains all the data items that refer to the space group as a whole, such as its name or crystal system.

SpaceGroup(Category) - Constructor for class org.rcsb.cif.schema.mm.SpaceGroup

SpaceGroup(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.SpaceGroup

SpaceGroupBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupBuilder

SpaceGroupBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupBuilder

SpaceGroupGenerator - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to list generators for the space group

SpaceGroupGenerator(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.SpaceGroupGenerator

SpaceGroupGeneratorBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupGeneratorBuilder

SpaceGroupSymop - Class in org.rcsb.cif.schema.core

The CATEGORY of data items used to describe symmetry equivalent sites in the crystal unit cell.

SpaceGroupSymop - Class in org.rcsb.cif.schema.mm

Contains information about the symmetry operations of the space group.

SpaceGroupSymop(Category) - Constructor for class org.rcsb.cif.schema.mm.SpaceGroupSymop

SpaceGroupSymop(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.SpaceGroupSymop

SpaceGroupSymopBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupSymopBuilder

SpaceGroupSymopBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SpaceGroupSymopBuilder

SpaceGroupWyckoff - Class in org.rcsb.cif.schema.core

Contains information about Wyckoff positions of a space group.

SpaceGroupWyckoff(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.SpaceGroupWyckoff

SpaceGroupWyckoffBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SpaceGroupWyckoffBuilder

StandardSchemata - Class in org.rcsb.cif.schema

A collection of commonly used schemata (and their corresponding SchemaProvider).

StandardSchemata() - Constructor for class org.rcsb.cif.schema.StandardSchemata

StrColumn - Interface in org.rcsb.cif.model

A column that provides String data.

StrColumnBuilder<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Interface in org.rcsb.cif.model

A builder instance for StrColumn instances.

StrColumnBuilderImpl<P extends CategoryBuilder<PP,PPP>,PP extends BlockBuilder<PPP>,PPP extends CifFileBuilder> - Class in org.rcsb.cif.model.builder

StrColumnBuilderImpl(String, String, P) - Constructor for class org.rcsb.cif.model.builder.StrColumnBuilderImpl

StringArray - Class in org.rcsb.cif.binary.data

An array of String values.

StringArray(Object, Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.StringArray

StringArray(String[]) - Constructor for class org.rcsb.cif.binary.data.StringArray

StringArrayEncoding - Class in org.rcsb.cif.binary.encoding

Stores an array of strings as a concatenation of all unique strings, an array of offsets describing substrings, and indices into the offset array.

StringArrayEncoding() - Constructor for class org.rcsb.cif.binary.encoding.StringArrayEncoding

StringArrayEncoding(String, byte[], Deque<Encoding<?, ?>>, Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.encoding.StringArrayEncoding

stringData() - Method in interface org.rcsb.cif.model.Column

Access to all entries of this column as String values.

Struct - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT category record details about the description of the crystallographic structure.

Struct(Category) - Constructor for class org.rcsb.cif.schema.mm.Struct

StructAsym - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_ASYM category record details about the structural elements in the asymmetric unit.

StructAsym(Category) - Constructor for class org.rcsb.cif.schema.mm.StructAsym

StructAsymBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructAsymBuilder

StructBiol - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_BIOL category record details about the structural elements that form each structure of biological significance.

StructBiol(Category) - Constructor for class org.rcsb.cif.schema.mm.StructBiol

StructBiolBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolBuilder

StructBiolGen - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_BIOL_GEN category record details about the generation of each biological unit.

StructBiolGen(Category) - Constructor for class org.rcsb.cif.schema.mm.StructBiolGen

StructBiolGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolGenBuilder

StructBiolKeywords - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_BIOL_KEYWORDS category record keywords that describe each biological unit.

StructBiolKeywords(Category) - Constructor for class org.rcsb.cif.schema.mm.StructBiolKeywords

StructBiolKeywordsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolKeywordsBuilder

StructBiolView - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_BIOL_VIEW category record details about how to draw and annotate an informative view of the biological structure.

