Package org.rcsb.cif.schema.mm

Class EmDepui

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.EmDepui
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmDepui
extends DelegatingCategory
Some internal items to power the deposition interface

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getDepositorHoldInstructions

      public StrColumn getDepositorHoldInstructions()
      Choose the manner in which you would like the map and associated files (half maps, additional maps, masks, FSC curves, structure factors, layer lines, and images) to be released. Release of these files can be delayed either until publication of the associated primary citation or until one year after completion of the deposition. It is the responsibility of the depositor to notify the EMDB when the primary citation has been published. Please note that map-associated experimental information and metadata (header data) are made available to the public when an entry is placed on hold.
      Returns:
      StrColumn

    • getEntryId

      public StrColumn getEntryId()
      Primary key
      Returns:
      StrColumn

    • getMacromoleculeDescription

      public StrColumn getMacromoleculeDescription()
      Indicates whether the authors are providing a macromolecule level description of their sample
      Returns:
      StrColumn

    • getObsoleteInstructions

      public StrColumn getObsoleteInstructions()
      Instruction for annotators on why a previous released entry should be obsoleted. Example of valid request: * Author wants to replace a map that has already been released, following discovery of a processing error Examples of invalid requests: * Someone other than the author wants to obsolete a map. * Legal conflict of interest Obsoletion is not required for the following actions: * to change released metadata info. * to update the map of an HPUB entry. * to change the hand of a released map. * to deposit an improved version of a released map.
      Returns:
      StrColumn

    • getSameAuthorsAsPdb

      public StrColumn getSameAuthorsAsPdb()
      Indicates whether the authors for the EMDB entry are the same as for the PDB entry in a joint map + model deposition
      Returns:
      StrColumn

    • getSameTitleAsPdb

      public StrColumn getSameTitleAsPdb()
      Indicates whether the title for the EMDB entry is the same as for the PDB entry in a joint map + model deposition
      Returns:
      StrColumn