StrColumn |
EmSamplePreparation.get_2dCrystalGrowId() |
This data item is a pointer to _em_2d_crystal_grow.id
in the 2D_CRYSTAL_GROW category.
|
StrColumn |
Em3dFittingList.get_3dFittingId() |
The value of _em_3d_fitting_list.3d_fitting_id is a pointer
to _em_3d_fitting.id in the 3d_fitting category
|
StrColumn |
Chemical.getAbsoluteConfiguration() |
Necessary conditions for the assignment of
_chemical.absolute_configuration are given by H.
|
StrColumn |
Exptl.getAbsorptCorrectionType() |
The absorption correction type and method.
|
StrColumn |
Exptl.getAbsorptProcessDetails() |
Description of the absorption process applied to the
intensities.
|
StrColumn |
Citation.getAbstract() |
Abstract for the citation.
|
StrColumn |
Citation.getAbstractIdCAS() |
The Chemical Abstracts Service (CAS) abstract identifier;
relevant for journal articles.
|
StrColumn |
EmDbReference.getAccessCode() |
Unique identifier for a provided link.
|
StrColumn |
IhmDatasetRelatedDbReference.getAccessionCode() |
The accession code for the database entry.
|
StrColumn |
PdbxChemCompAudit.getActionType() |
The action associated with this audit record.
|
StrColumn |
PdbxChemCompModelAudit.getActionType() |
The action associated with this audit record.
|
StrColumn |
PdbxFamilyPrdAudit.getActionType() |
The action associated with this audit record.
|
StrColumn |
PdbxPrdAudit.getActionType() |
The action associated with this audit record.
|
StrColumn |
AuditAuthor.getAddress() |
The address of an author of this data block.
|
StrColumn |
AuditContactAuthor.getAddress() |
The mailing address of the author of the data block to whom
correspondence should be addressed.
|
StrColumn |
PdbxAuditAuthor.getAddress() |
The address of an author of this data block.
|
StrColumn |
PublAuthor.getAddress() |
The address of a publication author.
|
StrColumn |
PdbxContactAuthor.getAddress1() |
The mailing address of the author of the data block to whom
correspondence should be addressed, line 1 of 3.
|
StrColumn |
PdbxContactAuthor.getAddress2() |
The mailing address of the author of the data block to whom
correspondence should be addressed, line 2 of 3.
|
StrColumn |
PdbxContactAuthor.getAddress3() |
The mailing address of the author of the data block to whom
correspondence should be addressed, line 3 of 3.
|
StrColumn |
PdbxDepuiValidationStatusFlags.getAdpOutliersZero() |
A flag to indicate if any isotropic B factors are zero.
|
StrColumn |
AtomSite.getAdpType() |
A standard code used to describe the type of atomic displacement
parameters used for the site.
|
StrColumn |
EmAssembly.getAggregationState() |
A description of the aggregation state of the assembly.
|
StrColumn |
EmExperiment.getAggregationState() |
The aggregation/assembly state of the imaged specimen.
|
StrColumn |
Em3dReconstruction.getAlgorithm() |
The algorithm used project from 2D orientations to 3D map.
|
StrColumn |
PdbxStructRefSeqFeature.getAlignId() |
This data item is a pointer to _struct_ref_seq.align_id in
the STRUCT_REF_SEQ category.
|
StrColumn |
StructRefSeq.getAlignId() |
The value of _struct_ref_seq.align_id must uniquely identify a
record in the STRUCT_REF_SEQ list.
|
StrColumn |
StructRefSeqDif.getAlignId() |
This data item is a pointer to _struct_ref_seq.align_id in
the STRUCT_REF_SEQ category.
|
StrColumn |
EmImaging.getAlignmentProcedure() |
microscope alignment procedure
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getAllChains() |
Flag indicating that all polymer chains are used in the assembly
|
StrColumn |
ChemCompAtom.getAltAtomId() |
An alternative identifier for the atom.
|
StrColumn |
PdbxChemCompDepositorInfo.getAltCompId() |
The alternate chemical component identifier matching the deposited chemical component.
|
StrColumn |
AtomSitesAltGen.getAltId() |
This data item is a pointer to _atom_sites_alt.id in the
ATOM_SITES_ALT category.
|
StrColumn |
Diffrn.getAmbientEnvironment() |
The gas or liquid surrounding the sample, if not air.
|
StrColumn |
Diffrn.getAmbientTempDetails() |
A description of special aspects of temperature control during
data collection.
|
StrColumn |
IhmPolyProbeConjugate.getAmbiguousStoichiometryFlag() |
Indicate whether there is ambiguity regarding the stoichiometry of the labeled site.
|
StrColumn |
EmCtfCorrection.getAmplitudeCorrection() |
Yes if CTF amplitude correction was performed
|
StrColumn |
EmCtfCorrection.getAmplitudeCorrectionSpace() |
CTF amplitude correction space
|
StrColumn |
ChemicalFormula.getAnalytical() |
Formula determined by standard chemical analysis including trace
elements.
|
StrColumn |
PdbxExptlCrystalCryoTreatment.getAnnealingDetails() |
Details of the annealing treatment applied to this crystal.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getAnnotation() |
The description of the sequence difference.
|
StrColumn |
EmMap.getAnnotationDetails() |
map annotation details
|
StrColumn |
EmMapDepositorInfo.getAnnotationDetails() |
map annotation details
|
StrColumn |
EmMaskDepositorInfo.getAnnotationDetails() |
map annotation details
|
StrColumn |
PdbxChemCompAudit.getAnnotator() |
The initials of the annotator creating of modifying the component.
|
StrColumn |
PdbxChemCompModelAudit.getAnnotator() |
The initials of the annotator creating of modifying the component.
|
StrColumn |
PdbxFamilyPrdAudit.getAnnotator() |
The initials of the annotator creating of modifying the family.
|
StrColumn |
PdbxPostProcessStatus.getAnnotator() |
The name of the annotator.
|
StrColumn |
PdbxPrdAudit.getAnnotator() |
The initials of the annotator creating of modifying the molecule.
|
StrColumn |
ExptlCrystalGrow.getApparatus() |
The physical apparatus in which the crystal was grown.
|
StrColumn |
IhmDatasetGroup.getApplication() |
The application / utilization of the dataset group in modeling.
|
StrColumn |
EmEntityAssembly.getAssemblyId() |
This data item is a pointer to _em_assembly.id in the
ASSEMBLY category.
|
StrColumn |
PdbxFeatureAssembly.getAssemblyId() |
The value of _pdbx_feature_assembly.assembly_id references an
assembly definition in category STRUCT_BIOL
|
StrColumn |
PdbxStructAssemblyAuthClassification.getAssemblyId() |
This item references an assembly in pdbx_struct_assembly
|
StrColumn |
PdbxStructAssemblyAuthEvidence.getAssemblyId() |
This item references an assembly in pdbx_struct_assembly
|
StrColumn |
PdbxStructAssemblyAuthEvidenceDepositorInfo.getAssemblyId() |
This item references an assembly in pdbx_struct_assembly
|
StrColumn |
PdbxStructAssemblyGen.getAssemblyId() |
This data item is a pointer to _pdbx_struct_assembly.id in the
PDBX_STRUCT_ASSEMBLY category.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getAssemblyId() |
This data item is a pointer to _pdbx_struct_assembly.id in the
PDBX_STRUCT_ASSEMBLY category.
|
StrColumn |
IhmExternalReferenceInfo.getAssociatedUrl() |
The Uniform Resource Locator (URL) corresponding to the external reference (DOI).
|
StrColumn |
EmImaging.getAstigmatism() |
astigmatism
|
StrColumn |
PdbxReferencePublicationList.getASTMCodeType() |
The American Society for Testing and Materials (ASTM) code
type.
|
StrColumn |
PdbxReferencePublicationList.getASTMCodeValue() |
The American Society for Testing and Materials (ASTM) code
assignment.
|
StrColumn |
IhmGaussianObjEnsemble.getAsymId() |
An asym/strand identifier corresponding to this gaussian object.
|
StrColumn |
IhmGaussianObjSite.getAsymId() |
An asym/strand identifier corresponding to this gaussian object.
|
StrColumn |
IhmHydroxylRadicalFpRestraint.getAsymId() |
An asym/strand identifier.
|
StrColumn |
IhmLocalizationDensityFiles.getAsymId() |
An asym/strand identifier corresponding to this localization density.
|
StrColumn |
IhmNonPolyFeature.getAsymId() |
An asym/strand identifier of the non-polymer feature, if applicable.
|
StrColumn |
IhmPolyAtomFeature.getAsymId() |
An asym/strand identifier of the atom, if applicable.
|
StrColumn |
IhmPolyResidueFeature.getAsymId() |
An asym/strand identifier for the residue / residue range, if applicable.
|
StrColumn |
IhmResiduesNotModeled.getAsymId() |
An asym/strand identifier.
|
StrColumn |
IhmSphereObjSite.getAsymId() |
An asym/strand identifier corresponding to this sphere object.
|
StrColumn |
IhmStartingModelCoord.getAsymId() |
The asym/strand id corresponding to this coordinate position.
|
StrColumn |
IhmStartingModelDetails.getAsymId() |
An asym/strand identifier for the entity molecule.
|
StrColumn |
IhmStartingModelSeqDif.getAsymId() |
An asym/strand identifier for the entity molecule.
|
StrColumn |
IhmStructAssemblyDetails.getAsymId() |
An asym/strand identifier for the component in the assembly.
|
StrColumn |
PdbxBranchScheme.getAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
PdbxCoordinateModel.getAsymId() |
A reference to _struct_asym.id.
|
StrColumn |
PdbxEntityInstanceFeature.getAsymId() |
Instance identifier for this entity.
|
StrColumn |
PdbxLinkedEntityInstanceList.getAsymId() |
A reference to _struct_asym.id in the STRUCT_ASYM category.
|
StrColumn |
PdbxMolecule.getAsymId() |
A reference to _struct_asym.id in the STRUCT_ASYM category.
|
StrColumn |
PdbxNonpolyScheme.getAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
PdbxPolySeqScheme.getAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
PdbxStructAsymGen.getAsymId() |
This data item is a pointer to _struct_asym.id in the
STRUCT_ASYM category.
|
StrColumn |
PdbxStructChemCompDiagnostics.getAsymId() |
Instance identifier for the polymer molecule.
|
StrColumn |
PdbxStructChemCompFeature.getAsymId() |
Instance identifier for the polymer molecule.
|
StrColumn |
PdbxStructNcsVirusGen.getAsymId() |
The NCS operation is applied to the component of
the asymmetric unit identified by this id.
|
StrColumn |
PdbxStructPackGen.getAsymId() |
This data item is a pointer to _struct_asym.id in the STRUCT_ASYM
category.
|
StrColumn |
PdbxStructRefSeqDeletion.getAsymId() |
Identifies the polymer entity instance in this entry corresponding
to the reference sequence in which the deletion is specified.
|
StrColumn |
PdbxStructRefSeqFeature.getAsymId() |
Instance identifier for the polymer molecule.
|
StrColumn |
PdbxStructRefSeqInsertion.getAsymId() |
Part of the identifier of the inserted residue.
|
StrColumn |
StructBiolGen.getAsymId() |
This data item is a pointer to _struct_asym.id in the STRUCT_ASYM
category.
|
StrColumn |
IhmCrossLinkRestraint.getAsymId1() |
An asym/strand identifier for the first monomer partner in the cross-link.
|
StrColumn |
IhmPredictedContactRestraint.getAsymId1() |
An asym/strand identifier for the first monomer partner in the predicted contact.
|
StrColumn |
IhmCrossLinkRestraint.getAsymId2() |
An asym/strand identifier for the second monomer partner in the cross-link.
|
StrColumn |
IhmPredictedContactRestraint.getAsymId2() |
An asym/strand identifier for the second monomer partner in the predicted contact.
|
StrColumn |
PdbxStructAssemblyGen.getAsymIdList() |
This data item is a pointer to _struct_asym.id in
the STRUCT_ASYM category.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getAsymIdList() |
This data item is a pointer to _struct_asym.id in
the STRUCT_ASYM category.
|
StrColumn |
PdbxReferenceEntitySrcNat.getAtcc() |
The Americal Tissue Culture Collection code for organism from which the entity was isolated.
|
StrColumn |
EmCrystalFormation.getAtmosphere() |
The type of atmosphere in which crystals were grown
|
StrColumn |
EmGridPretreatment.getAtmosphere() |
The atmosphere used for glow discharge of the em grid.
|
StrColumn |
ExptlCrystalGrow.getAtmosphere() |
The nature of the gas or gas mixture in which the crystal was
grown.
|
StrColumn |
ValenceParam.getAtom1() |
The element symbol of the first atom forming the bond whose
bond-valence parameters are given in this category.
|
StrColumn |
ChemLinkAngle.getAtom1CompId() |
This data item indicates whether atom 1 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkBond.getAtom1CompId() |
This data item indicates whether atom 1 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkTor.getAtom1CompId() |
This data item indicates whether atom 1 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ValenceParam.getAtom2() |
The element symbol of the second atom forming the bond whose
bond-valence parameters are given in this category.
|
StrColumn |
ChemLinkAngle.getAtom2CompId() |
This data item indicates whether atom 2 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkBond.getAtom2CompId() |
This data item indicates whether atom 2 is found in the first
or the second of the two chemical components connected by
the link.
|
StrColumn |
ChemLinkTor.getAtom2CompId() |
This data item indicates whether atom 2 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkAngle.getAtom3CompId() |
This data item indicates whether atom 3 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkTor.getAtom3CompId() |
This data item indicates whether atom 3 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkTor.getAtom4CompId() |
This data item indicates whether atom 4 is found in the first
or the second of the two components connected by the link.
|
StrColumn |
ChemLinkChir.getAtomCompId() |
This data item indicates whether the chiral atom is found in the
first or the second of the two components connected by the
link.
|
StrColumn |
ChemLinkChirAtom.getAtomCompId() |
This data item indicates whether the atom bonded to a chiral
atom is found in the first or the second of the two components
connected by the link.
|
StrColumn |
ChemLinkPlaneAtom.getAtomCompId() |
This data item indicates whether the atom in a plane is found in
the first or the second of the two components connected by the
link.
|
StrColumn |
ChemCompChir.getAtomConfig() |
The chiral configuration of the atom that is a chiral centre.
|
StrColumn |
ChemLinkChir.getAtomConfig() |
The chiral configuration of the atom that is a chiral centre.
|
StrColumn |
PdbxNmrChemShiftRef.getAtomGroup() |
Group of atoms within a molecule whose chemical shift was used as the standard
chemical shift reference for the defined observed nuclei.
|
StrColumn |
ChemCompAtom.getAtomId() |
The value of _chem_comp_atom.atom_id must uniquely identify
each atom in each monomer in the CHEM_COMP_ATOM list.
|
StrColumn |
ChemCompChir.getAtomId() |
The ID of the atom that is a chiral centre.
|
StrColumn |
ChemCompChirAtom.getAtomId() |
The ID of an atom bonded to the chiral atom.
|
StrColumn |
ChemCompPlaneAtom.getAtomId() |
The ID of an atom involved in the plane.
|
StrColumn |
ChemLinkChir.getAtomId() |
The ID of the atom that is a chiral centre.
|
StrColumn |
ChemLinkChirAtom.getAtomId() |
The ID of an atom bonded to the chiral atom.
|
StrColumn |
ChemLinkPlaneAtom.getAtomId() |
The ID of an atom involved in the plane.
|
StrColumn |
IhmNonPolyFeature.getAtomId() |
The identifier of the non-polymeric atom, if applicable.
|
StrColumn |
IhmPolyAtomFeature.getAtomId() |
The identifier of the atom.
|
StrColumn |
IhmStartingModelCoord.getAtomId() |
The atom identifier/name corresponding to this coordinate position.
|
StrColumn |
PdbxChemCompAtomEdit.getAtomId() |
The identifier for the target atom in imported component to be edited.
|
StrColumn |
PdbxChemCompAtomFeature.getAtomId() |
The identifier for the target atom to which the feature is assigned.
|
StrColumn |
PdbxChemCompAtomRelated.getAtomId() |
The atom identifier/name for the atom mapping
|
StrColumn |
PdbxChemCompModelAtom.getAtomId() |
The value of _pdbx_chem_comp_model_atom.atom_id uniquely identifies
each atom in the PDBX_CHEM_COMP_MODEL_ATOM list.
|
StrColumn |
ChemCompAngle.getAtomId1() |
The ID of the first of the three atoms that define the angle.
|
StrColumn |
ChemCompBond.getAtomId1() |
The ID of the first of the two atoms that define the bond.
|
StrColumn |
ChemCompTor.getAtomId1() |
The ID of the first of the four atoms that define the torsion
angle.
|
StrColumn |
ChemLinkAngle.getAtomId1() |
The ID of the first of the three atoms that define the angle.
|
StrColumn |
ChemLinkBond.getAtomId1() |
The ID of the first of the two atoms that define the bond.
|
StrColumn |
ChemLinkTor.getAtomId1() |
The ID of the first of the four atoms that define the torsion
angle.
|
StrColumn |
IhmCrossLinkRestraint.getAtomId1() |
The atom identifier for the first monomer partner in the cross link.
|
StrColumn |
PdbxChemCompBondEdit.getAtomId1() |
The identifier for the first atom in the target bond
in imported component.
|
StrColumn |
PdbxChemCompModelBond.getAtomId1() |
The ID of the first of the two atoms that define the bond.
|
StrColumn |
PdbxChemCompSubcomponentStructConn.getAtomId1() |
The atom identifier for the first atom in the interaction.
|
StrColumn |
PdbxEntityBranchLink.getAtomId1() |
The atom identifier/name for the first atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getAtomId1() |
The atom identifier/name for the first atom making the linkage.
|
StrColumn |
PdbxLinkedEntityLinkList.getAtomId1() |
The atom identifier/name in the first of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getAtomId1() |
The atom identifier/name in the first of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getAtomId1() |
The atom identifier/name in the first of the two components making
the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getAtomId1() |
The atom identifier/name in the first of the two constituents containing the linkage.
|
StrColumn |
ChemCompAngle.getAtomId2() |
The ID of the second of the three atoms that define the angle.
|
StrColumn |
ChemCompBond.getAtomId2() |
The ID of the second of the two atoms that define the bond.
|
StrColumn |
ChemCompTor.getAtomId2() |
The ID of the second of the four atoms that define the torsion
angle.
|
StrColumn |
ChemLinkAngle.getAtomId2() |
The ID of the second of the three atoms that define the angle.
|
StrColumn |
ChemLinkBond.getAtomId2() |
The ID of the second of the two atoms that define the bond.
|
StrColumn |
ChemLinkTor.getAtomId2() |
The ID of the second of the four atoms that define the torsion
angle.
|
StrColumn |
IhmCrossLinkRestraint.getAtomId2() |
The atom identifier for the second monomer partner in the cross link.
|
StrColumn |
PdbxChemCompBondEdit.getAtomId2() |
The identifier for the second atom in the target bond
in imported component.
|
StrColumn |
PdbxChemCompModelBond.getAtomId2() |
The ID of the second of the two atoms that define the bond.
|
StrColumn |
PdbxChemCompSubcomponentStructConn.getAtomId2() |
The atom identifier for the second atom in the interaction.
|
StrColumn |
PdbxEntityBranchLink.getAtomId2() |
The atom identifier/name for the second atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getAtomId2() |
The atom identifier/name for the second atom making the linkage.
|
StrColumn |
PdbxLinkedEntityLinkList.getAtomId2() |
The atom identifier/name in the second of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getAtomId2() |
The atom identifier/name in the second of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getAtomId2() |
The atom identifier/name in the second of the two components making
the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getAtomId2() |
The atom identifier/name in the second of the two constituents containing the linkage.
|
StrColumn |
ChemCompAngle.getAtomId3() |
The ID of the third of the three atoms that define the angle.
|
StrColumn |
ChemCompTor.getAtomId3() |
The ID of the third of the four atoms that define the torsion
angle.
|
StrColumn |
ChemLinkAngle.getAtomId3() |
The ID of the third of the three atoms that define the angle.
|
StrColumn |
ChemLinkTor.getAtomId3() |
The ID of the third of the four atoms that define the torsion
angle.
|
StrColumn |
ChemCompTor.getAtomId4() |
The ID of the fourth of the four atoms that define the torsion
angle.
|
StrColumn |
ChemLinkTor.getAtomId4() |
The ID of the fourth of the four atoms that define the torsion
angle.
|
StrColumn |
PdbxConnectAtom.getAtomName() |
Uniquely identifies the atom within the component.
|
StrColumn |
PdbxMissingAtomNonpoly.getAtomName() |
Identifier of missing atom.
|
StrColumn |
PdbxMissingAtomPoly.getAtomName() |
Identifier of missing atom.
|
StrColumn |
GeomAngle.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAsymId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAsymId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthAsymId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAsymId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAsymId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAsymId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAsymId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAsymId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteAuthAsymIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthAsymIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthAsymIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAtomId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAtomId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthAtomId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAtomId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthAtomId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAtomId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteAuthAtomId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthAtomId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteAuthAtomIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthAtomIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthAtomIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteAuthCompId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthCompId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthCompId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthCompId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthCompId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthCompId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthCompId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthCompId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthCompId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthCompId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthCompId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthCompId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthCompId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthCompId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthCompId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteAuthCompId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthCompId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthCompId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteAuthCompId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthCompId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteAuthCompIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthCompIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthCompIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthSeqId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthSeqId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteAuthSeqId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteAuthSeqId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteAuthSeqId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthSeqId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteAuthSeqId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteAuthSeqId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteAuthSeqIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthSeqIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteAuthSeqIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteId1() |
The identifier of the first of the three atom sites that define
the angle.
|
StrColumn |
GeomBond.getAtomSiteId1() |
The identifier of the first of the two atom sites that define the
bond.
|
StrColumn |
GeomContact.getAtomSiteId1() |
The identifier of the first of the two atom sites that define the
contact.
|
StrColumn |
GeomTorsion.getAtomSiteId1() |
The identifier of the first of the four atom sites that define
the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteId1() |
The identifier of the first of the three atom sites that define
the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteId1() |
The identifier of the first of the two atom sites that define the
bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteId1() |
The identifier of the first of the four atom sites that define
the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteId2() |
The identifier of the second of the three atom sites that define
the angle.
|
StrColumn |
GeomBond.getAtomSiteId2() |
The identifier of the second of the two atom sites that define
the bond.
|
StrColumn |
GeomContact.getAtomSiteId2() |
The identifier of the second of the two atom sites that define
the contact.
|
StrColumn |
GeomTorsion.getAtomSiteId2() |
The identifier of the second of the four atom sites that define
the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteId2() |
The identifier of the second of the three atom sites that define
the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteId2() |
The identifier of the second of the two atom sites that define
the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteId2() |
The identifier of the second of the four atom sites that define
the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteId3() |
The identifier of the third of the three atom sites that define
the angle.
|
StrColumn |
GeomTorsion.getAtomSiteId3() |
The identifier of the third of the four atom sites that define
the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteId3() |
The identifier of the third of the three atom sites that define
the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteId3() |
The identifier of the third of the four atom sites that define
the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteId4() |
The identifier of the fourth of the four atom sites that define
the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteId4() |
The identifier of the fourth of the four atom sites that define
the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteIdA() |
The identifier of the acceptor-atom site that defines the
hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteIdD() |
The identifier of the donor-atom site that defines the hydrogen
bond.
|
StrColumn |
GeomHbond.getAtomSiteIdH() |
The identifier of the hydrogen-atom site that defines the
hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteLabelAltId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAltId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAltId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAltId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAltId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAltId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAltId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAltId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAltId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAltId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAltId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAltId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAltId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAltId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAltId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAltId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAltId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAltId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAltId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAltId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteLabelAltIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAltIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAltIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAsymId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAsymId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAsymId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAsymId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAsymId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAsymId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAsymId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAsymId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteLabelAsymIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAsymIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAsymIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAtomId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAtomId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelAtomId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAtomId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelAtomId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAtomId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteLabelAtomId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelAtomId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteLabelAtomIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAtomIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelAtomIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomAngle.getAtomSiteLabelCompId1() |
An optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelCompId1() |
An optional identifier of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelCompId1() |
An optional identifier of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelCompId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelCompId1() |
An optional identifier of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelCompId1() |
An optional identifier of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelCompId1() |
An optional identifier of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelCompId2() |
An optional identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
GeomBond.getAtomSiteLabelCompId2() |
An optional identifier of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getAtomSiteLabelCompId2() |
An optional identifier of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getAtomSiteLabelCompId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelCompId2() |
An optional identifier of the second of the three atom sites
that define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualBond.getAtomSiteLabelCompId2() |
An optional identifier of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelCompId2() |
An optional identifier of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getAtomSiteLabelCompId3() |
An optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getAtomSiteLabelCompId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getAtomSiteLabelCompId3() |
An optional identifier of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.value.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelCompId3() |
An optional identifier of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getAtomSiteLabelCompId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getAtomSiteLabelCompId4() |
An optional identifier of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getAtomSiteLabelCompIdA() |
An optional identifier of the acceptor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelCompIdD() |
An optional identifier of the donor-atom site that defines
the hydrogen bond.
|
StrColumn |
GeomHbond.getAtomSiteLabelCompIdH() |
An optional identifier of the hydrogen-atom site that defines
the hydrogen bond.
|
StrColumn |
PdbxEntityBranchLink.getAtomStereoConfig1() |
The chiral configuration of the first atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getAtomStereoConfig1() |
The chiral configuration of the first atom making the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getAtomStereoConfig1() |
The chiral configuration of the first atom making the linkage.
|
StrColumn |
PdbxEntityBranchLink.getAtomStereoConfig2() |
The chiral configuration of the second atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getAtomStereoConfig2() |
The chiral configuration of the second atom making the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getAtomStereoConfig2() |
The chiral configuration of the second atom making the linkage.
|
StrColumn |
PdbxNmrChemShiftRef.getAtomType() |
The value for this tag is a standard IUPAC abbreviation for an element
(i.e., H, C, P, etc).
|
StrColumn |
PdbxNmrEnsembleRms.getAtomType() |
Statistics are often calculated over only some of the atoms,
e.g.
|
StrColumn |
PdbxNmrSpectralDim.getAtomType() |
The value for this tag is a standard IUPAC abbreviation for an element
(i.e., H, C, N, P, etc).
|
StrColumn |
PdbxNmrSystematicChemShiftOffset.getAtomType() |
The kind of atom to which the chemical shift offset value applies.
|
StrColumn |
PdbxBondDistanceLimits.getAtomType1() |
The first atom type defining the bond
|
StrColumn |
PdbxBondDistanceLimits.getAtomType2() |
The first atom type defining the bond
|
StrColumn |
PdbxPhasingMADSetSite.getAtomTypeSymbol() |
_pdbx_phasing_MAD_set_site.atom_type_symbol records the name of site
obtained from MAD phasing.
|
StrColumn |
PhasingMIRDerSite.getAtomTypeSymbol() |
This data item is a pointer to _atom_type.symbol in the
ATOM_TYPE category.
|
StrColumn |
DiffrnRefln.getAttenuatorCode() |
The code identifying the attenuator setting for this reflection.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getAtUnitMatrix() |
Flag indicating unit matrix
|
StrColumn |
PdbxRemediationAtomSiteMapping.getAuthAltId() |
A component of the current atom_site identifier labeling alternate locations.
|
StrColumn |
PdbxSolventAtomSiteMapping.getAuthAltId() |
A component of the current atom_site identifier labeling alternate locations.
|
StrColumn |
AtomSite.getAuthAsymId() |
An alternative identifier for _atom_site.label_asym_id that
may be provided by an author in order to match the identification
used in the publication that describes the structure.
|
StrColumn |
PdbxAtomSiteAnisoTls.getAuthAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxBranchScheme.getAuthAsymId() |
This data item is a pointer to _atom_site.pdbx_auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getAuthAsymId() |
An element of the chemical component instance identifier.
|
StrColumn |
PdbxDccMap.getAuthAsymId() |
The author provided chain id.
|
StrColumn |
PdbxDccRsccMapman.getAuthAsymId() |
The author provided chain id.
|
StrColumn |
PdbxDistantSolventAtoms.getAuthAsymId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxEntityInstanceFeature.getAuthAsymId() |
Author instance identifier (formerly PDB Chain ID)
|
StrColumn |
PdbxFeatureMonomer.getAuthAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxMissingAtomNonpoly.getAuthAsymId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxMissingAtomPoly.getAuthAsymId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxNonstandardList.getAuthAsymId() |
Chain id of the nonstandard group used by the author.
|
StrColumn |
PdbxRefineComponent.getAuthAsymId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getAuthAsymId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxRmchOutlier.getAuthAsymId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxRmsDevsCovByMonomer.getAuthAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxSeqMapDepositorInfo.getAuthAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
|
StrColumn |
PdbxSequencePattern.getAuthAsymId() |
The identifier of the author asym_id of the strand containing
the sequence pattern.
|
StrColumn |
PdbxSolventAtomSiteMapping.getAuthAsymId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getAuthAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxStructGroupComponents.getAuthAsymId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructModResidue.getAuthAsymId() |
Part of the identifier for the modified polymer component.
|
StrColumn |
PdbxStructRefSeqInsertion.getAuthAsymId() |
Part of the author identifier of the inserted residue.
|
StrColumn |
PdbxStructSpecialSymmetry.getAuthAsymId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxSugarPhosphateGeometry.getAuthAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getAuthAsymId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getAuthAsymId() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValChiral.getAuthAsymId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateChiral.getAuthAsymId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateMainChainPlane.getAuthAsymId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanes.getAuthAsymId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanesAtom.getAuthAsymId() |
Part of the identifier of an atom site that defines the plane
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateTorsion.getAuthAsymId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
StructMonNucl.getAuthAsymId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getAuthAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getAuthAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getAuthAsymId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getAuthAsymId1() |
Identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthAsymId1() |
identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthAsymId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthAsymId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthAsymId1() |
Part of the identifier of the first residue in the bond
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthAsymId1() |
Part of the identifier of the first of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAsymId1() |
Part of the identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthAsymId1() |
Part of the identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthAsymId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthAsymId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthAsymId2() |
Identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValBond.getAuthAsymId2() |
identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthAsymId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthAsymId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthAsymId2() |
Part of the identifier of the second residue in the bond
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthAsymId2() |
Part of the identifier of the second of the two atom sites
that define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAsymId2() |
identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthAsymId2() |
Part of the identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthAsymId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthAsymId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthAsymId3() |
Identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAsymId3() |
Part of the identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxStructAssemblyGen.getAuthAsymIdList() |
This data item is a pointer to _atom_site.auth_asym_id in
the ATOM_SITE category.
|
StrColumn |
AtomSite.getAuthAtomId() |
An alternative identifier for _atom_site.label_atom_id that
may be provided by an author in order to match the identification
used in the publication that describes the structure.
|
StrColumn |
PdbxAtomSiteAnisoTls.getAuthAtomId() |
This data item is a pointer to _atom_site.auth_atom_id in the
ATOM_SITE category.
|
StrColumn |
PdbxDistantSolventAtoms.getAuthAtomId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getAuthAtomId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getAuthAtomId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getAuthAtomId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxValidateChiral.getAuthAtomId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_atom_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanesAtom.getAuthAtomId() |
Part of the identifier of an atom site that defines the plane
This data item is a pointer to _atom_site.auth_atom_id in the
ATOM_SITE category.
|
StrColumn |
StructSiteGen.getAuthAtomId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getAuthAtomId1() |
Identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthAtomId1() |
identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthAtomId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthAtomId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthAtomId1() |
Part of the identifier of the first of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAtomId1() |
Part of the identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthAtomId1() |
Part of the identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthAtomId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthAtomId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthAtomId2() |
Identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValBond.getAuthAtomId2() |
identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthAtomId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthAtomId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthAtomId2() |
Part of the identifier of the second of the two atom sites
that define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAtomId2() |
Part of the identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthAtomId2() |
Part of the identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthAtomId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthAtomId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthAtomId3() |
Identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthAtomId3() |
Part of the identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
AtomSite.getAuthCompId() |
An alternative identifier for _atom_site.label_comp_id that
may be provided by an author in order to match the identification
used in the publication that describes the structure.
|
StrColumn |
PdbxAtomSiteAnisoTls.getAuthCompId() |
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxDccMap.getAuthCompId() |
The author provided compound ID (residue name).
|
StrColumn |
PdbxDccRsccMapman.getAuthCompId() |
The author provided compound ID (residue name).
|
StrColumn |
PdbxDistantSolventAtoms.getAuthCompId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxEntityInstanceFeature.getAuthCompId() |
The author provided chemical component identifier
|
StrColumn |
PdbxFeatureMonomer.getAuthCompId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxMissingAtomNonpoly.getAuthCompId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxMissingAtomPoly.getAuthCompId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxRefineComponent.getAuthCompId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getAuthCompId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxRmchOutlier.getAuthCompId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxSolventAtomSiteMapping.getAuthCompId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxStructChemCompDiagnostics.getAuthCompId() |
PDB component ID
|
StrColumn |
PdbxStructChemCompFeature.getAuthCompId() |
PDB component ID
|
StrColumn |
PdbxStructGroupComponents.getAuthCompId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructModResidue.getAuthCompId() |
Part of the identifier for the modified polymer component.
|
StrColumn |
PdbxStructSpecialSymmetry.getAuthCompId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getAuthCompId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getAuthCompId() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValChiral.getAuthCompId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateChiral.getAuthCompId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateMainChainPlane.getAuthCompId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanes.getAuthCompId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanesAtom.getAuthCompId() |
Part of the identifier of an atom site that defines the plane
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateTorsion.getAuthCompId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
StructMonNucl.getAuthCompId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getAuthCompId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getAuthCompId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getAuthCompId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getAuthCompId1() |
Identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthCompId1() |
identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthCompId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthCompId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthCompId1() |
Part of the identifier of the first residue in the bond
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthCompId1() |
Part of the identifier of the first of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthCompId1() |
Part of the identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthCompId1() |
Part of the identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthCompId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthCompId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthCompId2() |
Identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValBond.getAuthCompId2() |
identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthCompId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthCompId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthCompId2() |
Part of the identifier of the second residue in the bond
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthCompId2() |
Part of the identifier of the second of the two atom sites
that define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthCompId2() |
Part of the identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthCompId2() |
Part of the identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthCompId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthCompId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthCompId3() |
Identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthCompId3() |
Part of the identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxDepositGroupIndex.getAuthFileContentType() |
The data content type for this data file within the collection.
|
StrColumn |
PdbxDepositGroupIndex.getAuthFileFormatType() |
The data format for this data file within the collection.
|
StrColumn |
PdbxDepositGroupIndex.getAuthFileLabel() |
A contributor label for this data file within the collection.
|
StrColumn |
PdbxDepositGroupIndex.getAuthFileName() |
The file name for this data file within the collection.
|
StrColumn |
PdbxBranchScheme.getAuthMonId() |
This data item is a pointer to _atom_site.pdbx_auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxNonpolyScheme.getAuthMonId() |
Author provided residue identifier.
|
StrColumn |
PdbxPolySeqScheme.getAuthMonId() |
Author provided residue identifier.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getAuthMonId() |
The monomer type found at this position in the sequence of
the entity or biological unit provided by the depositor.
|
StrColumn |
IhmChemicalComponentDescriptor.getAuthName() |
The author-provided name of the component.
|
StrColumn |
EmAuthorList.getAuthor() |
Author of the EMDB entry in PDB format: Taylor, T.J.
|
StrColumn |
PdbxDatabaseStatus.getAuthorApprovalType() |
This code indicates whether the author's approval for
an entry was received explicitly or implicitly.
|
StrColumn |
DatabasePDBRev.getAuthorName() |
The name of the person responsible for submitting this revision
to the PDB.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getAuthorProvidedFlag() |
A flag to indicate if details about this chemical component instance have been provided by the depositor.
|
StrColumn |
PdbxDatabaseStatus.getAuthorReleaseStatusCode() |
The release status authorized by the depositor.
|
StrColumn |
PdbxNmrSoftware.getAuthors() |
The name of the authors of the software used in this
procedure.
|
StrColumn |
PdbxMissingAtomNonpoly.getAuthPDBInsertId() |
Identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxMissingAtomPoly.getAuthPDBInsertId() |
Identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxRmchOutlier.getAuthPDBInsertId() |
Identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValChiral.getAuthPDBInsertId() |
Identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValAngle.getAuthPDBInsertId1() |
Optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthPDBInsertId1() |
Optional identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthPDBInsertId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValSymContact.getAuthPDBInsertId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthPDBInsertId2() |
Optional identifier of the second of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthPDBInsertId2() |
Optional identifier of the second of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthPDBInsertId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValSymContact.getAuthPDBInsertId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthPDBInsertId3() |
Optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxDatabaseStatus.getAuthReqRelDate() |
The release date requested by the depositor.
|
StrColumn |
PdbxAtomSiteAnisoTls.getAuthSeqId() |
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getAuthSeqId() |
An element of the chemical component instance identifier.
|
StrColumn |
PdbxDccMap.getAuthSeqId() |
The author provided residue number.
|
StrColumn |
PdbxDccRsccMapman.getAuthSeqId() |
The author provided residue number.
|
StrColumn |
PdbxDistantSolventAtoms.getAuthSeqId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxFeatureMonomer.getAuthSeqId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxMissingAtomNonpoly.getAuthSeqId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxMissingAtomPoly.getAuthSeqId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxNonstandardList.getAuthSeqId() |
Residue number of the nonstandard group used by the
author.
|
StrColumn |
PdbxRefineComponent.getAuthSeqId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getAuthSeqId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxRmchOutlier.getAuthSeqId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxRmsDevsCovByMonomer.getAuthSeqId() |
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxSolventAtomSiteMapping.getAuthSeqId() |
A component of the current atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getAuthSeqId() |
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxStructChemCompDiagnostics.getAuthSeqId() |
PDB position in the sequence.
|
StrColumn |
PdbxStructChemCompFeature.getAuthSeqId() |
PDB position in the sequence.
|
StrColumn |
PdbxStructGroupComponents.getAuthSeqId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructRefSeqInsertion.getAuthSeqId() |
Part of the author identifier of the inserted residue.
|
StrColumn |
PdbxStructSpecialSymmetry.getAuthSeqId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxSugarPhosphateGeometry.getAuthSeqId() |
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getAuthSeqId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getAuthSeqId() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValChiral.getAuthSeqId() |
Identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateChiral.getAuthSeqId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateMainChainPlane.getAuthSeqId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanes.getAuthSeqId() |
Part of the identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanesAtom.getAuthSeqId() |
Part of the identifier of an atom site that defines the plane
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateTorsion.getAuthSeqId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
StructMonNucl.getAuthSeqId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getAuthSeqId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getAuthSeqId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getAuthSeqId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getAuthSeqId1() |
Identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValBond.getAuthSeqId1() |
identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthSeqId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthSeqId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthSeqId1() |
Part of the identifier of the first residue in the bond
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthSeqId1() |
Part of the identifier of the first of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthSeqId1() |
Part of the identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthSeqId1() |
Part of the identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthSeqId1() |
Part of the identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthSeqId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthSeqId2() |
Identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValBond.getAuthSeqId2() |
identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValContact.getAuthSeqId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getAuthSeqId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getAuthSeqId2() |
Part of the identifier of the second residue in the bond
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getAuthSeqId2() |
Part of the identifier of the second of the two atom sites
that define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthSeqId2() |
Part of the identifier of the second of the three atom sites
that define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getAuthSeqId2() |
Part of the identifier of the second of the two atom sites
that define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getAuthSeqId2() |
Part of the identifier of the second of the two atom sites
that define the close contact.
|
StrColumn |
PdbxValSymContact.getAuthSeqId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getAuthSeqId3() |
Identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdAngle.getAuthSeqId3() |
Part of the identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxBranchScheme.getAuthSeqNum() |
This data item is a pointer to _atom_site.pdbx_auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxEntityInstanceFeature.getAuthSeqNum() |
Author provided residue number.
|
StrColumn |
PdbxNonpolyScheme.getAuthSeqNum() |
Author provided residue numbering.
|
StrColumn |
PdbxPolySeqScheme.getAuthSeqNum() |
Author provided residue number.
|
StrColumn |
EmHelicalEntity.getAxialSymmetry() |
Symmetry of the helical axis, either cyclic (Cn) or dihedral (Dn), where n>=1.
|
StrColumn |
EmMap.getAxisOrderFast() |
The map axis that corresponds to Columns.
|
StrColumn |
EmMap.getAxisOrderMedium() |
The map axis that corresponds to Rows.
|
StrColumn |
EmMap.getAxisOrderSlow() |
The map axis that corresponds to Sections.
|
StrColumn |
IhmGeometricObjectAxis.getAxisType() |
The type of axis.
|
StrColumn |
PdbxDomainRange.getBegAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxRefineTlsGroup.getBegAuthAsymId() |
A component of the identifier for the residue at which the
TLS fragment range begins.
|
StrColumn |
PdbxSequenceRange.getBegAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegAuthAsymId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getBegAuthAsymId() |
A component of the identifier for the residue at which the
conformation segment begins.
|
StrColumn |
StructNcsDomLim.getBegAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
StructSheetRange.getBegAuthAsymId() |
A component of the identifier for the residue at which the
beta-sheet range begins.
|
StrColumn |
PdbxDomainRange.getBegAuthCompId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxSequenceRange.getBegAuthCompId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegAuthCompId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getBegAuthCompId() |
A component of the identifier for the residue at which the
conformation segment begins.
|
StrColumn |
StructNcsDomLim.getBegAuthCompId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
StructSheetRange.getBegAuthCompId() |
A component of the identifier for the residue at which the
beta-sheet range begins.
|
StrColumn |
PdbxStructRefSeqFeature.getBegAuthMonId() |
Monomer ID at the initial position in the PDB sequence segment.
|
StrColumn |
PdbxDomainRange.getBegAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxRefineTlsGroup.getBegAuthSeqId() |
A component of the identifier for the residue at which the
TLS fragment range begins.
|
StrColumn |
PdbxSequenceRange.getBegAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegAuthSeqId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
PdbxStructRefSeqFeature.getBegAuthSeqId() |
Initial position in the PDB sequence segment.
|
StrColumn |
StructNcsDomLim.getBegAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxStructRefSeqFeatureProp.getBegDbMonId() |
The begining monomer type found at the starting position
in the referenced database entry.
|
StrColumn |
PdbxDbref.getBeginInsCode() |
Insertion code.
|
StrColumn |
PdbxEntityPolyDomain.getBeginMonId() |
The value of _pdbx_entity_poly_domain.begin_mon_id identifies
the monomer at the beginning of the domain.
|
StrColumn |
PdbxDbref.getBeginResNumber() |
First residue number.
|
StrColumn |
PdbxDomainRange.getBegLabelAltId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxSequenceRange.getBegLabelAltId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegLabelAltId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructNcsDomLim.getBegLabelAltId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxDomainRange.getBegLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxRefineTlsGroup.getBegLabelAsymId() |
A component of the identifier for the residue at which the
TLS fragment range begins.
|
StrColumn |
PdbxSequenceRange.getBegLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegLabelAsymId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getBegLabelAsymId() |
A component of the identifier for the residue at which the
conformation segment begins.
|
StrColumn |
StructNcsDomLim.getBegLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
StructSheetRange.getBegLabelAsymId() |
A component of the identifier for the residue at which the
beta-sheet range begins.
|
StrColumn |
PdbxDomainRange.getBegLabelCompId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
PdbxSequenceRange.getBegLabelCompId() |
A component of the identifier for the monomer at which this
segment of the sequence range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegLabelCompId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getBegLabelCompId() |
A component of the identifier for the residue at which the
conformation segment begins.
|
StrColumn |
StructNcsDomLim.getBegLabelCompId() |
A component of the identifier for the monomer at which this
segment of the domain begins.
|
StrColumn |
StructSheetRange.getBegLabelCompId() |
A component of the identifier for the residue at which the
beta-sheet range begins.
|
StrColumn |
PdbxStructRefSeqFeature.getBegPdbInsCode() |
Initial insertion code of the PDB sequence segment.
|
StrColumn |
PdbxRefineTlsGroup.getBegPDBInsCode() |
A component of the identifier for the residue at which the
TLS fragment range begins.
|
StrColumn |
PdbxStructGroupComponentRange.getBegPDBInsCode() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
PdbxStructRefSeqFeature.getBegSeqNum() |
Initial position in the sequence segment.
|
StrColumn |
IhmInterfaceResidueFeature.getBindingPartnerAsymId() |
An asym/strand identifier for the binding partner at the interface, if applicable.
|
StrColumn |
IhmInterfaceResidueFeature.getBindingPartnerEntityId() |
The entity identifier of the binding partner at the interface.
|
StrColumn |
PdbxEntityFuncEnzyme.getBindModeId() |
This data item is pointer to _pdbx_entity_func_bind_mode.id in the
PDBX_ENTITY_FUNC_BIND_MODE category.
|
StrColumn |
PdbxEntityFuncOther.getBindModeId() |
This data item is pointer to _pdbx_entity_func_bind_mode.id in the
PDBX_ENTITY_FUNC_BIND_MODE category.
|
StrColumn |
PdbxEntityFuncRegulatory.getBindModeId() |
This data item is pointer to _pdbx_entity_func_bind_mode.id in the
PDBX_ENTITY_FUNC_BIND_MODE category.
|
StrColumn |
PdbxEntityFuncStructural.getBindModeId() |
This data item is pointer to _pdbx_entity_func_bind_mode.id in the
PDBX_ENTITY_FUNC_BIND_MODE category.
|
StrColumn |
PdbxEntityAssembly.getBiolId() |
An identifier for the assembly.
|
StrColumn |
PdbxStructAssemblyProp.getBiolId() |
The identifier for the assembly used in category PDBX_STRUCT_ASSEMBLY.
|
StrColumn |
PdbxStructAssemblyPropDepositorInfo.getBiolId() |
The identifier for the assembly used in category STRUCT_BIOL.
|
StrColumn |
PdbxStructBiolFunc.getBiolId() |
This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
category.
|
StrColumn |
StructBiolGen.getBiolId() |
This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
category.
|
StrColumn |
StructBiolKeywords.getBiolId() |
This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
category.
|
StrColumn |
StructBiolView.getBiolId() |
This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
category.
|
StrColumn |
StructRef.getBiolId() |
This data item is a pointer to _struct_biol.id in the
STRUCT_BIOL category.
|
StrColumn |
AuditLink.getBlockCode() |
The value of _audit_block.code associated with a data block
in the current file related to the current data block.
|
StrColumn |
AuditLink.getBlockDescription() |
A textual description of the relationship of the referenced
data block to the current one.
|
StrColumn |
PdbxConnectAtom.getBondType() |
Bond type.
|
StrColumn |
Citation.getBookIdISBN() |
The International Standard Book Number (ISBN) code assigned to
the book cited; relevant for books or book chapters.
|
StrColumn |
Citation.getBookPublisher() |
The name of the publisher of the citation; relevant
for books or book chapters.
|
StrColumn |
Citation.getBookPublisherCity() |
The location of the publisher of the citation; relevant
for books or book chapters.
|
StrColumn |
Citation.getBookTitle() |
The title of the book in which the citation appeared; relevant
for books or book chapters.
|
StrColumn |
EmBufferComponent.getBufferId() |
Foreign key to the entry category.
|
StrColumn |
EmSamplePreparation.getBufferId() |
This data item is a pointer to _em_buffer.id in the
BUFFER category.
|
StrColumn |
PdbxBufferComponents.getBufferId() |
This data item is a pointer to _pdbx_buffer.id in the BUFFER category.
|
StrColumn |
PdbxEntitySrcGenLysis.getBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxSolnScatter.getBufferName() |
The name of the buffer used for the sample in the solution scattering
experiment.
|
StrColumn |
AtomSite.getCalcAttachedAtom() |
The _atom_site.id of the atom site to which the
'geometry-calculated' atom site is attached.
|
StrColumn |
AtomSite.getCalcFlag() |
A standard code to signal whether the site coordinates have been
determined from the intensities or calculated from the geometry
of surrounding sites, or have been assigned dummy values.
|
StrColumn |
PdbxNmrChemShiftReference.getCarbonShiftsFlag() |
A value indicating if 13C chemical shifts are being deposited and if IUPAC chemical shift referencing was used.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getCarrierSolvent() |
For continuous sample flow experiments, the carrier buffer used
to move the sample into the beam.
|
StrColumn |
AtomSites.getCartnTransformAxes() |
A description of the relative alignment of the crystal cell
axes to the Cartesian orthogonal axes as applied in the
transformation matrix _atom_sites.Cartn_transf_matrix[][].
|
StrColumn |
EmSoftware.getCategory() |
The purpose of the software.
|
StrColumn |
PdbxAuditRevisionCategory.getCategory() |
The category updated in the pdbx_audit_revision_category record.
|
StrColumn |
PdbxViewCategory.getCategoryId() |
The mmCIF category identifier.
|
StrColumn |
PdbxViewItem.getCategoryId() |
A pointer to the category_id in the PDBX_VIEW_CATEGORY category.
|
StrColumn |
PdbxViewCategory.getCategoryViewName() |
An alias name for the mmCIF category in this view.
|
StrColumn |
EmEntityAssemblyNaturalsource.getCell() |
The cell type from which the component was obtained.
|
StrColumn |
EmEntityAssemblyRecombinant.getCell() |
The cell of the host organism from which the expressed component was
obtained, if relevant.
|
StrColumn |
Computing.getCellRefinement() |
Software used for cell refinement.
|
StrColumn |
Symmetry.getCellSetting() |
The cell settings for this space-group symmetry.
|
StrColumn |
EmEntityAssemblyNaturalsource.getCellularLocation() |
The cellular location of the component.
|
StrColumn |
PdbxCoord.getChainAtomsYP() |
Gives information if the coordinates for the main chain atoms
are available.
|
StrColumn |
PdbxDbref.getChainId() |
Chain id.
|
StrColumn |
PdbxUnpair.getChainId() |
Strand id.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getChainIdList() |
This data item is the author provided chain names for the
assembly
This item may be expressed as a comma separated list of identifiers.
|
StrColumn |
PdbxNmrEnsembleRms.getChainRangeBegin() |
The beginning chain id.
|
StrColumn |
PdbxNmrEnsembleRms.getChainRangeEnd() |
The ending chain id:
|
StrColumn |
PdbxReferenceEntityNonpoly.getChemCompId() |
For non-polymer entities, the identifier corresponding
to the chemical definition for the molecule.
|
StrColumn |
PdbxReferenceEntitySubcomponents.getChemCompId() |
For entities represented as single molecules, the identifier
corresponding to the chemical definition for the molecule.
|
StrColumn |
PdbxReferenceMolecule.getChemCompId() |
For entities represented as single molecules, the identifier
corresponding to the chemical definition for the molecule.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getChemCompId() |
For entities represented as single molecules, the identifier
corresponding to the chemical definition for the molecule.
|
StrColumn |
PdbxReferenceMoleculeFeatures.getChemCompId() |
For entities represented as single molecules, the identifier
corresponding to the chemical definition for the molecule.
|
StrColumn |
PdbxReferenceMoleculeSynonyms.getChemCompId() |
For entities represented as single molecules, the identifier
corresponding to the chemical definition for the molecule.
|
StrColumn |
IhmChemicalComponentDescriptor.getChemicalName() |
The chemical name of the component.
|
StrColumn |
PdbxNmrChemShiftRef.getChemShiftUnits() |
Units for the chemical shift value assigned to the atoms of the chemical
shift reference.
|
StrColumn |
PdbxValChiral.getChiralCenterAtomAltId() |
Identifier of chiral center atom alt ID.
|
StrColumn |
PdbxValChiral.getChiralCenterAtomName() |
Identifier of chiral center atom.
|
StrColumn |
PdbxValChiral.getChiralNeighborAtomAltId() |
Identifier of chiral neighbor alt ID.
|
StrColumn |
PdbxValChiral.getChiralNeighborAtomName() |
Identifier of chiral neighbor atom.
|
StrColumn |
ChemCompChirAtom.getChirId() |
This data item is a pointer to _chem_comp_chir.id in the
CHEM_COMP_CHIR category.
|
StrColumn |
ChemLinkChirAtom.getChirId() |
This data item is a pointer to _chem_link_chir.id in the
CHEM_LINK_CHIR category.
|
StrColumn |
EmImagingOptics.getChrAberrationCorrector() |
Chromatic aberration corrector information
|
StrColumn |
CitationAuthor.getCitationId() |
This data item is a pointer to _citation.id in the CITATION
category.
|
StrColumn |
CitationEditor.getCitationId() |
This data item is a pointer to _citation.id in the CITATION
category.
|
StrColumn |
Em2dProjectionSelection.getCitationId() |
This data item is a pointer to _citation.id in the
CITATION category.
|
StrColumn |
Em3dReconstruction.getCitationId() |
This data item is a pointer to _citation.id in the
CITATION category.
|
StrColumn |
EmImageScans.getCitationId() |
This data item is a pointer to _citation.id
in the CITATION category.
|
StrColumn |
EmImaging.getCitationId() |
This data item is a pointer to _citation.id in
the CITATION category.
|
StrColumn |
EmSampleSupport.getCitationId() |
This data item is a pointer to _citation.id
in the CITATION category.
|
StrColumn |
EmVitrification.getCitationId() |
This data item is a pointer to _citation.id in the
CITATION category.