StructBiolView(Category) - Constructor for class org.rcsb.cif.schema.mm.StructBiolView

StructBiolViewBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBiolViewBuilder

StructBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructBuilder

StructConf - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_CONF category record details about the backbone conformation of a segment of polymer.

StructConf(Category) - Constructor for class org.rcsb.cif.schema.mm.StructConf

StructConfBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfBuilder

StructConfType - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_CONF_TYPE category record details about the criteria used to identify backbone conformations of a segment of polymer.

StructConfType(Category) - Constructor for class org.rcsb.cif.schema.mm.StructConfType

StructConfTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConfTypeBuilder

StructConn - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_CONN category record details about the connections between portions of the structure.

StructConn(Category) - Constructor for class org.rcsb.cif.schema.mm.StructConn

StructConnBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnBuilder

StructConnType - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_CONN_TYPE category record details about the criteria used to identify interactions between portions of the structure.

StructConnType(Category) - Constructor for class org.rcsb.cif.schema.mm.StructConnType

StructConnTypeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructConnTypeBuilder

StructKeywords - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_KEYWORDS category specify keywords that describe the chemical structure in this entry.

StructKeywords(Category) - Constructor for class org.rcsb.cif.schema.mm.StructKeywords

StructKeywordsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructKeywordsBuilder

StructMonDetails - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_MON_DETAILS category record details about specifics of calculations summarized in data items in the STRUCT_MON_PROT and STRUCT_MON_NUCL categories.

StructMonDetails(Category) - Constructor for class org.rcsb.cif.schema.mm.StructMonDetails

StructMonDetailsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonDetailsBuilder

StructMonNucl - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_MON_NUCL category record details about structural properties of a nucleic acid when analyzed at the monomer level.

StructMonNucl(Category) - Constructor for class org.rcsb.cif.schema.mm.StructMonNucl

StructMonNuclBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonNuclBuilder

StructMonProt - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_MON_PROT category record details about structural properties of a protein when analyzed at the monomer level.

StructMonProt(Category) - Constructor for class org.rcsb.cif.schema.mm.StructMonProt

StructMonProtBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtBuilder

StructMonProtCis - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_MON_PROT_CIS category identify monomers that have been found to have the peptide bond in the cis conformation.

StructMonProtCis(Category) - Constructor for class org.rcsb.cif.schema.mm.StructMonProtCis

StructMonProtCisBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructMonProtCisBuilder

StructNcsDom - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_NCS_DOM category record information about the domains in an ensemble of domains related by one or more noncrystallographic symmetry operators.

StructNcsDom(Category) - Constructor for class org.rcsb.cif.schema.mm.StructNcsDom

StructNcsDomBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomBuilder

StructNcsDomLim - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry.

StructNcsDomLim(Category) - Constructor for class org.rcsb.cif.schema.mm.StructNcsDomLim

StructNcsDomLimBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsDomLimBuilder

StructNcsEns - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_NCS_ENS category record information about ensembles of domains related by noncrystallographic symmetry.

StructNcsEns(Category) - Constructor for class org.rcsb.cif.schema.mm.StructNcsEns

StructNcsEnsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsBuilder

StructNcsEnsGen - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_NCS_ENS_GEN category list domains related by a noncrystallographic symmetry operation and identify the operator.

StructNcsEnsGen(Category) - Constructor for class org.rcsb.cif.schema.mm.StructNcsEnsGen

StructNcsEnsGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsEnsGenBuilder

StructNcsOper - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_NCS_OPER category describe the noncrystallographic symmetry operations.

StructNcsOper(Category) - Constructor for class org.rcsb.cif.schema.mm.StructNcsOper

StructNcsOperBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructNcsOperBuilder

StructRef - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_REF category allow the author of a data block to relate the entities or biological units described in the data block to information archived in external databases.

