Package org.rcsb.cif.schema.mm

Class EmHelicalEntity

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.EmHelicalEntity
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmHelicalEntity
extends DelegatingCategory
Data items in the EM_HELICAL_ENTITY category record details for a helical or filament type of assembly component.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getId

      public StrColumn getId()
      The value of _em_helical_entity.id must uniquely identify a set of the filament parameters for this assembly component.
      Returns:
      StrColumn

    • getEntityAssemblyId

      public StrColumn getEntityAssemblyId()
      The value of _em_helical_entity.entity_assembly_id identifies a particular assembly component. This data item is a pointer to _em_entity_assembly.id in the EM_ENTITY_ASSEMBLY category.
      Returns:
      StrColumn

    • getImageProcessingId

      public StrColumn getImageProcessingId()
      The value of _em_helical_entity.reconstruction_id identifies a particular reconstruction. This data item is a pointer to _em_image_processing.id.
      Returns:
      StrColumn

    • getDetails

      public StrColumn getDetails()
      Any other details regarding the helical assembly
      Returns:
      StrColumn

    • getDyad

      public StrColumn getDyad()
      Value should be YES if a the filament has two-fold symmetry perpendicular to the helical axis.
      Returns:
      StrColumn

    • getAxialSymmetry

      public StrColumn getAxialSymmetry()
      Symmetry of the helical axis, either cyclic (Cn) or dihedral (Dn), where n>=1.
      Returns:
      StrColumn

    • getAngularRotationPerSubunit

      public FloatColumn getAngularRotationPerSubunit()
      The angular rotation per helical subunit in degrees.
      Returns:
      FloatColumn

    • getAxialRisePerSubunit

      public FloatColumn getAxialRisePerSubunit()
      The axial rise per subunit in the helical assembly.
      Returns:
      FloatColumn

    • getHand

      public StrColumn getHand()
      Handedness of the helix: right handed or left handed
      Returns:
      StrColumn