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getCitationId() |
A link to related reference information in the citation category.
|
StrColumn |
PdbxReRefinement.getCitationId() |
A pointer to _citation.id in category CITATION describing the
the citation of the entry from from which the experimental data
was obtained.
|
StrColumn |
Software.getCitationId() |
This data item is a pointer to _citation.id in the CITATION
category.
|
StrColumn |
PdbxContactAuthor.getCity() |
The mailing address of the author of the data block to whom
correspondence should be addressed, city.
|
StrColumn |
PdbxConnect.getClass1() |
Internal classification type 1.
|
StrColumn |
PdbxConnect.getClass2() |
Internal classification type 2.
|
StrColumn |
DiffrnRefln.getClassCode() |
The code identifying the class to which this reflection has
been assigned.
|
StrColumn |
Refln.getClassCode() |
The code identifying the class to which this reflection has been
assigned.
|
StrColumn |
PdbxReferenceMolecule.getClassEvidenceCode() |
Evidence for the assignment of _pdbx_reference_molecule.class
|
StrColumn |
PdbxNmrSoftware.getClassification() |
The purpose of the software.
|
StrColumn |
Software.getClassification() |
The classification of the program according to its
major function.
|
StrColumn |
PdbxChemCompSubcomponentEntityList.getClazz() |
Defines the predominant linking type of the entity.
|
StrColumn |
PdbxConstruct.getClazz() |
The primary function of the construct.
|
StrColumn |
PdbxEntityPolyProteinClass.getClazz() |
This data item provides a top-level classification
of the polymer protein entity.
|
StrColumn |
PdbxLinkedEntity.getClazz() |
Broadly defines the function of this molecule.
|
StrColumn |
PdbxMoleculeFeatures.getClazz() |
Broadly defines the function of the molecule.
|
StrColumn |
PdbxMoleculeFeaturesDepositorInfo.getClazz() |
Broadly defines the function of the molecule.
|
StrColumn |
PdbxReferenceLinkedEntity.getClazz() |
Broadly classifies of this linked entity example.
|
StrColumn |
PdbxReferenceMolecule.getClazz() |
Broadly defines the function of the entity.
|
StrColumn |
RefineBIso.getClazz() |
A class of atoms treated similarly for isotropic B-factor
(displacement-parameter) refinement.
|
StrColumn |
RefineOccupancy.getClazz() |
The class of atoms treated similarly for occupancy refinement.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getCleavageBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxEntitySrcGenCloneLigation.getCleavageEnzymes() |
The names of the enzymes used to cleave the vector.
|
StrColumn |
PhasingMADRatio.getClustId() |
This data item is a pointer to _phasing_MAD_clust.id in
the PHASING_MAD_CLUST category.
|
StrColumn |
PhasingMADSet.getClustId() |
This data item is a pointer to _phasing_MAD_clust.id in
the PHASING_MAD_CLUST category.
|
StrColumn |
DiffrnAttenuator.getCode() |
A code associated with a particular attenuator setting.
|
StrColumn |
DiffrnReflnsClass.getCode() |
The code identifying a certain reflection class.
|
StrColumn |
DiffrnScaleGroup.getCode() |
The value of _diffrn_scale_group.code must uniquely identify a
record in the DIFFRN_SCALE_GROUP list.
|
StrColumn |
DiffrnStandardRefln.getCode() |
The code identifying a reflection measured as a standard
reflection with the indices _diffrn_standard_refln.index_h,
_diffrn_standard_refln.index_k and
_diffrn_standard_refln.index_l.
|
StrColumn |
RefineLsClass.getCode() |
The code identifying a certain reflection class.
|
StrColumn |
ReflnsClass.getCode() |
The code identifying a certain reflection class.
|
StrColumn |
StructNcsOper.getCode() |
A code to indicate whether this operator describes a
relationship between coordinates all of which are given in the
data block (in which case the value of code is 'given'), or
whether the operator is used to generate new coordinates from
those that are given in the data block (in which case the value
of code is 'generate').
|
StrColumn |
Database.getCodeCAS() |
The code assigned by Chemical Abstracts.
|
StrColumn |
Database.getCodeCSD() |
The code assigned by the Cambridge Structural Database.
|
StrColumn |
Database.getCodeDepnumCcdcArchive() |
Deposition numbers assigned by the Cambridge Crystallographic
Data Centre (CCDC) to files containing structural information
archived by the CCDC.
|
StrColumn |
Database.getCodeDepnumCcdcFiz() |
Deposition numbers assigned by the Fachinformationszentrum
Karlsruhe (FIZ) to files containing structural information
archived by the Cambridge Crystallographic Data Centre (CCDC).
|
StrColumn |
Database.getCodeDepnumCcdcJournal() |
Deposition numbers assigned by various journals to files
containing structural information archived by the Cambridge
Crystallographic Data Centre (CCDC).
|
StrColumn |
Database.getCodeICSD() |
The code assigned by the Inorganic Crystal Structure
Database.
|
StrColumn |
Database.getCodeMDF() |
The code assigned by the Metals Data File.
|
StrColumn |
Journal.getCodenASTM() |
Journal data items are defined by the journal staff.
|
StrColumn |
Database.getCodeNBS() |
The code assigned by the NBS (NIST) Crystal Data Database.
|
StrColumn |
Journal.getCodenCambridge() |
Journal data items are defined by the journal staff.
|
StrColumn |
Database.getCodePDB() |
The code assigned by the Protein Data Bank.
|
StrColumn |
Database.getCodePDF() |
The code assigned by the Powder Diffraction File (JCPDS/ICDD).
|
StrColumn |
Journal.getCoeditorAddress() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorCode() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorEmail() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorFax() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorName() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorNotes() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getCoeditorPhone() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxNmrComputing.getCollection() |
Enter the name of the software used for data collection.
|
StrColumn |
PdbxNmrComputing.getCollectionVersion() |
Enter the version of the software used for data collection.
|
StrColumn |
DiffrnRadiation.getCollimation() |
The collimation or focusing applied to the radiation.
|
StrColumn |
PdbxSerialCrystallographyMeasurement.getCollimation() |
The collimation or type of focusing optics applied to the radiation.
|
StrColumn |
ExptlCrystal.getColour() |
The colour of the crystal.
|
StrColumn |
ExptlCrystal.getColourLustre() |
The enumeration list of standardized names developed for the
International Centre for Diffraction Data.
|
StrColumn |
ExptlCrystal.getColourModifier() |
The enumeration list of standardized names developed for the
International Centre for Diffraction Data.
|
StrColumn |
ExptlCrystal.getColourPrimary() |
The enumeration list of standardized names developed for the
International Centre for Diffraction Data.
|
StrColumn |
PdbxColumninfo.getColumnname() |
SQL column name.
|
StrColumn |
PdbxEntitySrcGenChrom.getColumnType() |
The type of column used in this step.
|
StrColumn |
EntitySrcNat.getCommonName() |
The common name of the organism from which the entity
was isolated.
|
StrColumn |
IhmChemicalComponentDescriptor.getCommonName() |
The common name of the component.
|
StrColumn |
ChemCompAngle.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompAtom.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompBond.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompChir.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompChirAtom.getCompId() |
This data item is a pointer to _chem_comp.id in the
CHEM_COMP category.
|
StrColumn |
ChemCompPlane.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompPlaneAtom.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompTor.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
ChemCompTorValue.getCompId() |
This data item is a pointer to _chem_comp_atom.comp_id in the
CHEM_COMP_ATOM category.
|
StrColumn |
IhmHydroxylRadicalFpRestraint.getCompId() |
The component identifier for the residue.
|
StrColumn |
IhmNonPolyFeature.getCompId() |
The component identifier of the non-polymer feature.
|
StrColumn |
IhmPolyAtomFeature.getCompId() |
The component identifier of the atom.
|
StrColumn |
IhmPolyProbePosition.getCompId() |
The component identifier of the residue in the entity where the probe is attached.
|
StrColumn |
IhmStartingModelCoord.getCompId() |
The component identifier corresponding to this coordinate position.
|
StrColumn |
IhmStartingModelSeqDif.getCompId() |
The component identifier for the residue.
|
StrColumn |
PdbxChemCompAtomEdit.getCompId() |
This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompAtomFeature.getCompId() |
This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompAtomRelated.getCompId() |
The chemical component for which this relationship applies.
|
StrColumn |
PdbxChemCompAudit.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompBondEdit.getCompId() |
This data item is a pointer to _pdbx_chem_comp_import.comp_id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompDepositorInfo.getCompId() |
The chemical component identifier used by the depositor to represent this component.
|
StrColumn |
PdbxChemCompDescriptor.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompFeature.getCompId() |
The component identifier for this feature.
|
StrColumn |
PdbxChemCompIdentifier.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompImport.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getCompId() |
An element of the chemical component instance identifier.
|
StrColumn |
PdbxChemCompModel.getCompId() |
An identifier for chemical component definition.
|
StrColumn |
PdbxChemCompNonstandard.getCompId() |
This data item is a pointer to _chem_comp.id in the
CHEM_COMP category.
|
StrColumn |
PdbxChemCompRelated.getCompId() |
The chemical component for which this relationship applies.
|
StrColumn |
PdbxChemCompSynonyms.getCompId() |
The chemical component for which this synonym applies.
|
StrColumn |
PdbxChemCompUploadDepositorInfo.getCompId() |
The chemical component identifier used by the depositor to represent this component.
|
StrColumn |
PdbxEntityBranchList.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxEntityInstanceFeature.getCompId() |
Chemical component identifier
|
StrColumn |
PdbxEntityNonpoly.getCompId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP category.
|
StrColumn |
PdbxExptlCrystalGrowComp.getCompId() |
The value of _exptl_crystal_grow_comp.comp_id must uniquely identify
each item in the PDBX_EXPTL_CRYSTAL_GROW_COMP list.
|
StrColumn |
PdbxReferenceLinkedEntityCompList.getCompId() |
The component identifer for the constituent within the linked entity..
|
StrColumn |
PdbxStructRefSeqDeletion.getCompId() |
The monomer name found at this position in the referenced
database entry.
|
StrColumn |
PdbxStructRefSeqInsertion.getCompId() |
Part of the identifier of the inserted residue.
|
StrColumn |
IhmCrossLinkList.getCompId1() |
The component identifier for the first monomer partner in the cross link.
|
StrColumn |
IhmCrossLinkRestraint.getCompId1() |
The component identifier for the first monomer partner in the cross link.
|
StrColumn |
IhmPredictedContactRestraint.getCompId1() |
The component identifier for the first monomer partner in the predicted contact.
|
StrColumn |
PdbxChemCompSubcomponentStructConn.getCompId1() |
The component identifier for the first atom in the interaction.
|
StrColumn |
PdbxEntityBranchLink.getCompId1() |
The component identifier for the first component making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getCompId1() |
The component identifier for the first component making the linkage.
|
StrColumn |
PdbxLinkedEntityLinkList.getCompId1() |
The component identifier in the first of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getCompId1() |
The component identifier in the first of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getCompId1() |
The component identifier in the first of the two components making the
linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getCompId1() |
The component identifier in the first of the two constituents containing the linkage.
|
StrColumn |
IhmCrossLinkList.getCompId2() |
The component identifier for the second monomer partner in the cross link.
|
StrColumn |
IhmCrossLinkRestraint.getCompId2() |
The component identifier for the second monomer partner in the cross link.
|
StrColumn |
IhmPredictedContactRestraint.getCompId2() |
The component identifier for the second monomer partner in the predicted contact.
|
StrColumn |
PdbxChemCompSubcomponentStructConn.getCompId2() |
The component identifier for the second atom in the interaction.
|
StrColumn |
PdbxEntityBranchLink.getCompId2() |
The component identifier for the second component making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getCompId2() |
The component identifier for the second component making the linkage.
|
StrColumn |
PdbxLinkedEntityLinkList.getCompId2() |
The component identifier in the second of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getCompId2() |
The component identifier in the second of the two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getCompId2() |
The component identifier in the second of the two components making the
linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getCompId2() |
The component identifier in the second of the two constituents containing the linkage.
|
StrColumn |
IhmEntityPolySegment.getCompIdBegin() |
The leading monomer component of the polymeric segment.
|
StrColumn |
IhmPolyResidueFeature.getCompIdBegin() |
The component identifier of the beginning residue / residue range.
|
StrColumn |
IhmResiduesNotModeled.getCompIdBegin() |
The starting residue for the sequence segment of missing residues.
|
StrColumn |
IhmEntityPolySegment.getCompIdEnd() |
The trailing monomer component of the polymeric segment.
|
StrColumn |
IhmPolyResidueFeature.getCompIdEnd() |
The component identifier of the ending residue / residue range.
|
StrColumn |
IhmResiduesNotModeled.getCompIdEnd() |
The ending residue for the sequence segment of missing residues.
|
StrColumn |
Software.getCompilerName() |
The compiler used to compile the software.
|
StrColumn |
Software.getCompilerVersion() |
The version of the compiler used to compile the software.
|
StrColumn |
PdbxExptlCrystalGrowComp.getCompName() |
A common name for the component of the solution.
|
StrColumn |
PdbxNmrExptlSample.getComponent() |
The name of each component in the sample
|
StrColumn |
EmAssembly.getComposition() |
The composition of the assembly.
|
StrColumn |
PdbxEntryDetails.getCompoundDetails() |
Additional details about the macromolecular compounds in this entry.
|
StrColumn |
PdbxReferenceMolecule.getCompoundDetails() |
Special details about this molecule.
|
StrColumn |
Chemical.getCompoundSource() |
Description of the source of the compound under study, or of the
parent molecule if a simple derivative is studied.
|
StrColumn |
ExptlCrystalGrowComp.getConc() |
The concentration of the solution component.
|
StrColumn |
PdbxBufferComponents.getConc() |
The millimolar concentration of buffer component.
|
StrColumn |
PdbxEntitySrcGenPure.getConcAssayMethod() |
The method used to measure the protein concentration
|
StrColumn |
PdbxEntitySrcGenPure.getConcDetails() |
Details of the protein concentration procedure
|
StrColumn |
PdbxEntitySrcGenPure.getConcDeviceId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxNmrExptlSample.getConcentrationRange() |
The concentration range for the component.
|
StrColumn |
PdbxSolnScatter.getConcentrationRange() |
The concentration range (mg/mL) of the complex in the
sample used in the solution scattering experiment to
determine the mean radius of structural elongation.
|
StrColumn |
EmBufferComponent.getConcentrationUnits() |
Units for the sample concentration value.
|
StrColumn |
PdbxNmrExptlSample.getConcentrationUnits() |
The concentration units of the component.
|
StrColumn |
PdbxExptlCrystalGrowComp.getConcRange() |
The concentration range of the solution component.
|
StrColumn |
PdbxBufferComponents.getConcUnits() |
The concentration units of the component.
|
StrColumn |
PdbxExptlCrystalGrowComp.getConcUnits() |
The concentration units for the solution component.
|
StrColumn |
IhmCrossLinkRestraint.getConditionalCrosslinkFlag() |
The cross link conditionality.
|
StrColumn |
PdbxNmrExptl.getConditionsId() |
The number to identify the set of sample conditions.
|
StrColumn |
PdbxNmrExptlSampleConditions.getConditionsId() |
The condition number as defined above.
|
StrColumn |
PdbxNmrAssignedChemShiftList.getConditionsLabel() |
Pointer to 'pdbx_nmr_exptl_sample_conditions.label'.
|
StrColumn |
PdbxNmrSpectralPeakList.getConditionsLabel() |
Pointer to 'pdbx_nmr_exptl_sample_conditions.label'.
|
StrColumn |
PdbxNaStructKeywds.getConformationType() |
Provides overall idea about conformation type of NA.
|
StrColumn |
PdbxNmrRepresentative.getConformerId() |
If a member of the ensemble has been selected as a representative
structure, identify it by its model number.
|
StrColumn |
PdbxNmrEnsemble.getConformerSelectionCriteria() |
By highlighting the appropriate choice(s), describe how the submitted
conformer (models) were selected.
|
StrColumn |
PdbxSolnScatterModel.getConformerSelectionCriteria() |
A description of the conformer selection criteria
used.
|
StrColumn |
StructConf.getConfTypeId() |
This data item is a pointer to _struct_conf_type.id in the
STRUCT_CONF_TYPE category.
|
StrColumn |
PdbxConnectAtom.getConnectTo() |
Identifies a connected atom within the component.
|
StrColumn |
StructConn.getConnTypeId() |
This data item is a pointer to _struct_conn_type.id in the
STRUCT_CONN_TYPE category.
|
StrColumn |
PdbxNmrConstraintFile.getConstraintFilename() |
Name of the uploaded file that contains the constraint data.
|
StrColumn |
AtomSite.getConstraints() |
A description of the constraints applied to parameters at this
site during refinement.
|
StrColumn |
PdbxNmrConstraintFile.getConstraintSubtype() |
Specific type of constraint.
|
StrColumn |
PdbxNmrConstraintFile.getConstraintType() |
The general type of constraint (distance, torsion angle, RDC, etc.)
|
StrColumn |
PdbxConstructFeature.getConstructId() |
The value of _pdbx_construct_feature.construct_id uniquely
identifies the construct with which the feature is
associated.
|
StrColumn |
Publ.getContactAuthor() |
The name and address of the author submitting the manuscript and
data block.
|
StrColumn |
Software.getContactAuthor() |
The recognized contact author of the software.
|
StrColumn |
Publ.getContactAuthorAddress() |
The address of the author submitting the manuscript and data
block.
|
StrColumn |
Publ.getContactAuthorEmail() |
E-mail address in a form recognizable to international networks.
|
StrColumn |
Software.getContactAuthorEmail() |
The e-mail address of the person specified in
_software.contact_author.
|
StrColumn |
Publ.getContactAuthorFax() |
Facsimile telephone number of the author submitting the
manuscript and data block.
|
StrColumn |
Publ.getContactAuthorName() |
The name of the author submitting the manuscript and data
block.
|
StrColumn |
Publ.getContactAuthorPhone() |
Telephone number of the author submitting the manuscript and
data block.
|
StrColumn |
Publ.getContactLetter() |
A letter submitted to the journal editor by the contact author.
|
StrColumn |
PdbxDepositionMessageFileReference.getContentFormat() |
The content format of the referenced data file.
|
StrColumn |
PdbxNmrSampleDetails.getContents() |
A complete description of each NMR sample.
|
StrColumn |
PublBody.getContents() |
A text section of a paper.
|
StrColumn |
IhmExternalFiles.getContentType() |
The type of content in the file.
|
StrColumn |
PdbxDatabaseMessage.getContentType() |
This code defines the content of the message.
|
StrColumn |
PdbxDatabaseRelated.getContentType() |
The identifying content type of the related entry.
|
StrColumn |
PdbxDepositionMessageFileReference.getContentType() |
The content type of the referenced data file.
|
StrColumn |
PdbxDepositionMessageInfo.getContentType() |
A the message content type or class.
|
StrColumn |
PdbxDepositionMessageInfo.getContentValue() |
A the specific value of the content type or class
|
StrColumn |
PdbxContactAuthor.getContinent() |
The continent of the author of the data block to whom
correspondence should be addressed.
|
StrColumn |
EmMap.getContourLevelSource() |
source of the recommended contour level
|
StrColumn |
PdbxExptlCrystalCryoTreatment.getCoolingDetails() |
Details of the cooling treatment applied to this crystal.
|
StrColumn |
PdbxNmrEnsembleRms.getCoordAverageRmsdMethod() |
Describe the method for calculating the coordinate average rmsd.
|
StrColumn |
Citation.getCoordinateLinkage() |
_citation.coordinate_linkage states whether this citation
is concerned with precisely the set of coordinates given in the
data block.
|
StrColumn |
NdbOriginalNdbCoordinates.getCoordSection() |
Placeholder item to hold unparsed coordinate data.
|
StrColumn |
EmCtfCorrection.getCorrectionOperation() |
CTF correction operation
|
StrColumn |
PdbxDepuiStatusFlags.getCorrespondingAuthorStatus() |
A flag to indicate status about corresponding author data.
|
StrColumn |
Citation.getCountry() |
The country/region of publication; relevant for books
and book chapters.
|
StrColumn |
PdbxAuditSupport.getCountry() |
The country/region providing the funding support for the entry.
|
StrColumn |
PdbxContactAuthor.getCountry() |
The country/region of the author of the data block to whom
correspondence should be addressed.
|
StrColumn |
PdbxDepuiEntryDetails.getCountry() |
The country/region location of the institution submitting the deposition.
|
StrColumn |
PdbxReferencePublicationList.getCountry() |
The country/region of publication.
|
StrColumn |
PdbxNmrForceConstants.getCovalentGeomAnglesTermUnits() |
The units for the force constant for the covalent geometry angle
constraints term.
|
StrColumn |
PdbxNmrForceConstants.getCovalentGeomBondTermUnits() |
The units for the force constant for the covalent geometry bond
length constraints term.
|
StrColumn |
PdbxNmrForceConstants.getCovalentGeomImpropersTermUnits() |
The units for the force constant for the covalent geometry
impropers constraints term.
|
StrColumn |
Audit.getCreationDate() |
A date that the data block was created.
|
StrColumn |
Audit.getCreationMethod() |
A description of how data were entered into the data block.
|
StrColumn |
StructConfType.getCriteria() |
The criteria used to assign this conformation type.
|
StrColumn |
StructConnType.getCriteria() |
The criteria used to define the interaction.
|
StrColumn |
RefineLsRestr.getCriterion() |
A criterion used to define a parameter value that deviates
significantly from its ideal value in the model obtained by
restrained least-squares refinement.
|
StrColumn |
IhmCrossLinkPseudoSite.getCrossLinkPartner() |
The identity of the cross link partner corresponding to the pseudo site.
|
StrColumn |
EmImaging.getCryogen() |
Cryogen type used to maintain the specimen stage temperature during imaging
in the microscope.
|
StrColumn |
EmVitrification.getCryogenName() |
This is the name of the cryogen.
|
StrColumn |
EmTomographySpecimen.getCryoProtectant() |
The type of cryo-protectant used during specimen preparation.
|
StrColumn |
PdbxDataProcessingDetector.getCrystalDataId() |
Identifier for crystal on which data was collected.
|
StrColumn |
Diffrn.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
ExptlCrystalFace.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
ExptlCrystalGrow.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
ExptlCrystalGrowComp.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
PdbxCrystalAlignment.getCrystalId() |
The identifer of the crystal.
|
StrColumn |
PdbxExptlCrystalCryoTreatment.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
PdbxExptlCrystalGrowComp.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
PdbxExptlCrystalGrowSol.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
PdbxReflnsTwin.getCrystalId() |
The crystal identifier.
|
StrColumn |
Refln.getCrystalId() |
This data item is a pointer to _exptl_crystal.id in the
EXPTL_CRYSTAL category.
|
StrColumn |
Diffrn.getCrystalSupport() |
The physical device used to support the crystal during data
collection.
|
StrColumn |
SpaceGroup.getCrystalSystem() |
The name of the system of geometric crystal classes of space
groups (crystal system) to which the space group belongs.
|
StrColumn |
Diffrn.getCrystalTreatment() |
Remarks about how the crystal was treated prior to intensity
measurement.
|
StrColumn |
Database.getCSDHistory() |
A history of changes made by the Cambridge Crystallographic Data
Centre and incorporated into the Cambridge Structural Database
(CSD).
|
StrColumn |
PdbxEntitySrcGenExpress.getCTerminalSeqTag() |
Any C-terminal sequence tag as a string of one letter amino acid codes
|
StrColumn |
Em3dReconstruction.getCtfCorrectionMethod() |
The CTF-correction method.
|
StrColumn |
PdbxEntitySrcGenExpress.getCultureAdditives() |
Any additives to the base media in which the expression host was grown.
|
StrColumn |
PdbxEntitySrcGenExpress.getCultureBaseMedia() |
The name of the base media in which the expression host was grown.
|
StrColumn |
EmAdmin.getCurrentStatus() |
This data item indicates the current status of the EMDB entry.
|
StrColumn |
PdbxAudit.getCurrentVersion() |
The value of _pdbx_audit.entry_id identifies the data block.
|
StrColumn |
PdbxDatabaseProc.getCycleId() |
This is a number of the processing cycle.
|
StrColumn |
PdbxPostProcessStatus.getCycleId() |
Identifier for the current cycle of post-processing.
|
StrColumn |
RefineHist.getCycleId() |
The value of _refine_hist.cycle_id must uniquely identify a
record in the REFINE_HIST list.
|
StrColumn |
PdbxNmrComputing.getDataAnalysis() |
Enter the name of the software used for data analysis.
|
StrColumn |
PdbxSolnScatter.getDataAnalysisSoftwareList() |
A list of the software used in the data analysis
|
StrColumn |
PdbxNmrComputing.getDataAnalysisVersion() |
Enter the version of the software used for data analysis.
|
StrColumn |
PdbxDbref.getDatabaseAccession() |
Database accession.
|
StrColumn |
PdbxDbref.getDatabaseBeginInsCode() |
Insertion code.
|
StrColumn |
PdbxDbref.getDatabaseBeginResNumber() |
First residue number.
|
StrColumn |
Database2.getDatabaseCode() |
The code assigned by the database identified in
_database_2.database_id.
|
StrColumn |
PdbxDbref.getDatabaseEndInsCode() |
Insertion code.
|
StrColumn |
PdbxDbref.getDatabaseEndResNumber() |
Last residue number.
|
StrColumn |
IhmDatasetList.getDatabaseHosted() |
A flag that indicates whether the dataset is archived in
an IHM related database or elsewhere.
|
StrColumn |
Database2.getDatabaseId() |
An abbreviation that identifies the database.
|
StrColumn |
PdbxDbref.getDatabaseIdCode() |
Database id code.
|
StrColumn |
Citation.getDatabaseIdCSD() |
Identifier ('refcode') of the database record in the Cambridge
Structural Database that contains details of the cited structure.
|
StrColumn |
PdbxDbref.getDatabaseName() |
Database name.
|
StrColumn |
Computing.getDataCollection() |
Software used for data collection.
|
StrColumn |
PdbxAuditRevisionCategory.getDataContentType() |
The type of file that the pdbx_audit_revision_history record refers to.
|
StrColumn |
PdbxAuditRevisionDetails.getDataContentType() |
The type of file that the pdbx_audit_revision_history record refers to.
|
StrColumn |
PdbxAuditRevisionGroup.getDataContentType() |
The type of file that the pdbx_audit_revision_history record refers to.
|
StrColumn |
PdbxAuditRevisionHistory.getDataContentType() |
The type of file that the pdbx_audit_revision_history record refers to.
|
StrColumn |
PdbxAuditRevisionItem.getDataContentType() |
The type of file that the pdbx_audit_revision_history record refers to.
|
StrColumn |
PdbxSupportingExpDataSet.getDataContentType() |
The type of the experimenatal data set.
|
StrColumn |
PdbxNmrUpload.getDataFileCategory() |
This item defines the kind of data in the file uploaded for deposition.
|
StrColumn |
PdbxNmrAssignedChemShiftList.getDataFileName() |
The name of the file submitted with a deposition that contains the quantitative
chemical shift data.
|
StrColumn |
PdbxNmrSpectralPeakList.getDataFileName() |
The name of the file submitted with a deposition that contains the quantitative
data for a spectral peak list.
|
StrColumn |
PdbxNmrUpload.getDataFileName() |
The directory path and file name for the data file that is to be uploaded.
|
StrColumn |
PdbxNmrUpload.getDataFileSyntax() |
The syntax or format of the file that is uploaded.
|
StrColumn |
Computing.getDataReduction() |
Software used for data reduction.
|
StrColumn |
Reflns.getDataReductionDetails() |
A description of special aspects of the data-reduction
procedures.
|
StrColumn |
Reflns.getDataReductionMethod() |
The method used for data reduction.
|
StrColumn |
PdbxSolnScatter.getDataReductionSoftwareList() |
A list of the software used in the data reduction
|
StrColumn |
PdbxRelatedExpDataSet.getDataReference() |
A DOI reference to the related data set.
|
StrColumn |
PdbxRelatedExpDataSet.getDataSetType() |
The type of the experimenatal data set.
|
StrColumn |
EmMap.getDataType() |
The map data_type describes the data structure of the map voxels.
|
StrColumn |
IhmDatasetList.getDataType() |
The type of data held in the dataset.
|
StrColumn |
Journal.getDataValidationNumber() |
Journal data items are defined by the journal staff.
|
StrColumn |
DatabasePDBRev.getDate() |
Date the PDB revision took place.
|
StrColumn |
EmImaging.getDate() |
Date (YYYY-MM-DD) of imaging experiment or the date at which
a series of experiments began.
|
StrColumn |
EmObsolete.getDate() |
Dated when the entry made obsolete the other entry
|
StrColumn |
EmSupersede.getDate() |
Dated when the entry made supersede the other entry
|
StrColumn |
PdbxChemCompAudit.getDate() |
The date associated with this audit record.
|
StrColumn |
PdbxChemCompModelAudit.getDate() |
The date associated with this audit record.
|
StrColumn |
PdbxConnect.getDate() |
Date added.
|
StrColumn |
PdbxConstruct.getDate() |
The date that the sequence was determined.
|
StrColumn |
PdbxDatabaseMessage.getDate() |
This is the date when a message was sent or received.
|
StrColumn |
PdbxDatabasePDBObsSpr.getDate() |
The date of replacement.
|
StrColumn |
PdbxDataProcessingDetector.getDate() |
Data collection date.
|
StrColumn |
PdbxEntitySrcGenCharacter.getDate() |
The date of characterisation step.
|
StrColumn |
PdbxEntitySrcGenChrom.getDate() |
The date of production step.
|
StrColumn |
PdbxEntitySrcGenClone.getDate() |
The date of this production step.
|
StrColumn |
PdbxEntitySrcGenExpress.getDate() |
The date of production step.
|
StrColumn |
PdbxEntitySrcGenFract.getDate() |
The date of this production step.
|
StrColumn |
PdbxEntitySrcGenLysis.getDate() |
The date of this production step.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getDate() |
The date of this production step.
|
StrColumn |
PdbxEntitySrcGenProdOther.getDate() |
The date of this process step.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getDate() |
The date of this production step.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getDate() |
The date of production step.
|
StrColumn |
PdbxEntitySrcGenPure.getDate() |
The date of production step.
|
StrColumn |
PdbxEntitySrcGenRefold.getDate() |
The date of this production step.
|
StrColumn |
PdbxFamilyPrdAudit.getDate() |
The date associated with this audit record.
|
StrColumn |
PdbxPrdAudit.getDate() |
The date associated with this audit record.
|
StrColumn |
Software.getDate() |
The date the software was released.
|
StrColumn |
Journal.getDateAccepted() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxDatabaseStatus.getDateAuthorApproval() |
The date the author's approval is received.
|
StrColumn |
PdbxDatabaseStatus.getDateAuthorReleaseRequest() |
The date on which the author requests entry release.
|
StrColumn |
PdbxDatabaseStatusHistory.getDateBegin() |
This is the date of the start of the current processing status state.
|
StrColumn |
PdbxPostProcessStatus.getDateBegin() |
The starting date for the current post-processing cycle.
|
StrColumn |
PdbxDatabaseProc.getDateBeginCycle() |
This is the date of the start of the processing cycle.
|
StrColumn |
PdbxDatabaseStatus.getDateBeginDeposition() |
The starting date for the deposition session.
|
StrColumn |
PdbxDatabaseStatus.getDateBeginProcessing() |
The starting date for data processing.
|
StrColumn |
PdbxDatabaseStatus.getDateBeginReleasePreparation() |
The date on which release processing began.
|
StrColumn |
PdbxDatabaseStatus.getDateChemicalShifts() |
The date the chemical shift data are received.
|
StrColumn |
PdbxDatabaseStatus.getDateCoordinates() |
The date the coordinates are received.
|
StrColumn |
PdbxDatabaseStatus.getDateDepositionForm() |
The date the deposition form is received.
|
StrColumn |
PdbxDatabaseStatusHistory.getDateEnd() |
This is the date of the end of the current processing status state.
|
StrColumn |
PdbxPostProcessStatus.getDateEnd() |
The completion date for the current post-processing cycle.
|
StrColumn |
PdbxDatabaseProc.getDateEndCycle() |
This is the date of the end of the processing cycle.
|
StrColumn |
PdbxDatabaseStatus.getDateEndProcessing() |
The completion date for data processing.
|
StrColumn |
Journal.getDateFromCoeditor() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxDatabaseStatus.getDateHoldChemicalShifts() |
At an author's request, the chemical shift data may be held after
processing for some period of time.
|
StrColumn |
PdbxDatabaseStatus.getDateHoldCoordinates() |
At an author's request, a coordinate entry may be held after
processing for some period of time.
|
StrColumn |
PdbxDatabaseStatus.getDateHoldNmrConstraints() |
At an author's request, the NMR constraint data may be held after
processing for some period of time.
|
StrColumn |
PdbxDatabaseStatus.getDateHoldNmrData() |
At an author's request, the unified NMR data may be held after
processing for some period of time.
|
StrColumn |
PdbxDatabaseStatus.getDateHoldStructFact() |
At an author's request, the structure factors may be held after
processing for some period of time.
|
StrColumn |
PdbxDatabaseStatus.getDateManuscript() |
The date the manuscript is received.
|
StrColumn |
PdbxDatabaseStatus.getDateNmrConstraints() |
The date the structure factors are received.
|
StrColumn |
PdbxDatabaseStatus.getDateNmrData() |
The date the unified NMR data are received.
|
StrColumn |
PdbxDatabaseStatus.getDateOfCsRelease() |
The date of PDB release.
|
StrColumn |
PdbxDatabaseStatus.getDateOfMrRelease() |
The date of PDB/RCSB release.
|
StrColumn |
PdbxDatabaseStatus.getDateOfNDBRelease() |
The date of NDB/RCSB release.
|
StrColumn |
PdbxDatabaseStatus.getDateOfNmrDataRelease() |
The date of PDB release.
|
StrColumn |
PdbxDatabaseStatus.getDateOfPDBRelease() |
PDB release date.
|
StrColumn |
PdbxDatabaseStatus.getDateOfSfRelease() |
The date of PDB/RCSB release.
|
StrColumn |
DatabasePDBRev.getDateOriginal() |
Date the entry first entered the PDB database in the form
yyyy-mm-dd.
|
StrColumn |
Journal.getDatePrintersFinal() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDatePrintersFirst() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDateProofsIn() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDateProofsOut() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDateRecdCopyright() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDateRecdElectronic() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getDateRecdHardCopy() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxDatabaseStatus.getDateReleasedToPDB() |
The date on which the entry is sent to PDB.
|
StrColumn |
PdbxDatabaseStatus.getDateRevised() |
The date of a revision.
|
StrColumn |
PdbxDatabaseStatus.getDateStructFact() |
The date the structure factors are received.
|
StrColumn |
PdbxDatabaseStatus.getDateSubmitted() |
The date of complete deposition.
|
StrColumn |
Journal.getDateToCoeditor() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getDbAccession() |
The database accession code for the related structure reference.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getDbAccession() |
Accession code of the reference database.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getDbAccession() |
Accession code of the reference database.
|
StrColumn |
IhmStartingModelSeqDif.getDbAsymId() |
The asym/strand identifier for the entity molecule of the database starting model.
|
StrColumn |
PdbxChemCompModelReference.getDbCode() |
The component feature value.
|
StrColumn |
PdbxReferenceEntityPoly.getDbCode() |
The database code for this source information
|
StrColumn |
PdbxReferenceEntitySrcNat.getDbCode() |
The database code for this source information
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getDbCode() |
The database identifier code for the related structure reference.
|
StrColumn |
PdbxStructRefSeqDeletion.getDbCode() |
The code for this entity or biological unit or for a closely
related entity or biological unit in the named database.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getDbCode() |
The code for this entity or biological unit or for a closely
related entity or biological unit in the named database.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getDbCode() |
The code for this entity or biological unit or for a closely
related entity or biological unit in the named database.
|
StrColumn |
PdbxStructRefSeqInsertion.getDbCode() |
The code for this entity or biological unit or for a closely
related entity or biological unit in the named database.
|
StrColumn |
StructRef.getDbCode() |
The code for this entity or biological unit or for a closely
related entity or biological unit in the named database.
|
StrColumn |
IhmStartingModelSeqDif.getDbCompId() |
The correspinding component identifier for the residue in the database starting model.
|
StrColumn |
IhmStartingModelSeqDif.getDbEntityId() |
The molecular entity of the database starting model.
|
StrColumn |
PdbxDatabaseRelated.getDbId() |
The identifying code in the related database.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getDbMonId() |
The monomer type found at this position in the referenced
database entry.
|
StrColumn |
StructRefSeqDif.getDbMonId() |
The monomer type found at this position in the referenced
database entry.
|
StrColumn |
EmDbReference.getDbName() |
The name of the database containing the related entry.
|
StrColumn |
IhmDatasetRelatedDbReference.getDbName() |
The name of the database containing the dataset entry.
|
StrColumn |
PdbxChemCompModelReference.getDbName() |
The component model feature type.
|
StrColumn |
PdbxDatabaseRelated.getDbName() |
The name of the database containing the related entry.
|
StrColumn |
PdbxReferenceEntityPoly.getDbName() |
The database name for this source information
|
StrColumn |
PdbxReferenceEntitySrcNat.getDbName() |
The database name for this source information
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getDbName() |
The database name for the related structure reference.
|
StrColumn |
PdbxStructRefSeqDeletion.getDbName() |
The name of the database containing reference information about
this entity or biological unit.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getDbName() |
The name of the database containing reference information about
this entity or biological unit.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getDbName() |
The name of the database containing reference information about
this entity or biological unit.
|
StrColumn |
PdbxStructRefSeqInsertion.getDbName() |
The name of the database containing reference information about
this entity or biological unit.
|
StrColumn |
StructRef.getDbName() |
The name of the database containing reference information about
this entity or biological unit.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getDbSeqOneLetterCode() |
Database chemical sequence expressed as string of one-letter
residue codes.
|
StrColumn |
PdbxDccDensity.getDCCVersion() |
The version of the DCC program.
|
StrColumn |
PdbxEntitySrcGenRefold.getDenatureBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
ExptlCrystal.getDensityMethod() |
The method used to measure _exptl_crystal.density_meas.
|
StrColumn |
PdbxDepuiEntityFeatures.getDepDatasetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
PdbxDepuiEntityStatusFlags.getDepDatasetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
PdbxDepuiEntryDetails.getDepDatasetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
PdbxDepuiStatusFlags.getDepDatasetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
PdbxDepuiValidationStatusFlags.getDepDatasetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
Software.getDependencies() |
Any prerequisite software required to run _software.name.
|
StrColumn |
PdbxDepositionMessageFileReference.getDepositionDataSetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
PdbxDepositionMessageInfo.getDepositionDataSetId() |
The internal identifier assigned to each deposition.
|
StrColumn |
EmAdmin.getDepositionDate() |
date of the entry deposition
|
StrColumn |
EmAdmin.getDepositionSite() |
entry deposition site
|
StrColumn |
EmDepui.getDepositorHoldInstructions() |
Choose the manner in which you would like the map and associated files (half
maps, additional maps, masks, FSC curves, structure factors, layer lines, and
images) to be released.
|
StrColumn |
PdbxDatabaseStatus.getDepositSite() |
The site where the file was deposited.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeChemicalShifts() |
The deposited chemical shift data for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeCoordinates() |
The deposited coordinates for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeNmrConstraints() |
The deposited NMR constrait data for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeNmrData() |
The deposited unified NMR data for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeSequence() |
The sequence information for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDatabaseStatus.getDepReleaseCodeStructFact() |
The deposited structure factors for this deposition will be released according
the value of this item.
|
StrColumn |
PdbxDepositGroupIndex.getDepSetId() |
An internal identifier for a deposited data set.
|
StrColumn |
PhasingMIRDerRefln.getDerId() |
This data item is a pointer to _phasing_MIR_der.id in the
PHASING_MIR_DER category.
|
StrColumn |
PhasingMIRDerShell.getDerId() |
This data item is a pointer to _phasing_MIR_der.id in the
PHASING_MIR_DER category.
|
StrColumn |
PhasingMIRDerSite.getDerId() |
This data item is a pointer to _phasing_MIR_der.id in the
PHASING_MIR_DER category.
|
StrColumn |
PhasingMIRDer.getDerSetId() |
The data set that was treated as the derivative in this
experiment.
|
StrColumn |
AtomType.getDescription() |
A description of the atom(s) designated by this atom type.
|
StrColumn |
DiffrnReflnsClass.getDescription() |
Description of each reflection class.
|
StrColumn |
ExptlCrystal.getDescription() |
A description of the quality and habit of the crystal.
|
StrColumn |
IhmModelingProtocolDetails.getDescription() |
Textual description of the protocol step.
|
StrColumn |
IhmModelRepresentationDetails.getDescription() |
Additional description regarding the model representation.
|
StrColumn |
IhmPolyProbePosition.getDescription() |
An author provided description for the residue position in the polymer.
|
StrColumn |
IhmPseudoSite.getDescription() |
Textual description of the pseudo site.
|
StrColumn |
IhmStartingModelDetails.getDescription() |
Additional description regarding the starting model.
|
StrColumn |
IhmStructAssembly.getDescription() |
Description of the structural assembly.
|
StrColumn |
IhmStructAssemblyClass.getDescription() |
Additional description regarding the class.
|
StrColumn |
PdbxAuditRevisionDetails.getDescription() |
Additional details describing the revision.
|
StrColumn |
PdbxColumninfo.getDescription() |
SQL column description.
|
StrColumn |
PdbxLinkedEntity.getDescription() |
Description of this molecule.
|
StrColumn |
PdbxReferenceMolecule.getDescription() |
Description of this molecule.
|
StrColumn |
PdbxSerialCrystallographySampleDelivery.getDescription() |
The description of the mechanism by which the specimen in placed in the path
of the source.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getDescription() |
For a fixed target sample, a description of sample preparation
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getDescription() |
For continuous sample flow experiments, a description of the injector used
to move the sample into the beam.
|
StrColumn |
PdbxStructGroupList.getDescription() |
The description of the group.
|
StrColumn |
PdbxTableinfo.getDescription() |
SQL table description.
|
StrColumn |
PdbxViewCategoryGroup.getDescription() |
A description for this collection of categories.
|
StrColumn |
ReflnsClass.getDescription() |
Description of each reflection class.
|
StrColumn |
Software.getDescription() |
Description of the software.
|
StrColumn |
PdbxChemCompDepositorInfo.getDescriptor() |
This data item contains the descriptor value for this
component.
|
StrColumn |
PdbxChemCompDescriptor.getDescriptor() |
This data item contains the descriptor value for this
component.
|
StrColumn |
PdbxChemCompModelDescriptor.getDescriptor() |
This data item contains the descriptor value for this
component.
|
StrColumn |
PdbxEntityBranchDescriptor.getDescriptor() |
This data item contains the descriptor value for this
entity.
|
StrColumn |
PdbxChemCompDepositorInfo.getDescriptorType() |
This data item contains the descriptor type.
|
StrColumn |
AtomSite.getDetails() |
A description of special aspects of this site.
|
StrColumn |
AtomSitesAlt.getDetails() |
A description of special aspects of the modelling of atoms in
alternative conformations.
|
StrColumn |
AtomSitesAltEns.getDetails() |
A description of special aspects of the ensemble structure
generated from atoms with various alternative IDs.
|
StrColumn |
Cell.getDetails() |
A description of special aspects of the cell choice, noting
possible alternative settings.
|
StrColumn |
ChemCompLink.getDetails() |
A description of special aspects of a link between
chemical components in the structure.
|
StrColumn |
ChemLink.getDetails() |
A description of special aspects of a link between
chemical components in the structure.
|
StrColumn |
Citation.getDetails() |
A description of special aspects of the relationship
of the contents of the data block to the literature item cited.
|
StrColumn |
DatabasePDBRevRecord.getDetails() |
A description of special aspects of the revision of records in
this PDB entry.
|
StrColumn |
DatabasePDBTvect.getDetails() |
A description of special aspects of this TVECT.
|
StrColumn |
Diffrn.getDetails() |
Special details of the diffraction measurement process.
|
StrColumn |
DiffrnDetector.getDetails() |
A description of special aspects of the radiation detector.
|
StrColumn |
DiffrnMeasurement.getDetails() |
A description of special aspects of the intensity measurement.
|
StrColumn |
DiffrnSource.getDetails() |
A description of special aspects of the radiation source used.
|
StrColumn |
Em2dProjectionSelection.getDetails() |
Any additional details used for selecting observed assemblies.
|
StrColumn |
Em3dFitting.getDetails() |
Any additional details regarding fitting of atomic coordinates into
the 3DEM volume, including data and considerations from other
methods used in computation of the model.
|
StrColumn |
Em3dFittingList.getDetails() |
Details about the model used in fitting.
|
StrColumn |
Em3dReconstruction.getDetails() |
Any additional details used in the 3d reconstruction.
|
StrColumn |
EmAdmin.getDetails() |
EMDB administration details
|
StrColumn |
EmAssembly.getDetails() |
Any additional details describing the imaged sample.
|
StrColumn |
EmBuffer.getDetails() |
Additional details about the buffer.
|
StrColumn |
EmCrystalFormation.getDetails() |
Description of growth of a 2D, 3D, or helical crystal array.
|
StrColumn |
EmCtfCorrection.getDetails() |
Any additional details about CTF correction
|
StrColumn |
EmDbReference.getDetails() |
A description of the related entry.
|
StrColumn |
EmDetector.getDetails() |
Any additional information about the detection system.
|
StrColumn |
EmDiffractionStats.getDetails() |
Any addition details about the structure factor measurements
|
StrColumn |
EmEmbedding.getDetails() |
Staining procedure used in the specimen preparation.
|
StrColumn |
EmEntityAssembly.getDetails() |
Additional details about the component.
|
StrColumn |
EmEulerAngleAssignment.getDetails() |
Any additional details about euler angle assignment
|
StrColumn |
EmFigureDepositorInfo.getDetails() |
Details about the image file.
|
StrColumn |
EmFinalClassification.getDetails() |
Additional details about the final 2D classification
|
StrColumn |
EmFocusedIonBeam.getDetails() |
Additional details about FIB milling
|
StrColumn |
EmFscCurve.getDetails() |
Details about the FSC file.
|
StrColumn |
EmHelicalEntity.getDetails() |
Any other details regarding the helical assembly
|
StrColumn |
EmHighPressureFreezing.getDetails() |
Additional details about high pressure freezing.
|
StrColumn |
EmImageProcessing.getDetails() |
Method details.
|
StrColumn |
EmImageRecording.getDetails() |
Any additional details about image recording.
|
StrColumn |
EmImageScans.getDetails() |
Any additional details about image recording.
|
StrColumn |
EmImaging.getDetails() |
Any additional imaging details.
|
StrColumn |
EmInterpretFigure.getDetails() |
Details about the image file.
|
StrColumn |
EmLayerLines.getDetails() |
Details about the layer line file.
|
StrColumn |
EmLayerLinesDepositorInfo.getDetails() |
Details about the layer line file.
|
StrColumn |
EmObsolete.getDetails() |
Details
|
StrColumn |
EmParticleSelection.getDetails() |
Any additional details used for selecting particles
|
StrColumn |
EmSamplePreparation.getDetails() |
Details of the specimen preparation
|
StrColumn |
EmSampleSupport.getDetails() |
Any additional details concerning the sample support.
|
StrColumn |
EmShadowing.getDetails() |
Additional details about specimen shadowing
|
StrColumn |
EmSoftware.getDetails() |
Details about the software used.
|
StrColumn |
EmSpecimen.getDetails() |
A description of any additional details of the specimen preparation.
|
StrColumn |
EmStaining.getDetails() |
Staining procedure used in the specimen preparation.
|
StrColumn |
EmStartModel.getDetails() |
Any additional details about generating the startup model
|
StrColumn |
EmStructureFactors.getDetails() |
Details about the structure factor file.
|
StrColumn |
EmStructureFactorsDepositorInfo.getDetails() |
Details about the structure factor file.
|
StrColumn |
EmSupersede.getDetails() |
Details
|
StrColumn |
EmTomographySpecimen.getDetails() |
Any additional details about specimen preparation.
|
StrColumn |
EmUltramicrotomy.getDetails() |
Additional details about the ultramicrotomy sample preparation
|
StrColumn |
EmVirusEntity.getDetails() |
Additional details about this virus entity
|
StrColumn |
EmVitrification.getDetails() |
Any additional details relating to vitrification.
|
StrColumn |
EmVolumeSelection.getDetails() |
Any additional details used for selecting volumes.
|
StrColumn |
Entity.getDetails() |
A description of special aspects of the entity.
