Package org.rcsb.cif.schema.mm

Class DatabasePDBMatrix

java.lang.Object

org.rcsb.cif.schema.DelegatingCategory

org.rcsb.cif.schema.mm.DatabasePDBMatrix

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class DatabasePDBMatrix
extends DelegatingCategory

The DATABASE_PDB_MATRIX category provides placeholders for transformation matrices and vectors used by the Protein Data Bank (PDB). These data items are included only for consistency with older PDB format files. They should appear in a data block only if that data block was created by reformatting a PDB format file.

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory

Nested classes/interfaces inherited from interface org.rcsb.cif.model.Category

Category.EmptyCategory

Field Summary

Fields inherited from class org.rcsb.cif.schema.DelegatingCategory

delegate

Constructor Summary

Constructors

Constructor	Description
DatabasePDBMatrix(Category delegate)

Method Summary

Modifier and Type	Method	Description
protected Column	createDelegate(String columnName, Column column)
StrColumn	getEntryId()	This data item is a pointer to _entry.id in the ENTRY category.
FloatColumn	getOrigx11()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx12()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx13()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx21()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx22()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx23()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx31()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx32()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigx33()	The elements of the PDB ORIGX matrix.
FloatColumn	getOrigxVector1()	The elements of the PDB ORIGX vector.
FloatColumn	getOrigxVector2()	The elements of the PDB ORIGX vector.
FloatColumn	getOrigxVector3()	The elements of the PDB ORIGX vector.
FloatColumn	getScale11()	The elements of the PDB SCALE matrix.
FloatColumn	getScale12()	The elements of the PDB SCALE matrix.
FloatColumn	getScale13()	The elements of the PDB SCALE matrix.
FloatColumn	getScale21()	The elements of the PDB SCALE matrix.
FloatColumn	getScale22()	The elements of the PDB SCALE matrix.
FloatColumn	getScale23()	The elements of the PDB SCALE matrix.
FloatColumn	getScale31()	The elements of the PDB SCALE matrix.
FloatColumn	getScale32()	The elements of the PDB SCALE matrix.
FloatColumn	getScale33()	The elements of the PDB SCALE matrix.
FloatColumn	getScaleVector1()	The elements of the PDB SCALE vector.
FloatColumn	getScaleVector2()	The elements of the PDB SCALE vector.
FloatColumn	getScaleVector3()	The elements of the PDB SCALE vector.

Methods inherited from class org.rcsb.cif.schema.DelegatingCategory

getCategoryName, getColumn, getColumns, getRowCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columns, getColumn, isDefined

Constructor Details

DatabasePDBMatrix

public DatabasePDBMatrix(Category delegate)

Method Details

createDelegate

protected Column createDelegate(String columnName, Column column)

Overrides:

createDelegate in class DelegatingCategory

getEntryId

public StrColumn getEntryId()

This data item is a pointer to _entry.id in the ENTRY category.

Returns:

StrColumn

getOrigx11

public FloatColumn getOrigx11()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx12

public FloatColumn getOrigx12()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx13

public FloatColumn getOrigx13()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx21

public FloatColumn getOrigx21()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx22

public FloatColumn getOrigx22()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx23

public FloatColumn getOrigx23()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx31

public FloatColumn getOrigx31()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx32

public FloatColumn getOrigx32()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigx33

public FloatColumn getOrigx33()

The elements of the PDB ORIGX matrix.

Returns:

FloatColumn

getOrigxVector1

public FloatColumn getOrigxVector1()

The elements of the PDB ORIGX vector.

Returns:

FloatColumn

getOrigxVector2

public FloatColumn getOrigxVector2()

The elements of the PDB ORIGX vector.

Returns:

FloatColumn

getOrigxVector3

public FloatColumn getOrigxVector3()

The elements of the PDB ORIGX vector.

Returns:

FloatColumn

getScale11

public FloatColumn getScale11()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale12

public FloatColumn getScale12()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale13

public FloatColumn getScale13()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale21

public FloatColumn getScale21()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale22

public FloatColumn getScale22()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale23

public FloatColumn getScale23()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale31

public FloatColumn getScale31()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale32

public FloatColumn getScale32()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScale33

public FloatColumn getScale33()

The elements of the PDB SCALE matrix.

Returns:

FloatColumn

getScaleVector1

public FloatColumn getScaleVector1()

The elements of the PDB SCALE vector.

Returns:

FloatColumn

getScaleVector2

public FloatColumn getScaleVector2()

The elements of the PDB SCALE vector.

Returns:

FloatColumn

getScaleVector3

public FloatColumn getScaleVector3()

The elements of the PDB SCALE vector.

Returns:

FloatColumn