Package org.rcsb.cif.schema.mm

Class ChemLinkTorValue

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.ChemLinkTorValue
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class ChemLinkTorValue
extends DelegatingCategory
Data items in the CHEM_LINK_TOR_VALUE category record details about the target values for the torsion angles enumerated in the CHEM_LINK_TOR list. Target values may be specified as angles in degrees, as a distance between the first and fourth atoms, or both.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getTorId

      public StrColumn getTorId()
      This data item is a pointer to _chem_link_tor.id in the CHEM_LINK_TOR category.
      Returns:
      StrColumn

    • getAngle

      public FloatColumn getAngle()
      A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed in degrees.
      Returns:
      FloatColumn

    • getAngleEsd

      public FloatColumn getAngleEsd()
      The standard uncertainty (estimated standard deviation) of _chem_link_tor_value.angle.
      Returns:
      FloatColumn

    • getDist

      public FloatColumn getDist()
      A value that should be taken as a potential target value for the torsion angle associated with the specified atoms, expressed as the distance between the atoms specified by _chem_link_tor.atom_id_1 and _chem_link_tor.atom_id_4 in the referenced record in the CHEM_LINK_TOR list. Note that the torsion angle cannot be fully specified by a distance (for instance, a torsion angle of -60 degree will yield the same distance as a 60 degree angle). However, the distance specification can be useful for refinement in situations in which the angle is already close to the desired value.
      Returns:
      FloatColumn

    • getDistEsd

      public FloatColumn getDistEsd()
      The standard uncertainty (estimated standard deviation) of _chem_link_tor_value.dist.
      Returns:
      FloatColumn