|
StrColumn |
EntityLink.getDetails() |
A description of special aspects of a link between
chemical components in the structure.
|
StrColumn |
EntitySrcNat.getDetails() |
A description of special aspects of the organism from which the
entity was isolated.
|
StrColumn |
EntryLink.getDetails() |
A description of the relationship between the data blocks
identified by _entry_link.id and _entry_link.entry_id.
|
StrColumn |
Exptl.getDetails() |
Any special information about the experimental work prior to the
intensity measurement.
|
StrColumn |
ExptlCrystalGrow.getDetails() |
A description of special aspects of the crystal growth.
|
StrColumn |
ExptlCrystalGrowComp.getDetails() |
A description of any special aspects of the solution component.
|
StrColumn |
Geom.getDetails() |
A description of geometry not covered by the
existing data names in the GEOM categories, such as
least-squares planes.
|
StrColumn |
Ihm2demClassAverageRestraint.getDetails() |
Details of how the 2DEM restraint is applied in the modeling algorithm.
|
StrColumn |
Ihm3demRestraint.getDetails() |
Additional details regarding the model to map fitting.
|
StrColumn |
IhmChemicalComponentDescriptor.getDetails() |
Additional details regarding the chemical component.
|
StrColumn |
IhmCrossLinkList.getDetails() |
Additional details regarding the cross link or the cross linking agent.
|
StrColumn |
IhmCrossLinkResult.getDetails() |
This records holds any associated details of the results of the particular
crosslink restraint in the integrative modeling task.
|
StrColumn |
IhmDatasetGroup.getDetails() |
Additional details regarding the dataset group.
|
StrColumn |
IhmDatasetList.getDetails() |
Details regarding the dataset, especially those types not listed in
_ihm_dataset_list.data_type.
|
StrColumn |
IhmDatasetRelatedDbReference.getDetails() |
Details regarding the dataset entry.
|
StrColumn |
IhmEnsembleInfo.getDetails() |
Additional details regarding the ensemble.
|
StrColumn |
IhmEprRestraint.getDetails() |
Additional details regarding the EPR restraint used.
|
StrColumn |
IhmExternalFiles.getDetails() |
Additional textual details regarding the external file.
|
StrColumn |
IhmExternalReferenceInfo.getDetails() |
Additional details regarding the external reference.
|
StrColumn |
IhmFeatureList.getDetails() |
Additional details regarding the feature.
|
StrColumn |
IhmGeometricObjectDistanceRestraint.getDetails() |
Additional details about the geometric object distance restraints,
especially if _ihm_geometric_object_distance_restraint.restraint_type or
_ihm_geometric_object_distance_restraint.object_characteristic is "other".
|
StrColumn |
IhmHdxRestraint.getDetails() |
Additional details regarding the HDX restraint.
|
StrColumn |
IhmInterfaceResidueFeature.getDetails() |
Additional details regarding the interface residue.
|
StrColumn |
IhmLigandProbe.getDetails() |
Additional details regarding the ligand probe.
|
StrColumn |
IhmModelGroup.getDetails() |
Additional details about the collection of models.
|
StrColumn |
IhmModelingPostProcess.getDetails() |
Additional details regarding post processing.
|
StrColumn |
IhmModelingProtocol.getDetails() |
Additional details about the modeling protocol.
|
StrColumn |
IhmModelRepresentation.getDetails() |
Additional details about the model representation.
|
StrColumn |
IhmMultiStateModeling.getDetails() |
Additional textual details of the multi-state modeling, if required.
|
StrColumn |
IhmPolyProbeConjugate.getDetails() |
Additional details regarding the conjugate.
|
StrColumn |
IhmResiduesNotModeled.getDetails() |
Additional details regarding the missing segments.
|
StrColumn |
IhmSasRestraint.getDetails() |
Additional details regarding the SAS restraint used.
|
StrColumn |
IhmStartingComparativeModels.getDetails() |
Additional details regarding the starting comparative models.
|
StrColumn |
IhmStartingModelSeqDif.getDetails() |
A description of special aspects of the point differences
between the sequence of the entity or biological unit described
in the data block and that in the starting model referenced
from a database.
|
StrColumn |
PdbxAuditRevisionDetails.getDetails() |
Further details describing the revision.
|
StrColumn |
PdbxAuditSupport.getDetails() |
Additional details regarding the funding of this entry
|
StrColumn |
PdbxBuffer.getDetails() |
Any additional details to do with buffer.
|
StrColumn |
PdbxBufferComponents.getDetails() |
Any additional details to do with buffer composition.
|
StrColumn |
PdbxChemCompAudit.getDetails() |
Additional details decribing this change.
|
StrColumn |
PdbxChemCompDepositorInfo.getDetails() |
This data item contains additional details about this
component.
|
StrColumn |
PdbxChemCompModelAudit.getDetails() |
Additional details decribing this change.
|
StrColumn |
PdbxChemCompRelated.getDetails() |
Describes the type of relationship
|
StrColumn |
PdbxConstruct.getDetails() |
Additional details about the construct that cannot be
represented in the category _pdbx_construct_feature.
|
StrColumn |
PdbxConstructFeature.getDetails() |
Details that describe the feature
|
StrColumn |
PdbxDatabasePDBObsSpr.getDetails() |
Details related to the replaced or replacing entry.
|
StrColumn |
PdbxDatabaseProc.getDetails() |
Special details about the current processing cycle.
|
StrColumn |
PdbxDatabaseRelated.getDetails() |
A description of the related entry.
|
StrColumn |
PdbxDatabaseStatusHistory.getDetails() |
Special details about the current process status state.
|
StrColumn |
PdbxDccDensityCorr.getDetails() |
Any additional details of the calculations.
|
StrColumn |
PdbxDccMapman.getDetails() |
The details of the use of mapman by the DCC program.
|
StrColumn |
PdbxDomain.getDetails() |
A description of special aspects of the structural elements that
comprise a domain.
|
StrColumn |
PdbxEntityBranchLink.getDetails() |
A description of special aspects of this linkage.
|
StrColumn |
PdbxEntityInstanceFeature.getDetails() |
Special structural details about this entity instance.
|
StrColumn |
PdbxEntityPolyCompLinkList.getDetails() |
A description of special aspects of this linkage.
|
StrColumn |
PdbxEntitySrcGenCharacter.getDetails() |
Any details associated with this method of protein characterisation.
|
StrColumn |
PdbxEntitySrcGenCloneLigation.getDetails() |
Any details to be associated with this ligation step, e.g.
|
StrColumn |
PdbxEntitySrcGenCloneRecombination.getDetails() |
Any details to be associated with this recombination step, e.g.
|
StrColumn |
PdbxEntitySrcGenFract.getDetails() |
String value containing details of the fractionation.
|
StrColumn |
PdbxEntitySrcGenLysis.getDetails() |
String value containing details of the lysis protocol.
|
StrColumn |
PdbxEntitySrcGenProdOther.getDetails() |
Additional details of this process step.
|
StrColumn |
PdbxEntitySrcGenProdOtherParameter.getDetails() |
Additional details about the parameter
|
StrColumn |
PdbxEntitySrcGenProteolysis.getDetails() |
Details of this tag removal step.
|
StrColumn |
PdbxEntitySrcGenRefold.getDetails() |
String value containing details of the refolding.
|
StrColumn |
PdbxEntitySrcSyn.getDetails() |
A description of special aspects of the source for the
synthetic entity.
|
StrColumn |
PdbxFamilyPrdAudit.getDetails() |
Additional details decribing this change.
|
StrColumn |
PdbxLinkedEntityLinkList.getDetails() |
A description of special aspects of a linkage between
these entities in this molecule.
|
StrColumn |
PdbxLinkedEntityList.getDetails() |
Additional details about this entity within this molecule.
|
StrColumn |
PdbxMoleculeFeatures.getDetails() |
Additional details describing the molecule.
|
StrColumn |
PdbxMoleculeFeaturesDepositorInfo.getDetails() |
Additional details describing the molecule.
|
StrColumn |
PdbxNmrAssignedChemShiftList.getDetails() |
Text describing the reported assigned chemical shifts.
|
StrColumn |
PdbxNmrChemShiftReference.getDetails() |
Text providing additional information regarding the reported chemical shift
referencing values or methods.
|
StrColumn |
PdbxNmrExptlSampleConditions.getDetails() |
General details describing conditions of both the sample and the environment
during measurements.
|
StrColumn |
PdbxNmrRefine.getDetails() |
Additional details about the NMR refinement.
|
StrColumn |
PdbxNmrSampleDetails.getDetails() |
Brief description of the sample providing additional information not captured by other items in the category.
|
StrColumn |
PdbxNmrSoftware.getDetails() |
Text description of the software.
|
StrColumn |
PdbxNmrSpectralPeakList.getDetails() |
Text describing the reported list of spectral peaks.
|
StrColumn |
PdbxNmrSpectrometer.getDetails() |
A text description of the NMR spectrometer.
|
StrColumn |
PdbxPostProcessStatus.getDetails() |
A description of the current post-processing cycle.
|
StrColumn |
PdbxPrdAudit.getDetails() |
Additional details decribing this change.
|
StrColumn |
PdbxReferenceEntityLink.getDetails() |
A description of special aspects of a linkage between
chemical components in the structure.
|
StrColumn |
PdbxReferenceEntityList.getDetails() |
Additional details about this entity.
|
StrColumn |
PdbxReferenceEntityNonpoly.getDetails() |
Additional details about this entity.
|
StrColumn |
PdbxReferenceEntityPolyLink.getDetails() |
A description of special aspects of this linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getDetails() |
A description of special aspects of a linkage between
these constituents in this linked entity.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getDetails() |
A description of special aspects of a linkage between
these constituents in this linked entity.
|
StrColumn |
PdbxRefineTls.getDetails() |
A description of the TLS group, such as a domain name or a
chemical group name.
|
StrColumn |
PdbxRelatedExpDataSet.getDetails() |
Additional details describing the content of the related data set and its application to
the current investigation.
|
StrColumn |
PdbxReRefinement.getDetails() |
Additional details about this re-refinement.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getDetails() |
Any details pertinent to the fixed sample target
|
StrColumn |
PdbxSolnScatterModel.getDetails() |
A description of any additional details concerning the experiment.
|
StrColumn |
PdbxStructAssembly.getDetails() |
A description of special aspects of the macromolecular assembly.
|
StrColumn |
PdbxStructAssemblyAuthEvidence.getDetails() |
Provides any additional information regarding the evidence of this assembly
|
StrColumn |
PdbxStructAssemblyAuthEvidenceDepositorInfo.getDetails() |
Provides any additional information regarding the evidence of this assembly
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getDetails() |
A description of special aspects of the macromolecular assembly.
|
StrColumn |
PdbxStructAssemblyProp.getDetails() |
Additional details about this assembly property.
|
StrColumn |
PdbxStructAssemblyPropDepositorInfo.getDetails() |
Additional details about this assembly property.
|
StrColumn |
PdbxStructChemCompDiagnostics.getDetails() |
Special structural details about this chemical component.
|
StrColumn |
PdbxStructChemCompFeature.getDetails() |
Special structural details about this chemical component.
|
StrColumn |
PdbxStructEntityInst.getDetails() |
A description of special aspects of this portion of the contents
of the deposited unit.
|
StrColumn |
PdbxStructInfo.getDetails() |
Additional details about this information item.
|
StrColumn |
PdbxStructLink.getDetails() |
Text description of the linkage.
|
StrColumn |
PdbxStructModResidue.getDetails() |
Details of the modification for this polymer component.
|
StrColumn |
PdbxStructRefSeqDeletion.getDetails() |
A description of any special aspects of the deletion
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getDetails() |
A description of special aspects of the sequence alignment.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getDetails() |
A description of special aspects of the point differences
between the sequence of the entity or biological unit described
in the data block and that in the referenced database entry.
|
StrColumn |
PdbxStructRefSeqFeature.getDetails() |
A description of special aspects of the feature
|
StrColumn |
PdbxStructRefSeqFeatureProp.getDetails() |
A description of special aspects of the property value pair.
|
StrColumn |
PdbxStructRefSeqInsertion.getDetails() |
A description of any special aspects of the insertion
|
StrColumn |
PdbxSupportingExpDataSet.getDetails() |
Additional details describing the content of the supporting data set and its application to
the current investigation.
|
StrColumn |
PdbxValidateChiral.getDetails() |
A description of the outlier angle e.g.
|
StrColumn |
PdbxVersion.getDetails() |
A text description of any special details of the current version.
|
StrColumn |
PhasingAveraging.getDetails() |
A description of special aspects of the averaging process.
|
StrColumn |
PhasingIsomorphous.getDetails() |
A description of special aspects of the isomorphous phasing.
|
StrColumn |
PhasingMAD.getDetails() |
A description of special aspects of the MAD phasing.
|
StrColumn |
PhasingMIR.getDetails() |
A description of special aspects of the isomorphous-replacement
phasing.
|
StrColumn |
PhasingMIRDer.getDetails() |
A description of special aspects of this derivative, its data,
its solution or its use in phasing.
|
StrColumn |
PhasingMIRDerSite.getDetails() |
A description of special aspects of the derivative site.
|
StrColumn |
Refine.getDetails() |
Description of special aspects of the refinement process.
|
StrColumn |
RefineBIso.getDetails() |
A description of special aspects of the isotropic B-factor
(displacement-parameter) refinement for the class of atoms
described in _refine_B_iso.class.
|
StrColumn |
RefineHist.getDetails() |
A description of special aspects of this cycle of the refinement
process.
|
StrColumn |
RefineOccupancy.getDetails() |
A description of special aspects of the occupancy refinement for
a class of atoms described in _refine_occupancy.class.
|
StrColumn |
Reflns.getDetails() |
A description of reflection data not covered by other data
names.
|
StrColumn |
StructAsym.getDetails() |
A description of special aspects of this portion of the contents
of the asymmetric unit.
|
StrColumn |
StructBiol.getDetails() |
A description of special aspects of the biological unit.
|
StrColumn |
StructBiolGen.getDetails() |
A description of special aspects of the symmetry generation of
this portion of the biological structure.
|
StrColumn |
StructBiolView.getDetails() |
A description of special aspects of this view of the biological
structure.
|
StrColumn |
StructConf.getDetails() |
A description of special aspects of the conformation assignment.
|
StrColumn |
StructConn.getDetails() |
A description of special aspects of the connection.
|
StrColumn |
StructNcsDom.getDetails() |
A description of special aspects of the structural elements that
comprise a domain in an ensemble of domains related by
noncrystallographic symmetry.
|
StrColumn |
StructNcsEns.getDetails() |
A description of special aspects of the ensemble.
|
StrColumn |
StructNcsOper.getDetails() |
A description of special aspects of the noncrystallographic
symmetry operator.
|
StrColumn |
StructRef.getDetails() |
A description of special aspects of the relationship between
the entity or biological unit described in the data block and
that in the referenced database entry.
|
StrColumn |
StructRefSeq.getDetails() |
A description of special aspects of the sequence alignment.
|
StrColumn |
StructRefSeqDif.getDetails() |
A description of special aspects of the point differences
between the sequence of the entity or biological unit described
in the data block and that in the referenced database entry.
|
StrColumn |
StructSheet.getDetails() |
A description of special aspects of the beta-sheet.
|
StrColumn |
StructSite.getDetails() |
A description of special aspects of the site.
|
StrColumn |
StructSiteGen.getDetails() |
A description of special aspects of the symmetry generation of
this portion of the structural site.
|
StrColumn |
StructSiteView.getDetails() |
A description of special aspects of this view of the
site.
|
StrColumn |
ValenceParam.getDetails() |
Details of or comments on the bond-valence parameters.
|
StrColumn |
DiffrnDetector.getDetector() |
The general class of the radiation detector.
|
StrColumn |
EmImaging.getDetectorId() |
The value of _em_imaging.detector_id must uniquely identify
the type of detector used in the experiment.
|
StrColumn |
EmImageRecording.getDetectorMode() |
The detector mode used during image recording.
|
StrColumn |
PdbxSolnScatter.getDetectorSpecific() |
The particular radiation detector.
|
StrColumn |
PhasingSet.getDetectorSpecific() |
The particular radiation detector.
|
StrColumn |
PdbxSolnScatter.getDetectorType() |
The general class of the radiation detector.
|
StrColumn |
PhasingSet.getDetectorType() |
The general class of the radiation detector.
|
StrColumn |
DiffrnMeasurement.getDevice() |
The general class of goniometer or device used to support and
orient the specimen.
|
StrColumn |
DiffrnMeasurement.getDeviceDetails() |
A description of special aspects of the device used to measure
the diffraction intensities.
|
StrColumn |
DiffrnMeasurement.getDeviceType() |
The make, model or name of the measurement device
(goniometer) used.
|
StrColumn |
PdbxDepuiUpload.getDiagnosticMessage() |
Text of any diagnostic messages asssociated with the upload processing
of the input data.
|
StrColumn |
AuditConform.getDictLocation() |
A file name or uniform resource locator (URL) for the
dictionary to which the current data block conforms.
|
StrColumn |
AuditConform.getDictName() |
The string identifying the highest-level dictionary defining
data names used in this file.
|
StrColumn |
AuditConform.getDictVersion() |
The version number of the dictionary to which the current
data block conforms.
|
StrColumn |
DiffrnDetector.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnMeasurement.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnOrientMatrix.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnOrientRefln.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnRadiation.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnRefln.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnReflns.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnSource.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnStandardRefln.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
DiffrnStandards.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
PdbxDiffrnReflnsShell.getDiffrnId() |
This data item is a pointer to _diffrn.id in the DIFFRN category.
|
StrColumn |
PdbxReflnsTwin.getDiffrnId() |
The diffraction data set identifier.
|
StrColumn |
PdbxSerialCrystallographyDataReduction.getDiffrnId() |
The data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
PdbxSerialCrystallographyMeasurement.getDiffrnId() |
The data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
PdbxSerialCrystallographySampleDelivery.getDiffrnId() |
The data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getDiffrnId() |
The data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getDiffrnId() |
The data item is a pointer to _diffrn.id in the DIFFRN
category.
|
StrColumn |
AtomSite.getDisorderAssembly() |
A code which identifies a cluster of atoms that show long-range
positional disorder but are locally ordered.
|
StrColumn |
AtomSite.getDisorderGroup() |
A code which identifies a group of positionally disordered atom
sites that are locally simultaneously occupied.
|
StrColumn |
PdbxNmrEnsemble.getDistanceConstraintViolationMethod() |
Describe the method used to calculate the distance constraint violation statistics,
i.e.
|
StrColumn |
PdbxDomainRange.getDomainId() |
This data item is a pointer to _pdbx_domain.id in the
PDBX_DOMAIN category.
|
StrColumn |
PdbxEntityFuncBindMode.getDomainId() |
This data item is a pointer to _pdbx_entity_poly_domain.id in the
PDBX_ENTITY_POLY_DOMAIN category.
|
StrColumn |
PdbxFeatureDomain.getDomainId() |
The value of _pdbx_feature_domain.id references a domain
definition in category PDBX_DOMAIN.
|
StrColumn |
PdbxReflnsTwin.getDomainId() |
An identifier for the twin domain.
|
StrColumn |
PdbxRefineLsRestrNcs.getDomId() |
This data item is a pointer to _struct_ncs_dom.id in the
STRUCT_NCS_DOM category.
|
StrColumn |
RefineLsRestrNcs.getDomId() |
This data item is a pointer to _struct_ncs_dom.id in the
STRUCT_NCS_DOM category.
|
StrColumn |
StructNcsDomLim.getDomId() |
This data item is a pointer to _struct_ncs_dom.id in the
STRUCT_NCS_DOM category.
|
StrColumn |
StructNcsEnsGen.getDomId1() |
The identifier for the domain that will remain unchanged by the
transformation operator.
|
StrColumn |
StructNcsEnsGen.getDomId2() |
The identifier for the domain that will be transformed by
application of the transformation operator.
|
StrColumn |
EmHelicalEntity.getDyad() |
Value should be YES if a the filament has two-fold symmetry perpendicular to the helical axis.
|
StrColumn |
PdbxHelicalSymmetry.getDyadAxis() |
Two-fold symmetry perpendicular to the helical axis.
|
StrColumn |
PdbxHelicalSymmetryDepositorInfo.getDyadAxis() |
Two-fold symmetry perpendicular to the helical axis.
|
StrColumn |
EmEntityAssembly.getEbiCell() |
The cell from which the component was
obtained.
|
StrColumn |
EmEntityAssembly.getEbiCellularLocation() |
The cellular location of the component.
|
StrColumn |
EmEntityAssembly.getEbiEngineered() |
A flag to indicate whether the component is engineered.
|
StrColumn |
EmEntityAssembly.getEbiExpressionSystem() |
The expression system used to produce the component.
|
StrColumn |
EmEntityAssembly.getEbiExpressionSystemPlasmid() |
The plasmid used to produce the component.
|
StrColumn |
EmEntityAssembly.getEbiOrganelle() |
The organelle from which the component was
obtained.
|
StrColumn |
EmEntityAssembly.getEbiOrganismCommon() |
The common name of the species of the natural organism from which
the component was obtained.
|
StrColumn |
EmEntityAssembly.getEbiOrganismScientific() |
The species of the natural organism from which the component
was obtained.
|
StrColumn |
EmEntityAssembly.getEbiStrain() |
The strain of the natural organism from which the component was
obtained, if relevant.
|
StrColumn |
EmEntityAssembly.getEbiTissue() |
The tissue of the natural organism from which the component was
obtained.
|
StrColumn |
IhmOrderedEnsemble.getEdgeDescription() |
Description of the edge.
|
StrColumn |
PdbxChemCompAtomEdit.getEditAtomId() |
The identifier for the edited atom in the generated component.
|
StrColumn |
PdbxChemCompAtomEdit.getEditAtomValue() |
The value for the edited atomic property value in the generated component.
|
StrColumn |
PdbxChemCompBondEdit.getEditBondValue() |
The value for the edited bond property value in the generated component.
|
StrColumn |
PdbxChemCompAtomEdit.getEditOp() |
The operation applied to the named imported component.
|
StrColumn |
PdbxChemCompBondEdit.getEditOp() |
The operation or assignment applied to the named imported component.
|
StrColumn |
EmImaging.getElectronBeamTiltParams() |
electron beam tilt params
|
StrColumn |
EmImaging.getElectronSource() |
The source of electrons.
|
StrColumn |
PublBody.getElement() |
The functional role of the associated text section.
|
StrColumn |
PdbxEntitySrcGenChrom.getElutionBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxEntitySrcGenChrom.getElutionProtocol() |
Details of the elution protocol.
|
StrColumn |
AuditContactAuthor.getEmail() |
The electronic mail address of the author of the data block to
whom correspondence should be addressed, in a form recognizable
to international networks.
|
StrColumn |
PdbxContactAuthor.getEmail() |
The electronic mail address of the author of the data block to
whom correspondence should be addressed, in a form recognisable
to international networks.
|
StrColumn |
PublAuthor.getEmail() |
The e-mail address of a publication author.
|
StrColumn |
EmSpecimen.getEmbeddingApplied() |
'YES' indicates that the specimen has been embedded.
|
StrColumn |
EmStartModel.getEmdbId() |
EMDB id of the map used as the startup model
|
StrColumn |
EmDiffractionShell.getEmDiffractionStatsId() |
Pointer to EM CRYSTALLOGRAPHY STATS
|
StrColumn |
EmCtfCorrection.getEmImageProcessingId() |
Foreign key to the EM_IMAGE_PROCESSING category
|
StrColumn |
EmDepositorInfo.getEmMethodSelection() |
The selected EM experimental method.
|
StrColumn |
EmVirusEntity.getEmpty() |
Flag to indicate if the virus is empty or not.
|
StrColumn |
EmFiducialMarkers.getEmTomographySpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmFocusedIonBeam.getEmTomographySpecimenId() |
Foreign key relationship to the EM TOMOGRAPHY SPECIMEN category
|
StrColumn |
EmHighPressureFreezing.getEmTomographySpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmUltramicrotomy.getEmTomographySpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
PdbxNmrSpectralDim.getEncodingCode() |
Code describing how information from one spectral dimension has been encoded
in another dimension in for example a reduced dimensionality experiment.
|
StrColumn |
PdbxDomainRange.getEndAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxRefineTlsGroup.getEndAuthAsymId() |
A component of the identifier for the residue at which the
TLS fragment range ends.
|
StrColumn |
PdbxSequenceRange.getEndAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndAuthAsymId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getEndAuthAsymId() |
A component of the identifier for the residue at which the
conformation segment ends.
|
StrColumn |
StructNcsDomLim.getEndAuthAsymId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
StructSheetRange.getEndAuthAsymId() |
A component of the identifier for the residue at which the
beta-sheet range ends.
|
StrColumn |
PdbxDomainRange.getEndAuthCompId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxSequenceRange.getEndAuthCompId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndAuthCompId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getEndAuthCompId() |
A component of the identifier for the residue at which the
conformation segment ends.
|
StrColumn |
StructNcsDomLim.getEndAuthCompId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
StructSheetRange.getEndAuthCompId() |
A component of the identifier for the residue at which the
beta-sheet range ends.
|
StrColumn |
PdbxStructRefSeqFeature.getEndAuthMonId() |
Monomer ID at the terminal position in the PDB sequence segment
|
StrColumn |
PdbxDomainRange.getEndAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxRefineTlsGroup.getEndAuthSeqId() |
A component of the identifier for the residue at which the
TLS fragment range ends.
|
StrColumn |
PdbxSequenceRange.getEndAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndAuthSeqId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
PdbxStructRefSeqFeature.getEndAuthSeqId() |
Ending position in the PDB sequence segment
|
StrColumn |
StructNcsDomLim.getEndAuthSeqId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxEntitySrcGenChrom.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenClone.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenExpress.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenFract.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenLysis.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the
PDBX_CONSTRUCT category.
|
StrColumn |
PdbxEntitySrcGenProdOther.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxEntitySrcGenRefold.getEndConstructId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT
category.
|
StrColumn |
PdbxStructRefSeqFeatureProp.getEndDbMonId() |
The terminal monomer type found at the ending position
in the referenced database entry.
|
StrColumn |
EmMap.getEndianType() |
map file endian type
|
StrColumn |
PdbxDbref.getEndInsCode() |
Insertion code.
|
StrColumn |
PdbxDomainRange.getEndLabelAltId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxSequenceRange.getEndLabelAltId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndLabelAltId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructNcsDomLim.getEndLabelAltId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxDomainRange.getEndLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxRefineTlsGroup.getEndLabelAsymId() |
A component of the identifier for the residue at which the
TLS fragment range ends.
|
StrColumn |
PdbxSequenceRange.getEndLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndLabelAsymId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getEndLabelAsymId() |
A component of the identifier for the residue at which the
conformation segment ends.
|
StrColumn |
StructNcsDomLim.getEndLabelAsymId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
StructSheetRange.getEndLabelAsymId() |
A component of the identifier for the residue at which the
beta-sheet range ends.
|
StrColumn |
PdbxDomainRange.getEndLabelCompId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
PdbxSequenceRange.getEndLabelCompId() |
A component of the identifier for the monomer at which this
segment of the sequence range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndLabelCompId() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
StructConf.getEndLabelCompId() |
A component of the identifier for the residue at which the
conformation segment ends.
|
StrColumn |
StructNcsDomLim.getEndLabelCompId() |
A component of the identifier for the monomer at which this
segment of the domain ends.
|
StrColumn |
StructSheetRange.getEndLabelCompId() |
A component of the identifier for the residue at which the
beta-sheet range ends.
|
StrColumn |
PdbxEntityPolyDomain.getEndMonId() |
The value of _pdbx_entity_poly_domain.begin_mon_id identifies
the monomer at the end of the domain.
|
StrColumn |
PdbxStructRefSeqFeature.getEndPdbInsCode() |
Terminal insertion code of the PDB sequence segment.
|
StrColumn |
PdbxRefineTlsGroup.getEndPDBInsCode() |
A component of the identifier for the residue at which the
TLS fragment range ends.
|
StrColumn |
PdbxStructGroupComponentRange.getEndPDBInsCode() |
Part of the identifier for the component range in this group assignment.
|
StrColumn |
PdbxDbref.getEndResNumber() |
Last residue number.
|
StrColumn |
PdbxStructRefSeqFeature.getEndSeqNum() |
Ending position in the sequence segment
|
StrColumn |
PdbxReferencePublicationList.getEndYear() |
Year in which publication terminated operation.
|
StrColumn |
EmImaging.getEnergyFilter() |
The type of energy filter spectrometer apparatus.
|
StrColumn |
EmImagingOptics.getEnergyfilterLower() |
The energy filter range lower value in electron volts (eV) set by spectrometer.
|
StrColumn |
EmImagingOptics.getEnergyfilterName() |
The type of energy filter spectrometer
|
StrColumn |
EmImagingOptics.getEnergyfilterUpper() |
The energy filter range upper value in electron volts (eV) set by spectrometer.
|
StrColumn |
EmImaging.getEnergyWindow() |
The energy filter range in electron volts (eV)set by spectrometer.
|
StrColumn |
IhmEnsembleInfo.getEnsembleClusteringFeature() |
The parameter/feature used for clustering the models, if applicable.
|
StrColumn |
IhmEnsembleInfo.getEnsembleClusteringMethod() |
The clustering method used to obtain the ensemble, if applicable.
|
StrColumn |
IhmModelingProtocolDetails.getEnsembleFlag() |
A flag to indicate if the modeling involves an ensemble.
|
StrColumn |
IhmEnsembleInfo.getEnsembleName() |
An optional name for the cluster or ensemble for better description.
|
StrColumn |
AtomSitesAltGen.getEnsId() |
This data item is a pointer to _atom_sites_alt_ens.id in the
ATOM_SITES_ALT_ENS category.
|
StrColumn |
StructNcsEnsGen.getEnsId() |
This data item is a pointer to _struct_ncs_ens.id in the
STRUCT_NCS_ENS category.
|
StrColumn |
Em2dCrystalEntity.getEntityAssemblyId() |
Corresponding key in _em_entity_assembly category.
|
StrColumn |
EmEntityAssemblyMolwt.getEntityAssemblyId() |
A reference to _em_entity_assembly.id which uniquely identifies
one assembly or assembly component of the imaged sample.
|
StrColumn |
EmEntityAssemblyNaturalsource.getEntityAssemblyId() |
Pointer to the assembly component defined in the EM ENTITY ASSEMBLY category.
|
StrColumn |
EmEntityAssemblyRecombinant.getEntityAssemblyId() |
Pointer to the expressed component described in the EM ENTITY ASSEMBLY category.
|
StrColumn |
EmExperiment.getEntityAssemblyId() |
Foreign key to the EM_ENTITY_ASSEMBLY category
|
StrColumn |
EmHelicalEntity.getEntityAssemblyId() |
The value of _em_helical_entity.entity_assembly_id
identifies a particular assembly component.
|
StrColumn |
EmSamplePreparation.getEntityAssemblyId() |
This data item is a pointer to _entity_assembly.id in the em_entity_assembly category.
|
StrColumn |
EmVirusEntity.getEntityAssemblyId() |
This data item is a pointer to _em_virus_entity.id in the
ENTITY_ASSEMBLY category.
|
StrColumn |
EmVirusNaturalHost.getEntityAssemblyId() |
Pointer to _em_entity_assembly.id.
|
StrColumn |
EmVirusShell.getEntityAssemblyId() |
The value of _em_virus_shell.entity_assembly_id is
a pointer to _em_entity_assembly.id
category.
|
StrColumn |
IhmModelRepresentationDetails.getEntityAsymId() |
An asym/strand identifier for the entity molecule.
|
StrColumn |
IhmHydroxylRadicalFpRestraint.getEntityDescription() |
A text description of the molecular entity.
|
StrColumn |
IhmModelRepresentationDetails.getEntityDescription() |
A text description of the molecular entity
|
StrColumn |
IhmPolyProbePosition.getEntityDescription() |
Description of the entity.
|
StrColumn |
IhmResiduesNotModeled.getEntityDescription() |
A text description of the molecular entity, whose residues are not modeled.
|
StrColumn |
IhmStartingModelDetails.getEntityDescription() |
A text description of the molecular entity
|
StrColumn |
IhmStructAssemblyDetails.getEntityDescription() |
A text description of the molecular entity
|
StrColumn |
IhmCrossLinkList.getEntityDescription1() |
A text description of molecular entity 1.
|
StrColumn |
IhmPredictedContactRestraint.getEntityDescription1() |
A text description of molecular entity 1.
|
StrColumn |
IhmCrossLinkList.getEntityDescription2() |
A text description of molecular entity 2.
|
StrColumn |
IhmPredictedContactRestraint.getEntityDescription2() |
A text description of molecular entity 2.
|
StrColumn |
EntityKeywords.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntityNameCom.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntityNameSys.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntityPoly.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntityPolySeq.getEntityId() |
This data item is a pointer to _entity_poly.entity_id in the
ENTITY_POLY category.
|
StrColumn |
EntitySrcGen.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntitySrcNat.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
IhmEntityPolySegment.getEntityId() |
A unique identifier for the polymeric entity.
|
StrColumn |
IhmGaussianObjEnsemble.getEntityId() |
The entity identifier corresponding to this gaussian object.
|
StrColumn |
IhmGaussianObjSite.getEntityId() |
The entity identifier corresponding to this gaussian object.
|
StrColumn |
IhmHydroxylRadicalFpRestraint.getEntityId() |
The entity identifier.
|
StrColumn |
IhmLigandProbe.getEntityId() |
The entity id of the ligand.
|
StrColumn |
IhmLocalizationDensityFiles.getEntityId() |
The entity identifier corresponding to this localization density.
|
StrColumn |
IhmModelRepresentationDetails.getEntityId() |
A unique identifier distinct molecular entities.
|
StrColumn |
IhmNonPolyFeature.getEntityId() |
The entity identifier of the non-polymer feature.
|
StrColumn |
IhmPolyAtomFeature.getEntityId() |
The entity identifier of the atom.
|
StrColumn |
IhmPolyProbePosition.getEntityId() |
A unique identifier for the entity where the probe is attached.
|
StrColumn |
IhmPolyResidueFeature.getEntityId() |
The entity identifier for residue / residue range.
|
StrColumn |
IhmResiduesNotModeled.getEntityId() |
A unique identifier to the molecular entity, whose residues are not modeled.
|
StrColumn |
IhmSphereObjSite.getEntityId() |
The entity identifier corresponding to this sphere object.
|
StrColumn |
IhmStartingModelCoord.getEntityId() |
The entity identifier corresponding to this coordinate position.
|
StrColumn |
IhmStartingModelDetails.getEntityId() |
A unique identifier for the distinct molecular entities.
|
StrColumn |
IhmStartingModelSeqDif.getEntityId() |
A unique identifier for the distinct molecular entities.
|
StrColumn |
IhmStructAssemblyDetails.getEntityId() |
A unique identifier for distinct molecular entities.
|
StrColumn |
PdbxBranchScheme.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxConstruct.getEntityId() |
In cases where the construct IS found in the co-ordinates then this
item provides a pointer to _entity.id in the ENTITY category for
the corresponding molecule.
|
StrColumn |
PdbxDepuiEntityFeatures.getEntityId() |
A reference to the _entity.id in the ENTITY category
|
StrColumn |
PdbxDepuiEntityStatusFlags.getEntityId() |
A reference to the _entity.id in the ENTITY_POLY category
|
StrColumn |
PdbxEntityAssembly.getEntityId() |
An enity identifier.
|
StrColumn |
PdbxEntityBranch.getEntityId() |
The entity id for this branched entity.
|
StrColumn |
PdbxEntityBranchDescriptor.getEntityId() |
This data item is a pointer to _entity_poly.entity_id in the ENTITY
category.
|
StrColumn |
PdbxEntityBranchLink.getEntityId() |
The entity id for this branched entity.
|
StrColumn |
PdbxEntityBranchList.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxEntityFuncBindMode.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxEntityName.getEntityId() |
Pointer to _entity.id.
|
StrColumn |
PdbxEntityNameInstance.getEntityId() |
This data item holds the entity_id of this
entity within the entry.
|
StrColumn |
PdbxEntityNonpoly.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxEntityPolyCompLinkList.getEntityId() |
The entity id for this branched entity.
|
StrColumn |
PdbxEntityPolyDomain.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxEntityPolyNaNonstandard.getEntityId() |
This data item is a pointer to _entity.id in the
ENTITY category.
|
StrColumn |
PdbxEntityPolyNaType.getEntityId() |
This data item is a pointer to _entity.id in the
ENTITY category.
|
StrColumn |
PdbxEntityPolyProteinClass.getEntityId() |
This data item is a pointer to _entity.id in the
ENTITY category.
|
StrColumn |
PdbxEntityProdProtocol.getEntityId() |
The value of _pdbx_entity_prod_protocol.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenCharacter.getEntityId() |
The value of _pdbx_entity_src_gen_character.entity_id uniquely identifies
each protein contained in the project target complex proteins whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenChrom.getEntityId() |
The value of _pdbx_entity_src_gen_chrom.entity_id uniquely identifies
each protein contained in the project target complex proteins whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenClone.getEntityId() |
The value of _pdbx_entity_src_gen_clone.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenCloneLigation.getEntityId() |
This item is a pointer to _pdbx_entity_src_gen_clone.entity_id in the
PDBX_ENTITY_SRC_GEN_CLONE category.
|
StrColumn |
PdbxEntitySrcGenCloneRecombination.getEntityId() |
This item is a pointer to _pdbx_entity_src_gen_clone.entity_id in the
PDBX_ENTITY_SRC_GEN_CLONE category.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getEntityId() |
The entity id for this chimeric entity.
|
StrColumn |
PdbxEntitySrcGenExpress.getEntityId() |
The value of _pdbx_entity_src_gen_express.entity_id uniquely identifies
each protein contained in the project target complex proteins whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenExpressTimepoint.getEntityId() |
The value of _pdbx_entity_src_gen_express_timepoint.entity_id is a pointer
to _pdbx_entity_src_gen_express.entity_id
|
StrColumn |
PdbxEntitySrcGenFract.getEntityId() |
The value of _pdbx_entity_src_gen_fract.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenLysis.getEntityId() |
The value of _pdbx_entity_src_gen_lysis.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getEntityId() |
The value of _pdbx_entity_src_gen_prod_digest.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenProdOther.getEntityId() |
The value of _pdbx_entity_src_gen_prod_other.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenProdOtherParameter.getEntityId() |
The value of _pdbx_entity_src_gen_prod_other_parameter.entity_id is a pointer
to _pdbx_entity_src_gen_prod_other.entity_id
|
StrColumn |
PdbxEntitySrcGenProdPcr.getEntityId() |
The value of _pdbx_entity_src_gen_prod_pcr.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getEntityId() |
The value of _pdbx_entity_src_gen_proteolysis.entity_id uniquely identifies
each protein contained in the project target complex proteins whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenPure.getEntityId() |
The value of _pdbx_entity_src_gen_pure.entity_id uniquely identifies
each protein contained in the project target complex proteins whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcGenRefold.getEntityId() |
The value of _pdbx_entity_src_gen_refold.entity_id uniquely identifies
each protein contained in the project target protein complex whose
structure is to be determined.
|
StrColumn |
PdbxEntitySrcSyn.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxLinkedEntityList.getEntityId() |
The value of _pdbx_linked_entity_list.ref_entity_id is a unique identifier
the a constituent entity within this reference molecule.
|
StrColumn |
PdbxMoleculeFeaturesDepositorInfo.getEntityId() |
The value of _pdbx_molecule_features_depositor_info.entity_id is a reference to
to the entity identifier for this molecule.
|
StrColumn |
PdbxNonpolyScheme.getEntityId() |
Pointer to _atom_site.label_entity_id.
|
StrColumn |
PdbxPolySeqScheme.getEntityId() |
Pointer to _entity.id.
|
StrColumn |
PdbxPrereleaseSeq.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxSeqMapDepositorInfo.getEntityId() |
This data item is a pointer to _entity_poly.entity_id in the ENTITY_POLY category.
|
StrColumn |
PdbxStructEntityInst.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
StructAsym.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
StructRef.getEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
EntityLink.getEntityId1() |
The entity ID of the first of the two entities joined by the
link.
|
StrColumn |
IhmCrossLinkList.getEntityId1() |
The entity identifier for the first monomer partner in the cross link
This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.
|
StrColumn |
IhmCrossLinkRestraint.getEntityId1() |
The entity identifier for the first monomer partner in the cross link
This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category
and the _ihm_cross_link_restraint.entity_id_1 in the IHM_CROSS_LINK_RESTRAINT category.
|
StrColumn |
IhmPredictedContactRestraint.getEntityId1() |
The entity identifier for the first monomer partner in the predicted contact.
|
StrColumn |
PdbxLinkedEntityLinkList.getEntityId1() |
The entity id of the first of the two entities joined by the
linkage.
|
StrColumn |
EntityLink.getEntityId2() |
The entity ID of the second of the two entities joined by the
link.
|
StrColumn |
IhmCrossLinkList.getEntityId2() |
The entity identifier for the second monomer partner in the cross link
This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.
|
StrColumn |
IhmCrossLinkRestraint.getEntityId2() |
The entity identifier for the second monomer partner in the cross link
This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category
and the _ihm_cross_link_restraint.entity_id_2 in the IHM_CROSS_LINK_RESTRAINT category.
|
StrColumn |
IhmPredictedContactRestraint.getEntityId2() |
The entity identifier for the second monomer partner in the predicted contact.
|
StrColumn |
PdbxLinkedEntityLinkList.getEntityId2() |
The entity id of the second of the two entities joined by the
linkage.
|
StrColumn |
EmEntityAssembly.getEntityIdList() |
macromolecules associated with this component, if defined
as comma separated list of entity ids (integers).
|
StrColumn |
PdbxStructAssemblyGen.getEntityInstId() |
This data item is a pointer to _pdbx_struct_entity_inst.id in
the PDBX_STRUCT_ENTITY_INST category.
|
StrColumn |
PdbxStructAsymGen.getEntityInstId() |
This data item is a pointer to _pdbx_struct_entity_inst.id in
the PDBX_STRUCT_ENTITY_INST category.
|
StrColumn |
PdbxStructMsymGen.getEntityInstId() |
This data item is a pointer to _pdbx_struct_entity_inst.id in
the PDBX_STRUCT_ENTITY_INST category.
|
StrColumn |
IhmFeatureList.getEntityType() |
The type of entity.
|
StrColumn |
EmObsolete.getEntry() |
Entry made obsolete
|
StrColumn |
EmSupersede.getEntry() |
Newer entry that replaces this entry
|
StrColumn |
PdbxSolnScatterModel.getEntryFittingList() |
A list of the entries used to fit the model
to the scattering data
|
StrColumn |
AtomSites.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Cell.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
CellMeasurement.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Chemical.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
ChemicalFormula.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Computing.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Database.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
DatabasePDBMatrix.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Em2dProjectionSelection.getEntryId() |
entry id
|
StrColumn |
Em3dFitting.getEntryId() |
This data item is a pointer to _entry_id in
the ENTRY category.
|
StrColumn |
Em3dReconstruction.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmAdmin.getEntryId() |
This data item is a pointer to _entry.id.
|
StrColumn |
EmAssembly.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmDepositorInfo.getEntryId() |
This data item is a pointer to the ENTRY category.
|
StrColumn |
EmDepui.getEntryId() |
Primary key
|
StrColumn |
EmDetector.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmExperiment.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmImageScans.getEntryId() |
This data item is a pointer to _entry.id in the
ENTRY category.
|
StrColumn |
EmImaging.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmMap.getEntryId() |
This data item is a pointer to the ENTRY category.
|
StrColumn |
EmMapDepositorInfo.getEntryId() |
This data item is a pointer to the ENTRY category.
|
StrColumn |
EmSamplePreparation.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmSingleParticleEntity.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmVitrification.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EntryLink.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Exptl.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Geom.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Journal.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
NdbStructConfNa.getEntryId() |
This data item is a pointer to _entry.id in the
ENTRY category.
|
StrColumn |
NdbStructFeatureNa.getEntryId() |
This data item is a pointer to _entry.id in the
ENTRY category.
|
StrColumn |
PdbxAtlas.getEntryId() |
Entry ID.
|
StrColumn |
PdbxAudit.getEntryId() |
The value of _pdbx_audit.entry_id identifies the data block.
|
StrColumn |
PdbxConstruct.getEntryId() |
The value of _pdbx_construct.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxConstructFeature.getEntryId() |
The value of _pdbx_construct_feature.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxCoord.getEntryId() |
The entry identifier.
|
StrColumn |
PdbxDatabaseMessage.getEntryId() |
The value of _pdbx_database_message.entry_id identifies the data block.
|
StrColumn |
PdbxDatabasePDBMaster.getEntryId() |
A link to _ENTRY.id
|
StrColumn |
PdbxDatabasePdbOmit.getEntryId() |
The value of _pdbx_database_pdb_omit.entry_id identifies the data block.
|
StrColumn |
PdbxDatabaseProc.getEntryId() |
The value of _pdbx_database_proc.entry_id identifies the data block.
|
StrColumn |
PdbxDatabaseStatus.getEntryId() |
The value of _pdbx_database_status.entry_id identifies the data block.
|
StrColumn |
PdbxDatabaseStatusHistory.getEntryId() |
The value of _pdbx_database_status_history.entry_id identifies the entry data block.
|
StrColumn |
PdbxDataProcessingCell.getEntryId() |
The value of _pdbx_data_processing_cell.entry_id identifies the data block.
|
StrColumn |
PdbxDataProcessingDetector.getEntryId() |
The value of _pdbx_data_processing_detector.entry_id identifies the data block.
|
StrColumn |
PdbxDataProcessingReflns.getEntryId() |
The value of _pdbx_data_processing_reflns.entry_id identifies the data block.
|
StrColumn |
PdbxEntityProdProtocol.getEntryId() |
The value of _pdbx_entity_prod_protocol.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenCharacter.getEntryId() |
The value of _pdbx_entity_src_gen_character.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenChrom.getEntryId() |
The value of _pdbx_entity_src_gen_chrom.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenClone.getEntryId() |
The value of _pdbx_entity_src_gen_clone.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenCloneLigation.getEntryId() |
This item is a pointer to _pdbx_entity_src_gen_clone.entry_id in the
PDBX_ENTITY_SRC_GEN_CLONE category.
|
StrColumn |
PdbxEntitySrcGenCloneRecombination.getEntryId() |
This item is a pointer to _pdbx_entity_src_gen_clone.entry_id in the
PDBX_ENTITY_SRC_GEN_CLONE category.
|
StrColumn |
PdbxEntitySrcGenExpress.getEntryId() |
The value of _pdbx_entity_src_gen_express.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenExpressTimepoint.getEntryId() |
The value of _pdbx_entity_src_gen_express_timepoint.entry_id is a pointer
to _pdbx_entity_src_gen_express.entry_id
|
StrColumn |
PdbxEntitySrcGenFract.getEntryId() |
The value of _pdbx_entity_src_gen_fract.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenLysis.getEntryId() |
The value of _pdbx_entity_src_gen_lysis.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getEntryId() |
The value of _pdbx_entity_src_gen_prod_digest.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenProdOther.getEntryId() |
The value of _pdbx_entity_src_gen_prod_other.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenProdOtherParameter.getEntryId() |
The value of _pdbx_entity_src_gen_prod_other_parameter.entry_id is a pointer
to _pdbx_entity_src_gen_prod_other.entry.id
|
StrColumn |
PdbxEntitySrcGenProdPcr.getEntryId() |
The value of _pdbx_entity_src_gen_prod_pcr.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getEntryId() |
The value of _pdbx_entity_src_gen_proteolysis.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenPure.getEntryId() |
The value of _pdbx_entity_src_gen_pure.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntitySrcGenRefold.getEntryId() |
The value of _pdbx_entity_src_gen_refold.entry_id uniquely identifies
a sample consisting of one or more proteins whose structure is
to be determined.
|
StrColumn |
PdbxEntryDetails.getEntryId() |
This item identifies the entry.
|
StrColumn |
PdbxExptlPd.getEntryId() |
The value of _pdbx_exptl_pd.entry_id uniquely identifies a
record in the PDBX_EXPTL_PD category.
|
StrColumn |
PdbxHelicalSymmetry.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxHelicalSymmetryDepositorInfo.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxNaStructKeywds.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxNmrAssignedChemShiftList.getEntryId() |
Pointer to '_entry.ID'
|
StrColumn |
PdbxNmrChemShiftExperiment.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrChemShiftRef.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrChemShiftReference.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrChemShiftSoftware.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrComputing.getEntryId() |
The entry ID for the structure determination.
|
StrColumn |
PdbxNmrConstraintFile.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrConstraints.getEntryId() |
You can leave this blank as an ID will be assigned by the MSD
to the constraint file.
|
StrColumn |
PdbxNmrDetails.getEntryId() |
The entry ID for the structure determination.
|
StrColumn |
PdbxNmrEnsemble.getEntryId() |
Leave this blank as the ID is provided by the MSD
|
StrColumn |
PdbxNmrEnsembleRms.getEntryId() |
'?'
|
StrColumn |
PdbxNmrForceConstants.getEntryId() |
You can leave this blank as an ID will be assigned by the RCSB.
|
StrColumn |
PdbxNmrRefine.getEntryId() |
You can leave this blank as an ID will be assigned by the RCSB
to the constraint file.
|
StrColumn |
PdbxNmrRepresentative.getEntryId() |
msd will assign the ID.
|
StrColumn |
PdbxNmrSoftwareTask.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrSpectralDim.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrSpectralPeakList.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrSpectralPeakSoftware.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrSystematicChemShiftOffset.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxNmrUpload.getEntryId() |
Pointer to '_entry.id'
|
StrColumn |
PdbxPhasingDm.getEntryId() |
The value of _pdbx_phasing_dm.entry_id identifies the data block.
|
StrColumn |
PdbxPhasingMR.getEntryId() |
The value of _pdbx_phasing_MR.entry_id identifies the data block.
|
StrColumn |
PdbxPointSymmetry.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxPointSymmetryDepositorInfo.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxPostProcessDetails.getEntryId() |
The value of _pdbx_post_process_details.entry_id identifies the data block.
|
StrColumn |
PdbxPostProcessStatus.getEntryId() |
The value of _pdbx_post_process_status.entry_id identifies the data block.
|
StrColumn |
PdbxRefine.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxReRefinement.getEntryId() |
The identifier for entry where the experimental data was obtained.
|
StrColumn |
PdbxRmsDevsCovalent.getEntryId() |
Pointer to the entry id.
|
StrColumn |
PdbxSolnScatter.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PdbxSummaryFlags.getEntryId() |
Entry ID.
|
StrColumn |
PdbxVersion.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PhasingAveraging.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PhasingIsomorphous.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PhasingMAD.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PhasingMIR.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Publ.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
PublManuscriptIncl.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Refine.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
RefineAnalyze.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Reflns.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Struct.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
StructKeywords.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
StructMonDetails.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
Symmetry.getEntryId() |
This data item is a pointer to _entry.id in the ENTRY category.
|
StrColumn |
EmVirusEntity.getEnveloped() |
Flag to indicate if the virus is enveloped or not.
|
StrColumn |
PdbxEntitySrcGenChrom.getEquilibrationBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxDccDensity.getError() |
Details of any error or warning messages.
|
StrColumn |
PdbxNmrAssignedChemShiftList.getErrorDerivationMethod() |
Method used to derive the estimated error in the reported chemical shifts.
|
StrColumn |
Em3dReconstruction.getEulerAnglesDetails() |
euler angles details
|
StrColumn |
PdbxColumninfo.getExample() |
SQL column example.
|
StrColumn |
EmEntityAssemblyMolwt.getExperimentalFlag() |
Identifies whether the given molecular weight was derived experimentally.
|
StrColumn |
PdbxDepuiEntryDetails.getExperimentalMethods() |
Comma separated list of supported experimental methods.
|
StrColumn |
PdbxStructAssemblyAuthEvidence.getExperimentalSupport() |
Provides the experimental method to determine the state of this assembly
|
StrColumn |
PdbxStructAssemblyAuthEvidenceDepositorInfo.getExperimentalSupport() |
Provides the experimental method to determine the state of this assembly
|
StrColumn |
EmFigureDepositorInfo.getExperimentId() |
This data item optionally associates an image (figure) with an experiment.
|
StrColumn |
EmLayerLines.getExperimentId() |
This data item is a pointer to the EM EXPERIMENT category.
|
StrColumn |
EmLayerLinesDepositorInfo.getExperimentId() |
This data item is a pointer to the EMD_STRUCT category.
|
StrColumn |
EmMapDepositorInfo.getExperimentId() |
This data item optionally associates a map with a data item in the EM_EXPERIMENT category.
|
StrColumn |
EmSpecimen.getExperimentId() |
Pointer to _em_experiment.id.
|
StrColumn |
EmStructureFactors.getExperimentId() |
This data item is a pointer to the EM EXPERIMENT category.
|
StrColumn |
EmStructureFactorsDepositorInfo.getExperimentId() |
This data item is an optional pointer to the EM_EXPERIMENT category.
|
StrColumn |
PdbxNmrExptl.getExperimentId() |
A numerical ID for each experiment.
|
StrColumn |
PdbxNmrChemShiftExperiment.getExperimentName() |
The name of an experiment used to determine the data reported.
|
StrColumn |
PdbxDataProcessingDetector.getExperimentor() |
Name of experimentor.
|
StrColumn |
IhmMultiStateModeling.getExperimentType() |
The type of multi-state modeling experiment carried out.
|
StrColumn |
EntitySrcGen.getExpressionSystemId() |
A unique identifier for the expression system.
|
StrColumn |
PhasingMADClust.getExptId() |
This data item is a pointer to _phasing_MAD_expt.id in the
PHASING_MAD_EXPT category.
|
StrColumn |
PhasingMADRatio.getExptId() |
This data item is a pointer to _phasing_MAD_expt.id in the
PHASING_MAD_EXPT category.
|
StrColumn |
PhasingMADSet.getExptId() |
This data item is a pointer to _phasing_MAD_expt.id in the
PHASING_MAD_EXPT category.
|
StrColumn |
PdbxNmrForceConstants.getExptl13CShiftTermUnits() |
The units for the force constant for the 13C shift constraints
term.
|
StrColumn |
PdbxNmrForceConstants.getExptl1HShiftTermUnits() |
The units for the force constant for the 1H shift constraints term.
|
StrColumn |
PdbxNmrForceConstants.getExptlDipolarCouplingTermUnits() |
The units for the force constant for the dipolar coupling
constraints term.
|
StrColumn |
PdbxNmrForceConstants.getExptlDIsotopeShiftTermUnits() |
The units for the force constant for the Deuterium isotope
shift constraints term.
|
StrColumn |
PdbxNmrForceConstants.getExptlDistanceTermUnits() |
The units for the force constant for the distance
constraints term.
|
StrColumn |
PdbxNmrForceConstants.getExptlJCouplingTermUnits() |
The units for the force constant for the J coupling term.
|
StrColumn |
PdbxNmrForceConstants.getExptlTorsionAnglesTermUnits() |
The units for the force constant for the torsion angle
constraints term.
|
StrColumn |
PdbxAuditConformExtension.getExtensionDictLocation() |
A file name or uniform resource locator (URL) for the
file containing the extension dictionary.
|
StrColumn |
PdbxAuditConformExtension.getExtensionDictName() |
An identifier for the extension dictionary to which the current data block conforms.
|
StrColumn |
PdbxAuditConformExtension.getExtensionDictVersion() |
The version number of the extension dictionary to which the currrent data block conforms.
|
StrColumn |
PdbxNmrChemShiftRef.getExternalRefAxis() |
The axis of the external chemical shift reference sample relative to the
static field (Bo) of the spectrometer.
|
StrColumn |
PdbxNmrChemShiftRef.getExternalRefLoc() |
External chemical shift references are defined as either located within
the sample (e.g., as a capillary) or external to the sample and are inserted into
the spectrometer before, after, or both before and after the sample containing
the molecular system studied in the entry.
|
StrColumn |
PdbxNmrChemShiftRef.getExternalRefSampleGeometry() |
The geometrical shape of the external reference sample.
|
StrColumn |
PublManuscriptIncl.getExtraDefn() |
Flags whether the corresponding data item marked for inclusion
in a journal request list is a standard CIF definition or not.
|
StrColumn |
PublManuscriptIncl.getExtraInfo() |
A short note indicating the reason why the author wishes the
corresponding data item marked for inclusion in the journal
request list to be published.
|
StrColumn |
PublManuscriptIncl.getExtraItem() |
Specifies the inclusion of specific data into a manuscript
which are not normally requested by the journal.
|
StrColumn |
PdbxFamilyGroupIndex.getFamilyPrdId() |
This data item is a reference to the BIRD identifier for families.
|
StrColumn |
PdbxFamilyPrdAudit.getFamilyPrdId() |
This data item is a pointer to _pdbx_reference_molecule_family.family_prd_id in the
pdbx_reference_molecule category.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getFamilyPrdId() |
The value of _pdbx_reference_molecule_annotation.family_prd_id is a reference to
_pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.
|
StrColumn |
PdbxReferenceMoleculeDetails.getFamilyPrdId() |
The value of _pdbx_reference_molecule_details.family_prd_id is a reference to
_pdbx_reference_molecule_list.family_prd_id' in category PDBX_REFERENCE_MOLECULE_FAMILY.
|
StrColumn |
PdbxReferenceMoleculeFamily.getFamilyPrdId() |
The value of _pdbx_reference_entity.family_prd_id must uniquely identify a record in the
PDBX_REFERENCE_MOLECULE_FAMILY list.
|
StrColumn |
PdbxReferenceMoleculeFeatures.getFamilyPrdId() |
The value of _pdbx_reference_molecule_features.family_prd_id is a reference to
_pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.
|
StrColumn |
PdbxReferenceMoleculeList.getFamilyPrdId() |
The value of _pdbx_reference_molecule_list.family_prd_id is a reference to
_pdbx_reference_molecule_family.family_prd_id' in category PDBX_REFERENCE_MOLECULE_FAMILY.
