Package org.rcsb.cif.schema.mm

Class Em2dCrystalEntity

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.Em2dCrystalEntity
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class Em2dCrystalEntity
extends DelegatingCategory
Data items in the EM_SYMMETRY_2DX category record 2D crystal symmetry parameters utilized in a 3DEM reconstruction.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getAngleGamma

      public FloatColumn getAngleGamma()
      Unit-cell angle gamma in degrees.
      Returns:
      FloatColumn

    • getCSamplingLength

      public FloatColumn getCSamplingLength()
      Length used to sample the reciprocal lattice lines in the c-direction.
      Returns:
      FloatColumn

    • getImageProcessingId

      public StrColumn getImageProcessingId()
      pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.
      Returns:
      StrColumn

    • getId

      public StrColumn getId()
      Unique key for the 2d_crystal_entity category.
      Returns:
      StrColumn

    • getEntityAssemblyId

      public StrColumn getEntityAssemblyId()
      Corresponding key in _em_entity_assembly category.
      Returns:
      StrColumn

    • getLengthA

      public FloatColumn getLengthA()
      Unit-cell length a in Angstroms.
      Returns:
      FloatColumn

    • getLengthB

      public FloatColumn getLengthB()
      Unit-cell length b in Angstroms.
      Returns:
      FloatColumn

    • getLengthC

      public FloatColumn getLengthC()
      Thickness of 2D crystal
      Returns:
      FloatColumn

    • getSpaceGroupNameH_M

      public StrColumn getSpaceGroupNameH_M()
      There are 17 plane groups classified as oblique, rectangular, square, and hexagonal. To describe the symmetry of 2D crystals of biological molecules, plane groups are expanded to equivalent noncentrosymmetric space groups. The 2D crystal plane corresponds to the 'ab' plane of the space group. Enumerated space group descriptions include the plane group number in parentheses, the H-M plane group symbol, and the plane group class.
      Returns:
      StrColumn