StructRef(Category) - Constructor for class org.rcsb.cif.schema.mm.StructRef

StructRefBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefBuilder

StructRefSeq - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_REF_SEQ category provide a mechanism for indicating and annotating a region (or regions) of alignment between the sequence of an entity or biological unit described in the data block and the sequence in the referenced database entry.

StructRefSeq(Category) - Constructor for class org.rcsb.cif.schema.mm.StructRefSeq

StructRefSeqBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqBuilder

StructRefSeqDif - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_REF_SEQ_DIF category provide a mechanism for indicating and annotating point differences between the sequence of the entity or biological unit described in the data block and the sequence of the referenced database entry.

StructRefSeqDif(Category) - Constructor for class org.rcsb.cif.schema.mm.StructRefSeqDif

StructRefSeqDifBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructRefSeqDifBuilder

StructSheet - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SHEET category record details about the beta-sheets.

StructSheet(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSheet

StructSheetBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetBuilder

StructSheetHbond - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SHEET_HBOND category record details about the hydrogen bonding between residue ranges in a beta- sheet.

StructSheetHbond(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSheetHbond

StructSheetHbondBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetHbondBuilder

StructSheetOrder - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SHEET_ORDER category record details about the order of the residue ranges that form a beta-sheet.

StructSheetOrder(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSheetOrder

StructSheetOrderBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetOrderBuilder

StructSheetRange - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SHEET_RANGE category record details about the residue ranges that form a beta-sheet.

StructSheetRange(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSheetRange

StructSheetRangeBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetRangeBuilder

StructSheetTopology - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SHEET_TOPOLOGY category record details about the topology of the residue ranges that form a beta-sheet.

StructSheetTopology(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSheetTopology

StructSheetTopologyBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSheetTopologyBuilder

StructSite - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SITE category record details about portions of the structure that contribute to structurally relevant sites (e.g.

StructSite(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSite

StructSiteBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteBuilder

StructSiteGen - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SITE_GEN category record details about the generation of portions of the structure that contribute to structurally relevant sites.

StructSiteGen(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSiteGen

StructSiteGenBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteGenBuilder

StructSiteKeywords - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SITE_KEYWORDS category record keywords describing the site.

StructSiteKeywords(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSiteKeywords

StructSiteKeywordsBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteKeywordsBuilder

StructSiteView - Class in org.rcsb.cif.schema.mm

Data items in the STRUCT_SITE_VIEW category record details about how to draw and annotate an informative view of the site.

StructSiteView(Category) - Constructor for class org.rcsb.cif.schema.mm.StructSiteView

StructSiteViewBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.StructSiteViewBuilder

Structure - Class in org.rcsb.cif.schema.core

The DICTIONARY group encompassing the CORE STRUCTURE data items defined and used with in the Crystallographic Information Framework (CIF).

Structure(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Structure

StructureBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.StructureBuilder

Symmetry - Class in org.rcsb.cif.schema.core

Symmetry - Class in org.rcsb.cif.schema.mm

Data items in the SYMMETRY category record details about the space-group symmetry.

Symmetry(Category) - Constructor for class org.rcsb.cif.schema.mm.Symmetry

Symmetry(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Symmetry

SymmetryBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryBuilder

SymmetryBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryBuilder

SymmetryEquiv - Class in org.rcsb.cif.schema.core

SymmetryEquiv - Class in org.rcsb.cif.schema.mm

Data items in the SYMMETRY_EQUIV category list the symmetry-equivalent positions for the space group.