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getFamilyPrdId() |
The value of _pdbx_reference_molecule_related_structures.family_prd_id is a reference to
_pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.
|
StrColumn |
PdbxReferenceMoleculeSynonyms.getFamilyPrdId() |
The value of _pdbx_reference_molecule_synonyms.family_prd_id is a reference to
_pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.
|
StrColumn |
AuditContactAuthor.getFax() |
The facsimile telephone number of the author of the data
block to whom correspondence should be addressed.
|
StrColumn |
PdbxContactAuthor.getFax() |
The facsimile telephone number of the author of the data
block to whom correspondence should be addressed.
|
StrColumn |
IhmModelingPostProcess.getFeature() |
The parameter/feature used in the post modeling analysis.
|
StrColumn |
NdbStructConfNa.getFeature() |
This data item identifies a secondary structure
feature of this entry.
|
StrColumn |
NdbStructFeatureNa.getFeature() |
This data item identifies a structural
feature of this entry.
|
StrColumn |
PdbxEntityPolyNaNonstandard.getFeature() |
This data item describes the nonstandard feature of
the nucleic acid polymer entity.
|
StrColumn |
PdbxFeatureAssembly.getFeature() |
The value of _pdbx_feature_assembly.feature_name.
|
StrColumn |
PdbxFeatureDomain.getFeature() |
The value of _pdbx_feature_domain.feature_name.
|
StrColumn |
PdbxFeatureEntry.getFeature() |
The value of _pdbx_feature_entry.feature_name.
|
StrColumn |
PdbxFeatureMonomer.getFeature() |
The value of _pdbx_feature_monomer.feature_name.
|
StrColumn |
PdbxFeatureSequenceRange.getFeature() |
The value of _pdbx_feature_sequence_range.feature_name.
|
StrColumn |
PdbxFeatureAssembly.getFeatureAssignedBy() |
_pdbx_feature_assembly.feature_assigned_by identifies
the individual, organization or program that assigned
the feature.
|
StrColumn |
PdbxFeatureDomain.getFeatureAssignedBy() |
_pdbx_feature_domain.feature_assigned_by identifies
the individual, organization or program that
assigned the feature.
|
StrColumn |
PdbxFeatureEntry.getFeatureAssignedBy() |
_pdbx_feature_entry.feature_assigned_by identifies
the individual, organization or program that
assigned the feature.
|
StrColumn |
PdbxFeatureMonomer.getFeatureAssignedBy() |
_pdbx_feature_monomer.feature_assigned_by identifies
the individual, organization or program that
assigned the feature.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureAssignedBy() |
_pdbx_feature_sequence_range.feature_assigned_by identifies
the individual, organization or program that assigned
the feature.
|
StrColumn |
PdbxFeatureAssembly.getFeatureCitationId() |
_pdbx_feature_assembly.feature_citation_id is a
reference to a citation in the CITATION category
|
StrColumn |
PdbxFeatureDomain.getFeatureCitationId() |
_pdbx_feature_domain.feature_citation_id is a
reference to a citation in the CITATION category.
|
StrColumn |
PdbxFeatureEntry.getFeatureCitationId() |
_pdbx_feature_entry.feature_citation_id is a
reference to a citation in the CITATION category
|
StrColumn |
PdbxFeatureMonomer.getFeatureCitationId() |
_pdbx_feature_monomer.feature_citation_id is a
reference to a citation in the CITATION category.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureCitationId() |
_pdbx_feature_sequence_range.feature_citation_id is a
reference to a citation in the CITATION category
|
StrColumn |
PdbxFeatureAssembly.getFeatureIdentifier() |
_pdbx_feature_assembly_range.feature_identifier is an
additional identifier used to identify or
accession this feature.
|
StrColumn |
PdbxFeatureDomain.getFeatureIdentifier() |
_pdbx_feature_domain.feature_identifier is an
additional identifier used to identify or
accession this feature.
|
StrColumn |
PdbxFeatureEntry.getFeatureIdentifier() |
_pdbx_feature_entry.feature_identifier is an
additional identifier used to identify or
accession this feature.
|
StrColumn |
PdbxFeatureMonomer.getFeatureIdentifier() |
_pdbx_feature_monomer.feature_identifier is an
additional identifier used to identify or
accession this feature.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureIdentifier() |
_pdbx_feature_sequence_range.feature_identifier is an
additional identifier used to identify or
accession this feature.
|
StrColumn |
IhmModelingPostProcess.getFeatureName() |
The name of the parameter/feature used in the post modeling analysis.
|
StrColumn |
PdbxChemCompModelFeature.getFeatureName() |
The component model feature type.
|
StrColumn |
PdbxFeatureAssembly.getFeatureName() |
_pdbx_feature_assembly.feature_name identifies a feature
by name.
|
StrColumn |
PdbxFeatureDomain.getFeatureName() |
_pdbx_feature_domain.feature_name identifies a feature
by name.
|
StrColumn |
PdbxFeatureEntry.getFeatureName() |
_pdbx_feature_entry.feature_name identifies a feature
by name.
|
StrColumn |
PdbxFeatureMonomer.getFeatureName() |
_pdbx_feature_monomer.feature_name identifies a feature
by name.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureName() |
_pdbx_feature_sequence_range.feature_name identifies a feature
by name.
|
StrColumn |
PdbxFeatureAssembly.getFeatureSoftwareId() |
_pdbx_feature_assembly.feature_software_id is a
reference to an application described in the
SOFTWARE category.
|
StrColumn |
PdbxFeatureDomain.getFeatureSoftwareId() |
_pdbx_feature_domain.feature_software_id is a
reference to an application described in the
SOFTWARE category.
|
StrColumn |
PdbxFeatureEntry.getFeatureSoftwareId() |
_pdbx_feature_entry.feature_software_id is a
reference to an application described in the
SOFTWARE category.
|
StrColumn |
PdbxFeatureMonomer.getFeatureSoftwareId() |
_pdbx_feature_monomer.feature_software_id is a
reference to an application described in the
SOFTWARE category.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureSoftwareId() |
_pdbx_feature_sequence_range.feature_software_id is a
reference to an application descripted in the
SOFTWARE category.
|
StrColumn |
IhmFeatureList.getFeatureType() |
The type of feature.
|
StrColumn |
PdbxChemCompAtomFeature.getFeatureType() |
The feature assigned to this atom.
|
StrColumn |
PdbxEntityInstanceFeature.getFeatureType() |
A feature type associated with entity instance.
|
StrColumn |
PdbxFeatureAssembly.getFeatureType() |
_pdbx_feature_assembly.feature_type identifies the
type of feature.
|
StrColumn |
PdbxFeatureDomain.getFeatureType() |
_pdbx_feature_domain.feature_type identifies the
type of feature.
|
StrColumn |
PdbxFeatureEntry.getFeatureType() |
_pdbx_feature_entry.feature_type identifies the
type of feature.
|
StrColumn |
PdbxFeatureMonomer.getFeatureType() |
_pdbx_feature_monomer.feature_type identifies the
type of feature.
|
StrColumn |
PdbxFeatureSequenceRange.getFeatureType() |
_pdbx_feature_sequence_range.feature_type identifies the
type of feature.
|
StrColumn |
PdbxChemCompModelFeature.getFeatureValue() |
The component feature value.
|
StrColumn |
EmTomographySpecimen.getFiducialMarkers() |
'YES' indicates that fiducial markers were used in the specimen preparation
|
StrColumn |
EmFscCurve.getFile() |
FSC file name.
|
StrColumn |
EmInterpretFigure.getFile() |
The name of the image file associated with the map entry
|
StrColumn |
EmLayerLines.getFile() |
The name of the layer line file associated with the map entry
|
StrColumn |
EmMap.getFile() |
Map file name.
|
StrColumn |
EmStructureFactors.getFile() |
The name of the structure factor file associated with the map entry
|
StrColumn |
PdbxDepuiUpload.getFileContentType() |
The content type of the uploaded file.
|
StrColumn |
IhmExternalFiles.getFileFormat() |
Format of the external file.
|
StrColumn |
PdbxDepuiUpload.getFileName() |
The name of the uploaded file.
|
StrColumn |
PdbxRefineAuxFile.getFileName() |
Auxilary file name.
|
StrColumn |
IhmExternalFiles.getFilePath() |
The relative path (including filename) for each external file.
|
StrColumn |
PdbxDepuiUpload.getFileType() |
The internal file type of the uploaded file.
|
StrColumn |
PdbxRefineAuxFile.getFileType() |
Auxilary file type.
|
StrColumn |
EmSampleSupport.getFilmMaterial() |
The support material covering the em grid.
|
StrColumn |
EmImageRecording.getFilmOrDetectorModel() |
The detector type used for recording images.
|
StrColumn |
PdbxExptlCrystalCryoTreatment.getFinalSolutionDetails() |
Details of the final solution used in the treatment of this crystal
|
StrColumn |
IhmSasRestraint.getFittingAtomType() |
The type of atoms in the model fit to the SAS data.
|
StrColumn |
EmSoftware.getFittingId() |
pointer to _em_3d_fitting.id in the EM_3D_FITTING category.
|
StrColumn |
Ihm3demRestraint.getFittingMethod() |
Method used to fit the model to the 3DEM map.
|
StrColumn |
IhmEprRestraint.getFittingMethod() |
The method used for fitting the model to the EPR data.
|
StrColumn |
IhmSasRestraint.getFittingMethod() |
The method used for fitting the model to the SAS data.
|
StrColumn |
Ihm3demRestraint.getFittingMethodCitationId() |
The citation id of the citation for the fitting method used.
|
StrColumn |
IhmEprRestraint.getFittingMethodCitationId() |
Identifier pointing to the citation for the fitting method.
|
StrColumn |
IhmEprRestraint.getFittingParticleType() |
The type of particle fit to the EPR data.
|
StrColumn |
IhmEprRestraint.getFittingState() |
An indicator to single or multiple state fitting.
|
StrColumn |
IhmSasRestraint.getFittingState() |
An indicator to single or multiple state fitting.
|
StrColumn |
PdbxDccRsccMapman.getFlag() |
Residue with density problem will be flagged as P.
|
StrColumn |
PdbxSummaryFlags.getFlagId() |
A feature flag name.
|
StrColumn |
PdbxSummaryFlags.getFlagValue() |
A feature flag value
|
StrColumn |
PublAuthor.getFootnote() |
A footnote accompanying an author's name in the list of authors
of a paper.
|
StrColumn |
AtomSite.getFootnoteId() |
The value of _atom_site.footnote_id must match an ID
specified by _atom_sites_footnote.id in the
ATOM_SITES_FOOTNOTE list.
|
StrColumn |
EmMap.getFormat() |
map format
|
StrColumn |
PublBody.getFormat() |
Code indicating the appropriate typesetting conventions
for accented characters and special symbols in the text
section.
|
StrColumn |
PdbxConnect.getFormul() |
Place-holder for PDB record FORMUL
|
StrColumn |
ChemComp.getFormula() |
The formula for the chemical component.
|
StrColumn |
EmBufferComponent.getFormula() |
formula for buffer component
|
StrColumn |
PdbxChemCompDepositorInfo.getFormula() |
The formula for the chemical component.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getFormula() |
The observed formula for the chemical component in the deposited coordinates.
|
StrColumn |
PdbxReferenceMolecule.getFormula() |
The formula for the reference entity.
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getFormula() |
The formula for the reference entity.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getForwardPrimerId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.
|
StrColumn |
PdbxNaStrandInfo.getFractNAStrandPerAsymUnit() |
Size of drug molecules per asymmetric unit.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getFromAtomId() |
The atom identifier/name in the second of the two constituents containing the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getFromAtomStereoConfig() |
The chiral configuration of the second atom making the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getFromCompId() |
The component identifier in the second of the two constituents containing the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getFromLeavingAtomId() |
The leaving atom identifier/name bonded to the second atom making the linkage.
|
StrColumn |
Em3dReconstruction.getFscType() |
type of FSC curve used to determine map resolution
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getFullMatrices() |
Transformation matrix as provided by depositor
|
StrColumn |
PdbxSGProject.getFullNameOfCenter() |
The value identifies the full name of center.
|
StrColumn |
PdbxStructBiolFunc.getFunction() |
The function assigned to the biological assembly.
|
StrColumn |
PdbxAuditSupport.getFundingOrganization() |
The name of the organization providing funding support for the
entry.
|
StrColumn |
PdbxEntitySrcGenClone.getGeneInsertMethod() |
The method used to insert the gene into the vector.
|
StrColumn |
EntitySrcGen.getGeneSrcCommonName() |
The common name of the natural organism from which the gene was
obtained.
|
StrColumn |
EntitySrcGen.getGeneSrcDetails() |
A description of special aspects of the natural organism from
which the gene was obtained.
|
StrColumn |
EntitySrcGen.getGeneSrcDevStage() |
A string to indicate the life-cycle or cell development
cycle in which the gene is expressed and the mature
protein is active.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getGeneSrcGene() |
Identifies the gene.
|
StrColumn |
EntitySrcGen.getGeneSrcGenus() |
The genus of the natural organism from which the gene was
obtained.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getGeneSrcScientificName() |
Scientific name of the organism.
|
StrColumn |
EntitySrcGen.getGeneSrcSpecies() |
The species of the natural organism from which the gene was
obtained.
|
StrColumn |
EntitySrcGen.getGeneSrcStrain() |
The strain of the natural organism from which the gene was
obtained, if relevant.
|
StrColumn |
EntitySrcGen.getGeneSrcTissue() |
The tissue of the natural organism from which the gene was
obtained.
|
StrColumn |
EntitySrcGen.getGeneSrcTissueFraction() |
The subcellular fraction of the tissue of the natural organism
from which the gene was obtained.
|
StrColumn |
EntitySrcNat.getGenus() |
The genus of the organism from which the entity was isolated.
|
StrColumn |
EmEntityAssembly.getGoId() |
The Gene Ontology (GO) identifier for the component.
|
StrColumn |
PdbxAuditSupport.getGrantNumber() |
The grant number associated with this source of support.
|
StrColumn |
EmSampleSupport.getGridMaterial() |
The name of the material from which the grid is made.
|
StrColumn |
EmSampleSupport.getGridType() |
A description of the grid type.
|
StrColumn |
PdbxAuditRevisionGroup.getGroup() |
The collection of categories updated with this revision.
|
StrColumn |
ReflnsScale.getGroupCode() |
The code identifying a scale _reflns_scale.meas_F,
_reflns_scale.meas_F_squared or _reflns_scale.meas_intensity.
|
StrColumn |
IhmDerivedAngleRestraint.getGroupConditionality() |
If a group of angles are restrained together, this data item defines
the conditionality based on which the restraint is applied in the modeling.
|
StrColumn |
IhmDerivedDihedralRestraint.getGroupConditionality() |
If a group of dihedrals are restrained together, this data item defines
the conditionality based on which the restraint is applied in the modeling.
|
StrColumn |
IhmDerivedDistanceRestraint.getGroupConditionality() |
If a group of atoms or residues are restrained, this data item defines
the conditionality based on which the restraint is applied in the modeling.
|
StrColumn |
IhmGeometricObjectDistanceRestraint.getGroupConditionality() |
If a group of atoms or residues are restrained, this data item defines
the conditionality based on which the restraint is applied in the modeling.
|
StrColumn |
PdbxDepositGroup.getGroupDescription() |
A description of the contents of entries in the collection.
|
StrColumn |
PdbxStructGroupList.getGroupEnumerationType() |
The manner in which the group is defined.
|
StrColumn |
PdbxDepositGroupIndex.getGroupFileName() |
A file name of the group of collected structures.
|
StrColumn |
PdbxDepositGroupIndex.getGroupFileTimestamp() |
A file timestamp of the group of collected structures.
|
StrColumn |
PdbxDepositGroup.getGroupId() |
A unique identifier for a group of entries deposited as a collection.
|
StrColumn |
PdbxDepositGroupIndex.getGroupId() |
A unique identifier for a group of entries deposited as a collection.
|
StrColumn |
PdbxTableinfo.getGroupName() |
SQL table group name..
|
StrColumn |
AtomSite.getGroupPDB() |
The group of atoms to which the atom site belongs.
|
StrColumn |
IhmStartingModelCoord.getGroupPDB() |
The group of atoms to which the atom site in the starting model belongs.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getGroupPDB() |
The PDB group of atoms to which the atom site belongs.
|
StrColumn |
PdbxDepositGroup.getGroupTitle() |
A title to describe the group of entries deposited in the collection.
|
StrColumn |
PdbxDepositGroup.getGroupType() |
Text to describe a grouping of entries in multiple collections
|
StrColumn |
PdbxPointSymmetry.getH_MNotation() |
The Hermann-Mauguin notation for this point symmetry group.
|
StrColumn |
PdbxPointSymmetryDepositorInfo.getH_MNotation() |
The Hermann-Mauguin notation for this point symmetry group.
|
StrColumn |
EmHelicalEntity.getHand() |
Handedness of the helix: right handed or left handed
|
StrColumn |
Software.getHardware() |
The hardware upon which the software was run.
|
StrColumn |
PdbxEntitySrcGenExpress.getHarvestingDetails() |
Details of the harvesting protocol.
|
StrColumn |
PdbxDepuiStatusFlags.getHasAcceptedTermsAndConditions() |
A flag to indicate the acceptance of wwPDB deposition and annotation terms and conditions.
|
StrColumn |
PdbxDepuiStatusFlags.getHasCyclicSymmetry() |
A flag to indicate that this entry has cyclic symmetry
|
StrColumn |
PdbxDepuiStatusFlags.getHasHelicalSymmetry() |
A flag to indicate that this entry has helical symmetry
|
StrColumn |
PdbxEntryDetails.getHasLigandOfInterest() |
A flag to indicate if author has indicated that there are any or no ligands
that are the focus of research.
|
StrColumn |
PdbxDepuiEntityStatusFlags.getHasMutation() |
A flag to indicate that the entity has a mutation.
|
StrColumn |
PdbxDepuiStatusFlags.getHasNcsData() |
A flag to indicate that the deposition includes NCS data.
|
StrColumn |
PdbxDepuiStatusFlags.getHasPointSymmetry() |
A flag to indicate that this entry has point symmetry
|
StrColumn |
PdbxDepuiStatusFlags.getHasSasData() |
A flag to indicate whether the author has related SAXS/SANS data.
|
StrColumn |
PdbxDepuiStatusFlags.getHasViewedValidationReport() |
A flag to indicate the viewing the latest validation report.
|
StrColumn |
EmAdmin.getHeaderReleaseDate() |
date of header information release for this entry
|
StrColumn |
EntityPolySeq.getHetero() |
A flag to indicate whether this monomer in the polymer is
heterogeneous in sequence.
|
StrColumn |
PdbxBranchScheme.getHetero() |
A flag to indicate whether this monomer in the entity is
heterogeneous in sequence.
|
StrColumn |
PdbxEntityBranchList.getHetero() |
A flag to indicate whether this monomer in the entity is
heterogeneous in sequence.
|
StrColumn |
PdbxPolySeqScheme.getHetero() |
Pointer to _entity_poly_seq.hetero
|
StrColumn |
PdbxReferenceEntityPolySeq.getHetero() |
A flag to indicate that sequence heterogeneity at this monomer position.
|
StrColumn |
PdbxConnect.getHetgroupChemicalName() |
Place-holder for PDB record HETNAM
|
StrColumn |
PdbxConnect.getHetgroupName() |
Place-holder for PDB record HET
|
StrColumn |
EmTomographySpecimen.getHighPressureFreezing() |
'YES' indicates that high pressure freezing was used in the specimen preparation
|
StrColumn |
PdbxDatabaseStatus.getHoldForPublication() |
At an author's request, an entry is to be held until
publication.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgCellLine() |
A specific line of cells used as the expression system
|
StrColumn |
EntitySrcGen.getHostOrgCommonName() |
The common name of the organism that served as host for the
production of the entity.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgCommonName() |
The common name of the organism that served as host for the
expression system.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgCultureCollection() |
Culture collection of the expression system
|
StrColumn |
EntitySrcGen.getHostOrgDetails() |
A description of special aspects of the organism that served as
host for the production of the entity.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgDetails() |
A description of special aspects of the organism that served as
host for the expression system.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getHostOrgGene() |
Specific gene which expressed the molecule.
|
StrColumn |
EntitySrcGen.getHostOrgGenus() |
The genus of the organism that served as host for the production
of the entity.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getHostOrgScientificName() |
The scientific name of the organism that served as host for the
production of the entity.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgScientificName() |
The scientific name of the organism that served as host for the
expression system.
|
StrColumn |
EntitySrcGen.getHostOrgSpecies() |
The species of the organism that served as host for the
production of the entity.
|
StrColumn |
EntitySrcGen.getHostOrgStrain() |
The strain of the organism in which the entity was expressed.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getHostOrgStrain() |
The strain of the organism in which the entity was
expressed.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgStrain() |
The strain of the organism that served as host for the expression
system.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgTaxId() |
The id for the NCBI taxonomy node corresponding to the organism that
served as host for the expression system.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgTissue() |
The specific tissue which expressed the molecule.
|
StrColumn |
PdbxEntitySrcGenExpress.getHostOrgVariant() |
The vairant of the organism that served as host for the expression
system.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getHostOrgVectorType() |
Identifies the type of vector used (plasmid, virus, or cosmid).
|
StrColumn |
PdbxCoord.getHydrogenAtomsYN() |
Gives information if the coordinates for hydrogen atoms
are available.
|
StrColumn |
NdbStructNaBasePair.getIAuthAsymId() |
Describes the asym id of the i-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getIAuthAsymId1() |
Describes the author's asym id of the i-th base in the first
base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getIAuthAsymId2() |
Describes the author's asym id of the i-th base in the second
base pair of the step.
|
StrColumn |
NdbStructNaBasePair.getIAuthSeqId() |
Describes the sequence number of the i-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getIAuthSeqId1() |
Describes the author's sequence number of the i-th base in the
first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getIAuthSeqId2() |
Describes the author's sequence number of the i-th base in the
second base pair of the step.
|
StrColumn |
PdbxDccDensity.getIceRing() |
Boolean whether ice ring exists (Y) or not (N) as determined
by Xtriage.
|
StrColumn |
EmVirusEntity.getIctvdbId() |
The International Committee on Taxonomy of Viruses
(ICTV) Taxon Identifier is the Virus Code used throughout the
ICTV database (ICTVdb).
|
StrColumn |
AtomSiteAnisotrop.getId() |
This data item is a pointer to _atom_site.id in the ATOM_SITE
category.
|
StrColumn |
AtomSitesAlt.getId() |
The value of _atom_sites_alt.id must uniquely identify
a record in the ATOM_SITES_ALT list.
|
StrColumn |
AtomSitesAltEns.getId() |
The value of _atom_sites_alt_ens.id must uniquely identify a
record in the ATOM_SITES_ALT_ENS list.
|
StrColumn |
AtomSitesFootnote.getId() |
A code that identifies the footnote.
|
StrColumn |
ChemComp.getId() |
The value of _chem_comp.id must uniquely identify each item in
the CHEM_COMP list.
|
StrColumn |
ChemCompChir.getId() |
The value of _chem_comp_chir.id must uniquely identify a record
in the CHEM_COMP_CHIR list.
|
StrColumn |
ChemCompPlane.getId() |
The value of _chem_comp_plane.id must uniquely identify a record
in the CHEM_COMP_PLANE list.
|
StrColumn |
ChemCompTor.getId() |
The value of _chem_comp_tor.id must uniquely identify a
record in the CHEM_COMP_TOR list.
|
StrColumn |
ChemLink.getId() |
The value of _chem_link.id must uniquely identify each
item in the CHEM_LINK list.
|
StrColumn |
ChemLinkChir.getId() |
The value of _chem_link_chir.id must uniquely identify a record
in the CHEM_LINK_CHIR list.
|
StrColumn |
ChemLinkPlane.getId() |
The value of _chem_link_plane.id must uniquely identify a record
in the CHEM_LINK_PLANE list.
|
StrColumn |
ChemLinkTor.getId() |
The value of _chem_link_tor.id must uniquely identify a
record in the CHEM_LINK_TOR list.
|
StrColumn |
Citation.getId() |
The value of _citation.id must uniquely identify a record in the
CITATION list.
|
StrColumn |
DatabasePDBTvect.getId() |
The value of _database_PDB_tvect.id must uniquely identify a
record in the DATABASE_PDB_TVECT list.
|
StrColumn |
Diffrn.getId() |
This data item uniquely identifies a set of diffraction
data.
|
StrColumn |
DiffrnRadiationWavelength.getId() |
The code identifying each value of
_diffrn_radiation_wavelength.wavelength.
|
StrColumn |
DiffrnRefln.getId() |
The value of _diffrn_refln.id must uniquely identify the
reflection in the data set identified by the item
_diffrn_refln.diffrn_id.
|
StrColumn |
Em2dCrystalEntity.getId() |
Unique key for the 2d_crystal_entity category.
|
StrColumn |
Em2dProjectionSelection.getId() |
unique identifier for each projection selection description
|
StrColumn |
Em3dCrystalEntity.getId() |
Unique key for the em_3d_crystal_entity category.
|
StrColumn |
Em3dFitting.getId() |
The value of _em_3d_fitting.id must uniquely identify
a fitting procedure of atomic coordinates
into 3dem reconstructed map volume.
|
StrColumn |
Em3dFittingList.getId() |
This data item is a unique identifier.
|
StrColumn |
Em3dReconstruction.getId() |
The value of _em_3d_reconstruction.id must
uniquely identify the 3d reconstruction.
|
StrColumn |
EmAssembly.getId() |
The value of _em_assembly.id must uniquely identify
a collection of observed complexes.
|
StrColumn |
EmBuffer.getId() |
The value of _em_buffer.id must
uniquely identify the sample buffer.
|
StrColumn |
EmBufferComponent.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmCrystalFormation.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmCtfCorrection.getId() |
Primary key
|
StrColumn |
EmDbReference.getId() |
The name of the database containing the related entry.
|
StrColumn |
EmDbReferenceAuxiliary.getId() |
Unique identifier for a provided link.
|
StrColumn |
EmDetector.getId() |
The value of _em_detector.id must uniquely identify
the detector used for imaging.
|
StrColumn |
EmDiffraction.getId() |
Primary key
|
StrColumn |
EmDiffractionShell.getId() |
Unique identifier for the category em_diffraction_shell
|
StrColumn |
EmDiffractionStats.getId() |
Identifier for this category
|
StrColumn |
EmEmbedding.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmEntityAssembly.getId() |
The value of _em_entity_assembly.id identifies
one component of the complex.
|
StrColumn |
EmEntityAssemblyMolwt.getId() |
Ordinal key for the em_entity_assembly_molwt category.
|
StrColumn |
EmEntityAssemblyNaturalsource.getId() |
Ordinal key for the em_entity_assembly_naturalsource category.
|
StrColumn |
EmEntityAssemblyRecombinant.getId() |
Ordinal identifier
|
StrColumn |
EmEulerAngleAssignment.getId() |
Primary key
|
StrColumn |
EmExperiment.getId() |
Placeholder ID.
|
StrColumn |
EmFiducialMarkers.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmFigureDepositorInfo.getId() |
This data item is the unique identifier for an image file.
|
StrColumn |
EmFinalClassification.getId() |
Primary key
|
StrColumn |
EmFocusedIonBeam.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmFscCurve.getId() |
This data item provides a unique identifier for each archived FSC curve.
|
StrColumn |
EmGridPretreatment.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmHelicalEntity.getId() |
The value of _em_helical_entity.id must uniquely identify
a set of the filament parameters for this assembly component.
|
StrColumn |
EmHighPressureFreezing.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmImageProcessing.getId() |
This data item provides a unique identifier for each data processing block.
|
StrColumn |
EmImageRecording.getId() |
The item _em_image_recording.id uniquely identifies
a set of recorded images.
|
StrColumn |
EmImageScans.getId() |
The value of _em_image_scans.id must uniquely identify
the images scanned.
|
StrColumn |
EmImaging.getId() |
The value of _em_imaging.id must uniquely identify
each imaging experiment.
|
StrColumn |
EmImagingOptics.getId() |
Primary key
|
StrColumn |
EmInterpretFigure.getId() |
This data item is the unique identifier for the image file.
|
StrColumn |
EmLayerLines.getId() |
This data item is the unique identifier for the layer line file.
|
StrColumn |
EmLayerLinesDepositorInfo.getId() |
This data item is the unique identifier for the layer line file.
|
StrColumn |
EmMapDepositorInfo.getId() |
Unique identifier for each map listed.
|
StrColumn |
EmMaskDepositorInfo.getId() |
Unique identifier for each map listed.
|
StrColumn |
EmObsolete.getId() |
Primary key
|
StrColumn |
EmParticleSelection.getId() |
Ordinal identifier
|
StrColumn |
EmSamplePreparation.getId() |
The value of _em_sample_preparation.id must
uniquely identify the sample preparation.
|
StrColumn |
EmSampleSupport.getId() |
The value of _em_sample_support.id must uniquely identify
the sample support.
|
StrColumn |
EmShadowing.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmSoftware.getId() |
Unique identifier for each software description.
|
StrColumn |
EmSpecimen.getId() |
The item _em_specimen.id uniquely identifies a specimen along with
its preparation methods.
|
StrColumn |
EmStaining.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmStartModel.getId() |
Primary key
|
StrColumn |
EmStructureFactors.getId() |
This data item is the unique identifier for the structure factor file.
|
StrColumn |
EmStructureFactorsDepositorInfo.getId() |
This data item is the unique identifier for the structure factor file.
|
StrColumn |
EmSupersede.getId() |
Primary key
|
StrColumn |
EmSupportFilm.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmTomography.getId() |
Primary key
|
StrColumn |
EmTomographySpecimen.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmUltramicrotomy.getId() |
This data item is the primary key of the category.
|
StrColumn |
EmVirusEntity.getId() |
Is the unique identifier for VIRUS_ENTITY category.
|
StrColumn |
EmVirusNaturalHost.getId() |
Unique identifier for the virus natural host.
|
StrColumn |
EmVirusShell.getId() |
The value of _em_em_virus_shell.id is a unique identifier for
one virus shell.
|
StrColumn |
EmVitrification.getId() |
The value of _em_vitrification.id must uniquely identify
the vitrification procedure.
|
StrColumn |
EmVolumeSelection.getId() |
Ordinal identifier
|
StrColumn |
Entity.getId() |
The value of _entity.id must uniquely identify a record in the
ENTITY list.
|
StrColumn |
Entry.getId() |
The value of _entry.id identifies the data block.
|
StrColumn |
EntryLink.getId() |
The value of _entry_link.id identifies a data block
related to the current data block.
|
StrColumn |
ExptlCrystal.getId() |
The value of _exptl_crystal.id must uniquely identify a record in
the EXPTL_CRYSTAL list.
|
StrColumn |
ExptlCrystalGrowComp.getId() |
The value of _exptl_crystal_grow_comp.id must uniquely identify
each item in the EXPTL_CRYSTAL_GROW_COMP list.
|
StrColumn |
PdbxAtomSiteAnisoTls.getId() |
This data item is a pointer to _atom_site.id in the ATOM_SITE
category.
|
StrColumn |
PdbxBuffer.getId() |
The value of _pdbx_buffer.id must
uniquely identify the sample buffer.
|
StrColumn |
PdbxBufferComponents.getId() |
The value of _pdbx_buffer_components.id must
uniquely identify a component of the buffer.
|
StrColumn |
PdbxChemCompModel.getId() |
The value of _pdbx_chem_comp_model.id must uniquely identify each
model instance the PDBX_CHEM_COMP_MODEL list.
|
StrColumn |
PdbxConstruct.getId() |
The value of _pdbx_construct.id must uniquely identify a record
in the PDBX_CONSTRUCT list and should be arranged so that it is
composed of a site-speicific prefix combined with a value that is
unique within a given site.Note that this item need not be a
number; it can be any unique identifier.
|
StrColumn |
PdbxConstructFeature.getId() |
The value of _pdbx_construct_feature.id must uniquely
identify a record in the PDBX_CONSTRUCT_FEATURE list.
|
StrColumn |
PdbxContactAuthor.getId() |
A unique integer identifier for this author
|
StrColumn |
PdbxDatabasePDBObsSpr.getId() |
Identifier for the type of obsolete entry to be added to this entry.
|
StrColumn |
PdbxDomain.getId() |
The value of _pdbx_domain.id must uniquely identify a
record in the PDBX_DOMAIN list.
|
StrColumn |
PdbxDrugInfo.getId() |
Serial number.
|
StrColumn |
PdbxEntityAssembly.getId() |
An identifier for the assembly.
|
StrColumn |
PdbxEntityFuncBindMode.getId() |
The value of _pdbx_entity_func_bind_mode.id is a unique identifier
for a binding mode within a domain within an entity.
|
StrColumn |
PdbxEntityNameTaxonomy.getId() |
This data item holds an node identifier in the
entity name taxonomy tree.
|
StrColumn |
PdbxEntityNameTaxonomyTree.getId() |
This data item identifies a node in the entity
name taxonomy.
|
StrColumn |
PdbxEntityPolyDomain.getId() |
The value of _pdbx_entity_poly_domain.id must uniquely identify a
domain within an entity.
|
StrColumn |
PdbxFamilyGroupIndex.getId() |
This data item is the identifier for the a group of related BIRD families.
|
StrColumn |
PdbxFeatureAssembly.getId() |
The value of _pdbx_feature_assembly.id uniquely identifies a
feature in the PDBX_FEATURE_ASSEMBLY category.
|
StrColumn |
PdbxFeatureDomain.getId() |
The value of _pdbx_feature_domain.id uniquely identifies
a feature in the PDBX_FEATURE_DOMAIN category.
|
StrColumn |
PdbxFeatureEntry.getId() |
The value of _pdbx_feature_entry.id uniquely identifies a
feature in the PDBX_FEATURE_ENTRY category.
|
StrColumn |
PdbxFeatureMonomer.getId() |
The value of _pdbx_feature_monomer.id uniquely identifies
a feature in the PDBX_FEATURE_MONOMER category.
|
StrColumn |
PdbxFeatureSequenceRange.getId() |
The value of _pdbx_feature_sequence_range.id uniquely identifies
a feature in the PDBX_FEATURE_SEQUENCE_RANGE category
|
StrColumn |
PdbxHybrid.getId() |
ID code.
|
StrColumn |
PdbxIonInfo.getId() |
Serial number.
|
StrColumn |
PdbxNaStrandInfo.getId() |
Serial number.
|
StrColumn |
PdbxNonstandardList.getId() |
The value of _pdbx_nonstandard_list.id must uniquely identify each item in
the PDBX_NONSTANDARD_LIST list.
|
StrColumn |
PdbxPdbCompnd.getId() |
NDB ID.
|
StrColumn |
PdbxPdbSource.getId() |
NDB ID.
|
StrColumn |
PdbxPhasingMADSet.getId() |
_pdbx_phasing_MAD_set.id records phase set name
for MAD phasing.
|
StrColumn |
PdbxPhasingMADSetShell.getId() |
_pdbx_phasing_MAD_set_shell.id records phase set name
for MAD phasing.
|
StrColumn |
PdbxPhasingMADSetSite.getId() |
_pdbx_phasing_MAD_set_site.id records the number of site
obtained from MAD phasing.
|
StrColumn |
PdbxProteinInfo.getId() |
Serial number.
|
StrColumn |
PdbxRefineTls.getId() |
The value of _pdbx_refine_tls.id must uniquely identify a record in
the PDBX_REFINE_TLS list.
|
StrColumn |
PdbxRefineTlsGroup.getId() |
The value of _pdbx_refine_tls_group.id must uniquely identify
a record in the REFINE_TLS_GROUP list for a particular refinement.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getId() |
The value of pdbx_remediation_atom_site_mapping.id must uniquely identify a record in
the PDBX_REMEDIATION_ATOM_SITE_MAPPING list.
|
StrColumn |
PdbxRobotSystem.getId() |
Assign a numerical ID to each instrument.
|
StrColumn |
PdbxSGProject.getId() |
A unique integer identifier for this center
|
StrColumn |
PdbxSolnScatter.getId() |
The value of _pdbx_soln_scatter.id must
uniquely identify the sample in the category PDBX_SOLN_SCATTER
|
StrColumn |
PdbxSolnScatterModel.getId() |
The value of _pdbx_soln_scatter_model.id must
uniquely identify the sample in the category PDBX_SOLN_SCATTER_MODEL
|
StrColumn |
PdbxSolventAtomSiteMapping.getId() |
The value of pdbx_solvent_atom_site_mapping.id must uniquely identify a record in
the PDBX_SOLVENT_ATOM_SITE_MAPPING list.
|
StrColumn |
PdbxSolventInfo.getId() |
Serial number.
|
StrColumn |
PdbxStructAssembly.getId() |
The value of _pdbx_struct_assembly.id must uniquely identify a record in
the PDBX_STRUCT_ASSEMBLY list.
|
StrColumn |
PdbxStructAssemblyAuthEvidence.getId() |
Identifies a unique record in pdbx_struct_assembly_auth_evidence.
|
StrColumn |
PdbxStructAssemblyAuthEvidenceDepositorInfo.getId() |
Identifies a unique record in pdbx_struct_assembly_auth_evidence_depositor_info.
