Package org.rcsb.cif.schema.mm

Class EmEntityAssemblyNaturalsource

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.EmEntityAssemblyNaturalsource
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmEntityAssemblyNaturalsource
extends DelegatingCategory
Data items in this category record taxonomic details about the natural source for EM assemblies and assembly components.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getCell

      public StrColumn getCell()
      The cell type from which the component was obtained.
      Returns:
      StrColumn

    • getCellularLocation

      public StrColumn getCellularLocation()
      The cellular location of the component.
      Returns:
      StrColumn

    • getEntityAssemblyId

      public StrColumn getEntityAssemblyId()
      Pointer to the assembly component defined in the EM ENTITY ASSEMBLY category.
      Returns:
      StrColumn

    • getId

      public StrColumn getId()
      Ordinal key for the em_entity_assembly_naturalsource category.
      Returns:
      StrColumn

    • getNcbiTaxId

      public IntColumn getNcbiTaxId()
      The NCBI taxonomy id for the natural organism source of the component.
      Returns:
      IntColumn

    • getOrganism

      public StrColumn getOrganism()
      The genus-species of the natural organism from which the component was obtained.
      Returns:
      StrColumn

    • getOrganelle

      public StrColumn getOrganelle()
      The organelle from which the component was obtained.
      Returns:
      StrColumn

    • getOrgan

      public StrColumn getOrgan()
      The organ of the organism from which the component was obtained.
      Returns:
      StrColumn

    • getStrain

      public StrColumn getStrain()
      The strain of the natural organism from which the component was obtained, if relevant.
      Returns:
      StrColumn

    • getTissue

      public StrColumn getTissue()
      The tissue of the natural organism from which the component was obtained.
      Returns:
      StrColumn