SymmetryEquiv(Category) - Constructor for class org.rcsb.cif.schema.mm.SymmetryEquiv

SymmetryEquiv(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.SymmetryEquiv

SymmetryEquivBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.SymmetryEquivBuilder

SymmetryEquivBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.SymmetryEquivBuilder

T

TextBlock - Class in org.rcsb.cif.model.text

TextBlock(Map<String, Category>, String) - Constructor for class org.rcsb.cif.model.text.TextBlock

TextBlock(Map<String, Category>, String, List<Block>) - Constructor for class org.rcsb.cif.model.text.TextBlock

TextCategory - Class in org.rcsb.cif.model.text

TextCategory(String, Map<String, Column<?>>) - Constructor for class org.rcsb.cif.model.text.TextCategory

TextCifReader - Class in org.rcsb.cif.text

TextCifReader(CifOptions) - Constructor for class org.rcsb.cif.text.TextCifReader

TextCifWriter - Class in org.rcsb.cif.text

TextCifWriter(CifOptions) - Constructor for class org.rcsb.cif.text.TextCifWriter

TextColumn - Class in org.rcsb.cif.model.text

TextColumn(String, int, String, int[], int[]) - Constructor for class org.rcsb.cif.model.text.TextColumn

TextFile - Class in org.rcsb.cif.model.text

TextFile(List<Block>) - Constructor for class org.rcsb.cif.model.text.TextFile

toByteArray() - Method in class org.rcsb.cif.binary.data.Float32Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Float64Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Int16Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Int32Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Int8Array

toByteArray() - Method in interface org.rcsb.cif.binary.data.NumberArray

Converts this number array to its binary representation.

toByteArray() - Method in class org.rcsb.cif.binary.data.Uint16Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Uint32Array

toByteArray() - Method in class org.rcsb.cif.binary.data.Uint8Array

toString() - Method in class org.rcsb.cif.binary.data.ByteArray

toString() - Method in class org.rcsb.cif.binary.data.Float32Array

toString() - Method in class org.rcsb.cif.binary.data.Float64Array

toString() - Method in class org.rcsb.cif.binary.data.Int16Array

toString() - Method in class org.rcsb.cif.binary.data.Int32Array

toString() - Method in class org.rcsb.cif.binary.data.Int8Array

toString() - Method in class org.rcsb.cif.binary.data.StringArray

toString() - Method in class org.rcsb.cif.binary.data.Uint16Array

toString() - Method in class org.rcsb.cif.binary.data.Uint32Array

toString() - Method in class org.rcsb.cif.binary.data.Uint8Array

toString() - Method in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.DeltaEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.FixedPointEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.IntegerPackingEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.IntervalQuantizationEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.RunLengthEncoding

toString() - Method in class org.rcsb.cif.binary.encoding.StringArrayEncoding

toString() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

type - Variable in class org.rcsb.cif.schema.DelegatingColumn

U

UINT16 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Uint16Array - Class in org.rcsb.cif.binary.data

An array of unsigned integer numbers using 16 bit to store each value.

Uint16Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Uint16Array

Uint16Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Uint16Array

Uint16Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Uint16Array

UINT32 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Uint32Array - Class in org.rcsb.cif.binary.data

An array of unsigned integer numbers using 32 bit to store each value.

Uint32Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Uint32Array

Uint32Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Uint32Array

Uint32Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Uint32Array

UINT8 - Static variable in class org.rcsb.cif.binary.encoding.ByteArrayEncoding

Uint8Array - Class in org.rcsb.cif.binary.data

An array of unsigned integer numbers using 8 bit to store each value.

Uint8Array(int[]) - Constructor for class org.rcsb.cif.binary.data.Uint8Array

Uint8Array(int[], Deque<Encoding<?, ?>>) - Constructor for class org.rcsb.cif.binary.data.Uint8Array

Uint8Array(ByteArray) - Constructor for class org.rcsb.cif.binary.data.Uint8Array

UNKNOWN - org.rcsb.cif.model.ValueKind

The value is unknown - ? in CIF.

UNNAMED_COLUMN - Static variable in class org.rcsb.cif.model.Column.EmptyColumn

UnsignedIntArray - Interface in org.rcsb.cif.binary.data

A subset of data arrays is unsigned.

V

Valence - Class in org.rcsb.cif.schema.core

The CATEGORY of items used to specify bond valence parameters used to calculate bond valences from bond lengths.