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getId() |
The value of _pdbx_struct_assembly_depositor_info.id must uniquely identify a record in
the PDBX_STRUCT_ASSEMBLY_DEPOSITOR_INFO list.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getId() |
The value of _pdbx_struct_assembly_gen_depositor_info.id must
uniquely identify a record in the
PDBX_STRUCT_ASSEMBLY_GEN_DEPOSITOR_INFO list.
|
StrColumn |
PdbxStructBiolFunc.getId() |
A code which must uniquely identify each function assigned to
a biological assembly.
|
StrColumn |
PdbxStructConnAngle.getId() |
The value of _pdbx_struct_conn_angle.id must uniquely identify a record in
the PDBX_STRUCT_CONN_ANGLE list.
|
StrColumn |
PdbxStructEntityInst.getId() |
The value of _pdbx_struct_entity_inst.id must uniquely identify a record in
the PDBX_STRUCT_ENTITY_INST list.
|
StrColumn |
PdbxStructLink.getId() |
The value of _pdbx_struct_link.id must uniquely identify a record in
the PDBX_STRUCT_LINK list.
|
StrColumn |
PdbxStructNcsVirusGen.getId() |
Unique id for generator.
|
StrColumn |
PdbxStructOperList.getId() |
This identifier code must uniquely identify a
record in the PDBX_STRUCT_OPER_LIST list.
|
StrColumn |
PdbxStructOperListDepositorInfo.getId() |
This identifier code must uniquely identify a
record in the PDBX_STRUCT_OPER_LIST_DEPOSITOR_INFO list.
|
StrColumn |
PdbxStructPackGen.getId() |
Ordinal identifier
|
StrColumn |
PdbxStructRefSeqDeletion.getId() |
The value of _pdbx_struct_ref_seq_deletion.id must
uniquely identify a record in the PDBX_STRUCT_REF_SEQ_DELETION list.
|
StrColumn |
PdbxStructRefSeqInsertion.getId() |
The value of _pdbx_struct_ref_seq_insertion.id must
uniquely identify a record in the PDBX_STRUCT_REF_SEQ_INSERTION list.
|
StrColumn |
PdbxTrnaInfo.getId() |
Serial number.
|
StrColumn |
PhasingMADClust.getId() |
The value of _phasing_MAD_clust.id must, together with
_phasing_MAD_clust.expt_id, uniquely identify a record in the
PHASING_MAD_CLUST list.
|
StrColumn |
PhasingMADExpt.getId() |
The value of _phasing_MAD_expt.id must uniquely identify each
record in the PHASING_MAD_EXPT list.
|
StrColumn |
PhasingMIRDer.getId() |
The value of _phasing_MIR_der.id must uniquely identify
a record in the PHASING_MIR_DER list.
|
StrColumn |
PhasingMIRDerSite.getId() |
The value of _phasing_MIR_der_site.id must uniquely identify each
site in each derivative in the PHASING_MIR_DER_SITE list.
|
StrColumn |
PhasingSet.getId() |
The value of _phasing_set.id must uniquely identify
a record in the PHASING_SET list.
|
StrColumn |
SpaceGroup.getId() |
This is the unique identifier for the SPACE_GROUP category.
|
StrColumn |
SpaceGroupSymop.getId() |
An arbitrary identifier that uniquely labels each symmetry
operation in the list.
|
StrColumn |
StructAsym.getId() |
The value of _struct_asym.id must uniquely identify a record in
the STRUCT_ASYM list.
|
StrColumn |
StructBiol.getId() |
The value of _struct_biol.id must uniquely identify a record in
the STRUCT_BIOL list.
|
StrColumn |
StructBiolView.getId() |
The value of _struct_biol_view.id must uniquely identify a
record in the STRUCT_BIOL_VIEW list.
|
StrColumn |
StructConf.getId() |
The value of _struct_conf.id must uniquely identify a record in
the STRUCT_CONF list.
|
StrColumn |
StructConfType.getId() |
The descriptor that categorizes the type of the conformation
of the backbone of the polymer (whether protein or nucleic acid).
|
StrColumn |
StructConn.getId() |
The value of _struct_conn.id must uniquely identify a record in
the STRUCT_CONN list.
|
StrColumn |
StructConnType.getId() |
The chemical or structural type of the interaction.
|
StrColumn |
StructNcsDom.getId() |
The value of _struct_ncs_dom.id must uniquely identify a
record in the STRUCT_NCS_DOM list.
|
StrColumn |
StructNcsEns.getId() |
The value of _struct_ncs_ens.id must uniquely identify a
record in the STRUCT_NCS_ENS list.
|
StrColumn |
StructNcsOper.getId() |
The value of _struct_ncs_oper.id must uniquely identify a
record in the STRUCT_NCS_OPER list.
|
StrColumn |
StructRef.getId() |
The value of _struct_ref.id must uniquely identify a record
in the STRUCT_REF list.
|
StrColumn |
StructSheet.getId() |
The value of _struct_sheet.id must uniquely identify a record in
the STRUCT_SHEET list.
|
StrColumn |
StructSheetRange.getId() |
The value of _struct_sheet_range.id must uniquely identify a
range in a given sheet in the STRUCT_SHEET_RANGE list.
|
StrColumn |
StructSite.getId() |
The value of _struct_site.id must uniquely identify a record in
the STRUCT_SITE list.
|
StrColumn |
StructSiteGen.getId() |
The value of _struct_site_gen.id must uniquely identify a record
in the STRUCT_SITE_GEN list.
|
StrColumn |
StructSiteView.getId() |
The value of _struct_site_view.id must uniquely identify a
record in the STRUCT_SITE_VIEW list.
|
StrColumn |
SymmetryEquiv.getId() |
The value of _symmetry_equiv.id must uniquely identify
a record in the SYMMETRY_EQUIV category.
|
StrColumn |
ValenceParam.getId() |
An identifier for the valence parameters of a bond between
the given atoms.
|
StrColumn |
ValenceRef.getId() |
An identifier for items in this category.
|
StrColumn |
PdbxChemCompIdentifier.getIdentifier() |
This data item contains the identifier value for this
component.
|
StrColumn |
AuditAuthor.getIdentifierORCID() |
The Open Researcher and Contributor ID (ORCID).
|
StrColumn |
CitationAuthor.getIdentifierORCID() |
The Open Researcher and Contributor ID (ORCID).
|
StrColumn |
PdbxContactAuthor.getIdentifierORCID() |
The Open Researcher and Contributor ID (ORCID).
|
StrColumn |
PublAuthor.getIdIucr() |
Identifier in the IUCr contact database of a publication
author.
|
StrColumn |
NdbStructNaBasePair.getILabelAsymId() |
Describes the asym id of the i-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getILabelAsymId1() |
Describes the asym id of the i-th base in the first base pair
of the step.
|
StrColumn |
NdbStructNaBasePairStep.getILabelAsymId2() |
Describes the asym id of the i-th base in the second base pair
of the step.
|
StrColumn |
NdbStructNaBasePair.getILabelCompId() |
Describes the component id of the i-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getILabelCompId1() |
Describes the component id of the i-th base in the first base pair
of the step.
|
StrColumn |
NdbStructNaBasePairStep.getILabelCompId2() |
Describes the component id of the i-th base in the second base pair
of the step.
|
StrColumn |
EmImaging.getIlluminationMode() |
The mode of illumination.
|
StrColumn |
Em2dCrystalEntity.getImageProcessingId() |
pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.
|
StrColumn |
Em3dCrystalEntity.getImageProcessingId() |
pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.
|
StrColumn |
Em3dReconstruction.getImageProcessingId() |
Foreign key to the EM_IMAGE_PROCESSING category
|
StrColumn |
EmDiffractionStats.getImageProcessingId() |
Pointer to _em_image_processing.id
|
StrColumn |
EmEulerAngleAssignment.getImageProcessingId() |
Foreign key to the EM_IMAGE_PROCESSING category
|
StrColumn |
EmFinalClassification.getImageProcessingId() |
Foreign key to the EM_IMAGE_PROCESSING category
|
StrColumn |
EmHelicalEntity.getImageProcessingId() |
The value of _em_helical_entity.reconstruction_id identifies a particular reconstruction.
|
StrColumn |
EmParticleSelection.getImageProcessingId() |
The value of _em_particle_selection.image_processing_id points to
the EM_IMAGE_PROCESSING category.
|
StrColumn |
EmSingleParticleEntity.getImageProcessingId() |
pointer to _em_image_processing.id.
|
StrColumn |
EmSoftware.getImageProcessingId() |
pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.
|
StrColumn |
EmStartModel.getImageProcessingId() |
Foreign key to the EM_IMAGE_PROCESSING category
|
StrColumn |
EmVolumeSelection.getImageProcessingId() |
The value of _em_volume_selection.image_processing_id points to
the EM_IMAGE_PROCESSING category.
|
StrColumn |
EmImageProcessing.getImageRecordingId() |
Foreign key to the EM_IMAGE_RECORDING
|
StrColumn |
EmImageScans.getImageRecordingId() |
foreign key linked to _em_image_recording
|
StrColumn |
Ihm2demClassAverageRestraint.getImageSegmentFlag() |
A flag that indicates whether or not the 2DEM class average image is segmented i.e.,
whether the whole image is used or only a portion of it is used (by masking
or by other means) as restraint in the modeling.
|
StrColumn |
EmDiffraction.getImagingId() |
Foreign key to the EM_IMAGING category
|
StrColumn |
EmImageRecording.getImagingId() |
This data item the id of the microscopy settings used in the imaging.
|
StrColumn |
EmImagingOptics.getImagingId() |
Foreign key to the EM IMAGING category
|
StrColumn |
EmSoftware.getImagingId() |
pointer to _em_imaging.id in the EM_IMAGING category.
|
StrColumn |
EmTomography.getImagingId() |
Foreign key to the EM IMAGING category
|
StrColumn |
IhmChemicalComponentDescriptor.getInchi() |
The IUPAC INCHI descriptor of the component.
|
StrColumn |
IhmChemicalComponentDescriptor.getInchiKey() |
The hashed INCHI key of the component.
|
StrColumn |
Refln.getIncludeStatus() |
Classification of a reflection so as to indicate its status with
respect to inclusion in the refinement and the calculation of
R factors.
|
StrColumn |
PdbxChemCompDepositorInfo.getInDictionaryFlag() |
A flag to indicate if the chemical component is defined in the chemical component dictionary.
|
StrColumn |
PdbxEntitySrcGenExpress.getInducer() |
The chemical name of the inducing agent.
|
StrColumn |
PdbxEntitySrcGenExpress.getInductionDetails() |
Details of induction/transformation/transfection.
|
StrColumn |
PdbxSGProject.getInitialOfCenter() |
The value identifies the full name of center.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getInjectorNozzle() |
The type of nozzle to deliver and focus sample jet
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getInPolymerFlag() |
A flag to indicate if the chemical component instance is a part of a polymer molecule.
|
StrColumn |
PdbxNonstandardList.getInsCode() |
Insertion code of het group.
|
StrColumn |
PdbxReferenceEntityPolyLink.getInsertCode1() |
The residue insertion code for the first of the two components making
the non-standard linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getInsertCode2() |
The residue insertion code for the second of the two components making
the non-standard linkage.
|
StrColumn |
EmStartModel.getInsilicoModel() |
Description of the "in silico" model used to generate the startup model
|
StrColumn |
EmCrystalFormation.getInstrument() |
Instrument used to prepare the crystalline array
|
StrColumn |
EmFocusedIonBeam.getInstrument() |
The instrument used for focused ion beam sectioning
|
StrColumn |
EmHighPressureFreezing.getInstrument() |
The instrument used for high pressure freezing.
|
StrColumn |
EmUltramicrotomy.getInstrument() |
Ultramicrotome instrument used for sectioning
|
StrColumn |
EmVitrification.getInstrument() |
The type of instrument used in the vitrification process.
|
StrColumn |
IhmPolyResidueFeature.getInterfaceResidueFlag() |
A flag to indicate if the feature is an interface residue, identified by experiments and
therefore, used to build spatial restraints during modeling.
|
StrColumn |
PdbxAuditRevisionHistory.getInternalDepositionId() |
The deposition id that corresponds to this millestone file
|
StrColumn |
EmFocusedIonBeam.getIon() |
The ion source used to ablate the specimen
|
StrColumn |
PdbxNmrExptlSampleConditions.getIonicStrength() |
The ionic strength at which the NMR data were collected -in lieu of
this enter the concentration and identity of the salt in the sample.
|
StrColumn |
PdbxNmrExptlSampleConditions.getIonicStrengthUnits() |
Units for the value of the sample condition ionic strength..
|
StrColumn |
NdbStructNaBasePair.getIPDBInsCode() |
Describes the PDB insertion code of the i-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getIPDBInsCode1() |
Describes the PDB insertion code of the i-th base in the
first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getIPDBInsCode2() |
Describes the PDB insertion code of the i-th base in the
second base pair of the step.
|
StrColumn |
EmEntityAssembly.getIprId() |
The InterPro (IPR) identifier for the component.
|
StrColumn |
PdbxDepuiStatusFlags.getIsGrantFunded() |
A flag to indicate that the deposition was grant funded.
|
StrColumn |
PdbxDepuiStatusFlags.getIsLigandProcessingComplete() |
A flag to indicate that ligand processing is complete
|
StrColumn |
PdbxDccDensity.getIsoBValueType() |
The type of B factors (partial or full) for the residue.
|
StrColumn |
PdbxBufferComponents.getIsotopicLabeling() |
The isotopic composition of each component, including
the % labeling level, if known.
|
StrColumn |
PdbxNmrExptlSample.getIsotopicLabeling() |
The isotopic composition of each component, including
the % labeling level, if known.
|
StrColumn |
PdbxDepuiStatusFlags.getIsSasDeposited() |
A flag to indicate whether related SAXS/SANS data is already deposited elsewhere
|
StrColumn |
PdbxReferencePublicationList.getISSNCodeType() |
The International Standard Serial Number (ISSN/ISBN/ESSN) code type.
|
StrColumn |
PdbxReferencePublicationList.getISSNCodeValue() |
The International Standard Serial Number (ISSN) code value.
|
StrColumn |
Journal.getIssue() |
Journal data items are defined by the journal staff.
|
StrColumn |
NdbStructNaBasePair.getISymmetry() |
Describes the symmetry operation that should be applied to the
coordinates of the i-th base to generate the first partner
in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getISymmetry1() |
Describes the symmetry operation that should be applied to the
coordinates of the i-th base to generate the first partner
in the first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getISymmetry2() |
Describes the symmetry operation that should be applied to the
coordinates of the i-th base to generate the first partner
in the second base pair of the step.
|
StrColumn |
PdbxAuditRevisionItem.getItem() |
A high level explanation the author has provided for submitting a revision.
|
StrColumn |
PdbxViewItem.getItemName() |
The mmCIF item name.
|
StrColumn |
PdbxViewItem.getItemViewAllowAlternateValue() |
A code to indicate if the view should permit alternatives
to enumerated item values.
|
StrColumn |
PdbxViewItem.getItemViewMandatoryCode() |
A code to indicate the role of the data item in the view.
|
StrColumn |
PdbxViewItem.getItemViewName() |
An alias name for the mmCIF item in this view.
|
StrColumn |
PdbxNmrComputing.getIterativeRelaxationMatrix() |
Enter the name of the software used for iterative relaxation matrix methods.
|
StrColumn |
PdbxNmrComputing.getIterativeRelaxationMatrixVersion() |
Enter the version of the software used for iterative relaxation matrix methods.
|
StrColumn |
ChemicalFormula.getIupac() |
Formula expressed in conformance with IUPAC rules for inorganic
and metal-organic compounds where these conflict with the rules
for any other CHEMICAL_FORMULA entries.
|
StrColumn |
NdbStructNaBasePair.getJAuthAsymId() |
Describes the asym id of the j-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJAuthAsymId1() |
Describes the author's asym id of the j-th base in the first
base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJAuthAsymId2() |
Describes the author's asym id of the j-th base in the second
base pair of the step.
|
StrColumn |
NdbStructNaBasePair.getJAuthSeqId() |
Describes the sequence number of the j-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJAuthSeqId1() |
Describes the author's sequence number of the j-th base in the
first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJAuthSeqId2() |
Describes the author's sequence number of the j-th base in the
second base pair of the step.
|
StrColumn |
NdbStructNaBasePair.getJLabelAsymId() |
Describes the asym id of the j-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJLabelAsymId1() |
Describes the asym id of the j-th base in the first base pair
of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJLabelAsymId2() |
Describes the asym id of the j-th base in the second base pair
of the step.
|
StrColumn |
NdbStructNaBasePair.getJLabelCompId() |
Describes the component id of the j-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJLabelCompId1() |
Describes the component id of the j-th base in the first base pair
of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJLabelCompId2() |
Describes the component id of the j-th base in the second base pair
of the step.
|
StrColumn |
Citation.getJournalAbbrev() |
Abbreviated name of the cited journal as given in the
Chemical Abstracts Service Source Index.
|
StrColumn |
Database.getJournalASTM() |
The ASTM CODEN designator for a journal as given in the Chemical
Source List maintained by the Chemical Abstracts Service.
|
StrColumn |
Database.getJournalCSD() |
The journal code used in the Cambridge Structural Database.
|
StrColumn |
Citation.getJournalFull() |
Full name of the cited journal; relevant for journal articles.
|
StrColumn |
Citation.getJournalIdASTM() |
The American Society for Testing and Materials (ASTM) code
assigned to the journal cited (also referred to as the CODEN
designator of the Chemical Abstracts Service); relevant for
journal articles.
|
StrColumn |
Citation.getJournalIdCSD() |
The Cambridge Structural Database (CSD) code assigned to the
journal cited; relevant for journal articles.
|
StrColumn |
Citation.getJournalIdISSN() |
The International Standard Serial Number (ISSN) code assigned to
the journal cited; relevant for journal articles.
|
StrColumn |
Citation.getJournalIssue() |
Issue number of the journal cited; relevant for journal
articles.
|
StrColumn |
Citation.getJournalVolume() |
Volume number of the journal cited; relevant for journal
articles.
|
StrColumn |
NdbStructNaBasePair.getJPDBInsCode() |
Describes the PDB insertion code of the j-th base in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJPDBInsCode1() |
Describes the PDB insertion code of the j-th base in the
first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJPDBInsCode2() |
Describes the PDB insertion code of the j-th base in the
second base pair of the step.
|
StrColumn |
NdbStructNaBasePair.getJSymmetry() |
Describes the symmetry operation that should be applied to the
coordinates of the j-th base to generate the second partner
in the base pair.
|
StrColumn |
NdbStructNaBasePairStep.getJSymmetry1() |
Describes the symmetry operation that should be applied to the
coordinates of the j-th base to generate the second partner
in the first base pair of the step.
|
StrColumn |
NdbStructNaBasePairStep.getJSymmetry2() |
Describes the symmetry operation that should be applied to the
coordinates of the j-th base to generate the second partner
in the second base pair of the step.
|
StrColumn |
EmMap.getLabel() |
text stored in the label field of the CCP4 map header
(WORDS 57-256)
|
StrColumn |
PdbxNmrAssignedChemShiftList.getLabel() |
A descriptive label that uniquely identifies a list of reported assigned chemical shifts.
|
StrColumn |
PdbxNmrChemShiftReference.getLabel() |
A descriptive label that uniquely identifies this list of chemical shift
referencing parameters used in reporting assigned chemical shifts and other chemical
shift data.
|
StrColumn |
PdbxNmrExptlSampleConditions.getLabel() |
A descriptive label that uniquely identifies this set of sample conditions.
|
StrColumn |
PdbxNmrSampleDetails.getLabel() |
A value that uniquely identifies this sample from the other samples listed
in the entry.
|
StrColumn |
PdbxNmrSpectralPeakList.getLabel() |
A descriptive label that uniquely identifies a list of reported spectral peaks.
|
StrColumn |
PublBody.getLabel() |
Code identifying the section of text.
|
StrColumn |
AtomSite.getLabelAltId() |
A place holder to indicate alternate conformation.
|
StrColumn |
PdbxAtomSiteAnisoTls.getLabelAltId() |
This data item is a pointer to _atom_sites_alt.id in the
ATOM_SITE category.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getLabelAltId() |
An element of the chemical component instance identifier.
|
StrColumn |
PdbxDccMap.getLabelAltId() |
Author provided alternate location identifier.
|
StrColumn |
PdbxDccRsccMapman.getLabelAltId() |
The author provided alternate location identifier.
|
StrColumn |
PdbxDistantSolventAtoms.getLabelAltId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxFeatureMonomer.getLabelAltId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxRefineComponent.getLabelAltId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getLabelAltId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getLabelAltId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getLabelAltId() |
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxStructGroupComponents.getLabelAltId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructSpecialSymmetry.getLabelAltId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getLabelAltId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxValidateChiral.getLabelAltId() |
Part of the identifier of the residue
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateMainChainPlane.getLabelAltId() |
Optional identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanes.getLabelAltId() |
Optional identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateTorsion.getLabelAltId() |
Optional identifier of the residue
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
StructMonNucl.getLabelAltId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getLabelAltId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getLabelAltId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getLabelAltId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getLabelAltId1() |
A component of the identifier for partner 1 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAltId1() |
A component of the identifier for partner 1 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAltId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getLabelAltId1() |
An optional identifier of the first of the two atoms that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getLabelAltId1() |
Optional identifier of the first residue in the torsion angle
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getLabelAltId1() |
An optional identifier of the first of the two atoms that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getLabelAltId1() |
An optional identifier of the first of the three atoms that
define the covalent angle.
|
StrColumn |
PdbxValidateRmsdBond.getLabelAltId1() |
An optional identifier of the first of the two atoms that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getLabelAltId1() |
An optional identifier of the first of the two atoms that
define the close contact.
|
StrColumn |
PdbxValSymContact.getLabelAltId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAltId2() |
A component of the identifier for partner 2 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAltId2() |
A component of the identifier for partner 2 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAltId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValidateCloseContact.getLabelAltId2() |
An optional identifier of the second of the two atoms that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getLabelAltId2() |
Optional identifier of the second residue in the torsion angle
This data item is a pointer to _atom_site.label_alt_id in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getLabelAltId2() |
An optional identifier of the second of the two atoms that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getLabelAltId2() |
An optional identifier of the second of the three atoms that
define the covalent angle.
|
StrColumn |
PdbxValidateRmsdBond.getLabelAltId2() |
An optional identifier of the second of the two atoms that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getLabelAltId2() |
An optional identifier of the second of the two atoms that
define the close contact.
|
StrColumn |
PdbxValSymContact.getLabelAltId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAltId3() |
A component of the identifier for partner 3 of the angle
connection.
|
StrColumn |
PdbxValidateRmsdAngle.getLabelAltId3() |
An optional identifier of the third of the three atoms that
define the covalent angle.
|
StrColumn |
PdbxStereochemistry.getLabelAltIdU() |
Alt_id for stereochemically related atom U.
|
StrColumn |
PdbxStereochemistry.getLabelAltIdV() |
Alt_id for stereochemically related atom V.
|
StrColumn |
PdbxStereochemistry.getLabelAltIdW() |
Alt_id for stereochemically related atom W.
|
StrColumn |
AtomSite.getLabelAsymId() |
A component of the identifier for this atom site.
|
StrColumn |
PdbxAtomSiteAnisoTls.getLabelAsymId() |
This data item is a pointer to _atom_site.label_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxDistantSolventAtoms.getLabelAsymId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxFeatureMonomer.getLabelAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxMissingAtomNonpoly.getLabelAsymId() |
Identifier of the residue.
|
StrColumn |
PdbxMissingAtomPoly.getLabelAsymId() |
Identifier of the residue.
|
StrColumn |
PdbxNonstandardList.getLabelAsymId() |
Chain ID of het group.
|
StrColumn |
PdbxRefineComponent.getLabelAsymId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getLabelAsymId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxRmchOutlier.getLabelAsymId() |
Identifier of the residue.
|
StrColumn |
PdbxRmsDevsCovByMonomer.getLabelAsymId() |
This data item is a pointer to _atom_site.label_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxSequencePattern.getLabelAsymId() |
The identifier of the asym_id of the strand containing
the sequence pattern.
|
StrColumn |
PdbxSolventAtomSiteMapping.getLabelAsymId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getLabelAsymId() |
This data item is a pointer to _atom_site.label_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxStructGroupComponents.getLabelAsymId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructModResidue.getLabelAsymId() |
Part of the identifier for the modified polymer component.
|
StrColumn |
PdbxStructSpecialSymmetry.getLabelAsymId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxSugarPhosphateGeometry.getLabelAsymId() |
This data item is a pointer to _atom_site.label_asym_id in the
ATOM_SITE category.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getLabelAsymId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getLabelAsymId() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValChiral.getLabelAsymId() |
Identifier of the residue.
|
StrColumn |
StructMonNucl.getLabelAsymId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getLabelAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getLabelAsymId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getLabelAsymId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getLabelAsymId1() |
A component of the identifier for partner 1 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAsymId1() |
A component of the identifier for partner 1 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAsymId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelAsymId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAsymId2() |
A component of the identifier for partner 2 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAsymId2() |
A component of the identifier for partner 2 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAsymId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelAsymId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAsymId3() |
A component of the identifier for partner 3 of the angle
connection.
|
StrColumn |
AtomSite.getLabelAtomId() |
A component of the identifier for this atom site.
|
StrColumn |
PdbxAtomSiteAnisoTls.getLabelAtomId() |
This data item is a pointer to _atom_site.label_atom_id in the
ATOM_SITE category.
|
StrColumn |
PdbxDistantSolventAtoms.getLabelAtomId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getLabelAtomId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getLabelAtomId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getLabelAtomId() |
This data item is a pointer to _atom_site.label_atom_id in the
ATOM_SITE category.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getLabelAtomId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
StructSiteGen.getLabelAtomId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getLabelAtomId1() |
A component of the identifier for partner 1 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAtomId1() |
A component of the identifier for partner 1 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAtomId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelAtomId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAtomId2() |
A component of the identifier for partner 2 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelAtomId2() |
A component of the identifier for partner 2 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelAtomId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelAtomId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelAtomId3() |
A component of the identifier for partner 3 of the angle
connection.
|
StrColumn |
PdbxStereochemistry.getLabelAtomIdU() |
Stereochemically related atom U.
|
StrColumn |
PdbxStereochemistry.getLabelAtomIdV() |
Stereochemically related atom V.
|
StrColumn |
PdbxStereochemistry.getLabelAtomIdW() |
Stereochemically related atom W.
|
StrColumn |
AtomSite.getLabelCompId() |
A component of the identifier for this atom site.
|
StrColumn |
PdbxAtomSiteAnisoTls.getLabelCompId() |
This data item is a pointer to _atom_site.label_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxDistantSolventAtoms.getLabelCompId() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxFeatureMonomer.getLabelCompId() |
A component of the identifier for the monomer.
|
StrColumn |
PdbxMissingAtomNonpoly.getLabelCompId() |
Identifier of the residue.
|
StrColumn |
PdbxMissingAtomPoly.getLabelCompId() |
Identifier of the residue.
|
StrColumn |
PdbxRefineComponent.getLabelCompId() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getLabelCompId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxRmchOutlier.getLabelCompId() |
Identifier of the residue.
|
StrColumn |
PdbxRmsDevsCovByMonomer.getLabelCompId() |
This data item is a pointer to _atom_site.label_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxSolventAtomSiteMapping.getLabelCompId() |
A component of the atom_site identifier.
|
StrColumn |
PdbxStereochemistry.getLabelCompId() |
This data item is a pointer to _atom_site.label_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxStructGroupComponents.getLabelCompId() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructModResidue.getLabelCompId() |
Part of the identifier for the modified polymer component.
|
StrColumn |
PdbxStructSpecialSymmetry.getLabelCompId() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxSugarPhosphateGeometry.getLabelCompId() |
This data item is a pointer to _atom_site.label_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getLabelCompId() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getLabelCompId() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValChiral.getLabelCompId() |
Identifier of the residue.
|
StrColumn |
StructMonNucl.getLabelCompId() |
A component of the identifier for participants in the site.
|
StrColumn |
StructMonProt.getLabelCompId() |
A component of the identifier for the monomer.
|
StrColumn |
StructMonProtCis.getLabelCompId() |
A component of the identifier for the monomer.
|
StrColumn |
StructSiteGen.getLabelCompId() |
A component of the identifier for participants in the site.
|
StrColumn |
PdbxValAngle.getLabelCompId1() |
A component of the identifier for partner 1 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelCompId1() |
A component of the identifier for partner 1 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelCompId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelCompId1() |
A component of the identifier for partner 1 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelCompId2() |
A component of the identifier for partner 2 of the angle
connection.
|
StrColumn |
PdbxValBond.getLabelCompId2() |
A component of the identifier for partner 2 of the bond
connection.
|
StrColumn |
PdbxValContact.getLabelCompId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValSymContact.getLabelCompId2() |
A component of the identifier for partner 2 of the close
contact.
|
StrColumn |
PdbxValAngle.getLabelCompId3() |
A component of the identifier for partner 3 of the angle
connection.
|
StrColumn |
AtomSite.getLabelEntityId() |
This data item is a pointer to _entity.id in the ENTITY category.
|
StrColumn |
PdbxDccMap.getLabelInsCode() |
The PDB insertion code.
|
StrColumn |
PdbxDccRsccMapman.getLabelInsCode() |
PDB insertion code.
|
StrColumn |
PdbxNonstandardList.getLabelSeqNum() |
Residue number of het group.
|
StrColumn |
Citation.getLanguage() |
Language in which the cited article is written.
|
StrColumn |
Journal.getLanguage() |
Journal data items are defined by the journal staff.
|
StrColumn |
Software.getLanguage() |
The major computing language in which the software is
coded.
|
StrColumn |
EmAdmin.getLastUpdate() |
date of last update to the file
|
StrColumn |
PdbxEntityBranchLink.getLeavingAtomId1() |
The leaving atom identifier/name bonded to the first atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getLeavingAtomId1() |
The leaving atom identifier/name bonded to the first atom making the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getLeavingAtomId1() |
The leaving atom identifier/name bonded to the first atom making the linkage.
|
StrColumn |
PdbxEntityBranchLink.getLeavingAtomId2() |
The leaving atom identifier/name bonded to the second atom making the linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getLeavingAtomId2() |
The leaving atom identifier/name bonded to the second atom making the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getLeavingAtomId2() |
The leaving atom identifier/name bonded to the second atom making the linkage.
|
StrColumn |
PdbxContactAuthor.getLegacyAddress() |
The mailing address of the author of the data block to whom
correspondence should be addressed transfered from
_audit_contact_author.address
|
StrColumn |
PdbxEntitySrcGenCloneLigation.getLigationEnzymes() |
The names of the enzymes used to ligate the gene into the cleaved vector.
|
StrColumn |
EmDbReferenceAuxiliary.getLink() |
Hyperlink to the auxiliary data.
|
StrColumn |
PdbxLinkedEntityLinkList.getLinkClass() |
A code indicating the entity types involved in the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getLinkClass() |
A code indicating the entity types involved in the linkage.
|
StrColumn |
PdbxLinkedEntity.getLinkedEntityId() |
The value of _pdbx_linked_entity.linked_entity_id is the unique identifier
for the molecule represented as a collection of linked entities.
|
StrColumn |
PdbxLinkedEntityInstanceList.getLinkedEntityId() |
The value of _pdbx_linked_entity_instance_list.linked_entity_id is a reference to the
identifier for a molecule represented as a linked entity.
|
StrColumn |
PdbxLinkedEntityLinkList.getLinkedEntityId() |
The value of _pdbx_linked_entity_link_list.linked_entity_id is a reference
_pdbx_linked_entity_list.linked_entity_id in the PDBX_LINKED_ENTITY_LIST category.
|
StrColumn |
PdbxLinkedEntityList.getLinkedEntityId() |
The value of _pdbx_linked_entity_list.linked_entity_id is a reference
_pdbx_linked_entity.linked_entity_id in the PDBX_LINKED_ENTITY category.
|
StrColumn |
PdbxMolecule.getLinkedEntityId() |
A reference to _pdbx_linked_entity.linked_entity_id in the PDBX_LINKED_ENTITY category.
|
StrColumn |
PdbxValidateRmsdAngle.getLinkerFlag() |
A flag to indicate if the angle is between two residues
|
StrColumn |
PdbxValidateRmsdBond.getLinkerFlag() |
A flag to indicate if the bond is between two residues
|
StrColumn |
IhmCrossLinkList.getLinkerType() |
The type of crosslinker used.
|
StrColumn |
PdbxReferenceLinkedEntity.getLinkFromEntityType() |
The polymer linking type of the second partner entity in example linkage.
|
StrColumn |
ChemCompLink.getLinkId() |
This data item is a pointer to _chem_link.id in the
CHEM_LINK category.
|
StrColumn |
ChemLinkAngle.getLinkId() |
This data item is a pointer to _chem_link.id in the CHEM_LINK
category.
|
StrColumn |
ChemLinkBond.getLinkId() |
This data item is a pointer to _chem_link.id in the CHEM_LINK
category.
|
StrColumn |
ChemLinkChir.getLinkId() |
This data item is a pointer to _chem_link.id in the CHEM_LINK
category.
|
StrColumn |
ChemLinkPlane.getLinkId() |
This data item is a pointer to _chem_link.id in the CHEM_LINK
category.
|
StrColumn |
ChemLinkTor.getLinkId() |
This data item is a pointer to _chem_link.id in the CHEM_LINK
category.
|
StrColumn |
EntityLink.getLinkId() |
This data item is a pointer to _chem_link.id in the
CHEM_LINK category.
|
StrColumn |
PdbxReferenceLinkedEntity.getLinkToCompId() |
The component identifer for the component in the first partner of the example linkage.
|
StrColumn |
PdbxReferenceLinkedEntity.getLinkToEntityType() |
The polymer linking type of the first partner entity in example linkage.
|
StrColumn |
EmDbReferenceAuxiliary.getLinkType() |
Type of auxiliary data stored at the indicated link.
|
StrColumn |
EmCrystalFormation.getLipidMixture() |
Description of the lipid mixture used for crystallization
|
StrColumn |
Software.getLocation() |
The URL for an Internet address at which
details of the software can be found.
|
StrColumn |
Refine.getLsAbsStructureDetails() |
The nature of the absolute structure and how it was determined.
|
StrColumn |
Refine.getLsExtinctionExpression() |
A description of or reference to the extinction-correction
equation used to apply the data item
_refine.ls_extinction_coef.
|
StrColumn |
Refine.getLsExtinctionMethod() |
A description of the extinction-correction method applied.
|
StrColumn |
Refine.getLsHydrogenTreatment() |
Treatment of hydrogen atoms in the least-squares refinement.
|
StrColumn |
Refine.getLsMatrixType() |
Type of matrix used to accumulate the least-squares derivatives.
|
StrColumn |
Refine.getLsRFactorRFreeErrorDetails() |
Special aspects of the method used to estimated the error in
_refine.ls_R_factor_R_free.
|
StrColumn |
Refine.getLsStructureFactorCoef() |
Structure-factor coefficient |F|, F^2^ or I used in the least-
squares refinement process.
|
StrColumn |
Refine.getLsWeightingDetails() |
A description of special aspects of the weighting scheme used
in least-squares refinement.
|
StrColumn |
Refine.getLsWeightingScheme() |
The weighting scheme applied in the least-squares process.
|
StrColumn |
RefineAnalyze.getLuzzatiSigmaAFreeDetails() |
Details of the estimation of sigma~a~ for the reflections
treated as a test set during refinement.
|
StrColumn |
RefineAnalyze.getLuzzatiSigmaAObsDetails() |
Special aspects of the estimation of sigma~a~ for the
reflections classified as observed.
|
StrColumn |
EmDepui.getMacromoleculeDescription() |
Indicates whether the authors are providing a macromolecule level description of their sample
|
StrColumn |
Em3dReconstruction.getMagnificationCalibration() |
The magnification calibration method for the 3d reconstruction.
|
StrColumn |
EmFiducialMarkers.getManufacturer() |
Manufacturer source for the fiducial markers
|
StrColumn |
PdbxNmrSpectrometer.getManufacturer() |
The name of the manufacturer of the spectrometer.
|
StrColumn |
PdbxRobotSystem.getManufacturer() |
The name of the manufacturer of the robotic system.
|
StrColumn |
Publ.getManuscriptCreation() |
A description of the word-processor package and computer used to
create the word-processed manuscript stored as
_publ.manuscript_processed.
|
StrColumn |
Publ.getManuscriptProcessed() |
The full manuscript of a paper (excluding possibly the figures
and the tables) output in ASCII characters from a word processor.
|
StrColumn |
Publ.getManuscriptText() |
The full manuscript of a paper (excluding figures and possibly
the tables) output as standard ASCII text.
|
StrColumn |
EmAdmin.getMapHoldDate() |
date of the embargo expiration for this map entry
|
StrColumn |
EmAdmin.getMapReleaseDate() |
date of map release for this entry
|
StrColumn |
Ihm3demRestraint.getMapSegmentFlag() |
A flag that indicates whether or not the 3DEM map is segmented i.e.,
whether the whole map is used or only a portion of it is used (by masking
or by other means) as restraint in the modeling.
|
StrColumn |
EmMapDepositorInfo.getMapType() |
Primary map or additional map classification.
|
StrColumn |
PdbxEntitySrcGenClone.getMarker() |
The type of marker included to allow selection of transformed cells
|
StrColumn |
PdbxPhasingDm.getMaskType() |
The value of _pdbx_phasing_dm.mask_type identifies the type of mask used for
density modification
|
StrColumn |
DiffrnAttenuator.getMaterial() |
Material from which the attenuator is made.
|
StrColumn |
EmEmbedding.getMaterial() |
The embedding material.
|
StrColumn |
EmShadowing.getMaterial() |
The material used in the shadowing.
|
StrColumn |
EmStaining.getMaterial() |
The staining material.
|
StrColumn |
EmSupportFilm.getMaterial() |
The support material covering the em grid.
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getMatrixFlag() |
A flag to indicate that the depositor has provided matrix records
|
StrColumn |
PdbxDepuiStatusFlags.getMergedFail() |
A flag to indicate that merging of new coordinates has failed.
|
StrColumn |
PdbxDepuiStatusFlags.getMergeOutputModelFileName() |
For the last model merge operation, the name of the model file containing output from the merge operation.
|
StrColumn |
PdbxDepuiStatusFlags.getMergePriorModelFileName() |
For the last model merge operation, the name of the model file containing prior data for the current deposition session.
|
StrColumn |
PdbxDepuiStatusFlags.getMergeReplaceModelFileName() |
For the last model merge operation, the name of the model file containing user provided replacement coordinate and model data.
|
StrColumn |
PdbxDatabaseMessage.getMessage() |
The text of the message.
|
StrColumn |
PdbxDatabaseMessage.getMessageId() |
This is an unique and sequential identifier for a message.
|
StrColumn |
PdbxDepositionMessageFileReference.getMessageId() |
The internal identifier assigned to each message.
|
StrColumn |
PdbxDepositionMessageInfo.getMessageId() |
The internal identifier assigned to each message.
|
StrColumn |
PdbxDepositionMessageInfo.getMessageSubject() |
The subject text of the message.
|
StrColumn |
PdbxDepositionMessageInfo.getMessageText() |
The body of the message.
|
StrColumn |
PdbxDatabaseMessage.getMessageType() |
Defines how the message was sent or received.
|
StrColumn |
PdbxDepositionMessageInfo.getMessageType() |
The message type.
|
StrColumn |
PdbxRelatedExpDataSet.getMetadataReference() |
A DOI reference to the metadata decribing the related data set.
|
StrColumn |
DiffrnMeasurement.getMethod() |
Method used to measure intensities.
|
StrColumn |
Em2dProjectionSelection.getMethod() |
The method used for selecting observed assemblies.
|
StrColumn |
Em3dFitting.getMethod() |
The method used to fit atomic coordinates
into the 3dem reconstructed map.
|
StrColumn |
Em3dReconstruction.getMethod() |
The algorithm method used for the 3d-reconstruction.
|
StrColumn |
EmEntityAssemblyMolwt.getMethod() |
The method used to determine the molecular weight.
|
StrColumn |
EmParticleSelection.getMethod() |
The method used for selecting particles
|
StrColumn |
EmSampleSupport.getMethod() |
A description of the method used to produce the support film.
|
StrColumn |
EmVitrification.getMethod() |
The procedure for vitrification.
|
StrColumn |
EmVolumeSelection.getMethod() |
The method used for selecting volumes.
|
StrColumn |
Exptl.getMethod() |
The method used in the experiment.
|
StrColumn |
ExptlCrystalGrow.getMethod() |
The method used to grow the crystals.
|
StrColumn |
PdbxEntitySrcGenCharacter.getMethod() |
The method used for protein characterisation.
|
StrColumn |
PdbxEntitySrcGenFract.getMethod() |
This item describes the method of fractionation.
|
StrColumn |
PdbxEntitySrcGenLysis.getMethod() |
The lysis method.
|
StrColumn |
PdbxNmrRefine.getMethod() |
The method used to determine the structure.
|
StrColumn |
PdbxPhasingDm.getMethod() |
The value of _pdbx_phasing_dm.method identifies the method used for
density modification
|
StrColumn |
PdbxRefineTls.getMethod() |
The method by which the TLS parameters were obtained.
|
StrColumn |
PdbxSerialCrystallographySampleDelivery.getMethod() |
The description of the mechanism by which the specimen in placed in the path
of the source.
|
StrColumn |
PdbxSolnScatterModel.getMethod() |
A description of the methods used in the modelling
|
StrColumn |
Phasing.getMethod() |
A listing of the method or methods used to phase this
structure.
|
StrColumn |
PhasingAveraging.getMethod() |
A description of the phase-averaging phasing method used to
phase this structure.
|
StrColumn |
PhasingIsomorphous.getMethod() |
A description of the isomorphous-phasing method used to
phase this structure.
|
StrColumn |
PhasingMAD.getMethod() |
A description of the MAD phasing method used to phase
this structure.
|
StrColumn |
PhasingMIR.getMethod() |
A description of the MIR phasing method applied to phase this
structure.
|
StrColumn |
Exptl.getMethodDetails() |
A description of special aspects of the experimental method.
|
StrColumn |
PdbxStructAssembly.getMethodDetails() |
Provides details of the method used to determine or
compute the assembly.
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getMethodDetails() |
Provides details of the method used to determine or
compute the assembly.
|
StrColumn |
ExptlCrystalGrow.getMethodRef() |
A literature reference that describes the method used to grow
the crystals.
|
StrColumn |
PdbxPhasingMR.getMethodRotation() |
The value of _pdbx_phasing_MR.method_rotation identifies the method
used for rotation search.
|
StrColumn |
PdbxDatabaseStatus.getMethodsDevelopmentCategory() |
The methods development category in which this
entry has been placed.
|
StrColumn |
PdbxPhasingMR.getMethodTranslation() |
The value of _pdbx_phasing_MR.method_translation identifies the method
used for translation search.
|
StrColumn |
EmImaging.getMicroscopeId() |
This data item is a pointer to _em_microscope.id in
the EM_MICROSCOPE category.
|
StrColumn |
EmImaging.getMicroscopeModel() |
The name of the model of microscope.
|
StrColumn |
PdbxVersion.getMinorVersion() |
Minor version identifier for this datablock:
The minor version is incremented for each datablock revision.
|
StrColumn |
EmDetector.getMode() |
The detector mode used during image recording.
|
StrColumn |
EmImaging.getMode() |
The mode of imaging.
|
StrColumn |
PdbxNmrSpectrometer.getModel() |
The model of the NMR spectrometer.
|
StrColumn |
PdbxRobotSystem.getModel() |
The model of the robotic system.
|
StrColumn |
ChemComp.getModelDetails() |
A description of special aspects of the generation of the
coordinates for the model of the component.
|
StrColumn |
PdbxPhasingMR.getModelDetails() |
The value of _pdbx_phasing_MR.model_details records the details of
model used.
|
StrColumn |
ChemComp.getModelErf() |
A pointer to an external reference file from which the atomic
description of the component is taken.
|
StrColumn |
IhmCrossLinkRestraint.getModelGranularity() |
The coarse-graining information for the crosslink implementation.
|
StrColumn |
IhmModelRepresentationDetails.getModelGranularity() |
The level of detail at which model primitive objects are applied to the structure.
|
StrColumn |
IhmPredictedContactRestraint.getModelGranularity() |
The granularity of the predicted contact as applied to the multi-scale model.
|
StrColumn |
PdbxChemCompModelAtom.getModelId() |
This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL
category.
|
StrColumn |
PdbxChemCompModelAudit.getModelId() |
This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL
category.
|
StrColumn |
PdbxChemCompModelBond.getModelId() |
This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL
category.
|
StrColumn |
PdbxChemCompModelDescriptor.getModelId() |
This data item is a pointer to _pdbx_chem_comp_model.id in the PDBX_CHEM_COMP_MODEL
category.
|
StrColumn |
PdbxChemCompModelFeature.getModelId() |
The component model identifier for this feature.
|
StrColumn |
PdbxChemCompModelReference.getModelId() |
The component model identifier for this feature.
|
StrColumn |
PdbxDccMap.getModelId() |
The component model identifier for this analysis.
|
StrColumn |
PdbxDccRsccMapman.getModelId() |
The component model identifier for this analysis.
|
StrColumn |
IhmModelRepresentationDetails.getModelMode() |
The manner in which the segment is modeled.
|
StrColumn |
IhmModelList.getModelName() |
A decsriptive name for the model.
|
StrColumn |
IhmModelRepresentationDetails.getModelObjectPrimitive() |
The primitive object used to model this segment.
|
StrColumn |
ChemComp.getModelSource() |
The source of the coordinates for the model of the component.
|
StrColumn |
PdbxConnectModification.getModification() |
Type of modification
|
StrColumn |
IhmPolyProbePosition.getModificationFlag() |
A flag to indicate whether the residue is chemically modified or not.
|
StrColumn |
PdbxConnectType.getModified() |
Indicates a modified chemical component.
|
StrColumn |
PdbxConnect.getModifiedDate() |
Date of last modification.
|
StrColumn |
Software.getMods() |
Any noteworthy modifications to the base software, if applicable.
|
StrColumn |
DatabasePDBRev.getModType() |
A code taken from the REVDAT record classifying common types of entry
revisions.
|
StrColumn |
ChemicalFormula.getMoiety() |
Formula with each discrete bonded residue or ion shown as a
separate moiety.
|
StrColumn |
PdbxNmrChemShiftRef.getMolCommonName() |
Common name or abbreviation used in the literature for the molecule used
as a chemical shift reference.
|
StrColumn |
EmDepositorInfo.getMolecularDescriptionFlag() |
Records whether molecular/polymer entities of the EM sample will be described.
|
StrColumn |
Computing.getMolecularGraphics() |
Software used for molecular graphics.
|
StrColumn |
EmAssembly.getMolWtMethod() |
The method used to determine the molecular weight.
|
StrColumn |
EntityPolySeq.getMonId() |
This data item is a pointer to _chem_comp.id in the CHEM_COMP
category.
|
StrColumn |
PdbxBranchScheme.getMonId() |
This data item is a pointer to _atom_site.label_comp_id in the
PDBX_ENTITY_BRANCH_LIST category.
|
StrColumn |
PdbxNonpolyScheme.getMonId() |
Pointer to _atom_site.label_comp_id.
|
StrColumn |
PdbxPolySeqScheme.getMonId() |
Pointer to _entity_poly_seq.mon_id.
|
StrColumn |
PdbxReferenceEntityPolySeq.getMonId() |
This data item is the chemical component identifier of monomer.
|
StrColumn |
StructRefSeqDif.getMonId() |
The monomer type found at this position in the sequence of
the entity or biological unit described in this data block.
|
StrColumn |
ChemComp.getMonNstdClass() |
A description of the class of a nonstandard monomer if the
nonstandard monomer represents a modification of a
standard monomer.
|
StrColumn |
ChemComp.getMonNstdDetails() |
A description of special details of a nonstandard monomer.
|
StrColumn |
ChemComp.getMonNstdFlag() |
'yes' indicates that this is a 'standard' monomer, 'no'
indicates that it is 'nonstandard'.
|
StrColumn |
ChemComp.getMonNstdParent() |
The name of the parent monomer of the nonstandard monomer,
if the nonstandard monomer represents a modification of a
standard monomer.
|
StrColumn |
ChemComp.getMonNstdParentCompId() |
The identifier for the parent component of the nonstandard
component.
|
StrColumn |
DiffrnRadiation.getMonochromator() |
The method used to obtain monochromatic radiation.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getMotionControl() |
Device used to control movement of the fixed sample
|
StrColumn |
PdbxStructMsymGen.getMsymId() |
Uniquely identifies the this structure instance in
point symmetry unit.
|
StrColumn |
IhmModelingProtocolDetails.getMultiScaleFlag() |
A flag to indicate if the modeling is multi scale.
|
StrColumn |
IhmModelingProtocolDetails.getMultiStateFlag() |
A flag to indicate if the modeling is multi state.
|
StrColumn |
EmEntityAssembly.getMutantFlag() |
mutant flag
|
StrColumn |
IhmPolyProbePosition.getMutationFlag() |
A flag to indicate whether the residue has an engineered mutation or not.
|
StrColumn |
IhmPolyProbePosition.getMutResChemCompId() |
The chemical component identifier of the mutated residue, if applicable.
|
StrColumn |
AuditAuthor.getName() |
The name of an author of this data block.
|
StrColumn |
AuditContactAuthor.getName() |
The name of the author of the data block to whom correspondence
should be addressed.
|
StrColumn |
ChemComp.getName() |
The full name of the component.
|
StrColumn |
CitationAuthor.getName() |
Name of an author of the citation; relevant for journal
articles, books and book chapters.
|
StrColumn |
CitationEditor.getName() |
Names of an editor of the citation; relevant for books and
book chapters.
|
StrColumn |
EmAssembly.getName() |
The name of the assembly of observed complexes.
|
StrColumn |
EmBuffer.getName() |
The name of the buffer.
|
StrColumn |
EmBufferComponent.getName() |
name of the buffer component
|
StrColumn |
EmEntityAssembly.getName() |
Name of this component in the observed assembly.
|
StrColumn |
EmSoftware.getName() |
The name of the software package used, e.g., RELION.
|
StrColumn |
EmVirusShell.getName() |
The name for this virus shell.
|
StrColumn |
EntityNameCom.getName() |
A common name for the entity.
|
StrColumn |
EntityNameSys.getName() |
The systematic name for the entity.
|
StrColumn |
ExptlCrystalGrowComp.getName() |
A common name for the component of the solution.
|
StrColumn |
IhmDatasetGroup.getName() |
A name for the dataset group.
|
StrColumn |
IhmEnsembleSubSample.getName() |
A name for the ensemble sub sample.
|
StrColumn |
IhmModelGroup.getName() |
A name for the collection of models.
|
StrColumn |
IhmModelRepresentation.getName() |
Name/brief description for the model representation.
|
StrColumn |
IhmStructAssembly.getName() |
A name for the structural assembly.
|
StrColumn |
IhmStructAssemblyClass.getName() |
A user provided name for the class.
|
StrColumn |
PdbxAuditAuthor.getName() |
The name of an author of this data block.
|
StrColumn |
PdbxBuffer.getName() |
The name of each buffer.
|
StrColumn |
PdbxBufferComponents.getName() |
The name of each buffer component.
|
StrColumn |
PdbxChemCompDepositorInfo.getName() |
The chemical name of the component.
|
StrColumn |
PdbxChemCompSynonyms.getName() |
The synonym of this particular chemical component.
|
StrColumn |
PdbxConstruct.getName() |
_pdbx_construct.name provides a placeholder for the local name
of the construct, for example the plasmid name if this category
is used to list plasmids.
|
StrColumn |
PdbxDataProcessingDetector.getName() |
The name and type of detector.
|
StrColumn |
PdbxDrugInfo.getName() |
Common name of drug.
|
StrColumn |
PdbxEntityName.getName() |
Entity name.
|
StrColumn |
PdbxEntityNameInstance.getName() |
This data item holds an entity name.
|
StrColumn |
PdbxEntityNameTaxonomy.getName() |
This data item holds an entity name or synonym.
|
StrColumn |
PdbxEntityNonpoly.getName() |
A name for the non-polymer entity
|
StrColumn |
PdbxInhibitorInfo.getName() |
Name of inhibitor.
|
StrColumn |
PdbxIonInfo.getName() |
Name of ion.
|
StrColumn |
PdbxLinkedEntity.getName() |
A name of the molecule.
|
StrColumn |
PdbxMoleculeFeatures.getName() |
A name of the molecule.
|
StrColumn |
PdbxMoleculeFeaturesDepositorInfo.getName() |
A name of the molecule.
|
StrColumn |
PdbxNmrSoftware.getName() |
The name of the software used for the task.
|
StrColumn |
PdbxNmrSpectrometer.getName() |
A label that uniquely identifies the NMR spectrometer from other spectrometers
listed in the entry.
|
StrColumn |
PdbxProteinInfo.getName() |
Name of protein.
|
StrColumn |
PdbxReferenceEntityNonpoly.getName() |
A name of the non-polymer entity.
|
StrColumn |
PdbxReferenceLinkedEntity.getName() |
The name of the linked entity example.
|
StrColumn |
PdbxReferenceLinkedEntityCompList.getName() |
The name of the constituent withing the linked entity.
|
StrColumn |
PdbxReferenceMolecule.getName() |
A name of the entity.
|
StrColumn |
PdbxReferenceMoleculeFamily.getName() |
The entity family name.
|
StrColumn |
PdbxReferenceMoleculeRelatedStructures.getName() |
The chemical name for the structure entry in the related database
|
StrColumn |
PdbxReferenceMoleculeSynonyms.getName() |
A synonym name for the entity.
|
StrColumn |
PdbxSolventInfo.getName() |
Name of solvent.
|
StrColumn |
PdbxStructGroupList.getName() |
The name of the group.
|
StrColumn |
PdbxStructLegacyOperList.getName() |
A descriptive name for the transformation operation.
|
StrColumn |
PdbxStructOperList.getName() |
A descriptive name for the transformation operation.
|
StrColumn |
PdbxStructOperListDepositorInfo.getName() |
A descriptive name for the transformation operation.
|
StrColumn |
PdbxTrnaInfo.getName() |
Name of trna.
|
StrColumn |
PublAuthor.getName() |
The name of a publication author.
|
StrColumn |
Software.getName() |
The name of the software.
|
StrColumn |
Chemical.getNameCommon() |
Trivial name by which the compound is commonly known.
|
StrColumn |
PdbxDatabaseStatus.getNameDepositor() |
The last name of the depositor to be used in correspondance.
|
StrColumn |
PdbxContactAuthor.getNameFirst() |
The first name of the author of the data block to whom correspondence
should be addressed.
|
StrColumn |
Journal.getNameFull() |
Journal data items are defined by the journal staff.
|
StrColumn |
SpaceGroup.getNameH_MAlt() |
_space_group.name_H-M_alt allows any Hermann-Mauguin symbol
to be given.
|
StrColumn |
SpaceGroup.getNameHall() |
Space-group symbol defined by Hall.
|
StrColumn |
PdbxContactAuthor.getNameLast() |
The last name of the author of the data block to whom correspondence
should be addressed.
|
StrColumn |
PdbxContactAuthor.getNameMi() |
The middle initial(s) of the author of the data block to whom correspondence
should be addressed.
|
StrColumn |
Chemical.getNameMineral() |
Mineral name accepted by the International Mineralogical
Association.
|
StrColumn |
PdbxContactAuthor.getNameSalutation() |
The salutation of the author of the data block to whom correspondence
should be addressed.
|
StrColumn |
Chemical.getNameStructureType() |
Commonly used structure-type name.
|
StrColumn |
Chemical.getNameSystematic() |
IUPAC or Chemical Abstracts full name of the compound.
|
StrColumn |
PdbxEntityName.getNameType() |
Entity name type.
|
StrColumn |
PdbxEntityNameTaxonomy.getNameType() |
This data item classifies the entity name within
a taxonomic node.
|
StrColumn |
PdbxPhasingMR.getNativeSetId() |
The data set that was treated as the native in this
experiment.
|
StrColumn |
PhasingMIRDer.getNativeSetId() |
The data set that was treated as the native in this
experiment.
|
StrColumn |
PdbxSequenceAnnotation.getNcbiTaxid() |
NCBI TaxID
|
StrColumn |
PdbxEntitySrcSyn.getNcbiTaxonomyId() |
NCBI Taxonomy identifier of the organism from which the sequence of
the synthetic entity was derived.
|
StrColumn |
RefineLsRestrNcs.getNcsModelDetails() |
Special aspects of the manner in which noncrystallographic
restraints were applied to atomic parameters in the domain
specified by _refine_ls_restr_ncs.dom_id and equivalent
atomic parameters in the domains against which it was restrained.
|
StrColumn |
PdbxNonpolyScheme.getNdbSeqNum() |
NDB/RCSB residue number.
|
StrColumn |
PdbxDatabaseStatus.getNdbTid() |
Temporary NDB ID.
|
StrColumn |
PdbxConnectType.getNdbTokenType() |
Internal chemical type identifier used by NDB.
|
StrColumn |
PdbxSugarPhosphateGeometry.getNeighborCompId3prime() |
Neighbor component in the 3' direction.
|
StrColumn |
PdbxSugarPhosphateGeometry.getNeighborCompId5prime() |
Neighbor component in the 5' direction.
|
StrColumn |
PdbxSugarPhosphateGeometry.getNextLabelCompId() |
The next_label_comp_id covalent element of this monomer.
|
StrColumn |
PdbxNmrChemShiftReference.getNitrogenShiftsFlag() |
A value indicating if 15N chemical shifts are being deposited and if IUPAC chemical shift referencing was used.
|
StrColumn |
PdbxNmrConstraints.getNOEInterprotonDistanceEvaluation() |
Describe the method used to quantify the NOE and ROE values.
|
StrColumn |
PdbxNmrConstraints.getNOEMotionalAveragingCorrection() |
Describe any corrections that were made to the NOE data for motional averaging.
|
StrColumn |
PdbxNmrConstraints.getNOEPseudoatomCorrections() |
Describe any corrections made for pseudoatoms
|
StrColumn |
PdbxNmrForceConstants.getNon_bondedInterRadiusOfGyrationTermUnits() |
The units for the force constant for the radius of gyration term.
|
StrColumn |
PdbxNmrForceConstants.getNon_bondedInterVanDerWaalsTermType() |
The type of van der Waals term employed in the target function
used for simulated annealing.
|
StrColumn |
PdbxNmrForceConstants.getNon_bondedInterVanDerWaalsTermUnits() |
The units for the force constant for the van der Waals term.
|
StrColumn |
PdbxEntryDetails.getNonpolymerDetails() |
Additional details about the non-polymer components in this entry.
|
StrColumn |
PdbxReferenceEntityLink.getNonpolyResNum1() |
The residue number for the first of two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntityLink.getNonpolyResNum2() |
The residue number for the second of two entities containing the linkage.
|
StrColumn |
PdbxReferenceEntitySequence.getNRPFlag() |
A flag to indicate a non-ribosomal entity.
|
StrColumn |
EntityPoly.getNstdChirality() |
A flag to indicate whether the polymer contains at least
one monomer unit with chirality different from that specified in
_entity_poly.type.
|
StrColumn |
EntityPoly.getNstdLinkage() |
A flag to indicate whether the polymer contains at least
one monomer-to-monomer link different from that implied by
_entity_poly.type.
|
StrColumn |
EntityPoly.getNstdMonomer() |
A flag to indicate whether the polymer contains at least
one monomer that is not considered standard.
|
StrColumn |
PdbxEntitySrcGenExpress.getNTerminalSeqTag() |
Any N-terminal sequence tag as a string of one letter amino acid codes.
|
StrColumn |
IhmGeometricObjectDistanceRestraint.getObjectCharacteristic() |
The characteristic of the geometric object used in the restraint.
|
StrColumn |
IhmGeometricObjectList.getObjectDescription() |
Brief description of the geometric object.
|
StrColumn |
IhmGeometricObjectList.getObjectName() |
User-provided name for the object.
|
StrColumn |
IhmGeometricObjectList.getObjectType() |
The type of geometric object.
|
StrColumn |
PdbxReferenceEntityPolySeq.getObserved() |
A flag to indicate that this monomer is observed in the instance example.
|
StrColumn |
Reflns.getObservedCriterion() |
The criterion used to classify a reflection as 'observed'.
|
StrColumn |
EmAdmin.getObsoletedDate() |
date that map entry was obsoleted
|
StrColumn |
EmDepui.getObsoleteInstructions() |
Instruction for annotators on why a previous released entry should be obsoleted.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getOccupancyFlag() |
The value of occupancy flag indicates whether the atom is
either unobserved (=1) or has zero occupancy (=0)
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getOccupancyFlag() |
The value of occupancy flag indicates whether the residue
is unobserved (= 1) or the coordinates have an occupancy of zero (=0)
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getOligomericCount() |
The number of polymer molecules in the assembly.
|
StrColumn |
EmEntityAssembly.getOligomericDetails() |
oligomeric details
|
StrColumn |
PdbxStructAssembly.getOligomericDetails() |
Provides the details of the oligomeric state of the assembly.
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getOligomericDetails() |
Provides the details of the oligomeric state of the assembly.
|
StrColumn |
ChemComp.getOneLetterCode() |
For standard polymer components, the one-letter code for
the component.
|
StrColumn |
PdbxSeqMapDepositorInfo.getOneLetterCode() |
Coordinate sequence expressed as string of one-letter residue codes.
|
StrColumn |
PdbxSeqMapDepositorInfo.getOneLetterCodeMod() |
Coordinate sequence expressed as string of one-letter residue codes with
nonstandard residues expressed as 3-letter codes in parentheses.
|
StrColumn |
PdbxReferenceEntitySequence.getOneLetterCodes() |
The one-letter-code sequence for this entity.
|
StrColumn |
SpaceGroupSymop.getOperationXyz() |
A parsable string giving one of the symmetry operations of the
space group in algebraic form.
|
StrColumn |
PdbxReflnsTwin.getOperator() |
The possible merohedral or hemihedral twinning operators for different
point groups are:
True point group Twin operation hkl related to
3 2 along a,b h,-h-k,-l
2 along a*,b* h+k,-k,-l
2 along c -h,-k,l
4 2 along a,b,a*,b* h,-k,-l
6 2 along a,b,a*,b* h,-h-k,-l
321 2 along a*,b*,c -h,-k,l
312 2 along a,b,c -h,-k,l
23 4 along a,b,c k,-h,l
References:
Yeates, T.O.
|
StrColumn |
PdbxStructAssemblyGen.getOperExpression() |
Identifies the operation of collection of operations
from category PDBX_STRUCT_OPER_LIST.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getOperExpression() |
Identifies the operation of collection of operations
from category PDBX_STRUCT_OPER_LIST.
|
StrColumn |
PdbxStructAsymGen.getOperExpression() |
Identifies the operation from category PDBX_STRUCT_OPER_LIST.
|
StrColumn |
PdbxStructMsymGen.getOperExpression() |
Identifies the operation from category PDBX_STRUCT_OPER_LIST.
|
StrColumn |
PdbxStructNcsVirusGen.getOperId() |
Identifies the NCS operation (_struct_ncs_oper.id)
|
StrColumn |
StructNcsEnsGen.getOperId() |
This data item is a pointer to _struct_ncs_oper.id in the
STRUCT_NCS_OPER category.
|
StrColumn |
Chemical.getOpticalRotation() |
The optical rotation in solution of the compound is
specified in the following format:
'[\a]^TEMP^~WAVE~ = SORT (c = CONC, SOLV)'
where:
TEMP is the temperature of the measurement in degrees
Celsius,
WAVE is an indication of the wavelength of the light
used for the measurement,
CONC is the concentration of the solution given as the
mass of the substance in g in 100 ml of solution,
SORT is the signed value (preceded by a + or a - sign)
of 100.\a/(l.c), where \a is the signed optical
rotation in degrees measured in a cell of length l in
dm and c is the value of CONC as defined above, and
SOLV is the chemical formula of the solvent.
|
StrColumn |
EmEulerAngleAssignment.getOrder() |
Stage of the reconstruction in which the angle assignments were made.
|
StrColumn |
IhmOrderedEnsemble.getOrderedBy() |
The parameter based on which the ordering is carried out.
|
StrColumn |
IhmModelingProtocolDetails.getOrderedFlag() |
A flag to indicate if the modeling involves an ensemble ordered by time or other order.
|
StrColumn |
PdbxDatabaseStatusHistory.getOrdinal() |
Ordinal index for the status history list.
|
StrColumn |
EmEntityAssemblyNaturalsource.getOrgan() |
The organ of the organism from which the component was obtained.
|
StrColumn |
EmEntityAssemblyNaturalsource.getOrganelle() |
The organelle from which the component was obtained.
|
StrColumn |
PdbxConstruct.getOrganisation() |
_pdbx_construct.organisation describes the organisation in which
the _pdbx_construct.id is unique.
|
StrColumn |
EmEntityAssemblyNaturalsource.getOrganism() |
The genus-species of the natural organism from which the component was obtained.
|
StrColumn |
EmEntityAssemblyRecombinant.getOrganism() |
Expression system host organism used to produce the component.
|
StrColumn |
EmVirusNaturalHost.getOrganism() |
The host organism from which the virus was isolated.
|
StrColumn |
PdbxEntitySrcSyn.getOrganismCommonName() |
The common name of the organism from which the sequence of
the synthetic entity was derived.
|
StrColumn |
PdbxEntitySrcSyn.getOrganismScientific() |
The scientific name of the organism from which the sequence of
the synthetic entity was derived.
|
StrColumn |
PdbxReferenceEntitySrcNat.getOrganismScientific() |
The scientific name of the organism from which the entity was isolated.
|
StrColumn |
PdbxContactAuthor.getOrganizationType() |
The organization type to which this author is affiliated.
|
StrColumn |
Software.getOs() |
The name of the operating system under which the software
runs.
|
StrColumn |
Software.getOsVersion() |
The version of the operating system under which the software
runs.
|
StrColumn |
EmStartModel.getOther() |
Description of other method/source used to generate the startup model
|
StrColumn |
PdbxNmrChemShiftReference.getOtherShiftsFlag() |
A value indicating if chemical shifts other than 1H, 13C, 15N, or 31P are being deposited.
|
StrColumn |
Citation.getPageFirst() |
The first page of the citation; relevant for journal
articles, books and book chapters.
|
StrColumn |
Journal.getPageFirst() |
Journal data items are defined by the journal staff.
|
StrColumn |
Citation.getPageLast() |
The last page of the citation; relevant for journal
articles, books and book chapters.
|
StrColumn |
Journal.getPageLast() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxAtlas.getPageName() |
Text of the Atlas index entry.
|
StrColumn |
NdbStructNaBasePair.getPairName() |
Text label for this base pair.
|
StrColumn |
Journal.getPaperCategory() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxEntitySrcGenProdOtherParameter.getParameter() |
The name of the parameter associated with the process step
|
StrColumn |
PdbxXplorFile.getParamFile() |
Parameter file name in X-PLOR/CNS refinement.
|
StrColumn |
PhasingIsomorphous.getParent() |
Reference to the structure used to generate starting phases
if the structure referenced in this data block was phased
by virtue of being isomorphous to a known structure (e.g.
|
StrColumn |
PdbxChemCompSubcomponentEntityList.getParentCompId() |
The parent component identifier corresponding to this entity.
|
StrColumn |
PdbxStructModResidue.getParentCompId() |
The parent component identifier for this modified polymer component.
|
StrColumn |
PdbxEntityNameTaxonomyTree.getParentId() |
This data item identifies the nearest parent node in
the entity name taxonomy.
|
StrColumn |
PdbxDepositionMessageInfo.getParentMessageId() |
The identifier of the parent message or the message to which the current message responds.
|
StrColumn |
PdbxReferenceEntityPolySeq.getParentMonId() |
This data item is the chemical component identifier for the parent component corresponding to this monomer.
|
StrColumn |
PdbxConnect.getParentResidue() |
Parent residue
|
StrColumn |
PdbxDccDensity.getPartialBValueCorrectionAttempted() |
Whether attempt to convert the partial to full B factors before
validation.
|
StrColumn |
PdbxDccDensity.getPartialBValueCorrectionSuccess() |
Whether the the conversion of partial B to full B factor is
successful (Y) or not (N).
|
StrColumn |
PdbxDepositionMessageFileReference.getPartitionNumber() |
The partition number of the referenced data file.
|
StrColumn |
PdbxBranchScheme.getPdbAsymId() |
This data item is a pointer to _atom_site.auth_asym_id in the
ATOM_SITE category.
|
StrColumn |
Em3dFittingList.getPdbChainId() |
The ID of the biopolymer chain used for fitting, e.g., A.
|
StrColumn |
PdbxEntityNameInstance.getPdbChainId() |
This data item holds the PDB chain id of this
entity within the entry.
|
StrColumn |
PdbxMissingResidueList.getPdbChainId() |
PDB chain ID.
|
StrColumn |
PdbxSequenceAnnotation.getPdbChainId() |
PDB chain ID.
|
StrColumn |
PdbxStructNcsVirusGen.getPdbChainId() |
The NCS operation is applied to the chain identified
by this id.
|
StrColumn |
Em3dFittingList.getPdbChainResidueRange() |
The molecular entities represented in this fitting description.
|
StrColumn |
PdbxDatabaseStatus.getPdbDateOfAuthorApproval() |
This is the date when PDB received the author's approval for an
entry which has been processed by NDB.
|
StrColumn |
Em3dFittingList.getPdbEntryId() |
The PDB code for the entry used in fitting.
|
StrColumn |
PdbxDatabaseStatus.getPdbFormatCompatible() |
A flag indicating that the entry is compatible with the PDB format.
|
StrColumn |
PdbxDccDensity.getPdbid() |
The PDB id code.
|
StrColumn |
PdbxDccGeometry.getPdbid() |
The PDB id code.
|
StrColumn |
PdbxDccMapman.getPdbid() |
The PDB id code.
|
StrColumn |
PdbxDccRsccMapmanOverall.getPdbid() |
The PDB id code.
|
StrColumn |
EmStartModel.getPdbId() |
PDB id of the model coordinates used to generate the startup model
|
StrColumn |
PdbxDatabasePDBObsSpr.getPdbId() |
The new PDB identifier for the replaced entry.
|
StrColumn |
PdbxDccMap.getPdbId() |
The PDB id code (four characters).
|
StrColumn |
PdbxDccRsccMapman.getPdbId() |
The PDB id code.
|
StrColumn |
PdbxEntityNameInstance.getPdbId() |
This data item holds a PDB ID code
|
StrColumn |
PdbxDbref.getPdbIdCode() |
PDB id code.
|
StrColumn |
PdbxDepositGroupIndex.getPdbIdCode() |
A PDB accession code.
|
StrColumn |
PdbxBranchScheme.getPdbInsCode() |
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxNonpolyScheme.getPdbInsCode() |
PDB insertion code.
|
StrColumn |
PdbxPolySeqScheme.getPdbInsCode() |
PDB insertion code.
|
StrColumn |
PdbxStructChemCompDiagnostics.getPdbInsCode() |
Insertion code of the monomer or ligand .
|
StrColumn |
PdbxStructChemCompFeature.getPdbInsCode() |
Insertion code of the monomer or ligand .
|
StrColumn |
PdbxAtomSiteAnisoTls.getPDBInsCode() |
This data item is a pointer to _atom_site.pdbx_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxChemCompInstanceDepositorInfo.getPDBInsCode() |
Optional element of the chemical component instance identifier.
|
StrColumn |
PdbxDistantSolventAtoms.getPDBInsCode() |
Part of the identifier for the distant solvent atom.
|
StrColumn |
PdbxRefineComponent.getPDBInsCode() |
A component of the identifier for the component.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPDBInsCode() |
Optional atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPDBInsCode() |
Optional atom_site identifier.
|
StrColumn |
PdbxStructGroupComponents.getPDBInsCode() |
Part of the identifier for the component in this group assignment.
|
StrColumn |
PdbxStructModResidue.getPDBInsCode() |
Part of the identifier for the modified polymer component.
|
StrColumn |
PdbxStructRefSeqInsertion.getPDBInsCode() |
Part of the author identifier of the inserted residue.
|
StrColumn |
PdbxStructSpecialSymmetry.getPDBInsCode() |
Part of the identifier for the molecular component.
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getPDBInsCode() |
Part of the identifier for the unobserved or zero occupancy atom.
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getPDBInsCode() |
Part of the identifier for the unobserved or zero occupancy residue.
|
StrColumn |
PdbxValidateChiral.getPDBInsCode() |
Optional identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateMainChainPlane.getPDBInsCode() |
Optional identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanes.getPDBInsCode() |
Optional identifier of the residue in which the plane is calculated
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePlanesAtom.getPDBInsCode() |
Optional identifier of an atom site that defines the plane
|
StrColumn |
PdbxValidateTorsion.getPDBInsCode() |
Optional identifier of the residue
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidateCloseContact.getPDBInsCode1() |
Optional identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getPDBInsCode1() |
Optional identifier of the first residue in the bond
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getPDBInsCode1() |
Optional identifier of the first of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getPDBInsCode1() |
Optional identifier of the first of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getPDBInsCode1() |
Optional identifier of the first of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getPDBInsCode1() |
Optional identifier of the first of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidateCloseContact.getPDBInsCode2() |
Optional identifier of the second of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidatePeptideOmega.getPDBInsCode2() |
Optional identifier of the second residue in the bond
This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
ATOM_SITE category.
|
StrColumn |
PdbxValidatePolymerLinkage.getPDBInsCode2() |
Optional identifier of the second of the two atom sites that
define the linkage.
|
StrColumn |
PdbxValidateRmsdAngle.getPDBInsCode2() |
Optional identifier of the second of the three atom sites that
define the angle.
|
StrColumn |
PdbxValidateRmsdBond.getPDBInsCode2() |
Optional identifier of the second of the two atom sites that
define the covalent bond.
|
StrColumn |
PdbxValidateSymmContact.getPDBInsCode2() |
Optional identifier of the second of the two atom sites that
define the close contact.
|
StrColumn |
PdbxValidateRmsdAngle.getPDBInsCode3() |
Optional identifier of the third of the three atom sites that
define the angle.
|
StrColumn |
PdbxMissingResidueList.getPdbInsertionCode() |
PDB chain ID.
|
StrColumn |
PdbxEntityNameInstance.getPdbMolId() |
This data item holds the PDB molecule id of this
entity within the entry.
|
StrColumn |
PdbxBranchScheme.getPdbMonId() |
This data item is a pointer to _atom_site.auth_comp_id in the
ATOM_SITE category.
|
StrColumn |
PdbxNonpolyScheme.getPdbMonId() |
PDB residue identifier.
|
StrColumn |
PdbxPolySeqScheme.getPdbMonId() |
PDB residue identifier.
|
StrColumn |
PdbxMissingResidueList.getPdbResidueName() |
PDB chain ID.
|
StrColumn |
PdbxMissingResidueList.getPdbResidueNumber() |
PDB chain ID.
|
StrColumn |
PdbxBranchScheme.getPdbSeqNum() |
This data item is a pointer to _atom_site.auth_seq_id in the
ATOM_SITE category.
|
StrColumn |
PdbxNonpolyScheme.getPdbSeqNum() |
PDB residue number.
|
StrColumn |
PdbxPolySeqScheme.getPdbSeqNum() |
PDB residue number.
|
StrColumn |
PdbxNonpolyScheme.getPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
PdbxPolySeqScheme.getPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
PdbxStructChemCompDiagnostics.getPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
PdbxStructChemCompFeature.getPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
PdbxStructRefSeqFeature.getPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
PdbxDccDensity.getPdbtype() |
The keywords of the structure (taken from
_struct_keywords.pdbx_keywords).
|
StrColumn |
StructBiolGen.getPdbxAfterBeginResidueNo() |
The new residue number after generation of portions of
the biomolecule.
|
StrColumn |
StructBiolGen.getPdbxAfterEndResidueNo() |
The new residue number after generation of portions of
the biomolecule.
|
StrColumn |
StructBiol.getPdbxAggregationState() |
A description of the structural aggregation in this assembly.
|
StrColumn |
StructRef.getPdbxAlignBegin() |
Beginning index in the chemical sequence from the
reference database.
|
StrColumn |
StructRef.getPdbxAlignEnd() |
Ending index in the chemical sequence from the
reference database.
|
StrColumn |
ChemCompAtom.getPdbxAltAtomId() |
An alternative identifier for the atom.
|
StrColumn |
ChemCompAtom.getPdbxAltCompId() |
An alternative identifier for the atom.
|
StrColumn |
StructAsym.getPdbxAltId() |
This data item is a pointer to _atom_site.ndb_alias_strand_id the
ATOM_SITE category.
|
StrColumn |
EntitySrcGen.getPdbxAltSourceFlag() |
This data item identifies cases in which an alternative source
modeled.
|
StrColumn |
EntitySrcNat.getPdbxAltSourceFlag() |
This data item identifies cases in which an alternative source
modeled.
|
StrColumn |
PdbxEntitySrcSyn.getPdbxAltSourceFlag() |
This data item identifies cases in which an alternative source
modeled.
|
StrColumn |
ChemComp.getPdbxAmbiguousFlag() |
A preliminary classification used by PDB to indicate
that the chemistry of this component while described
as clearly as possible is still ambiguous.
|
StrColumn |
DiffrnRadiation.getPdbxAnalyzer() |
Indicates the method used to obtain monochromatic radiation.
|
StrColumn |
PdbxDatabaseStatus.getPdbxAnnotator() |
The initials of the annotator processing this entry.
|
StrColumn |
PhasingMAD.getPdbxAnomScatMethod() |
_phasing_MAD.pdbx_anom_scat_method records the method
used to locate anomalous scatterers for MAD phasing.
|
StrColumn |
EntityKeywords.getPdbxAntibodyIsotype() |
PDB placeholder.
|
StrColumn |
ChemCompAtom.getPdbxAromaticFlag() |
A flag indicating an aromatic atom.
|
StrColumn |
ChemCompBond.getPdbxAromaticFlag() |
A flag indicating an aromatic bond.
|
StrColumn |
StructBiol.getPdbxAssemblyMethod() |
The method or experiment used to determine this assembly.
|
StrColumn |
RefineLsRestrNcs.getPdbxAsymId() |
A reference to _struct_asym.id.
|
StrColumn |
EntitySrcNat.getPdbxAtcc() |
Americal Tissue Culture Collection number.
|
StrColumn |
AtomSite.getPdbxAtomGroup() |
The ATOM group code used by the NDB.
|
StrColumn |
GeomAngle.getPdbxAtomSitePDBInsCode1() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomBond.getPdbxAtomSitePDBInsCode1() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomContact.getPdbxAtomSitePDBInsCode1() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomTorsion.getPdbxAtomSitePDBInsCode1() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomAngle.getPdbxAtomSitePDBInsCode2() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomBond.getPdbxAtomSitePDBInsCode2() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomContact.getPdbxAtomSitePDBInsCode2() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomTorsion.getPdbxAtomSitePDBInsCode2() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomAngle.getPdbxAtomSitePDBInsCode3() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomTorsion.getPdbxAtomSitePDBInsCode3() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
GeomTorsion.getPdbxAtomSitePDBInsCode4() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
PhasingMADSet.getPdbxAtomType() |
record the type of heavy atoms which produce anomolous singal.
|
StrColumn |
AtomSite.getPdbxAuthAltId() |
Author's alternate location identifier.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthAltId() |
Pointer to _atom_site.pdbx_auth_alt_id.
|
StrColumn |
AtomSite.getPdbxAuthAsymId() |
Author's strand id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthAsymId() |
Pointer to _atom_site.auth_asym_id
|
StrColumn |
RefineLsRestrNcs.getPdbxAuthAsymId() |
A reference to the PDB Chain ID
|
StrColumn |
StructSite.getPdbxAuthAsymId() |
A component of the identifier for the ligand in the site.
|
StrColumn |
StructMonProtCis.getPdbxAuthAsymId2() |
Pointer to _atom_site.auth_asym_id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthAtomId() |
Pointer to _atom_site.auth_atom_id
|
StrColumn |
AtomSite.getPdbxAuthAtomName() |
Author's atom name.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthAtomName() |
Author's atom name.
|
StrColumn |
AtomSite.getPdbxAuthCompId() |
Author's residue name.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthCompId() |
Pointer to _atom_site.auth_comp_id
|
StrColumn |
StructSite.getPdbxAuthCompId() |
A component of the identifier for the ligand in the site.
|
StrColumn |
StructMonProtCis.getPdbxAuthCompId2() |
Pointer to _atom_site.auth_comp_id.
|
StrColumn |
StructMonProtCis.getPdbxAuthInsCode() |
PDB Insertion code
|
StrColumn |
StructSite.getPdbxAuthInsCode() |
PDB insertion code for the ligand in the site.
|
StrColumn |
StructSiteGen.getPdbxAuthInsCode() |
PDB insertion code.
|
StrColumn |
StructMonProtCis.getPdbxAuthInsCode2() |
PDB Insertion code
|
StrColumn |
StructRefSeq.getPdbxAuthSeqAlignBeg() |
Initial position in the PDB sequence segment.
|
StrColumn |
StructRefSeq.getPdbxAuthSeqAlignEnd() |
Ending position in the PDB sequence segment
|
StrColumn |
AtomSite.getPdbxAuthSeqId() |
Author's sequence identifier.
|
StrColumn |
AtomSiteAnisotrop.getPdbxAuthSeqId() |
Pointer to _atom_site.auth_seq_id
|
StrColumn |
StructSite.getPdbxAuthSeqId() |
A component of the identifier for the ligand in the site.
|
StrColumn |
StructMonProtCis.getPdbxAuthSeqId2() |
Pointer to _atom_site.auth_seq_id
|
StrColumn |
StructRefSeqDif.getPdbxAuthSeqNum() |
Insertion code in PDB sequence
|
StrColumn |
ExptlCrystalGrowComp.getPdbxBath() |
The identification of the cystallization bath.
|
StrColumn |
StructBiolGen.getPdbxBeforeBeginResidueNo() |
The number of the first residue to which the symmetry
operations have to be applied to generate a portion of
the biomolecule.
|
StrColumn |
StructBiolGen.getPdbxBeforeEndResidueNo() |
The number of the last residue to which the symmetry
operations have to be applied to generate a portion of
the biomolecule.
|
StrColumn |
StructConf.getPdbxBegPDBInsCode() |
A component of the identifier for the residue at which the
conformation segment starts.
|
StrColumn |
StructSheetRange.getPdbxBegPDBInsCode() |
A component of the identifier for the residue at which the
beta sheet range begins.
|
StrColumn |
StructAsym.getPdbxBlankPDBChainidFlag() |
A flag indicating that this entity was originally labeled
with a blank PDB chain id.
|
StrColumn |
EntityPoly.getPdbxBuildSelfReference() |
A code to indicate that this sequence should be assigned
a PDB sequence reference.
|
StrColumn |
ChemComp.getPdbxCasnum() |
Chemical Abstract Service identifier.
|
StrColumn |
Struct.getPdbxCASPFlag() |
The item indicates whether the entry is a CASP target, a CASD-NMR target,
or similar target participating in methods development experiments.
|
StrColumn |
EntitySrcNat.getPdbxCell() |
A particular cell type.
|
StrColumn |
EntitySrcNat.getPdbxCellLine() |
The specific line of cells.
|
StrColumn |
EntitySrcNat.getPdbxCellularLocation() |
Identifies the location inside (or outside) the cell.
|
StrColumn |
ChemComp.getPdbxClass1() |
Internal classifier used to organize ligand
dictionary (broad chemical class).
|
StrColumn |
ChemComp.getPdbxClass2() |
Internal classifier used to organize ligand
dictionary (notable chemical features).
|
StrColumn |
Database.getPdbxCodeNDB() |
The code assigned by the NDB.
|
StrColumn |
Database.getPdbxCodePDB() |
The code assigned by the PDB.
|
StrColumn |
DiffrnDetector.getPdbxCollectionDate() |
The date of data collection.
|
StrColumn |
ChemCompAtom.getPdbxComponentAtomId() |
The atom identifier in the subcomponent where a
larger component has been divided subcomponents.
|
StrColumn |
ChemCompAtom.getPdbxComponentCompId() |
The component identifier for the subcomponent where a
larger component has been divided subcomponents.
|
StrColumn |
ChemComp.getPdbxCompType() |
A type classification of this chemical component.
|
StrColumn |
ExptlCrystalGrowComp.getPdbxConcFinal() |
The concentration of this component in the final
crystallization solution.
|
StrColumn |
ExptlCrystal.getPdbxCrystalImage() |
A code to indicate that a crystal image is available
for this crystal.
|
StrColumn |
ExptlCrystal.getPdbxCrystalImageFormat() |
The image format for the file containing the image of crystal specified
as an RFC2045/RFC2046 mime type.
|
StrColumn |
ExptlCrystal.getPdbxCrystalImageUrl() |
The URL for an a file containing the image of crystal.
|
StrColumn |
EntityPoly.getPdbxCTerminalSeqOneLetterCode() |
C-terminal cloning artifacts and/or HIS tag.
|
StrColumn |
EntitySrcNat.getPdbxCultureCollection() |
Culture Collection identifier.
|
StrColumn |
Citation.getPdbxDatabaseIdDOI() |
Document Object Identifier used by doi.org to uniquely
specify bibliographic entry.
|
StrColumn |
Computing.getPdbxDataReductionDs() |
Program/package name for data reduction/data scaling
|
StrColumn |
Computing.getPdbxDataReductionIi() |
Program/package name for data reduction/intensity integration software
|
StrColumn |
DiffrnMeasurement.getPdbxDate() |
The date of data measurement
|
StrColumn |
StructRef.getPdbxDbAccession() |
Accession code assigned by the reference database.
|
StrColumn |
StructRefSeq.getPdbxDbAccession() |
Accession code of the reference database.
|
StrColumn |
StructRefSeq.getPdbxDbAlignBegInsCode() |
Initial insertion code of the sequence segment of the
reference database.
|
StrColumn |
StructRefSeq.getPdbxDbAlignEndInsCode() |
Ending insertion code of the sequence segment of the
reference database.
|
StrColumn |
StructRef.getPdbxDbIsoform() |
Database code assigned by the reference database for a sequence isoform.
|
StrColumn |
Entity.getPdbxDescription() |
A description of the entity.
|
StrColumn |
EntitySrcGen.getPdbxDescription() |
Information on the source which is not given elsewhere.
|
StrColumn |
Struct.getPdbxDescriptor() |
An automatically generated descriptor for an NDB structure or
the unstructured content of the PDB COMPND record.
|
StrColumn |
ExptlCrystalGrow.getPdbxDetails() |
Text description of crystal growth procedure.
|
StrColumn |
Struct.getPdbxDetails() |
Additional remarks related to this structure deposition that have not
been included in details data items elsewhere.
|
StrColumn |
StructKeywords.getPdbxDetails() |
Keywords describing this structure.
|
StrColumn |
Refine.getPdbxDiffrnId() |
An identifier for the diffraction data set used in this refinement.
|
StrColumn |
Refln.getPdbxDiffrnId() |
An optional identifier for the diffraction data set containing this reflection.
|
StrColumn |
Reflns.getPdbxDiffrnId() |
An identifier for the diffraction data set for this set of summary statistics.
|
StrColumn |
ReflnsShell.getPdbxDiffrnId() |
An identifier for the diffraction data set corresponding to this resolution shell.
|
StrColumn |
DiffrnRadiation.getPdbxDiffrnProtocol() |
SINGLE WAVELENGTH, LAUE, or MAD.
|
StrColumn |
Entry.getPdbxDOI() |
Document Object Identifier (DOI) for this entry registered
with http://crossref.org.
|
StrColumn |
Reflns.getPdbxDResOptMethod() |
The computational method used to determine the optical
resolution limits _reflns.pdbx_d_res_high_opt and
_reflns.pdbx_d_res_low_opt.
|
StrColumn |
Entity.getPdbxEc() |
Enzyme Commission (EC) number(s)
|
StrColumn |
EntityKeywords.getPdbxEc() |
Enzyme Commission (EC) number(s)
|
StrColumn |
StructConf.getPdbxEndPDBInsCode() |
A component of the identifier for the residue at which the
conformation segment ends.
|
StrColumn |
StructSheetRange.getPdbxEndPDBInsCode() |
A component of the identifier for the residue at which the
beta sheet range ends.
|
StrColumn |
RefineLsRestrNcs.getPdbxEnsId() |
This is a unique identifier for a collection NCS related domains.
|
StrColumn |
StructNcsDom.getPdbxEnsId() |
This is a unique identifier for a collection NCS related domains.
|
StrColumn |
StructNcsDomLim.getPdbxEnsId() |
This is a unique identifier for a collection NCS related domains.
|
StrColumn |
StructSite.getPdbxEvidenceCode() |
Source of evidence supporting the assignment of this site.
|
StrColumn |
EntityPoly.getPdbxExplicitLinkingFlag() |
A flag to indicate that linking data is explicitly provided for this polymer
in the PDBX_ENTITY_POLY_COMP_LINK_LIST category
|
StrColumn |
Entity.getPdbxFormulaWeightExptlMethod() |
Method used to determine _entity.pdbx_formula_weight_exptl.
|
StrColumn |
Struct.getPdbxFormulaWeightMethod() |
Method used to determine _struct.pdbx_formula_weight.
|
StrColumn |
StructBiol.getPdbxFormulaWeightMethod() |
Method used to determine _struct_biol.pdbx_formula_weight.
|
StrColumn |
StructAsym.getPdbxFractionPerAsymUnit() |
This data item indicates wheather the structural elements exists
only as part of its whole molecule in the asymmetric unit.
|
StrColumn |
Entity.getPdbxFragment() |
Entity fragment description(s).
|
StrColumn |
EntityKeywords.getPdbxFragment() |
Entity fragment description(s).
|
StrColumn |
EntitySrcNat.getPdbxFragment() |
A domain or fragment of the molecule.
|
StrColumn |
Symmetry.getPdbxFullSpaceGroupNameH_M() |
Used for PDB space group:
Example: 'C 1 2 1' (instead of C 2)
'P 1 2 1' (instead of P 2)
'P 1 21 1' (instead of P 21)
'P 1 1 21' (instead of P 21 -unique C axis)
'H 3' (instead of R 3 -hexagonal)
'H 3 2' (instead of R 3 2 -hexagonal)
|
StrColumn |
StructBiolGen.getPdbxFullSymmetryOperation() |
This item expresses category _struct_biol_gen.symmetry
on an X, Y and Z basis.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcAtcc() |
American Type Culture Collection tissue culture number.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcCell() |
Cell type.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcCellLine() |
The specific line of cells.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcCellularLocation() |
Identifies the location inside (or outside) the cell.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcCultureCollection() |
Culture collection identifier.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcFragment() |
A domain or fragment of the molecule.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcGene() |
Identifies the gene.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcNcbiTaxonomyId() |
NCBI Taxonomy identifier for the gene source organism.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcOrgan() |
Organized group of tissues that carries on a specialized function.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcOrganelle() |
Organized structure within cell.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcPlasmid() |
The source plasmid.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcPlasmidName() |
The source plasmid.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcScientificName() |
Scientific name of the organism.
|
StrColumn |
EntitySrcGen.getPdbxGeneSrcVariant() |
Identifies the variant.
|
StrColumn |
AtomSite.getPdbxGroupNDB() |
The ATOM group code used by the NDB.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgAtcc() |
Americal Tissue Culture Collection of the expression system.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgCell() |
Cell type from which the gene is derived.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgCellLine() |
A specific line of cells used as the expression system.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgCellularLocation() |
Identifies the location inside (or outside) the cell which
expressed the molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgCultureCollection() |
Culture collection of the expression system.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgGene() |
Specific gene which expressed the molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgNcbiTaxonomyId() |
NCBI Taxonomy identifier for the expression system organism.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgOrgan() |
Specific organ which expressed the molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgOrganelle() |
Specific organelle which expressed the molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgScientificName() |
The scientific name of the organism that served as host for the
production of the entity.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgStrain() |
The strain of the organism in which the entity was
expressed.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgTissue() |
The specific tissue which expressed the molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgTissueFraction() |
The fraction of the tissue which expressed the
molecule.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgVariant() |
Variant of the organism used as the expression system.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgVector() |
Identifies the vector used.
|
StrColumn |
EntitySrcGen.getPdbxHostOrgVectorType() |
Identifies the type of vector used (plasmid, virus, or cosmid).
|
StrColumn |
StructMonProtCis.getPdbxId() |
ordinal index
|
StrColumn |
ChemComp.getPdbxIdealCoordinatesDetails() |
This data item identifies the source of the ideal coordinates in the
component definition.
|
StrColumn |
ChemComp.getPdbxIdealCoordinatesMissingFlag() |
This data item identifies if ideal coordinates are missing in this definition.
|
StrColumn |
ChemComp.getPdbxInitialDate() |
Date component was added to database.
|
StrColumn |
Refine.getPdbxIsotropicThermalModel() |
Whether the structure was refined with indvidual
isotropic, anisotropic or overall temperature factor.
|
StrColumn |
StructKeywords.getPdbxKeywords() |
Terms characterizing the macromolecular structure.
|
StrColumn |
AtomSiteAnisotrop.getPdbxLabelAltId() |
Pointer to _atom_site.label_alt_id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxLabelAsymId() |
Pointer to _atom_site.label_asym_id
|
StrColumn |
StructMonProtCis.getPdbxLabelAsymId2() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxLabelAtomId() |
Pointer to _atom_site.label_atom_id
|
StrColumn |
AtomSiteAnisotrop.getPdbxLabelCompId() |
Pointer to _atom_site.label_comp_id
|
StrColumn |
StructMonProtCis.getPdbxLabelCompId2() |
Pointer to _atom_site.label_comp_id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxLabelInsCode() |
NDB INSERTION CODE
|
StrColumn |
AtomSite.getPdbxLabelSeqNum() |
Sequential residue number used by NDB.
|
StrColumn |
ChemCompAtom.getPdbxLeavingAtomFlag() |
A flag indicating a leaving atom.
|
StrColumn |
StructConn.getPdbxLeavingAtomFlag() |
This data item identifies if the linkage has displaced leaving atoms
on both, one or none of the connected atoms forming the linkage.
|
StrColumn |
Refine.getPdbxLsCrossValidMethod() |
Whether the cross validataion method was used through
out or only at the end.
|
StrColumn |
Refine.getPdbxMethodToDetermineStruct() |
Method(s) used to determine the structure.
|
StrColumn |
ChemComp.getPdbxModelCoordinatesDbCode() |
This data item identifies the PDB database code from which the heavy
atom model coordinates were obtained.
|
StrColumn |
ChemComp.getPdbxModelCoordinatesDetails() |
This data item provides additional details about the model coordinates
in the component definition.
|
StrColumn |
ChemComp.getPdbxModelCoordinatesMissingFlag() |
This data item identifies if model coordinates are missing in this definition.
|
StrColumn |
Struct.getPdbxModelDetails() |
Text description of the methodology which produced this
model structure.
|
StrColumn |
Struct.getPdbxModelTypeDetails() |
A description of the type of structure model.
|
StrColumn |
Entity.getPdbxModification() |
Description(s) of any chemical or post-translational modifications
|
StrColumn |
ChemComp.getPdbxModificationDetails() |
For nonstandard components a text description
of modification of the parent component.
|
StrColumn |
StructAsym.getPdbxModified() |
This data item indicates whether the structural elements are modified.
|
StrColumn |
ChemComp.getPdbxModifiedDate() |
Date component was last modified.
|
StrColumn |
DiffrnRadiation.getPdbxMonochromaticOrLaueML() |
Monochromatic or Laue.
|
StrColumn |
Entity.getPdbxMutation() |
Details about any entity mutation(s).
|
StrColumn |
EntityKeywords.getPdbxMutation() |
Entity mutation description(s).
|
StrColumn |
EntitySrcNat.getPdbxNcbiTaxonomyId() |
NCBI Taxonomy identifier for the source organism.
|
StrColumn |
AtomSite.getPdbxNcsDomId() |
The NCS domain to which the atom position is assigned.
|
StrColumn |
StructBiolGen.getPdbxNewAsymId() |
This category gives the NDB strand ids for the complete
biomolecule after it is generated.
|
StrColumn |
StructBiolGen.getPdbxNewPdbAsymId() |
This data item is the PDB strand ID of the strand which will be
generated.
|
StrColumn |
AtomSite.getPdbxNotInAsym() |
Will identify with a 'Y' that this strand got generated.
|
StrColumn |
AtomSiteAnisotrop.getPdbxNotInAsym() |
Will identify with a 'Y' that this strand got generated.
|
StrColumn |
ChemComp.getPdbxNscnum() |
NSC identifier for component.
|
StrColumn |
EntityPoly.getPdbxNTerminalSeqOneLetterCode() |
N-terminal cloning artifacts and/or HIS tag.
|
StrColumn |
StructMonProtCis.getPdbxOmegaAngle() |
omega torsion angle
|
StrColumn |
EntitySrcNat.getPdbxOrgan() |
Organized group of tissues that carries on a specialized function.
|
StrColumn |
EntitySrcNat.getPdbxOrganelle() |
Organized structure within cell.
|
StrColumn |
EntitySrcNat.getPdbxOrganismScientific() |
Scientific name of the organism of the natural source.
|
StrColumn |
StructBiol.getPdbxParentBiolId() |
An identifier for the parent biological assembly
if this biological unit is part of a complex assembly.
|
StrColumn |
Entity.getPdbxParentEntityId() |
An identifier for the parent entity if this entity
is part of a complex entity.
|
StrColumn |
AtomSite.getPdbxPDBAtomName() |
PDB atom name.
|
StrColumn |
AtomSiteAnisotrop.getPdbxPDBAtomName() |
PDB atom name.
|
StrColumn |
StructConf.getPdbxPDBHelixClass() |
This item is a place holder for the helix class used in the PDB
HELIX record.
|
StrColumn |
StructConf.getPdbxPDBHelixId() |
A placeholder for the helix identifier of the PDB
HELIX record.
|
StrColumn |
StructAsym.getPdbxPDBId() |
This data item is a pointer to _atom_site.pdbx_PDB_strand_id the
ATOM_SITE category.
|
StrColumn |
StructConn.getPdbxPDBId() |
A placeholder for the PDB id in the case the category
is used to hold the information of the MODRES record of
a PDB file.
|
StrColumn |
StructRefSeqDif.getPdbxPdbIdCode() |
The PDB ID code.
|
StrColumn |
StructRefSeq.getPdbxPDBIdCode() |
The PDB code of the structure.
|
StrColumn |
StructRefSeqDif.getPdbxPdbInsCode() |
Insertion code in PDB sequence
|
StrColumn |
AtomSite.getPdbxPDBInsCode() |
PDB insertion code.
|
StrColumn |
AtomSiteAnisotrop.getPdbxPDBInsCode() |
Pointer to _atom_site.pdbx_PDB_ins_code
|
StrColumn |
StructMonProtCis.getPdbxPDBInsCode() |
Pointer to _atom_site.pdbx_PDB_ins_code
|
StrColumn |
StructMonProtCis.getPdbxPDBInsCode2() |
Pointer to _atom_site.pdbx_PDB_ins_code
|
StrColumn |
AtomSite.getPdbxPDBResidueName() |
PDB residue name.
|
StrColumn |
AtomSiteAnisotrop.getPdbxPDBResidueName() |
PDB residue name.
|
StrColumn |
AtomSite.getPdbxPDBResidueNo() |
PDB residue number.
|
StrColumn |
AtomSiteAnisotrop.getPdbxPDBResidueNo() |
PDB residue number.
|
StrColumn |
StructRefSeqDif.getPdbxPdbStrandId() |
PDB strand/chain id.
|
StrColumn |
AtomSite.getPdbxPDBStrandId() |
PDB strand id.
|
StrColumn |
AtomSiteAnisotrop.getPdbxPDBStrandId() |
PDB strand id.
|
StrColumn |
ExptlCrystalGrow.getPdbxPHRange() |
The range of pH values at which the crystal was grown.
|
StrColumn |
EntitySrcNat.getPdbxPlasmidDetails() |
Details about the plasmid.
|
StrColumn |
EntitySrcNat.getPdbxPlasmidName() |
The plasmid containing the gene.
|
StrColumn |
ChemCompAtom.getPdbxPolymerType() |
Is the atom in a polymer or non-polymer subcomponent in the BIRD definition.
|
StrColumn |
ChemComp.getPdbxProcessingSite() |
This data item identifies the deposition site that processed
this chemical component defintion.
|
StrColumn |
EntityNameCom.getPdbxProvenance() |
Provides the provenance of the name in the _entity_name_com.name field
|
StrColumn |
RefineHist.getPdbxPseudoAtomDetails() |
Details of pseduo atoms used to model unexplained density
|
StrColumn |
StructConn.getPdbxPtnr1AtomStereoConfig() |
The chiral configuration of the first atom making the linkage.
|
StrColumn |
StructConn.getPdbxPtnr1AuthAltId() |
A component of the identifier for partner 1 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr1LabelAltId() |
A component of the identifier for partner 1 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr1LeavingAtomId() |
The leaving atom that is removed from first atom making the linkage.
|
StrColumn |
StructConn.getPdbxPtnr1ModName() |
The abbreviation of the modifier group.
|
StrColumn |
StructConn.getPdbxPtnr1PDBInsCode() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPdbxPtnr1ReplacedAtom() |
The name of the atom which got replaced by the modifier.
|
StrColumn |
StructConn.getPdbxPtnr1StandardCompId() |
A placeholder for the standard residue name found in
the MODRES record of a PDB file.
|
StrColumn |
StructConn.getPdbxPtnr1SugarName() |
The abbreviation of the sugar modifier in the case it is a
conformer of deoxyribose or ribose.
|
StrColumn |
StructConn.getPdbxPtnr2AtomStereoConfig() |
The chiral configuration of the second atom making the linkage.
|
StrColumn |
StructConn.getPdbxPtnr2AuthAltId() |
A component of the identifier for partner 2 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr2LabelAltId() |
A component of the identifier for partner 2 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr2LeavingAtomId() |
The leaving atom that is removed from second atom making the linkage.
|
StrColumn |
StructConn.getPdbxPtnr2PDBInsCode() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthAltId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthAsymId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthAtomId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthCompId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthInsCode() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3AuthSeqId() |
A component of the identifier for partner 1 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3LabelAltId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3LabelAsymId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3LabelAtomId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3LabelCompId() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructConn.getPdbxPtnr3PDBInsCode() |
A component of the identifier for partner 3 of the
structure connection.
|
StrColumn |
StructSheetHbond.getPdbxRange1BegAuthAsymId() |
Pointer to _atom_site.auth_asym_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1BegAuthCompId() |
Pointer to _atom_site.auth_comp_id
|
StrColumn |
StructSheetHbond.getPdbxRange1BegLabelAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1BegLabelCompId() |
Pointer to _atom_site.label_comp_id
|
StrColumn |
StructSheetHbond.getPdbxRange1BegPDBInsCode() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
StructSheetHbond.getPdbxRange1EndAuthAsymId() |
Pointer to _atom_site.auth_comp_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1EndAuthCompId() |
Pointer to _atom_site.auth_comp_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1EndLabelAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1EndLabelCompId() |
Pointer to _atom_site.label_comp_id.
|
StrColumn |
StructSheetHbond.getPdbxRange1EndPDBInsCode() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
StructSheetHbond.getPdbxRange2BegLabelAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
StructSheetHbond.getPdbxRange2BegLabelCompId() |
Pointer to _atom_site.label_comp_id.
|
StrColumn |
StructSheetHbond.getPdbxRange2BegPDBInsCode() |
Pointer to _atom_site.pdbx_PDB_ins_code.
|
StrColumn |
StructSheetHbond.getPdbxRange2EndLabelAsymId() |
Pointer to _atom_site.label_asym_id.
|
StrColumn |
StructSheetHbond.getPdbxRange2EndLabelCompId() |
Pointer to _atom_site.label_comp_id.
|
StrColumn |
StructSheetHbond.getPdbxRange2EndLabelInsCode() |
Place holder for PDB insertion code.
|
StrColumn |
DatabasePDBRev.getPdbxRecordRevised1() |
The first PDB record name that was revised.
|
StrColumn |
DatabasePDBRev.getPdbxRecordRevised2() |
The second PDB record name that was revised.
|
StrColumn |
DatabasePDBRev.getPdbxRecordRevised3() |
The third PDB record name that was revised.
|
StrColumn |
DatabasePDBRev.getPdbxRecordRevised4() |
The fourth PDB record name that was revised.
|
StrColumn |
ChemCompAtom.getPdbxRefId() |
A reference to _pdbx_reference_entity_list.ref_entity_id
|
StrColumn |
PdbxRefine.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
PdbxRefineAuxFile.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
PdbxRefineTls.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
PdbxRefineTlsGroup.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
PdbxXplorFile.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
Refine.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineAnalyze.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineBIso.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineFunctMinimized.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineHist.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineLsRestr.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineLsRestrNcs.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineLsShell.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
RefineOccupancy.getPdbxRefineId() |
This data item uniquely identifies a refinement within an entry.
|
StrColumn |
Database.getPdbxRelatedCodesPDB() |
The codes of related PDB entries.
|
StrColumn |
ChemComp.getPdbxReleaseStatus() |
This data item holds the current release status for the component.
|
StrColumn |
ChemComp.getPdbxReplacedBy() |
Identifies the _chem_comp.id of the component that
has replaced this component.
|
StrColumn |
ChemComp.getPdbxReplaces() |
Identifies the _chem_comp.id's of the components
which have been replaced by this component.
|
StrColumn |
ChemComp.getPdbxReservedName() |
Previous chemical name used for this component if
a name correction has been made.
|
StrColumn |
RefineBIso.getPdbxResidueName() |
Residue name of those residues treated similarly for
isotropic B (temperature) factor refinement.
|
StrColumn |
RefineBIso.getPdbxResidueNum() |
Resiude number of residues treated similarly for
isotropic B (temperature) factor refinement.
|
StrColumn |
RefineLsRestr.getPdbxRestraintFunction() |
The functional form of the restraint function used in the least-squares
refinement.
|
StrColumn |
Refine.getPdbxRFreeSelectionDetails() |
Details of the manner in which the cross validation
reflections were selected.
|
StrColumn |
StructConn.getPdbxRole() |
The chemical or structural role of the interaction
|
StrColumn |
ExptlCrystalGrowComp.getPdbxSalt() |
The identification of the crystallization salt.
|
StrColumn |
DiffrnRadiation.getPdbxScatteringType() |
The radiation scattering type for this diffraction data set.
|
StrColumn |
EntitySrcNat.getPdbxSecretion() |
Identifies the secretion from which the molecule was isolated.
|
StrColumn |
StructRefSeq.getPdbxSeqAlignBegInsCode() |
Initial insertion code of the PDB sequence segment.
|
StrColumn |
StructRefSeq.getPdbxSeqAlignEndInsCode() |
Ending insertion code of the sequence segment
|
StrColumn |
StructRefSeqDif.getPdbxSeqDbAccessionCode() |
Sequence database accession number.
|
StrColumn |
EntityPoly.getPdbxSeqDbId() |
The identifier for this sequence in the sequence data base.
|
StrColumn |
EntityPoly.getPdbxSeqDbName() |
The name of the sequence data base containing a database entry
for this sequence.
|
StrColumn |
StructRefSeqDif.getPdbxSeqDbName() |
Sequence database name.
|
StrColumn |
StructRefSeqDif.getPdbxSeqDbSeqNum() |
Sequence database sequence number.
|
StrColumn |
EntityPoly.getPdbxSeqOneLetterCode() |
Chemical sequence expressed as string of one-letter
amino acid codes.
|
StrColumn |
StructRef.getPdbxSeqOneLetterCode() |
Database chemical sequence expressed as string of one-letter
amino acid codes.
|
StrColumn |
EntityPoly.getPdbxSeqOneLetterCodeCan() |
Cannonical chemical sequence expressed as string of
one-letter amino acid codes.
|
StrColumn |
EntityPoly.getPdbxSeqOneLetterCodeSample() |
For cases in which the sample and model sequence differ this item contains
the sample chemical sequence expressed as string of one-letter amino acid codes.
|
StrColumn |
EntityPoly.getPdbxSeqThreeLetterCode() |
Chemical sequence expressed as string of three-letter
amino acid codes.
|
StrColumn |
EntitySrcGen.getPdbxSeqType() |
This data item povides additional information about the sequence type.
|
StrColumn |
EntityPoly.getPdbxSequenceEvidenceCode() |
Evidence for the assignment of the polymer sequence.
|
StrColumn |
Diffrn.getPdbxSerialCrystalExperiment() |
Y/N if using serial crystallography experiment in which multiple crystals contribute to each diffraction frame in the experiment.
|
StrColumn |
ChemComp.getPdbxSmiles() |
SMILES code for component.