Valence(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.Valence

ValenceBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceBuilder

ValenceParam - Class in org.rcsb.cif.schema.core

The CATEGORY of items for listing bond valences.

ValenceParam - Class in org.rcsb.cif.schema.mm

Data items in the VALENCE_PARAM category define the parameters used for calculating bond valences from bond lengths.

ValenceParam(Category) - Constructor for class org.rcsb.cif.schema.mm.ValenceParam

ValenceParam(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ValenceParam

ValenceParamBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceParamBuilder

ValenceParamBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceParamBuilder

ValenceRef - Class in org.rcsb.cif.schema.core

The CATEGORY of items for listing valence references.

ValenceRef - Class in org.rcsb.cif.schema.mm

Data items in the VALENCE_REF category list the references from which the bond-valence parameters have been taken.

ValenceRef(Category) - Constructor for class org.rcsb.cif.schema.mm.ValenceRef

ValenceRef(CifCoreBlock) - Constructor for class org.rcsb.cif.schema.core.ValenceRef

ValenceRefBuilder(CifCoreBlockBuilder) - Constructor for class org.rcsb.cif.schema.core.CifCoreCategoryBuilder.ValenceRefBuilder

ValenceRefBuilder(MmCifBlockBuilder) - Constructor for class org.rcsb.cif.schema.mm.MmCifCategoryBuilder.ValenceRefBuilder

validate(CifFile) - Method in class org.rcsb.cif.schema.CifCoreSchemaProvider

validate(CifFile) - Method in class org.rcsb.cif.schema.MmCifSchemaProvider

validate(CifFile) - Method in interface org.rcsb.cif.schema.SchemaProvider

Perform an optional check if the provided argument matches this schema.

ValueKind - Enum in org.rcsb.cif.model

Reports whether a certain row in a certain Column is present.

valueKinds() - Method in class org.rcsb.cif.model.Column.EmptyColumn

valueKinds() - Method in interface org.rcsb.cif.model.Column

Stream of all ValueKind annotations.

valueOf(String) - Static method in enum org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.rcsb.cif.model.ValueKind

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.rcsb.cif.CifOptions.CifOptionsBuilder.FileFormat

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Method in interface org.rcsb.cif.model.FloatColumn

A DoubleStream of all registered values.

values() - Method in interface org.rcsb.cif.model.IntColumn

An IntStream of all registered values.

values() - Method in class org.rcsb.cif.model.LinkedCaseInsensitiveMap

values() - Method in interface org.rcsb.cif.model.StrColumn

A Stream of all registered values.

values() - Static method in enum org.rcsb.cif.model.ValueKind

Returns an array containing the constants of this enum type, in the order they are declared.

VERSION - Static variable in class org.rcsb.cif.binary.codec.BinaryCifCodec

W

write(CifFile) - Method in class org.rcsb.cif.binary.BinaryCifWriter

write(CifFile) - Method in class org.rcsb.cif.text.TextCifWriter

writeBinary(CifFile) - Static method in class org.rcsb.cif.CifIO

Convert a CifFile to its binary byte[] representation.

writeBinary(CifFile, Path) - Static method in class org.rcsb.cif.CifIO

Write a binary CifFile to a given Path.

writeBinary(CifFile, Path, CifOptions) - Static method in class org.rcsb.cif.CifIO

Write a binary CifFile to a given Path.

writeBinary(CifFile, CifOptions) - Static method in class org.rcsb.cif.CifIO

Convert a CifFile to its binary byte[] representation.

writeText(CifFile) - Static method in class org.rcsb.cif.CifIO

Convert a CifFile to its text byte[] representation.

writeText(CifFile, Path) - Static method in class org.rcsb.cif.CifIO

Write a text CifFile to a given Path.

writeText(CifFile, Path, CifOptions) - Static method in class org.rcsb.cif.CifIO

Write a text CifFile to a given Path.

writeText(CifFile, CifOptions) - Static method in class org.rcsb.cif.CifIO

Convert a CifFile to its text byte[] representation.

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