|
StrColumn |
ExptlCrystalGrowComp.getPdbxSoakSalt() |
The identification of the crystallization soaking salt.
|
StrColumn |
ExptlCrystalGrowComp.getPdbxSoakSolv() |
The identification of the crystallization soaking solvent
|
StrColumn |
ExptlCrystalGrowComp.getPdbxSolv() |
The identification of the crystallization solvent.
|
StrColumn |
DiffrnSource.getPdbxSourceSpecificBeamline() |
Beamline for synchrotron source.
|
StrColumn |
Refine.getPdbxStartingModel() |
Starting model for refinement.
|
StrColumn |
ChemComp.getPdbxStatus() |
Release status of component
|
StrColumn |
Refine.getPdbxStereochemistryTargetValues() |
Stereochemistry target values used in refinement.
|
StrColumn |
Refine.getPdbxStereochemTargetValSpecCase() |
Special case of stereochemistry target values used
in SHELXL refinement.
|
StrColumn |
ChemCompAtom.getPdbxStereoConfig() |
The chiral configuration of the atom that is a chiral center.
|
StrColumn |
ChemCompBond.getPdbxStereoConfig() |
Stereochemical configuration across a double bond.
|
StrColumn |
ChemCompAtom.getPdbxStndAtomId() |
A standard identifier for the atom.
|
StrColumn |
RefineBIso.getPdbxStrand() |
Asym chain id of residues treated similarly for
isotropic B (temperature) factor refinement.
|
StrColumn |
EntityPoly.getPdbxStrandId() |
The PDB strand/chain id(s) corresponding to this polymer entity.
|
StrColumn |
StructRefSeq.getPdbxStrandId() |
The PDB strand/chain ID .
|
StrColumn |
AtomSite.getPdbxStructGroupId() |
The value of _atom_site.pdbx_struct_group_id identifies the group or groups
assigned to this atom.
|
StrColumn |
Computing.getPdbxStructureRefinementMethod() |
Program/package name for structure refinement method.
|
StrColumn |
ChemComp.getPdbxSubcomponentList() |
The list of subcomponents contained in this component.
|
StrColumn |
DiffrnSource.getPdbxSynchrotronBeamline() |
Synchrotron beamline.
|
StrColumn |
DiffrnSource.getPdbxSynchrotronSite() |
Synchrotron site.
|
StrColumn |
DiffrnSource.getPdbxSynchrotronYN() |
Yes/No if synchrotron source was used or not.
|
StrColumn |
ChemComp.getPdbxSynonyms() |
Synonym list for the component.
|
StrColumn |
Entity.getPdbxTargetId() |
The value of _entity.target_id points to a TARGETDB target idenitifier
from which this entity was generated.
|
StrColumn |
EntityPoly.getPdbxTargetIdentifier() |
For Structural Genomics entries, the sequence's target identifier registered at the TargetTrack database.
|
StrColumn |
PhasingSet.getPdbxTempDetails() |
The value of _phasing_set.pdbx_temp_details describes any
special details about the data collection temperature
for this phasing data set.
|
StrColumn |
Struct.getPdbxTitleText() |
A title for the experiment or analysis that is represented in
the entry.
|
StrColumn |
AtomSite.getPdbxTlsGroupId() |
The TLS group to which the atom position is assigned.
|
StrColumn |
Refine.getPdbxTLSResidualADPFlag() |
A flag for TLS refinements identifying the type of atomic displacement parameters stored
in _atom_site.B_iso_or_equiv.
|
StrColumn |
ChemComp.getPdbxType() |
A preliminary classification used by PDB.
|
StrColumn |
RefineLsRestrNcs.getPdbxType() |
The type of NCS restraint.
|
StrColumn |
StructAsym.getPdbxType() |
This data item describes the general type of the structural elements
in the ATOM_SITE category.
|
StrColumn |
Cell.getPdbxUniqueAxis() |
To further identify unique axis if necessary.
|
StrColumn |
StructConn.getPdbxValueOrder() |
The chemical bond order associated with the specified atoms in
this contact.
|
StrColumn |
EntitySrcNat.getPdbxVariant() |
Identifies the variant.
|
StrColumn |
DiffrnRadiation.getPdbxWavelength() |
Wavelength of radiation.
|
StrColumn |
DiffrnSource.getPdbxWavelength() |
Wavelength of radiation.
|
StrColumn |
DiffrnRadiation.getPdbxWavelengthList() |
Comma separated list of wavelengths or wavelength range.
|
StrColumn |
DiffrnSource.getPdbxWavelengthList() |
Comma separated list of wavelengths or wavelength range.
|
StrColumn |
ExptlCrystal.getPdbxX_rayImage() |
A code to indicate that an x-ray image is available for
this crystal.
|
StrColumn |
ExptlCrystal.getPdbxX_rayImageType() |
A description of the type of x-ray image for this crystal.
|
StrColumn |
PdbxNmrExptlSampleConditions.getPH() |
The pH at which the NMR data were collected.
|
StrColumn |
Reflns.getPhaseCalculationDetails() |
The value of _reflns.phase_calculation_details describes a
special details about calculation of phases in _refln.phase_calc.
|
StrColumn |
EmDiffractionStats.getPhaseErrorRejectionCriteria() |
Criteria used to reject phases
|
StrColumn |
EmImagingOptics.getPhasePlate() |
Phase plate information
|
StrColumn |
EmCtfCorrection.getPhaseReversal() |
Yes if Phase reversal (flipping) was performed
|
StrColumn |
EmCtfCorrection.getPhaseReversalAnisotropic() |
Yes if Anisotropic phase reversal (flipping) was performed
|
StrColumn |
EmCtfCorrection.getPhaseReversalCorrectionSpace() |
CTF phase reversal correction space
|
StrColumn |
AuditContactAuthor.getPhone() |
The telephone number of the author of the data block to whom
correspondence should be addressed.
|
StrColumn |
PdbxContactAuthor.getPhone() |
The telephone number of the author of the data block to whom
correspondence should be addressed.
|
StrColumn |
PdbxNmrChemShiftReference.getPhosphorusShiftsFlag() |
A value indicating if 31P chemical shifts are being deposited and if IUPAC chemical shift referencing was used.
|
StrColumn |
PdbxNmrExptlSampleConditions.getPHUnits() |
Units for the value of the sample condition pH.
|
StrColumn |
ChemCompPlaneAtom.getPlaneId() |
This data item is a pointer to _chem_comp_plane.id in the
CHEM_COMP_PLANE category.
|
StrColumn |
ChemLinkPlaneAtom.getPlaneId() |
This data item is a pointer to _chem_link_plane.id in the
CHEM_LINK_PLANE category.
|
StrColumn |
IhmGeometricObjectPlane.getPlaneType() |
The type of plane.
|
StrColumn |
EmEntityAssemblyRecombinant.getPlasmid() |
The plasmid used to produce the component in the expression system.
|
StrColumn |
EntitySrcGen.getPlasmidDetails() |
A description of special aspects of the plasmid that produced the
entity in the host organism.
|
StrColumn |
PdbxEntitySrcGenExpress.getPlasmidId() |
This item is a pointer to _pdbx_construct.id in the
PDBX_CONSTRUCT category.
|
StrColumn |
EntitySrcGen.getPlasmidName() |
The name of the plasmid that produced the entity in the host
organism.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getPlasmidName() |
The name of the plasmid that produced the entity in the host
organism.
|
StrColumn |
StructNcsEns.getPointGroup() |
The point group of the ensemble of structural elements related by
one or more noncrystallographic symmetry operations.
|
StrColumn |
EmSingleParticleEntity.getPointSymmetry() |
Point symmetry symbol, either Cn, Dn, T, O, or I
|
StrColumn |
PdbxUnobsOrZeroOccAtoms.getPolymerFlag() |
The value of polymer flag indicates whether the unobserved or zero
occupancy atom is part of a polymer chain
|
StrColumn |
PdbxUnobsOrZeroOccResidues.getPolymerFlag() |
The value of polymer flag indicates whether the unobserved or
zero occupancy residue is part of a polymer chain or not
|
StrColumn |
SymmetryEquiv.getPosAsXyz() |
Symmetry-equivalent position in the 'xyz' representation.
|
StrColumn |
PdbxContactAuthor.getPostalCode() |
The mailing address of the author of the data block to whom
correspondence should be addressed, zip code.
|
StrColumn |
PdbxDatabaseStatus.getPostRelRecvdCoord() |
For author initiated replacement, indicates if new coordinates have been provided
|
StrColumn |
PdbxDatabaseStatus.getPostRelRecvdCoordDate() |
For author initiated replacement, date new coordinates have been provided
|
StrColumn |
PdbxDepuiStatusFlags.getPostRelReplacementReason() |
Records reason for author initiated coordinate replacement
|
StrColumn |
PdbxDepuiStatusFlags.getPostRelReplacementReasonDetails() |
Records additional details for author initiated coordinate replacement
|
StrColumn |
PdbxDatabaseStatus.getPostRelStatus() |
For author initiated replacement, the current status of the replacement entry
|
StrColumn |
PdbxEntitySrcGenChrom.getPostTreatment() |
Details of any post-chromatographic treatment of the protein sample.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getPowerBy() |
Sample deliver driving force, e.g.
|
StrColumn |
PdbxLinkedEntity.getPrdId() |
The identifier used by the PDB corresponding to the chemical definition
for the molecule.
|
StrColumn |
PdbxMolecule.getPrdId() |
The value of _pdbx_molecule.prd_id is the PDB accession code for this
reference molecule.
|
StrColumn |
PdbxMoleculeFeatures.getPrdId() |
The value of _pdbx_molecule_features.prd_id is the PDB accession code for this
reference molecule.
|
StrColumn |
PdbxPrdAudit.getPrdId() |
This data item is a pointer to _pdbx_reference_molecule.prd_id in the
pdbx_reference_molecule category.
|
StrColumn |
PdbxReferenceEntityLink.getPrdId() |
The value of _pdbx_reference_entity_link.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityList.getPrdId() |
The value of _pdbx_reference_entity_list.prd_id is a reference
_pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxReferenceEntityNonpoly.getPrdId() |
The value of _pdbx_reference_entity_nonpoly.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityPoly.getPrdId() |
The value of _pdbx_reference_entity_poly.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityPolyLink.getPrdId() |
The value of _pdbx_reference_entity_poly_link.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_POLY category.
|
StrColumn |
PdbxReferenceEntityPolySeq.getPrdId() |
The value of _pdbx_reference_entity_poly_seq.prd_id is a reference
_pdbx_reference_entity_poly.prd_id in the PDBX_REFERENCE_ENTITY_POLY category.
|
StrColumn |
PdbxReferenceEntitySequence.getPrdId() |
The value of _pdbx_reference_entity_sequence.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntitySrcNat.getPrdId() |
The value of _pdbx_reference_entity_src_nat.prd_id is a reference
_pdbx_reference_entity_list.prd_id in the PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntitySubcomponents.getPrdId() |
The value of _pdbx_reference_entity_subcomponents.prd_id is a reference
_pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxReferenceMolecule.getPrdId() |
The value of _pdbx_reference_molecule.prd_id is the unique identifier
for the reference molecule in this family.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getPrdId() |
This data item is a pointer to _pdbx_reference_molecule.prd_id in the
PDB_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxReferenceMoleculeDetails.getPrdId() |
The value of _pdbx_reference_molecule_details.prd_id is a reference to
_pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxReferenceMoleculeFeatures.getPrdId() |
The value of _pdbx_reference_molecule_features.prd_id is a reference
_pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxReferenceMoleculeList.getPrdId() |
The value of _pdbx_reference_molecule_list.prd_id is the unique identifier
for the reference molecule in this family.
|
StrColumn |
PdbxReferenceMoleculeSynonyms.getPrdId() |
The value of _pdbx_reference_molecule_synonyms.prd_id is a reference
_pdbx_reference_molecule.prd_id in the PDBX_REFERENCE_MOLECULE category.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreAuthAltId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPreAuthAltId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreAuthAsymId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPreAuthAsymId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreAuthAtomId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPreAuthAtomId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreAuthCompId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPreAuthCompId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreAuthSeqId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPreAuthSeqId() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxDepuiStatusFlags.getPredictionTarget() |
A flag to indicate that this entry is a candidate prediction target.
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPreGroupPDB() |
A component of the prior atom_site identifier.
|
StrColumn |
ExptlCrystal.getPreparation() |
Details of crystal growth and preparation of the crystal (e.g.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryInjection.getPreparation() |
Details of crystal growth and preparation of the crystals
|
StrColumn |
PdbxRemediationAtomSiteMapping.getPrePDBInsCode() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxSolventAtomSiteMapping.getPrePDBInsCode() |
A component of the prior atom_site identifier.
|
StrColumn |
PdbxNmrExptlSampleConditions.getPressure() |
The pressure at which NMR data were collected.
|
StrColumn |
PdbxNmrExptlSampleConditions.getPressureUnits() |
The units of pressure at which NMR data were collected.
|
StrColumn |
EmSampleSupport.getPretreatment() |
A description of the grid plus support film pretreatment.
|
StrColumn |
PdbxDepuiStatusFlags.getPrimaryCitationStatus() |
A flag to indicate status about primary citation data.
|
StrColumn |
DiffrnRadiation.getProbe() |
The nature of the radiation used (i.e.
|
StrColumn |
IhmProbeList.getProbeLinkType() |
The type of link between the probe and the biomolecule.
|
StrColumn |
IhmProbeList.getProbeName() |
Author provided name for the probe.
|
StrColumn |
IhmProbeList.getProbeOrigin() |
The origin of the probe.
|
StrColumn |
IhmOrderedEnsemble.getProcessDescription() |
Description of the ordered process.
|
StrColumn |
PdbxNmrComputing.getProcessing() |
Enter the name of the software used for data processing.
|
StrColumn |
PdbxDataProcessingDetector.getProcessingFiles() |
File system names for the data processing files.
|
StrColumn |
PdbxDataProcessingDetector.getProcessingPath() |
File system path to processing data files.
|
StrColumn |
PdbxChemCompAudit.getProcessingSite() |
An identifier for the wwPDB site creating or modifying the component.
|
StrColumn |
PdbxChemCompModelAudit.getProcessingSite() |
An identifier for the wwPDB site creating or modifying the component.
|
StrColumn |
PdbxFamilyPrdAudit.getProcessingSite() |
An identifier for the wwPDB site creating or modifying the family.
|
StrColumn |
PdbxPrdAudit.getProcessingSite() |
An identifier for the wwPDB site creating or modifying the molecule.
|
StrColumn |
PdbxNmrComputing.getProcessingVersion() |
Enter the version of the software used for data processing.
|
StrColumn |
PdbxEntitySrcGenProdOther.getProcessName() |
Name of this process step.
|
StrColumn |
PdbxDatabaseStatus.getProcessSite() |
The site where the file was deposited.
|
StrColumn |
PdbxEntitySrcGenPure.getProductId() |
When present, this item should be a globally unique identifier
that identifies the final product.
|
StrColumn |
IhmSasRestraint.getProfileSegmentFlag() |
A flag that indicates whether or not the SAS profile is segmented i.e.,
whether the whole SAS profile is used or only a portion of it is used
(by masking or by other means) as restraint in the modeling.
|
StrColumn |
PdbxChemCompDescriptor.getProgram() |
This data item contains the name of the program
or library used to compute the descriptor.
|
StrColumn |
PdbxChemCompIdentifier.getProgram() |
This data item contains the name of the program
or library used to compute the identifier.
|
StrColumn |
PdbxDccDensityCorr.getProgram() |
The program used to calculate the metrics in this category.
|
StrColumn |
PdbxEntityBranchDescriptor.getProgram() |
This data item contains the name of the program
or library used to compute the descriptor.
|
StrColumn |
PdbxChemCompDescriptor.getProgramVersion() |
This data item contains the version of the program
or library used to compute the descriptor.
|
StrColumn |
PdbxChemCompIdentifier.getProgramVersion() |
This data item contains the version of the program
or library used to compute the identifier.
|
StrColumn |
PdbxEntityBranchDescriptor.getProgramVersion() |
This data item contains the version of the program
or library used to compute the descriptor.
|
StrColumn |
PdbxSGProject.getProjectName() |
The value identifies the Structural Genomics project.
|
StrColumn |
EmEulerAngleAssignment.getProjMatchingMeritFunction() |
Overall figure of merit for projection matching
|
StrColumn |
PdbxEntitySrcGenExpress.getPromoterType() |
The nature of the promoter controlling expression of the gene.
|
StrColumn |
Chemical.getPropertiesBiological() |
A free-text description of the biological properties of the
material.
|
StrColumn |
Chemical.getPropertiesPhysical() |
A free-text description of the physical properties of the material.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getProtease() |
The name of the protease used for cleavage.
|
StrColumn |
PdbxEntityFuncBindMode.getProteinBindsTo() |
This data item identifies the type of oligonucleotide to which
the protein binds.
|
StrColumn |
PdbxSolnScatter.getProteinLength() |
The length (or range) of the protein sample under study.
|
StrColumn |
PdbxEntitySrcGenFract.getProteinLocation() |
The fraction containing the protein of interest.
|
StrColumn |
PdbxEntitySrcGenFract.getProteinYieldMethod() |
The method used to determine the yield
|
StrColumn |
PdbxEntityProdProtocol.getProtocol() |
The protocol description associated with the protocol_type employed
in the production of this entity.
|
StrColumn |
IhmModelingProtocol.getProtocolName() |
The name for the modeling protocol.
|
StrColumn |
PdbxEntityProdProtocol.getProtocolType() |
The one of a set of protocol types associated with the production
of this entity.
|
StrColumn |
PdbxNmrChemShiftReference.getProtonShiftsFlag() |
A value indicating if 1H chemical shifts are being deposited and if IUPAC chemical shift referencing was used.
|
StrColumn |
PdbxChemCompSynonyms.getProvenance() |
The provenance of this synonym.
|
StrColumn |
PdbxAuditRevisionDetails.getProvider() |
The provider of the revision.
|
StrColumn |
IhmCrossLinkRestraint.getPseudoSiteFlag() |
A flag indicating if the cross link involves a pseudo site that is
not part of the model representation and hence will not be part
of the model.
|
StrColumn |
PdbxStructConnAngle.getPtnr1AuthAltId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr1AuthAsymId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
StructConn.getPtnr1AuthAsymId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1AuthAtomId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
StructConn.getPtnr1AuthAtomId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1AuthCompId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
StructConn.getPtnr1AuthCompId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1AuthSeqId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr1LabelAltId() |
A component of the identifier for partner 1 of the structure
angle.
|
StrColumn |
PdbxStructLink.getPtnr1LabelAltId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPtnr1LabelAltId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1LabelAsymId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr1LabelAsymId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPtnr1LabelAsymId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1LabelAtomId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr1LabelAtomId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPtnr1LabelAtomId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1LabelCompId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr1LabelCompId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
StructConn.getPtnr1LabelCompId() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructLink.getPtnr1LabelInsCode() |
A component of the identifier for partner 1 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1PDBInsCode() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
StructConn.getPtnr1Role() |
The chemical or structural role of the first partner in
the structure connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr1Symmetry() |
Describes the symmetry operation that should be applied to the
atom specified by _pdbx_struct_conn_angle.ptnr1_label* to generate the
first partner in the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr1Symmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _pdbx_struct_link.ptnr1_label* to generate the
first partner in the structure connection.
|
StrColumn |
StructConn.getPtnr1Symmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _struct_conn.ptnr1_label* to generate the
first partner in the structure connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2AuthAltId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr2AuthAsymId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
StructConn.getPtnr2AuthAsymId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2AuthAtomId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
StructConn.getPtnr2AuthAtomId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2AuthCompId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
StructConn.getPtnr2AuthCompId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2AuthSeqId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr2LabelAltId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr2LabelAltId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
StructConn.getPtnr2LabelAltId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2LabelAsymId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr2LabelAsymId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
StructConn.getPtnr2LabelAsymId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2LabelAtomId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr2LabelAtomId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
StructConn.getPtnr2LabelAtomId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2LabelCompId() |
A component of the identifier for partner 2 of the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr2LabelCompId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
StructConn.getPtnr2LabelCompId() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructLink.getPtnr2LabelInsCode() |
A component of the identifier for partner 2 of the structure
connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2PDBInsCode() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
StructConn.getPtnr2Role() |
The chemical or structural role of the second partner in
the structure connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr2Symmetry() |
Describes the symmetry operation that should be applied to the
atom specified by _pdbx_struct_conn_angle.ptnr2_label* to generate the
second partner in the structure angle.
|
StrColumn |
PdbxStructLink.getPtnr2Symmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _pdbx_struct_link.ptnr2_label* to generate the
second partner in the structure connection.
|
StrColumn |
StructConn.getPtnr2Symmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _struct_conn.ptnr2_label* to generate the
second partner in the structure connection.
|
StrColumn |
PdbxStructConnAngle.getPtnr3AuthAltId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3AuthAsymId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3AuthAtomId() |
A component of the identifier for partner 3 of the
structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3AuthCompId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3AuthSeqId() |
A component of the identifier for partner 1 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3LabelAltId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3LabelAsymId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3LabelAtomId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3LabelCompId() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3PDBInsCode() |
A component of the identifier for partner 3 of the structure angle.
|
StrColumn |
PdbxStructConnAngle.getPtnr3Symmetry() |
Describes the symmetry operation that should be applied to the
atom specified by _pdbx_struct_conn_angle.ptnr3_label* to generate the
first partner in the structure angle.
|
StrColumn |
GeomAngle.getPublFlag() |
This code signals whether the angle is referred to in a
publication or should be placed in a table of significant angles.
|
StrColumn |
GeomBond.getPublFlag() |
This code signals whether the bond distance is referred to in a
publication or should be placed in a list of significant bond
distances.
|
StrColumn |
GeomContact.getPublFlag() |
This code signals whether the contact distance is referred to
in a publication or should be placed in a list of significant
contact distances.
|
StrColumn |
GeomHbond.getPublFlag() |
This code signals whether the hydrogen-bond information is
referred to in a publication or should be placed in a table of
significant hydrogen-bond geometry.
|
StrColumn |
GeomTorsion.getPublFlag() |
This code signals whether the torsion angle is referred to in a
publication or should be placed in a table of significant
torsion angles.
|
StrColumn |
PdbxReferencePublicationList.getPublicationAbbrev() |
Abbreviated name of the reference publication.
|
StrColumn |
Computing.getPublicationMaterial() |
Software used for generating material for publication.
|
StrColumn |
PdbxEntitySrcGenClone.getPurificationDetails() |
Details of any purification of the product.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getPurificationDetails() |
String value containing details of any purification of the
product of the digestion.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getPurificationDetails() |
String value containing details of any purification of the
product of the PCR reaction.
|
StrColumn |
PdbxDccMap.getQualityIndicator() |
The value indicates any problems with this group of atoms.
|
StrColumn |
CellMeasurement.getRadiation() |
Description of the radiation used to measure the unit-cell data.
|
StrColumn |
PhasingSet.getRadiationSourceSpecific() |
The particular source of radiation.
|
StrColumn |
PdbxStructSheetHbond.getRange1AuthAsymId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1AuthAtomId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1AuthCompId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1AuthSeqId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
StructSheetHbond.getRange1BegAuthAtomId() |
A component of the identifier for the residue for the first
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange1BegAuthSeqId() |
A component of the identifier for the residue for the first
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange1BegLabelAtomId() |
A component of the identifier for the residue for the first
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange1EndAuthAtomId() |
A component of the identifier for the residue for the first
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
StructSheetHbond.getRange1EndAuthSeqId() |
A component of the identifier for the residue for the first
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
StructSheetHbond.getRange1EndLabelAtomId() |
A component of the identifier for the residue for the first
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1LabelAsymId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1LabelAtomId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1LabelCompId() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange1PDBInsCode() |
A component of the residue identifier for the first partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2AuthAsymId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2AuthAtomId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2AuthCompId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2AuthSeqId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
StructSheetHbond.getRange2BegAuthAtomId() |
A component of the identifier for the residue for the second
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange2BegAuthSeqId() |
A component of the identifier for the residue for the second
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange2BegLabelAtomId() |
A component of the identifier for the residue for the second
partner of the first hydrogen bond between two residue ranges
in a sheet.
|
StrColumn |
StructSheetHbond.getRange2EndAuthAtomId() |
A component of the identifier for the residue for the second
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
StructSheetHbond.getRange2EndAuthSeqId() |
A component of the identifier for the residue for the second
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
StructSheetHbond.getRange2EndLabelAtomId() |
A component of the identifier for the residue for the second
partner of the last hydrogen bond between two residue ranges in
a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2LabelAsymId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2LabelAtomId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2LabelCompId() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRange2PDBInsCode() |
A component of the residue identifier for the second partner of the
registration hydrogen bond between two residue ranges in a sheet.
|
StrColumn |
PdbxStructSheetHbond.getRangeId1() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetHbond.getRangeId1() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetOrder.getRangeId1() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetTopology.getRangeId1() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
PdbxStructSheetHbond.getRangeId2() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetHbond.getRangeId2() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetOrder.getRangeId2() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
StructSheetTopology.getRangeId2() |
This data item is a pointer to _struct_sheet_range.id in
the STRUCT_SHEET_RANGE category.
|
StrColumn |
PdbxNmrChemShiftRef.getRank() |
The rank of the chemical shift reference.
|
StrColumn |
PdbxDatabaseStatus.getRcsbAnnotator() |
The initials of the annotator processing this entry.
|
StrColumn |
PdbxEntityNameInstance.getRcsbId() |
This data item holds a RCSB ID code.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getReactionDetails() |
String value containing details of the PCR reaction.
|
StrColumn |
IhmProbeList.getReactiveProbeFlag() |
Indicate whether the probe has a reactive form.
|
StrColumn |
IhmProbeList.getReactiveProbeName() |
Author provided name for the reactive_probe, if applicable.
|
StrColumn |
IhmResiduesNotModeled.getReason() |
The reason why the residues are missing in the structural model.
|
StrColumn |
PdbxStructAssemblyAuthClassification.getReasonForInterest() |
Provides the reason that a particular assembly is being studied
|
StrColumn |
PdbxDatabaseMessage.getReceiver() |
The name of the receiver.
|
StrColumn |
PdbxDatabaseMessage.getReceiverAddressEmail() |
The email address of the receiver.
|
StrColumn |
PdbxDatabaseMessage.getReceiverAddressFax() |
The FAX phone number of the receiver.
|
StrColumn |
PdbxDatabaseMessage.getReceiverAddressMail() |
The postal address of the receiver.
|
StrColumn |
PdbxDatabaseMessage.getReceiverAddressPhone() |
The phone number of the receiver.
|
StrColumn |
PdbxEntitySrcGenCloneRecombination.getRecombinationEnzymes() |
The names of the enzymes used for this recombination step.
|
StrColumn |
EmExperiment.getReconstructionMethod() |
The reconstruction method used in the EM experiment.
|
StrColumn |
PdbxDatabasePdbOmit.getRecordName() |
PDB record or REMARK name to be omitted.
|
StrColumn |
PdbxDatabaseStatus.getRecvdAuthorApproval() |
This code indicates whether the author's approval for
an entry has been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdChemicalShifts() |
This code indicates whether the chemical shift data for an entry
have been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdCoordinates() |
This code indicates whether the coordinates for an entry
have been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdDepositForm() |
This code indicates whether the deposition form for an entry
has been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdInitialDepositionDate() |
The date of initial deposition.
|
StrColumn |
PdbxDatabaseStatus.getRecvdInternalApproval() |
This code indicates whether the internal approval for an entry
have been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdManuscript() |
This code indicates whether the manuscript for an entry
has been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdNmrConstraints() |
This code indicates whether the NMR contraint data for an entry
have been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdNmrData() |
This code indicates whether the unified NMR data for an entry
have been received.
|
StrColumn |
PdbxDatabaseStatus.getRecvdStructFact() |
This code indicates whether the structure factors for an entry
have been received.
|
StrColumn |
DiffrnReflns.getReductionProcess() |
A description of the process used to reduce the intensity data
into structure-factor magnitudes.
|
StrColumn |
PdbxNmrChemShiftRef.getRefCorrectionType() |
If a correction value is applied to calculate the reported chemical shifts
the source of the correction (pH; temperature; etc.).
|
StrColumn |
PdbxReferenceEntityList.getRefEntityId() |
The value of _pdbx_reference_entity_list.ref_entity_id is a unique identifier
the a constituent entity within this reference molecule.
|
StrColumn |
PdbxReferenceEntityNonpoly.getRefEntityId() |
The value of _pdbx_reference_entity_nonpoly.ref_entity_id is a reference
to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityPoly.getRefEntityId() |
The value of _pdbx_reference_entity_poly.ref_entity_id is a reference
to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityPolyLink.getRefEntityId() |
The reference entity id of the polymer entity containing the linkage.
|
StrColumn |
PdbxReferenceEntityPolySeq.getRefEntityId() |
The value of _pdbx_reference_entity_poly_seq.ref_entity_id is a reference
to _pdbx_reference_entity_poly.ref_entity_id in PDBX_REFERENCE_ENTITY_POLY category.
|
StrColumn |
PdbxReferenceEntitySequence.getRefEntityId() |
The value of _pdbx_reference_entity_sequence.ref_entity_id is a reference
to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntitySrcNat.getRefEntityId() |
The value of _pdbx_reference_entity_src_nat.ref_entity_id is a reference
to _pdbx_reference_entity_list.ref_entity_id in PDBX_REFERENCE_ENTITY_LIST category.
|
StrColumn |
PdbxReferenceEntityLink.getRefEntityId1() |
The reference entity id of the first of the two entities joined by the
linkage.
|
StrColumn |
PdbxReferenceEntityLink.getRefEntityId2() |
The reference entity id of the second of the two entities joined by the
linkage.
|
StrColumn |
IhmExternalReferenceInfo.getReference() |
The external reference or the Digital Object Identifier (DOI).
|
StrColumn |
StructConfType.getReference() |
A literature reference that defines the criteria used to assign
this conformation type and subtype.
|
StrColumn |
StructConnType.getReference() |
A reference that specifies the criteria used to define the
interaction.
|
StrColumn |
ValenceRef.getReference() |
Literature reference from which the valence parameters
identified by _valence_param.id were taken.
|
StrColumn |
PdbxDepuiStatusFlags.getReferenceCitationStatus() |
A flag to indicate status about reference citation data.
|
StrColumn |
EmParticleSelection.getReferenceModel() |
Description of reference model used for particle selection
|
StrColumn |
EmVolumeSelection.getReferenceModel() |
Description of reference model used for volume selection
|
StrColumn |
IhmExternalReferenceInfo.getReferenceProvider() |
The name of the reference provider.
|
StrColumn |
IhmExternalReferenceInfo.getReferenceType() |
The type of external reference.
|
StrColumn |
IhmExternalReferenceInfo.getRefersTo() |
The type of object that the external reference points to, usually
a single file or an archive.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getRefId() |
This data item is a unique identifier for reference sequence information.
|
StrColumn |
PdbxStructRefSeqDifDepositorInfo.getRefId() |
This data item is a pointer to _struct_ref_seq.ref_id in
the STRUCT_REF_SEQ_DEPOSITOR_INFO category.
|
StrColumn |
StructRefSeq.getRefId() |
This data item is a pointer to _struct_ref.id in the
STRUCT_REF category.
|
StrColumn |
ValenceParam.getRefId() |
An identifier which links to the reference to the source
from which the bond-valence parameters are taken.
|
StrColumn |
PdbxNmrComputing.getRefinement() |
Enter the name of the software used for refinement.
|
StrColumn |
AtomSite.getRefinementFlags() |
A concatenated series of single-letter codes which indicate the
refinement restraints or constraints applied to this site.
|
StrColumn |
AtomSite.getRefinementFlagsAdp() |
A code which indicates the refinement restraints or constraints
applied to the atomic displacement parameters of this site.
|
StrColumn |
AtomSite.getRefinementFlagsOccupancy() |
A code which indicates that refinement restraints or
constraints were applied to the occupancy of this site.
|
StrColumn |
AtomSite.getRefinementFlagsPosn() |
A code which indicates the refinement restraints or constraints
applied to the positional coordinates of this site.
|
StrColumn |
Refln.getRefinementStatus() |
Status of a reflection in the structure-refinement process.
|
StrColumn |
Em3dReconstruction.getRefinementType() |
type of refinement performed in order to determine map resolution
|
StrColumn |
PdbxNmrComputing.getRefinementVersion() |
Enter the version of the software used for refinement.
|
StrColumn |
PdbxRefineTlsGroup.getRefineTlsId() |
This data item is a pointer to _pdbx_refine_tls.id in the
REFINE_TLS category.
|
StrColumn |
PdbxDccDensity.getReflectionStatusArchived() |
Whether the status is of reflection is archived (Y) or not (N).
|
StrColumn |
PdbxDccDensity.getReflectionStatusUsed() |
Whether the status of the reflection is used (Y) or not (N).
|
StrColumn |
PhasingMIRDer.getReflnsCriteria() |
Criteria used to limit the reflections used in the phasing
calculations.
|
StrColumn |
PhasingMIR.getReflnsCriterion() |
Criterion used to limit the reflections used in the phasing
calculations.
|
StrColumn |
PdbxDccDensity.getReflnsTwin() |
Boolean (Y/N) whether the twin is reported.
|
StrColumn |
PdbxNmrChemShiftRef.getRefMethod() |
The chemical shift reference may be either internal (the compound is located
in the sample) or external (the compound is in a container external to the sample).
|
StrColumn |
PdbxEntitySrcGenRefold.getRefoldBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
Em3dFitting.getRefProtocol() |
The refinement protocol used.
|
StrColumn |
Em3dFitting.getRefSpace() |
A flag to indicate whether fitting was carried out in real
or reciprocal refinement space.
|
StrColumn |
PdbxNmrChemShiftRef.getRefType() |
The reference type may be either direct (against a value measured with
a chemical compound) or indirect (calculated from chemical shift ratios).
|
StrColumn |
PdbxChemCompAtomRelated.getRelatedAtomId() |
The atom identifier/name for the atom mapping in the related chemical component
|
StrColumn |
PdbxChemCompAtomRelated.getRelatedCompId() |
The related chemical component for which this chemical component is based.
|
StrColumn |
PdbxChemCompRelated.getRelatedCompId() |
The related chemical component for which this chemical component is based.
|
StrColumn |
PdbxDepuiEntryDetails.getRelatedDatabaseCode() |
A database code closely related to the current deposition.
|
StrColumn |
PdbxDepuiEntryDetails.getRelatedDatabaseName() |
The name of the database associated with the related database code.
|
StrColumn |
PdbxChemCompAtomRelated.getRelatedType() |
Describes the type of relationship
|
StrColumn |
EmDbReference.getRelationship() |
Indicates relationship of this entry with other entries in PDB and EMDB.
|
StrColumn |
PdbxChemCompRelated.getRelationshipType() |
Describes the type of relationship
|
StrColumn |
PdbxReferenceMolecule.getReleaseStatus() |
Defines the current PDB release status for this molecule definition.
|
StrColumn |
PdbxReferenceMoleculeFamily.getReleaseStatus() |
Assigns the current PDB release status for this family.
|
StrColumn |
IhmPolyResidueFeature.getRepAtom() |
If _ihm_poly_residue_feature.granularity is by-residue, then indicate the atom used to represent
the residue in three-dimension.
|
StrColumn |
IhmPredictedContactRestraint.getRepAtom1() |
If _ihm_predicted_contact_restraint.model_granularity is by-residue, then indicate the atom
used to represent the first monomer partner in three-dimension.
|
StrColumn |
IhmPredictedContactRestraint.getRepAtom2() |
If _ihm_predicted_contact_restraint.model_granularity is by-residue, then indicate the atom
used to represent the second monomer partner in three-dimension.
|
StrColumn |
DatabasePDBRev.getReplacedBy() |
The PDB code for a subsequent PDB entry that replaced the
PDB file corresponding to this data block.
|
StrColumn |
PdbxReferenceMolecule.getReplacedBy() |
Assigns the identifier of the reference molecule that has replaced this molecule.
|
StrColumn |
PdbxReferenceMoleculeFamily.getReplacedBy() |
Assigns the identifier of the family that has replaced this component.
|
StrColumn |
PdbxDatabaseStatus.getReplacedEntryId() |
The NDB ID that this entry replaced.
|
StrColumn |
EmAdmin.getReplaceExistingEntryFlag() |
This item indicates that the current entry replaced a previously released structure.
|
StrColumn |
PdbxDatabasePDBObsSpr.getReplacePdbId() |
The PDB identifier for the replaced (OLD) entry/entries.
|
StrColumn |
PdbxDepuiEntryDetails.getReplacePdbId() |
The PDB ID code of the entry that is superseded by this entry.
|
StrColumn |
DatabasePDBRev.getReplaces() |
The PDB code for a previous PDB entry that was replaced by
the PDB file corresponding to this data block.
|
StrColumn |
PdbxReferenceMolecule.getReplaces() |
Assigns the identifier for the reference molecule which have been replaced
by this reference molecule.
|
StrColumn |
PdbxReferenceMoleculeFamily.getReplaces() |
Assigns the identifier for the family which have been replaced by this family.
|
StrColumn |
PdbxReferenceMolecule.getRepresentAs() |
Defines how this entity is represented in PDB data files.
|
StrColumn |
PdbxReferenceMolecule.getRepresentativePDBIdCode() |
The PDB accession code for the entry containing a representative example of this molecule.
|
StrColumn |
PdbxDepuiEntryDetails.getRequestedAccessionTypes() |
Comma separated list of requested accession code types.
|
StrColumn |
Publ.getRequestedCategory() |
The category of paper submitted.
|
StrColumn |
Publ.getRequestedCoeditorName() |
The name of the co-editor whom the authors would like to
handle the submitted manuscript.
|
StrColumn |
Publ.getRequestedJournal() |
The name of the journal to which the manuscript is being
submitted.
|
StrColumn |
PdbxDepuiValidationStatusFlags.getResidualBFactorsFlag() |
A flag to indicate if the uploaded data is contains residual B-values
|
StrColumn |
PdbxUnpair.getResidueName() |
Name of residue which does not pair.
|
StrColumn |
PdbxHybrid.getResidueNames() |
List of residues + number (see example) which have the same sugar
group in a particular strand.
|
StrColumn |
PdbxUnpair.getResidueNumber() |
Number of residue which does not pair.
|
StrColumn |
IhmPolyResidueFeature.getResidueRangeGranularity() |
The coarse-graining information, if the feature is a residue range.
|
StrColumn |
PdbxConnect.getResName() |
Unique (typically 3-letter code) identifier for chemical group.
|
StrColumn |
PdbxConnectAtom.getResName() |
Unique (typically 3-letter code) identifier for chemical group.
|
StrColumn |
PdbxConnectModification.getResName() |
Unique (typically 3-letter code) identifier for chemical group.
|
StrColumn |
PdbxConnectType.getResName() |
Unique (typically 3-letter code) identifier for chemical group.
|
StrColumn |
Em3dReconstruction.getResolutionMethod() |
The method used to determine the final resolution
of the 3d reconstruction.
|
StrColumn |
PdbxDataProcessingCell.getResolutionRange() |
Resolution range.
|
StrColumn |
AtomSite.getRestraints() |
A description of restraints applied to specific parameters at
this site during refinement.
|
StrColumn |
IhmCrossLinkRestraint.getRestraintType() |
The type of the cross link restraint applied.
|
StrColumn |
IhmDerivedAngleRestraint.getRestraintType() |
The type of angle restraint applied.
|
StrColumn |
IhmDerivedDihedralRestraint.getRestraintType() |
The type of dihedral restraint applied.
|
StrColumn |
IhmDerivedDistanceRestraint.getRestraintType() |
The type of distance restraint applied.
|
StrColumn |
IhmGeometricObjectDistanceRestraint.getRestraintType() |
The type of restraint applied.
|
StrColumn |
IhmPredictedContactRestraint.getRestraintType() |
The type of distance restraint applied.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getRestrictionEnzyme1() |
The first enzyme used in the restriction digestion.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getRestrictionEnzyme2() |
The second enzyme used in the restriction digestion.
|
StrColumn |
PdbxEntitySrcGenCharacter.getResult() |
The result from this method of protein characterisation.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getReversePrimerId() |
This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.
|
StrColumn |
PdbxAuditRevisionHistory.getRevisionDate() |
The release date of the revision
|
StrColumn |
PdbxVersion.getRevisionDate() |
A date for the current version or revision.
|
StrColumn |
PdbxDatabaseStatus.getRevisionDescription() |
A description of the revision to this entry.
|
StrColumn |
Audit.getRevisionId() |
The value of _audit.revision_id must uniquely identify a record
in the AUDIT list.
|
StrColumn |
PdbxDatabaseStatus.getRevisionId() |
The NDB ID for entry that replaces this entry.
|
StrColumn |
PdbxVersion.getRevisionType() |
The content type that associated with the revision.
|
StrColumn |
Reflns.getRFreeDetails() |
A description of the method by which a subset of reflections was
selected for exclusion from refinement so as to be used in the
calculation of a 'free' R factor.
|
StrColumn |
PdbxConstruct.getRobotId() |
In cases where the sequence has been determined by a robot this
data item provides a pointer to pdbx_robot_system.id in the
PDBX_ROBOT_SYSTEM category for the robot responsible
|
StrColumn |
PdbxEntitySrcGenCharacter.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenChrom.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenClone.getRobotId() |
This data item is a pointer to pdbx_robot_system.id in the
PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenExpress.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenFract.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenLysis.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenProdOther.getRobotId() |
This data item is a pointer to pdbx_robot_system.id in the
PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getRobotId() |
This data item is a pointer to pdbx_robot_system.id in the
PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenProteolysis.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxEntitySrcGenRefold.getRobotId() |
This data item is a pointer to pdbx_robot_system.id
in the PDBX_ROBOT_SYSTEM category.
|
StrColumn |
PdbxContactAuthor.getRole() |
The role of this author in the project depositing this data.
|
StrColumn |
StructMonDetails.getRSCC() |
This data item describes the specifics of the calculations that
generated the values given in _struct_mon_prot.RSCC_all,
_struct_mon_prot.RSCC_main and _struct_mon_prot.RSCC_side.
|
StrColumn |
StructMonDetails.getRSR() |
This data item describes the specifics of the calculations that
generated the values given in _struct_mon_prot.RSR_all,
_struct_mon_prot.RSR_main and _struct_mon_prot.RSR_side.
|
StrColumn |
EmDepui.getSameAuthorsAsPdb() |
Indicates whether the authors for the EMDB entry are the same as for the PDB entry
in a joint map + model deposition
|
StrColumn |
EmDepui.getSameTitleAsPdb() |
Indicates whether the title for the EMDB entry is the same as for the PDB entry
in a joint map + model deposition
|
StrColumn |
PdbxEntitySrcGenChrom.getSampleConcMethod() |
The method used to determine the concentration of the protein solution put
onto the column.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getSampleDehydrationPrevention() |
Method to prevent dehydration of sample
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getSampleHolding() |
For a fixed target sample, mechanism to hold sample in the beam
|
StrColumn |
EmVitrification.getSamplePreparationId() |
This data item is a pointer to _em_sample_preparation.id in the
EM_SAMPLE_PREPARATION category.
|
StrColumn |
PdbxEntitySrcGenChrom.getSamplePrepDetails() |
Details of the sample preparation prior to running the column.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getSampleSolvent() |
The sample solution content and concentration
|
StrColumn |
PdbxNmrChemShiftExperiment.getSampleState() |
Physical state of the sample either anisotropic or isotropic.
|
StrColumn |
PdbxNmrExptl.getSampleState() |
Physical state of the sample either anisotropic or isotropic.
|
StrColumn |
EmGridPretreatment.getSampleSupportId() |
Pointer to EM SAMPLE SUPPORT
|
StrColumn |
EmImaging.getSampleSupportId() |
This data item is a pointer to _em_sample_support.id in
the EM_SAMPLE_SUPPORT category.
|
StrColumn |
EmSupportFilm.getSampleSupportId() |
Pointer to EM SAMPLE SUPPORT
|
StrColumn |
PdbxDepuiEntityStatusFlags.getSampleXyzSequenceAlignmentsValid() |
A flag to indicate that sample and coordinate sequence alignments is valid for this entity
|
StrColumn |
PdbxDepuiStatusFlags.getSampleXyzSequenceAlignmentsValid() |
A flag to indicate that all sample coordinate sequence alignments are valid.
|
StrColumn |
DiffrnRefln.getScaleGroupCode() |
The code identifying the scale applying to this reflection.
|
StrColumn |
Refln.getScaleGroupCode() |
This data item is a pointer to _reflns_scale.group_code in the
REFLNS_SCALE category.
|
StrColumn |
DiffrnRefln.getScanMode() |
The code identifying the mode of scanning for measurements
using a diffractometer.
|
StrColumn |
DiffrnRefln.getScanModeBackgd() |
The code identifying the mode of scanning a reflection to
measure the background intensity.
|
StrColumn |
EmImageScans.getScannerModel() |
The scanner model.
|
StrColumn |
EmImaging.getScansId() |
The value of _em_imaging.scans_id must uniquely identify
the image_scans used in the experiment.
|
StrColumn |
AtomType.getScatDispersionSource() |
Reference to the source of the real and imaginary dispersion
corrections for scattering factors used for this atom type.
|
StrColumn |
AtomType.getScatLengthNeutron() |
The bound coherent scattering length in femtometres for the
atom type at the isotopic composition used for the diffraction
experiment.
|
StrColumn |
AtomType.getScatSource() |
Reference to the source of the scattering factors or scattering
lengths used for this atom type.
|
StrColumn |
PdbxSolnScatterModel.getScatterId() |
This data item is a pointer to _pdbx_soln_scatter.id in the PDBX_SOLN_SCATTER category.
|
StrColumn |
AtomType.getScatVersusStolList() |
A table of scattering factors as a function of sin theta over
lambda.
|
StrColumn |
PdbxPointSymmetry.getSchoenfliesSymbol() |
The Schoenflies point symmetry symbol.
|
StrColumn |
PdbxPointSymmetryDepositorInfo.getSchoenfliesSymbol() |
The Schoenflies point symmetry symbol.
|
StrColumn |
IhmGeometricObjectHalfTorus.getSection() |
The section of the torus representing the half-torus.
|
StrColumn |
Publ.getSectionAbstract() |
The abstract section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionAcknowledgements() |
The acknowledgements section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionComment() |
The comment section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionDiscussion() |
The discussion section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionExperimental() |
The experimental section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionExptlPrep() |
The experimental preparation section of a manuscript if the
manuscript is submitted in parts.
|
StrColumn |
Publ.getSectionExptlRefinement() |
The experimental refinement section of a manuscript if the
manuscript is submitted in parts.
|
StrColumn |
Publ.getSectionExptlSolution() |
The experimental solution section of a manuscript if the
manuscript is submitted in parts.
|
StrColumn |
Publ.getSectionFigureCaptions() |
The figure captions section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
EmTomographySpecimen.getSectioning() |
The type of sectioning performed during specimen preparation.
|
StrColumn |
Publ.getSectionIntroduction() |
The introduction section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionReferences() |
The references section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionSynopsis() |
The synopsis section of a manuscript if the manuscript is
submitted in parts.
|
StrColumn |
Publ.getSectionTableLegends() |
The table legends section of a manuscript if the manuscript
is submitted in parts.
|
StrColumn |
Publ.getSectionTitle() |
The title of a manuscript if the manuscript is submitted in
parts.
|
StrColumn |
Publ.getSectionTitleFootnote() |
The footnote to the title of a manuscript if the manuscript
is submitted in parts.
|
StrColumn |
ExptlCrystalGrow.getSeeding() |
A description of the protocol used for seeding the crystal
growth.
|
StrColumn |
ExptlCrystalGrow.getSeedingRef() |
A literature reference that describes the protocol used to seed
the crystal.
|
StrColumn |
PdbxRefineTlsGroup.getSelection() |
A qualification of the subset of atoms in the specified
range included in the TLS fragment.
|
StrColumn |
PdbxStructGroupList.getSelection() |
A qualification of the subset of atoms in the group.
|
StrColumn |
IhmModelRepresentative.getSelectionCriteria() |
The selection criteria based on which the representative is chosen.
|
StrColumn |
PdbxNmrRepresentative.getSelectionCriteria() |
By highlighting the appropriate choice(s), describe the criteria used to
select this structure as a representative structure, or if an average
structure has been calculated describe how this was done.
|
StrColumn |
PdbxRefineTlsGroup.getSelectionDetails() |
A text description of subset of atoms included
included in the TLS fragment.
|
StrColumn |
PdbxStructGroupList.getSelectionDetails() |
A text description of subset of the atom selection in the group.
|
StrColumn |
StructNcsDomLim.getSelectionDetails() |
A text description of the selection of residues that
correspond to this domain.
|
StrColumn |
PdbxDatabaseMessage.getSender() |
The name of the sender.
|
StrColumn |
PdbxDepositionMessageInfo.getSender() |
A the message creator.
|
StrColumn |
PdbxDatabaseMessage.getSenderAddressEmail() |
The email address of the sender.
|
StrColumn |
PdbxDatabaseMessage.getSenderAddressFax() |
The FAX phone number of the sender.
|
StrColumn |
PdbxDatabaseMessage.getSenderAddressMail() |
The postal address of the sender.
|
StrColumn |
PdbxDatabaseMessage.getSenderAddressPhone() |
The phone number of the sender.
|
StrColumn |
PdbxDepositionMessageInfo.getSendStatus() |
The message status.
|
StrColumn |
StructSheetOrder.getSense() |
A flag to indicate whether the two designated residue ranges are
parallel or antiparallel to one another.
|
StrColumn |
StructSheetTopology.getSense() |
A flag to indicate whether the two designated residue ranges are
parallel or antiparallel to one another.
|
StrColumn |
PdbxConstruct.getSeq() |
sequence expressed as string of one-letter base codes or one
letter amino acid codes.
|
StrColumn |
PdbxReferenceEntitySubcomponents.getSeq() |
The subcomponent sequence for the entity.
|
StrColumn |
StructRef.getSeqAlign() |
A flag to indicate the scope of the alignment between the
sequence of the entity or biological unit described in the data
block and that in the referenced database entry.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getSeqAlignBegin() |
Beginning index in the author provided chemical sequence.
|
StrColumn |
PdbxStructRefSeqDepositorInfo.getSeqAlignEnd() |
Ending index in the author provided chemical sequence.
|
StrColumn |
PdbxPostProcessDetails.getSeqDetails() |
Details concerning the standardization of the chemical
sequence data in this entry.
|
StrColumn |
StructRef.getSeqDif() |
A flag to indicate the presence ('yes') or absence ('no') of
point differences between the sequence of the entity or
biological unit described in the data block and that in
the referenced database entry.
|
StrColumn |
PdbxPrereleaseSeq.getSeqOneLetterCode() |
Chemical sequence expressed as string of one-letter
amino acid codes.
|
StrColumn |
PdbxFeatureSequenceRange.getSeqRangeId() |
The value of _pdbx_feature_sequence_range.seq_range_id
references a sequence_range definition in category
PDBX_SEQUENCE_RANGE.
|
StrColumn |
PdbxSequenceRange.getSeqRangeId() |
This data item is an identifier for a sequence range.
|
StrColumn |
PdbxEntitySrcGenDepositorInfo.getSeqType() |
This data item povides additional information about the sequence type.
|
StrColumn |
PdbxDepuiUpload.getSequenceAlign() |
Some text data item related sequene alignment.
|
StrColumn |
PdbxEntryDetails.getSequenceDetails() |
Additional details about the sequence or sequence database correspondences
for this entry.
|
StrColumn |
PdbxSequencePattern.getSequencePattern() |
Sequence singlet or doublet.
|
StrColumn |
PdbxRefineAuxFile.getSerialNo() |
Serial number.
|
StrColumn |
PdbxXplorFile.getSerialNo() |
Serial number.
|
StrColumn |
PdbxPhasingMADSetSite.getSetId() |
record the phasing set.
|
StrColumn |
PhasingMADSet.getSetId() |
This data item is a pointer to _phasing_set.id in the
PHASING_SET category.
|
StrColumn |
PhasingMIRDerRefln.getSetId() |
This data item is a pointer to _phasing_set.id in the
PHASING_SET category.
|
StrColumn |
PhasingSetRefln.getSetId() |
This data item is a pointer to _phasing_set.id in the
PHASING_SET category.
|
StrColumn |
PdbxDatabaseStatus.getSGEntry() |
This code indicates whether the entry belongs to
Structural Genomics Project.
|
StrColumn |
SpaceGroupSymop.getSgId() |
This must match a particular value of _space_group.id, allowing
the symmetry operation to be identified with a particular space
group.
|
StrColumn |
EmSpecimen.getShadowingApplied() |
'YES' indicates that the specimen has been shadowed.
|
StrColumn |
PdbxStructSheetHbond.getSheetId() |
This data item is a pointer to _struct_sheet.id in the
STRUCT_SHEET category.
|
StrColumn |
StructSheetHbond.getSheetId() |
This data item is a pointer to _struct_sheet.id in the
STRUCT_SHEET category.
|
StrColumn |
StructSheetOrder.getSheetId() |
This data item is a pointer to _struct_sheet.id in the
STRUCT_SHEET category.
|
StrColumn |
StructSheetRange.getSheetId() |
This data item is a pointer to _struct_sheet.id in the
STRUCT_SHEET category.
|
StrColumn |
StructSheetTopology.getSheetId() |
This data item is a pointer to _struct_sheet.id in the
STRUCT_SHEET category.
|
StrColumn |
StructSiteGen.getSiteId() |
This data item is a pointer to _struct_site.id in the STRUCT_SITE
category.
|
StrColumn |
StructSiteKeywords.getSiteId() |
This data item is a pointer to _struct_site.id in the STRUCT_SITE
category.
|
StrColumn |
StructSiteView.getSiteId() |
This data item is a pointer to _struct_site.id in the STRUCT_SITE
category.
|
StrColumn |
GeomAngle.getSiteSymmetry1() |
The symmetry code of the first of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getSiteSymmetry1() |
The symmetry code of the first of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getSiteSymmetry1() |
The symmetry code of the first of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getSiteSymmetry1() |
The symmetry code of the first of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxValidateSymmContact.getSiteSymmetry1() |
The symmetry of the first of the two atoms define the close contact.
|
StrColumn |
PdbxValSymContact.getSiteSymmetry1() |
The symmetry operation applied to the first of the two atoms
defining the close contact.
|
StrColumn |
PdbxVirtualAngle.getSiteSymmetry1() |
The symmetry code of the first of the three atom sites that
define the angle specified by _pdbx_virtual_angle.
|
StrColumn |
PdbxVirtualBond.getSiteSymmetry1() |
The symmetry code of the first of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getSiteSymmetry1() |
The symmetry code of the first of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getSiteSymmetry2() |
The symmetry code of the second of the three atom sites that
define the angle.
|
StrColumn |
GeomBond.getSiteSymmetry2() |
The symmetry code of the second of the two atom sites that
define the bond.
|
StrColumn |
GeomContact.getSiteSymmetry2() |
The symmetry code of the second of the two atom sites that
define the contact.
|
StrColumn |
GeomTorsion.getSiteSymmetry2() |
The symmetry code of the second of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxValidateSymmContact.getSiteSymmetry2() |
The symmetry of the second of the two atoms define the close contact.
|
StrColumn |
PdbxValSymContact.getSiteSymmetry2() |
The symmetry operation applied to the second of the two atoms
defining the close contact.
|
StrColumn |
PdbxVirtualAngle.getSiteSymmetry2() |
The symmetry code of the second of the three atom sites that
define the angle specified by _pdbx_virtual_angle.
|
StrColumn |
PdbxVirtualBond.getSiteSymmetry2() |
The symmetry code of the second of the two atom sites that
define the bond specified by _pdbx_virtual_bond.dist.
|
StrColumn |
PdbxVirtualTorsion.getSiteSymmetry2() |
The symmetry code of the second of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomAngle.getSiteSymmetry3() |
The symmetry code of the third of the three atom sites that
define the angle.
|
StrColumn |
GeomTorsion.getSiteSymmetry3() |
The symmetry code of the third of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualAngle.getSiteSymmetry3() |
The symmetry code of the third of the three atom sites that
define the angle specified by _pdbx_virtual_angle.
|
StrColumn |
PdbxVirtualTorsion.getSiteSymmetry3() |
The symmetry code of the third of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomTorsion.getSiteSymmetry4() |
The symmetry code of the fourth of the four atom sites that
define the torsion angle.
|
StrColumn |
PdbxVirtualTorsion.getSiteSymmetry4() |
The symmetry code of the fourth of the four atom sites that
define the torsion angle specified by _pdbx_virtual_torsion.value.
|
StrColumn |
GeomHbond.getSiteSymmetryA() |
The symmetry code of the acceptor-atom site that defines the
hydrogen bond.
|
StrColumn |
GeomHbond.getSiteSymmetryD() |
The symmetry code of the donor-atom site that defines the
hydrogen bond.
|
StrColumn |
GeomHbond.getSiteSymmetryH() |
The symmetry code of the hydrogen-atom site that defines the
hydrogen bond.
|
StrColumn |
DiffrnSource.getSize() |
The dimensions of the source as viewed from the sample.
|
StrColumn |
PdbxDrugInfo.getSizeOfMoleculePerAsymUnit() |
Size of drug molecules per asymmetric unit.
|
StrColumn |
PdbxDatabaseStatus.getSkipPDBREMARK() |
This code indicates whether to skip production of
a PDB REMARK for this file.
|
StrColumn |
PdbxDatabaseStatus.getSkipPDBREMARK500() |
This code indicates whether to skip production of
PDB REMARK 500 for this file.
|
StrColumn |
IhmChemicalComponentDescriptor.getSmiles() |
The smile string of the component.
|
StrColumn |
IhmChemicalComponentDescriptor.getSmilesCanonical() |
The canonical smile string of the component.
|
StrColumn |
PdbxExptlCrystalCryoTreatment.getSoakingDetails() |
Details of the soaking treatment applied to this crystal.
|
StrColumn |
Em3dReconstruction.getSoftware() |
software name
|
StrColumn |
PdbxSolnScatterModel.getSoftwareAuthorList() |
A list of the software authors
|
StrColumn |
PdbxNmrChemShiftSoftware.getSoftwareLabel() |
Name given to the software.
|
StrColumn |
PdbxSolnScatterModel.getSoftwareList() |
A list of the software used in the modeeling
|
StrColumn |
Em2dProjectionSelection.getSoftwareName() |
The software used to select 2d projections.
|
StrColumn |
Em3dFitting.getSoftwareName() |
The software used for fitting atomic coordinates to the map.
|
StrColumn |
PdbxNmrConstraintFile.getSoftwareName() |
Name of the software application that the listed constraint file is used
as input.
|
StrColumn |
ExptlCrystalGrowComp.getSolId() |
An identifier for the solution to which the given solution
component belongs.
|
StrColumn |
PdbxExptlCrystalGrowComp.getSolId() |
An identifier for the solution to which the given solution
component belongs.
|
StrColumn |
PdbxExptlCrystalGrowSol.getSolId() |
An identifier for this solution (e.g.
|
StrColumn |
AtomSites.getSolutionHydrogens() |
This code identifies the method used to locate the
hydrogen atoms.
|
StrColumn |
PdbxNmrExptl.getSolutionId() |
The solution_id from the Experimental Sample to identify the sample
that these conditions refer to.
|
StrColumn |
PdbxNmrExptlSample.getSolutionId() |
The name (number) of the sample.
|
StrColumn |
PdbxNmrSampleDetails.getSolutionId() |
The name (number) of the sample.
|
StrColumn |
AtomSites.getSolutionPrimary() |
This code identifies the method used to locate the initial
atom sites.
|
StrColumn |
AtomSites.getSolutionSecondary() |
This code identifies the method used to locate the
non-hydrogen-atom sites not found by
_atom_sites.solution_primary.
|
StrColumn |
PdbxNmrChemShiftRef.getSolvent() |
Solvent used for the external reference sample.
|
StrColumn |
PdbxCoord.getSolventAtomsYN() |
Gives information if the coordinates for solvent atoms
are available.
|
StrColumn |
Refine.getSolventModelDetails() |
Special aspects of the solvent model used during refinement.
|
StrColumn |
PdbxNmrSampleDetails.getSolventSystem() |
The solvent system used for this sample.
|
StrColumn |
DiffrnSource.getSource() |
The general class of the radiation source.
|
StrColumn |
EmEntityAssembly.getSource() |
The assembly type.
|
StrColumn |
PdbxChemCompFeature.getSource() |
The information source for the component feature.
|
StrColumn |
PdbxReferenceEntitySrcNat.getSource() |
The data source for this information.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getSource() |
The source of the annoation for this entity.
|
StrColumn |
PdbxReferenceMoleculeDetails.getSource() |
A data source of this information (e.g.
|
StrColumn |
PdbxReferenceMoleculeFeatures.getSource() |
The information source for the component feature.
|
StrColumn |
PdbxReferenceMoleculeSynonyms.getSource() |
The source of this synonym name for the entity.
|
StrColumn |
PdbxSolnScatter.getSourceBeamline() |
The beamline name used for the experiment
|
StrColumn |
PdbxSolnScatter.getSourceBeamlineInstrument() |
The instrumentation used on the beamline
|
StrColumn |
PdbxSolnScatter.getSourceClass() |
The general class of the radiation source.
|
StrColumn |
PdbxEntryDetails.getSourceDetails() |
Additional details about the source and taxonomy of the macromolecular
components in this entry.
|
StrColumn |
PdbxReferenceEntitySrcNat.getSourceId() |
A identifier within the data source for this information.
|
StrColumn |
PdbxReferenceMoleculeDetails.getSourceId() |
A identifier within the data source for this information.
|
StrColumn |
PdbxSolnScatter.getSourceType() |
The make, model, name or beamline of the source of radiation.
|
StrColumn |
PdbxDataProcessingCell.getSpaceGroup() |
Space group name.
|
StrColumn |
Em3dCrystalEntity.getSpaceGroupName() |
Space group name.
|
StrColumn |
Em2dCrystalEntity.getSpaceGroupNameH_M() |
There are 17 plane groups classified as oblique, rectangular, square, and hexagonal.
|
StrColumn |
PdbxDccDensity.getSpaceGroupNameH_M() |
Hermann-Mauguin space-group symbol reported in the model file.
|
StrColumn |
Symmetry.getSpaceGroupNameH_M() |
Hermann-Mauguin space-group symbol.
|
StrColumn |
Symmetry.getSpaceGroupNameHall() |
Space-group symbol as described by Hall (1981).
|
StrColumn |
PdbxDccDensity.getSpaceGroupPointless() |
Hermann-Mauguin space-group symbol calculated by the POINTLESS
program using the structure factor file.
|
StrColumn |
AtomSites.getSpecialDetails() |
Additional information about the atomic coordinates not coded
elsewhere in the CIF.
|
StrColumn |
PdbxNaStructKeywds.getSpecialFeature() |
Describes special features of NA.
|
StrColumn |
EntitySrcNat.getSpecies() |
The species of the organism from which the entity was isolated.
|
StrColumn |
EmImaging.getSpecimenHolderModel() |
The name of the model of specimen holder used during imaging.
|
StrColumn |
EmImaging.getSpecimenHolderType() |
The type of specimen holder used during imaging.
|
StrColumn |
EmBuffer.getSpecimenId() |
pointer to _em_specimen.id
|
StrColumn |
EmCrystalFormation.getSpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmEmbedding.getSpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmImaging.getSpecimenId() |
Foreign key to the EM_SPECIMEN category
|
StrColumn |
EmSampleSupport.getSpecimenId() |
This data item is a pointer to _em_sample_preparation.id in the EM_SPECIMEN category.
|
StrColumn |
EmShadowing.getSpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmStaining.getSpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmTomographySpecimen.getSpecimenId() |
Foreign key relationship to the EMD SPECIMEN category
|
StrColumn |
EmVitrification.getSpecimenId() |
This data item is a pointer to _em_specimen.id
|
StrColumn |
DiffrnMeasurement.getSpecimenSupport() |
The physical device used to support the crystal during data
collection.
|
StrColumn |
EmExperiment.getSpecimenType() |
The specimen type used in the EM experiment.
|
StrColumn |
PdbxExptlPd.getSpecPreparation() |
A description of preparation steps for producing the
diffraction specimen from the sample.
|
StrColumn |
PdbxExptlPd.getSpecPreparationPHRange() |
The range of pH values at which the sample was prepared.
|
StrColumn |
PdbxNmrSpectralDim.getSpectralRegion() |
A code defining the type of nuclei that would be expected to be observed
in the spectral region observed in the dimension of the spectrum.
|
StrColumn |
PdbxNmrSpectrometer.getSpectrometerId() |
Assign a numerical ID to each instrument.
|
StrColumn |
EmImagingOptics.getSphAberrationCorrector() |
Spherical aberration corrector information
|
StrColumn |
Entity.getSrcMethod() |
The method by which the sample for the entity was produced.
|
StrColumn |
PdbxSource.getSrcMethod() |
Source of biological unit.
|
StrColumn |
EmSpecimen.getStainingApplied() |
'YES' indicates that the specimen has been stained.
|
StrColumn |
DiffrnRefln.getStandardCode() |
The code identifying that this reflection was measured as a
standard intensity.
|
StrColumn |
EntitySrcGen.getStartConstructId() |
A pointer to _pdbx_construct.id in the PDBX_CONSTRUCT category.
|
StrColumn |
IhmStartingComparativeModels.getStartingModelAuthAsymId() |
The chainId/auth_asym_id corresponding to the starting model.
|
StrColumn |
IhmStartingModelDetails.getStartingModelAuthAsymId() |
The author assigned chainId/auth_asym_id corresponding to this starting model.
|
StrColumn |
IhmModelRepresentationDetails.getStartingModelId() |
The identifier for the starting structural model.
|
StrColumn |
IhmStartingComparativeModels.getStartingModelId() |
The identifier for the starting structural model.
|
StrColumn |
IhmStartingComputationalModels.getStartingModelId() |
The identifier for the starting structural model.
|
StrColumn |
IhmStartingModelCoord.getStartingModelId() |
The identifier for the starting structural model.
|
StrColumn |
IhmStartingModelDetails.getStartingModelId() |
A unique identifier for the starting structural model.
|
StrColumn |
IhmStartingModelSeqDif.getStartingModelId() |
Unique identifier for the starting model record.
|
StrColumn |
IhmStartingModelDetails.getStartingModelSource() |
The source of the starting model.
|
StrColumn |
PdbxReferencePublicationList.getStartYear() |
Year in which publications began operation..
|
StrColumn |
IhmMultiStateModeling.getStateName() |
A descriptive name for the state.
|
StrColumn |
PdbxContactAuthor.getStateProvince() |
The mailing address of the author of the data block to whom
correspondence should be addressed, state or province.
|
StrColumn |
IhmMultiStateModeling.getStateType() |
The type that the multiple states being modeled belong to.
|
StrColumn |
DatabasePDBRev.getStatus() |
The status of this revision.
|
StrColumn |
PdbxConnect.getStatus() |
Release status associated with this component.
|
StrColumn |
PdbxDataProcessingStatus.getStatus() |
A data processing workflow task status code.
|
StrColumn |
Refln.getStatus() |
Classification of a reflection so as to indicate its status with
respect to inclusion in the refinement and the calculation of
R factors.
|
StrColumn |
PdbxDatabaseStatus.getStatusCode() |
Code for status of file.
|
StrColumn |
PdbxDatabaseStatusHistory.getStatusCode() |
Current entry processing status.
|
StrColumn |
PdbxDatabaseStatus.getStatusCodeCs() |
Code for status of chemical shift data file.
|
StrColumn |
PdbxDatabaseStatus.getStatusCodeMr() |
Code for status of NMR constraints file.
|
StrColumn |
PdbxDatabaseStatus.getStatusCodeNmrData() |
Code for status of unified NMR data file.
|
StrColumn |
PdbxDatabaseStatus.getStatusCodeSf() |
Code for status of structure factor file.
|
StrColumn |
PdbxDatabaseStatus.getStatusCoordinatesInNDB() |
Give information about status of coordinates of an entry in NDB.
|
StrColumn |
PdbxHelicalSymmetryDepositorInfo.getStatusFlag() |
A flag to indicate that this data is relevant to the current entry
|
StrColumn |
PdbxPointSymmetryDepositorInfo.getStatusFlag() |
A flag to indicate that this data is relevant to the current entry
|
StrColumn |
IhmOrderedEnsemble.getStepDescription() |
Description of the step.
|
StrColumn |
IhmModelingProtocolDetails.getStepMethod() |
Description of the method involved in the modeling step.
|
StrColumn |
IhmModelingProtocolDetails.getStepName() |
The name or type of the modeling step.
|
StrColumn |
NdbStructNaBasePairStep.getStepName() |
The text name of this step.
|
StrColumn |
PdbxEntitySrcGenPure.getStorageBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxEntitySrcGenRefold.getStorageBufferId() |
This item is a pointer to pdbx_buffer.id in the PDBX_BUFFER category.
|
StrColumn |
PdbxEntitySrcGenExpress.getStorageDetails() |
Details of how the harvested culture was stored.
|
StrColumn |
PdbxDepositionMessageFileReference.getStorageType() |
The storate type of the referenced data file.
|
StrColumn |
EmEntityAssemblyNaturalsource.getStrain() |
The strain of the natural organism from which the component was
obtained, if relevant.
|
StrColumn |
EmEntityAssemblyRecombinant.getStrain() |
The strain of the host organism from which the expresed component was
obtained, if relevant.
|
StrColumn |
EmVirusNaturalHost.getStrain() |
The strain of the host organism from which the virus was
obtained, if relevant.
|
StrColumn |
EntitySrcNat.getStrain() |
The strain of the organism from which the entity was isolated.
|
StrColumn |
PdbxEntitySrcSyn.getStrain() |
The strain of the organism from which the sequence of
the synthetic entity was derived.
|
StrColumn |
PdbxReferenceEntitySrcNat.getStrain() |
The strain of the organism from which the entity was isolated.
|
StrColumn |
PdbxNaStructKeywds.getStrandDescription() |
Gives general structural description of NA.
|
StrColumn |
PdbxHybrid.getStrandId() |
Strand id.
|
StrColumn |
IhmModelingProtocolDetails.getStructAssemblyDescription() |
A textual description of the structural assembly being modeled.
|
StrColumn |
PdbxStructGroupComponentRange.getStructGroupId() |
This data item is a pointer to _pdbx_struct_group_list.struct_group_id in the
PDBX_STRUCT_GROUP_LIST category.
|
StrColumn |
PdbxStructGroupComponents.getStructGroupId() |
The value of _pdbx_struct_group_components.group_id identifies the group
assignment for the component.
|
StrColumn |
PdbxStructGroupList.getStructGroupId() |
The unique identifier for the group.
|
StrColumn |
ChemicalFormula.getStructural() |
See the CHEMICAL_FORMULA category description for the rules for
writing chemical formulae for inorganics, organometallics, metal
complexes etc., in which bonded groups are preserved as
discrete entities within parentheses, with post-multipliers as
required.
|
StrColumn |
PdbxDepuiEntryDetails.getStructuralGenomicsFlag() |
A flag to indicate the that the deposition is a contribution from a structural genomics project.
|
StrColumn |
PdbxCoord.getStructureFactorsYN() |
Gives information if the structure factors for this entry
are available.
|
StrColumn |
Computing.getStructureRefinement() |
Software used for refinement of the structure.
|
StrColumn |
Computing.getStructureSolution() |
Software used for solution of the structure.
|
StrColumn |
PdbxNmrComputing.getStructureSolution() |
Enter the name of the software used to calculate the structure.
|
StrColumn |
PdbxNmrComputing.getStructureSolutionVersion() |
Enter the version of the software used to calculate the structure.
|
StrColumn |
IhmEnsembleInfo.getSubSampleFlag() |
Indicate if the ensemble consists of sub samples.
|
StrColumn |
IhmEnsembleInfo.getSubSamplingType() |
Indicate the sub sampling type, if applicable.
|
StrColumn |
ChemCompAtom.getSubstructCode() |
This data item assigns the atom to a substructure of the
component, if appropriate.
|
StrColumn |
JournalIndex.getSubterm() |
Journal index data items are defined by the journal staff.
|
StrColumn |
PdbxHybrid.getSugarName() |
Name of sugar group of residue.
|
StrColumn |
ChemicalFormula.getSum() |
See the CHEMICAL_FORMULA category description for the rules
for writing chemical formulae in which all discrete bonded
residues and ions are summed over the constituent elements,
following the ordering given in general rule (5) in the
CHEMICAL_FORMULA category description.
|
StrColumn |
PdbxEntitySrcGenClone.getSummary() |
Summary of ligation or recombionation cloning used, the associated
verification method and any purification of the product.
|
StrColumn |
PdbxEntitySrcGenExpress.getSummary() |
Summary of the details of the expression steps used in protein production.
|
StrColumn |
PdbxEntitySrcGenProdDigest.getSummary() |
Summary of the details of restriction digestion any purification of the
product of the digestion.
|
StrColumn |
PdbxEntitySrcGenProdPcr.getSummary() |
Summary of the details of the PCR reaction any purification of the
product of the PCR reaction.
|
StrColumn |
PdbxEntitySrcGenPure.getSummary() |
Summary of the details of protein purification method used to obtain the final
protein product.
|
StrColumn |
Journal.getSupplPublNumber() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getSupplPublPages() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxChemCompFeature.getSupport() |
The supporting evidence for this feature.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getSupport() |
Text describing the experimentation or computational evidence for
the annotation.
|
StrColumn |
PdbxSerialCrystallographySampleDeliveryFixedTarget.getSupportBase() |
Type of base holding the support
|
StrColumn |
EmSamplePreparation.getSupportId() |
This data item is a pointer to _em_sample_support.id in the EM_SAMPLE_SUPPORT category.
|
StrColumn |
PdbxNmrSpectralDim.getSweepWidthUnits() |
The units for the sweep width value (Hz or ppm)
|
StrColumn |
AtomType.getSymbol() |
The code used to identify the atom species (singular or plural)
representing this atom type.
|
StrColumn |
PdbxValidateCloseContact.getSymmAsXyz1() |
The symmetry of the first of the two atoms define the close contact.
|
StrColumn |
PdbxValidateCloseContact.getSymmAsXyz2() |
The symmetry of the second of the two atoms define the close contact.
|
StrColumn |
PdbxSolventAtomSiteMapping.getSymmetry() |
Describes the symmetry operation that should be applied to the
target solvent atom
|
StrColumn |
PdbxStructPackGen.getSymmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _pdbx_struct_pack_gen.asym_id to generate a
packing picture.
|
StrColumn |
StructBiolGen.getSymmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _struct_biol_gen.asym_id to generate a
portion of the biological structure.
|
StrColumn |
StructSheetRange.getSymmetry() |
Describes the symmetry operation that should be applied to the
residues delimited by the start and end designators in
order to generate the appropriate strand in this sheet.
|
StrColumn |
StructSiteGen.getSymmetry() |
Describes the symmetry operation that should be applied to the
atom set specified by _struct_site_gen.label* to generate a
portion of the site.
|
StrColumn |
PdbxSolventAtomSiteMapping.getSymmetryAsXyz() |
The symmetry applied to the target solvent atom.
|
StrColumn |
PdbxStructAssemblyGenDepositorInfo.getSymmetryOperation() |
This item expresses the transformation
on an X, Y and Z basis.
|
StrColumn |
PdbxStructOperList.getSymmetryOperation() |
The symmetry operation corresponding to the transformation operation.
|
StrColumn |
PdbxStructOperListDepositorInfo.getSymmetryOperation() |
The symmetry operation corresponding to the transformation operation.
|
StrColumn |
EmMap.getSymmetrySpaceGroup() |
The space group number for the map.
|
StrColumn |
Em3dReconstruction.getSymmetryType() |
The type of symmetry applied to the reconstruction
|
StrColumn |
EmSingleParticleEntity.getSymmetryType() |
The single particle symmetry type.
|
StrColumn |
EmEntityAssembly.getSynonym() |
Alternative name of the component.
|
StrColumn |
EntityNameSys.getSystem() |
The system used to generate the systematic name of the entity.
|
StrColumn |
PdbxEntitySrcGenCloneRecombination.getSystem() |
The name of the recombination system.
|
StrColumn |
PdbxColumninfo.getTablename() |
SQL table name.
|
StrColumn |
PdbxTableinfo.getTablename() |
SQL table name.
|
StrColumn |
DiffrnSource.getTarget() |
The chemical element symbol for the X-ray target
(usually the anode) used to generate X-rays.
|
StrColumn |
Em3dFitting.getTargetCriteria() |
The measure used to assess quality of fit of the atomic coordinates in the
3DEM map volume.
|
StrColumn |
PdbxNmrSoftwareTask.getTask() |
A word or brief phrase that describes the task that a software application
was used to carry out.
|
StrColumn |
PdbxDataProcessingStatus.getTaskName() |
A data processing workflow task name.
|
StrColumn |
PdbxReferenceEntitySrcNat.getTaxid() |
The NCBI TaxId of the organism from which the entity was isolated.
|
StrColumn |
PdbxReferenceLinkedEntity.getTaxonomyClass() |
The NCBI taxonomy classification of the organism for this linked entity example.
|
StrColumn |
PdbxReferenceLinkedEntity.getTaxonomyId() |
The NCBI taxonomy identifier of the organism for the linked entity example.
|
StrColumn |
Journal.getTecheditorAddress() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorCode() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorEmail() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorFax() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorName() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorNotes() |
Journal data items are defined by the journal staff.
|
StrColumn |
Journal.getTecheditorPhone() |
Journal data items are defined by the journal staff.
|
StrColumn |
ExptlCrystalGrow.getTempDetails() |
A description of special aspects of temperature control during
crystal growth.
|
StrColumn |
PdbxNmrExptlSampleConditions.getTemperature() |
The temperature (in Kelvin) at which NMR data were
collected.
|
StrColumn |
PdbxNmrExptlSampleConditions.getTemperatureUnits() |
Units for the value of the sample condition temperature.
|
StrColumn |
IhmStartingComparativeModels.getTemplateAuthAsymId() |
The chainId/auth_asym_id corresponding to the template.
|
StrColumn |
IhmStartingComparativeModels.getTemplateSequenceIdentityDenominator() |
The denominator used while calculating the sequence identity provided in
_ihm_starting_comparative_models.template_sequence_identity.
|
StrColumn |
JournalIndex.getTerm() |
Journal index data items are defined by the journal staff.
|
StrColumn |
AtomSitesFootnote.getText() |
The text of the footnote.
|
StrColumn |
DatabasePDBCaveat.getText() |
The full text of the PDB caveat record.
|
StrColumn |
DatabasePDBRemark.getText() |
The full text of the PDB remark record.
|
StrColumn |
EntityKeywords.getText() |
Keywords describing this entity.
|
StrColumn |
PdbxDatabaseRemark.getText() |
The full text of the PDB remark record.
|
StrColumn |
PdbxNmrDetails.getText() |
Additional details describing the NMR experiment.
|
StrColumn |
PdbxPdbCompnd.getText() |
PDB COMPND record.
|
StrColumn |
PdbxPdbSource.getText() |
PDB SOURCE record.
|
StrColumn |
PdbxPostProcessDetails.getText() |
The text description of changes required to standardize
this entry.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getText() |
Text describing the annotation for this entity.
|
StrColumn |
PdbxReferenceMoleculeDetails.getText() |
The text of the description of special aspects of the entity.
|
StrColumn |
StructBiolKeywords.getText() |
Keywords describing this biological entity.
|
StrColumn |
StructKeywords.getText() |
Keywords describing this structure.
|
StrColumn |
StructSiteKeywords.getText() |
Keywords describing this site.
|
StrColumn |
PdbxNmrSpectralPeakList.getTextDataFormat() |
The data format used to represent the spectral peak data as ASCII text
in the text block that is the value to the '_Spectral_peak_list.Text_data' tag.
|
StrColumn |
AtomSite.getThermalDisplaceType() |
A standard code used to describe the type of atomic displacement
parameters used for the site.
|
StrColumn |
ChemComp.getThreeLetterCode() |
For standard polymer components, the common three-letter code for
the component.
|
StrColumn |
Reflns.getThresholdExpression() |
The threshold, usually based on multiples of u(I), u(F^2^)
or u(F), that serves to identify significantly intense
reflections, the number of which is given by _reflns.number_gt.
|
StrColumn |
EmDiffraction.getTiltAngleList() |
Comma-separated list of tilt angles (in degrees) used in the electron diffraction experiment.
|
StrColumn |
ExptlCrystalGrow.getTime() |
The approximate time that the crystal took to grow to the size
used for data collection.
|
StrColumn |
EmVitrification.getTimeResolvedState() |
The length of time after an event effecting the sample that
vitrification was induced and a description of the event.
|
StrColumn |
PdbxDepositionMessageInfo.getTimestamp() |
A the date and time of message creation.
|
StrColumn |
EmCrystalFormation.getTimeUnit() |
Time unit for array crystallization
|
StrColumn |
EmEntityAssemblyNaturalsource.getTissue() |
The tissue of the natural organism from which the component was obtained.
|
StrColumn |
EntitySrcNat.getTissue() |
The tissue of the organism from which the entity was isolated.
|
StrColumn |
EntitySrcNat.getTissueFraction() |
The subcellular fraction of the tissue of the organism from
which the entity was isolated.
|
StrColumn |
Citation.getTitle() |
The title of the citation; relevant for journal articles, books
and book chapters.
|
StrColumn |
EmAdmin.getTitle() |
Title for the EMDB entry.
|
StrColumn |
PublBody.getTitle() |
Title of the associated section of text.
|
StrColumn |
Struct.getTitle() |
A title for the data block.
|
StrColumn |
PdbxDatabaseStatus.getTitleSuppression() |
This code indicates whether to suppress the entry title.
|
StrColumn |
PdbxAtomSiteAnisoTls.getTlsGroupId() |
This data item identifies the TLS group membership for
this atom.
|
StrColumn |
PdbxDepuiValidationStatusFlags.getTlsNoAniso() |
A flag to indicate if the uploaded model has TLS records
but no anisotropic ones.
|
StrColumn |
PdbxDccDensity.getTLSRefinementReported() |
Whether TLS was used in refinement.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getToAtomId() |
The atom identifier/name in the first of the two constituents containing the linkage.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getToCompId() |
The component identifier in the first of the two constituents containing the linkage.
|
StrColumn |
PdbxXplorFile.getTopolFile() |
Topology file name in X-PLOR/CNS refinement.
|
StrColumn |
EmSupportFilm.getTopology() |
The topology of the material from which the grid is made.
|
StrColumn |
ChemCompTorValue.getTorId() |
This data item is a pointer to _chem_comp_tor.id in the
CHEM_COMP_TOR category.
|
StrColumn |
ChemLinkTorValue.getTorId() |
This data item is a pointer to _chem_link_tor.id in the
CHEM_LINK_TOR category.
|
StrColumn |
PdbxNmrEnsemble.getTorsionAngleConstraintViolationMethod() |
This item describes the method used to calculate the torsion angle constraint violation statistics.
|
StrColumn |
PdbxEntitySrcGenClone.getTransformationMethod() |
The method used to transform the expression cell line with the vector
|
StrColumn |
PdbxDccDensity.getTranslationalPseudoSymmetry() |
Boolean whether translational pseudo symmetry exist (Y) or
not (N) as determined by Xtriage.
|
StrColumn |
RefineBIso.getTreatment() |
The treatment of isotropic B-factor (displacement-parameter)
refinement for a class of atoms defined in _refine_B_iso.class.
|
StrColumn |
RefineOccupancy.getTreatment() |
The treatment of occupancies for a class of atoms
described in _refine_occupancy.class.
|
StrColumn |
PdbxDccDensity.getTwinByXtriage() |
Boolean (Y/N) whether twin is detected by Xtriage.
|
StrColumn |
PdbxDccDensity.getTwinFraction() |
Twin fractions determined by REFMAC.
|
StrColumn |
PdbxDccDensity.getTwinOperator() |
Twin operators determined by REFMAC.
|
StrColumn |
PdbxDccDensity.getTwinOperatorXtriage() |
A list of the twin operators determined by Xtriage.
|
StrColumn |
PdbxDccDensity.getTwinType() |
Type of twin (merohedral,Pseudo-merohedral or non-merohedral)
determined by Xtriage.
|
StrColumn |
ChemComp.getType() |
For standard polymer components, the type of the monomer.
|
StrColumn |
ChemicalConnBond.getType() |
The chemical bond type associated with the connection between
the two sites _chemical_conn_bond.atom_1 and
_chemical_conn_bond.atom_2.
|
StrColumn |
DatabasePDBRevRecord.getType() |
The types of records that were changed in this revision to a
PDB entry.
|
StrColumn |
DiffrnDetector.getType() |
The make, model or name of the detector device used.
|
StrColumn |
DiffrnOrientMatrix.getType() |
A description of the orientation matrix type and how it should
be applied to define the orientation of the crystal precisely
with respect to the diffractometer axes.
|
StrColumn |
DiffrnRadiation.getType() |
The nature of the radiation.
|
StrColumn |
DiffrnSource.getType() |
The make, model or name of the source of radiation.
|
StrColumn |
EmCtfCorrection.getType() |
Type of CTF correction applied
|
StrColumn |
EmDetector.getType() |
The detector type used for recording images.
|
StrColumn |
EmEntityAssembly.getType() |
A description of types of components of the
assembly of the biological structure.
|
StrColumn |
EmEulerAngleAssignment.getType() |
The procedure used to assigned euler angles.
|
StrColumn |
EmFinalClassification.getType() |
Space (2D/3D) for the classification.
|
StrColumn |
EmGridPretreatment.getType() |
Type of grid pretreatment
|
StrColumn |
EmMap.getType() |
map format
|
StrColumn |
EmStaining.getType() |
type of staining
|
StrColumn |
EmStartModel.getType() |
Type of startup model (map density) used to initiate the reconstruction
|
StrColumn |
Entity.getType() |
Defines the type of the entity.
|
StrColumn |
EntityPoly.getType() |
The type of the polymer.
|
StrColumn |
IhmModelingPostProcess.getType() |
The type of post modeling analysis being carried out.
|
StrColumn |
IhmStructAssemblyClass.getType() |
The type of classifier.
|
StrColumn |
JournalIndex.getType() |
Journal index data items are defined by the journal staff.
|
StrColumn |
PdbxAuditRevisionDetails.getType() |
A type classification of the revision
|
StrColumn |
PdbxChemCompDepositorInfo.getType() |
This data item contains the chemical component type.
|
StrColumn |
PdbxChemCompDescriptor.getType() |
This data item contains the descriptor type.
|
StrColumn |
PdbxChemCompFeature.getType() |
The component feature type.
|
StrColumn |
PdbxChemCompIdentifier.getType() |
This data item contains the identifier type.
|
StrColumn |
PdbxChemCompModelDescriptor.getType() |
This data item contains the descriptor type.
|
StrColumn |
PdbxChemCompNonstandard.getType() |
This data item describes modification type.
|
StrColumn |
PdbxChemCompSubcomponentEntityList.getType() |
Defines the type of the entity.
|
StrColumn |
PdbxChemCompSubcomponentStructConn.getType() |
The chemical or structural type of the interaction.
|
StrColumn |
PdbxChemCompSynonyms.getType() |
The type of this synonym.
|
StrColumn |
PdbxConnect.getType() |
Approximately corresponds to _chem_comp.type
|
StrColumn |
PdbxConstruct.getType() |
The type of nucleic acid sequence in the construct.
|
StrColumn |
PdbxConstructFeature.getType() |
The type of the feature
|
StrColumn |
PdbxCoordinateModel.getType() |
A classification of the composition of the coordinate model.
|
StrColumn |
PdbxDepuiEntityFeatures.getType() |
A flag to indicate the molecule class for the entity.
|
StrColumn |
PdbxEntityBranch.getType() |
The type of this branched oligosaccharide.
|
StrColumn |
PdbxEntityBranchDescriptor.getType() |
This data item contains the descriptor type.
|
StrColumn |
PdbxEntityFuncBindMode.getType() |
This data item describes the functional type of the
protein oligonucleotide binding interaction.
|
StrColumn |
PdbxEntityFuncEnzyme.getType() |
This data item describes the type of enzyme function.
|
StrColumn |
PdbxEntityFuncOther.getType() |
This data item describes the type of structural function.
|
StrColumn |
PdbxEntityFuncRegulatory.getType() |
This data item describes the type of regulatory function.
|
StrColumn |
PdbxEntityFuncStructural.getType() |
This data item describes the type of structural function.
|
StrColumn |
PdbxEntityPolyNaType.getType() |
This data item describes the nucleic acid type.
|
StrColumn |
PdbxLinkedEntity.getType() |
Defines the structural classification of this molecule.
|
StrColumn |
PdbxMoleculeFeatures.getType() |
Defines the structural classification of the molecule.
|
StrColumn |
PdbxMoleculeFeaturesDepositorInfo.getType() |
Defines the structural classification of the molecule.
|
StrColumn |
PdbxNmrExptl.getType() |
The type of NMR experiment.
|
StrColumn |
PdbxNmrSampleDetails.getType() |
A descriptive term for the sample that defines the general physical properties
of the sample.
|
StrColumn |
PdbxNmrSpectrometer.getType() |
Select the instrument manufacturer(s) and the model(s) of the NMR(s)
used for this work.
|
StrColumn |
PdbxNmrSystematicChemShiftOffset.getType() |
The kind of chemical shift offset that should be applied to all chemical
shifts observed for a specific type of atom.
|
StrColumn |
PdbxReferenceEntityList.getType() |
Defines the polymer characteristic of the entity.
|
StrColumn |
PdbxReferenceEntityPoly.getType() |
The type of the polymer.
|
StrColumn |
PdbxReferenceEntitySequence.getType() |
The monomer type for the sequence.
|
StrColumn |
PdbxReferenceMolecule.getType() |
Defines the structural classification of the entity.
|
StrColumn |
PdbxReferenceMoleculeAnnotation.getType() |
Type of annotation for this entity.
|
StrColumn |
PdbxReferenceMoleculeFeatures.getType() |
The entity feature type.
|
StrColumn |
PdbxRefineLsRestrNcs.getType() |
The the type of restraint applied to the domain
specified by _pdbx_refine_ls_restr_ncs.dom_id and in the domains
against which it was restrained.
|
StrColumn |
PdbxReflnsTwin.getType() |
There are two types of twinning: merohedral or hemihedral
non-merohedral or epitaxial
For merohedral twinning the diffraction patterns from the different domains are
completely superimposable.
|
StrColumn |
PdbxRobotSystem.getType() |
The type of robotic system used for in the production pathway.
|
StrColumn |
PdbxSolnScatter.getType() |
The type of solution scattering experiment carried out
|
StrColumn |
PdbxStructAssemblyProp.getType() |
The property type for the assembly.
|
StrColumn |
PdbxStructAssemblyPropDepositorInfo.getType() |
The property type for the assembly.
|
StrColumn |
PdbxStructChemCompDiagnostics.getType() |
A classification of the diagnostic for the chemical
component instance
|
StrColumn |
PdbxStructChemCompFeature.getType() |
A classification of the annotation for the chemical
component instance
|
StrColumn |
PdbxStructGroupList.getType() |
A selected list of group types.
|
StrColumn |
PdbxStructInfo.getType() |
The information category/type for this item.
|
StrColumn |
PdbxStructLink.getType() |
The chemical or structural type of the interaction.
|
StrColumn |
PdbxStructOperList.getType() |
A code to indicate the type of operator.
|
StrColumn |
PdbxStructOperListDepositorInfo.getType() |
A code to indicate the type of operator.
|
StrColumn |
PdbxStructRefSeqFeature.getType() |
A classification of the feature
|
StrColumn |
PdbxStructRefSeqFeatureProp.getType() |
Property type.
|
StrColumn |
PdbxValidatePlanes.getType() |
The type of plane - MAIN CHAIN or SIDE CHAIN atoms
|
StrColumn |
RefineFunctMinimized.getType() |
The type of the function being minimized.
|
StrColumn |
RefineLsRestr.getType() |
The type of the parameter being restrained.
|
StrColumn |
RefineLsRestrType.getType() |
This data item is a pointer to _refine_ls_restr.type in the
REFINE_LS_RESTR category.
|
StrColumn |
Software.getType() |
The classification of the software according to the most
common types.
|
StrColumn |
StructSheet.getType() |
A simple descriptor for the type of the sheet.
|
StrColumn |
ChemCompLink.getTypeComp1() |
The type of the first of the two components joined by the
link.
|
StrColumn |
ChemCompLink.getTypeComp2() |
The type of the second of the two components joined by the
link.
|
StrColumn |
EntityPoly.getTypeDetails() |
A description of special aspects of the polymer type.
|
StrColumn |
PdbxReferenceMolecule.getTypeEvidenceCode() |
Evidence for the assignment of _pdbx_reference_molecule.type
|
StrColumn |
AtomSite.getTypeSymbol() |
This data item is a pointer to _atom_type.symbol in the
ATOM_TYPE category.
|
StrColumn |
AtomSiteAnisotrop.getTypeSymbol() |
This data item is a pointer to _atom_type.symbol in the
ATOM_TYPE category.
|
StrColumn |
ChemCompAtom.getTypeSymbol() |
The code used to identify the atom species representing
this atom type.
|
StrColumn |
ChemicalConnAtom.getTypeSymbol() |
This data item is a pointer to _atom_type.symbol in the
ATOM_TYPE category.
|
StrColumn |
IhmStartingModelCoord.getTypeSymbol() |
The atom type symbol(element symbol) corresponding to this coordinate position.
|
StrColumn |
PdbxAtomSiteAnisoTls.getTypeSymbol() |
This data item is a pointer to _atom_type.symbol in the
ATOM_TYPE category.
|
StrColumn |
PdbxChemCompModelAtom.getTypeSymbol() |
The code used to identify the atom species representing
this atom type.
|
StrColumn |
PdbxConnectAtom.getTypeSymbol() |
Element symbol
|
StrColumn |
PdbxNmrSpectralDim.getUnderSamplingType() |
The type of spectral folding/aliasing that was used or occurred when the spectrum was collected.
|
StrColumn |
PdbxDccDensity.getUnitCell() |
The unit cell parameters (a b c alpha beta gamma) separated
by a space.
|
StrColumn |
EmEntityAssemblyMolwt.getUnits() |
Molecular weight units.
|
StrColumn |
Citation.getUnpublishedFlag() |
Flag to indicate that this citation will not be published.
|
StrColumn |
Audit.getUpdateRecord() |
A record of any changes to the data block.
|
StrColumn |
EmFigureDepositorInfo.getUploadFileName() |
The name of the image file associated with the map entry
|
StrColumn |
EmLayerLinesDepositorInfo.getUploadFileName() |
The name of the layer line file associated with the map entry
|
StrColumn |
EmMapDepositorInfo.getUploadFileName() |
The name of a file containing the map.
|
StrColumn |
EmMaskDepositorInfo.getUploadFileName() |
The name of a file containing the map.
|
StrColumn |
EmStructureFactorsDepositorInfo.getUploadFileName() |
The name of the structure factor file associated with the map entry
|
StrColumn |
PdbxChemCompUploadDepositorInfo.getUploadFileName() |
The name of the uploaded file containing information about this component.
|
StrColumn |
PdbxStructAssemblyDepositorInfo.getUploadFileName() |
The name of a file containing matrix records.
|
StrColumn |
PdbxChemCompUploadDepositorInfo.getUploadFileType() |
The type of the uploaded file containing information about this component.
|
StrColumn |
EmMapDepositorInfo.getUploadFormat() |
map format
|
StrColumn |
EmMaskDepositorInfo.getUploadFormat() |
map format
|
StrColumn |
EmImageScans.getUsedFramesPerImage() |
Range of time-slice (movie) frames used for the reconstruction.
|
StrColumn |
PdbxDepuiStatusFlags.getUseSasRefine() |
A flag to indicate whether related SAXS/SANS data were used in refinement
|
StrColumn |
PdbxDepuiEntryDetails.getValidatedContactEmail() |
The validated contact e-mail address for the correponding depositor.
|
StrColumn |
PdbxDepuiStatusFlags.getValidatedModelFileName() |
The the last validation report operation, the name of the model file last validated.
|
StrColumn |
PdbxDepuiUpload.getValidFlag() |
A flag to indicate if the uploaded data is satisfies a
preliminary validation criteria.
|
StrColumn |
PdbxChemCompFeature.getValue() |
The component feature value.
|
StrColumn |
PdbxEntitySrcGenProdOtherParameter.getValue() |
The value of the parameter
|
StrColumn |
PdbxReferenceMoleculeFeatures.getValue() |
The entity feature value.
|
StrColumn |
PdbxStructAssemblyProp.getValue() |
The value of the assembly property.
|
StrColumn |
PdbxStructAssemblyPropDepositorInfo.getValue() |
The value of the assembly property.
|
StrColumn |
PdbxStructInfo.getValue() |
The value of this information item.
|
StrColumn |
PdbxStructRefSeqFeatureProp.getValue() |
Property value.
|
StrColumn |
ChemCompBond.getValueOrder() |
The value that should be taken as the target for the chemical
bond associated with the specified atoms, expressed as a bond
order.
|
StrColumn |
ChemLinkBond.getValueOrder() |
The value that should be taken as the target for the chemical
bond associated with the specified atoms, expressed as a bond
order.
|
StrColumn |
PdbxChemCompModelBond.getValueOrder() |
The value that should be taken as the target for the chemical
bond associated with the specified atoms, expressed as a bond
order.
|
StrColumn |
PdbxEntityBranchLink.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxEntityPolyCompLinkList.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxLinkedEntityLinkList.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxReferenceEntityLink.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxReferenceEntityPolyLink.getValueOrder() |
The bond order target for the non-standard linkage.
|
StrColumn |
PdbxReferenceLinkedEntityCompLink.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxReferenceLinkedEntityLink.getValueOrder() |
The bond order target for the chemical linkage.
|
StrColumn |
PdbxEntitySrcGenClone.getVectorDetails() |
Details of any modifications made to the named vector.
|
StrColumn |
PdbxEntitySrcGenClone.getVectorName() |
The name of the vector used in this cloning step.
|
StrColumn |
PdbxEntitySrcGenExpress.getVectorType() |
Identifies the type of vector used (plasmid, virus, or cosmid)
in the expression system.
|
StrColumn |
PdbxEntitySrcGenClone.getVerificationMethod() |
The method used to verify that the incorporated gene is correct
|
StrColumn |
EmSoftware.getVersion() |
The version of the software.
|
StrColumn |
IhmDatasetRelatedDbReference.getVersion() |
Version of the database entry, if the database allows versioning.
|
StrColumn |
PdbxNmrSoftware.getVersion() |
The version of the software.
|
StrColumn |
Software.getVersion() |
The version of the software.
|
StrColumn |
PdbxDepositionMessageFileReference.getVersionId() |
The version identifier of the referenced data file.
|
StrColumn |
PdbxViewCategory.getViewGroupId() |
A pointer to the view_group_id in the PDBX_VIEW_CATEGORY_GROUP category.
|
StrColumn |
PdbxViewCategoryGroup.getViewGroupId() |
The identifier for a collection of related mmCIF categories.
|
StrColumn |
EmVirusEntity.getVirusHostCategory() |
The host category description for the virus.
|
StrColumn |
EmVirusEntity.getVirusHostGrowthCell() |
The host cell from which the virus was isolated.
|
StrColumn |
EmVirusEntity.getVirusHostSpecies() |
The host species from which the virus was isolated.
|
StrColumn |
EmVirusEntity.getVirusIsolate() |
The isolate from which the virus was obtained.
|
StrColumn |
EmVirusEntity.getVirusType() |
The type of virus.
|
StrColumn |
EmSpecimen.getVitrificationApplied() |
'YES' indicates that the specimen was vitrified by cryopreservation.
|
StrColumn |
ExptlCrystalGrowComp.getVolume() |
The volume of the solution component.
|
StrColumn |
Journal.getVolume() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxBufferComponents.getVolume() |
The volume of buffer component.
|
StrColumn |
ChemCompChir.getVolumeFlag() |
A flag to indicate whether a chiral volume should match the
standard value in both magnitude and sign, or in magnitude only.
|
StrColumn |
ChemLinkChir.getVolumeFlag() |
A flag to indicate whether a chiral volume should match the
standard value in both magnitude and sign, or in magnitude only.
|
StrColumn |
PdbxExptlCrystalGrowSol.getVolumeUnits() |
The volume units of the solution.
|
StrColumn |
PhasingMADSet.getWavelengthDetails() |
A descriptor for this wavelength in this cluster of data sets.
|
StrColumn |
DiffrnRadiation.getWavelengthId() |
This data item is a pointer to _diffrn_radiation_wavelength.id
in the DIFFRN_RADIATION_WAVELENGTH category.
|
StrColumn |
DiffrnRefln.getWavelengthId() |
This data item is a pointer to _diffrn_radiation.wavelength_id in
the DIFFRN_RADIATION category.
|
StrColumn |
Refln.getWavelengthId() |
This data item is a pointer to _diffrn_radiation.wavelength_id in
the DIFFRN_RADIATION category.
|
StrColumn |
PdbxDepuiEntryDetails.getWwpdbSiteId() |
The wwPDB internal site configuration identifier.
|
StrColumn |
AtomSite.getWyckoffSymbol() |
The Wyckoff symbol (letter) as listed in the space-group tables
of International Tables for Crystallography, Vol.
|
StrColumn |
PdbxSerialCrystallographyDataReduction.getXfelRunNumbers() |
For FEL experiments, in which data collection was performed
in batches, indicates which subset of the data collected
were used in producing this dataset.
|
StrColumn |
DiffrnRadiation.getXraySymbol() |
The IUPAC symbol for the X-ray wavelength for the probe
radiation.
|
StrColumn |
Journal.getYear() |
Journal data items are defined by the journal staff.
|
StrColumn |
PdbxEntitySrcGenChrom.getYieldMethod() |
The method used to determine the yield
|