Package org.rcsb.cif.schema.mm

Class EmVirusShell

java.lang.Object

org.rcsb.cif.schema.DelegatingCategory

org.rcsb.cif.schema.mm.EmVirusShell

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmVirusShell
extends DelegatingCategory

Data items in the EMD_VIRUS_SHELL category record details of the viral shell number, shell diameter, and icosahedral triangulation number.

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory

Nested classes/interfaces inherited from interface org.rcsb.cif.model.Category

Category.EmptyCategory

Field Summary

Fields inherited from class org.rcsb.cif.schema.DelegatingCategory

delegate

Constructor Summary

Constructors

Constructor	Description
EmVirusShell(Category delegate)

Method Summary

Modifier and Type	Method	Description
protected Column	createDelegate(String columnName, Column column)
FloatColumn	getDiameter()	The value of the diameter (in angstroms) for this virus shell.
StrColumn	getEntityAssemblyId()	The value of _em_virus_shell.entity_assembly_id is a pointer to _em_entity_assembly.id category.
StrColumn	getId()	The value of _em_em_virus_shell.id is a unique identifier for one virus shell.
StrColumn	getName()	The name for this virus shell.
IntColumn	getTriangulation()	The triangulation number (T number) is a geometric concept that refers to the organisation of subunits within the icosahedron.

Methods inherited from class org.rcsb.cif.schema.DelegatingCategory

getCategoryName, getColumn, getColumns, getRowCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columns, getColumn, isDefined

Constructor Details

EmVirusShell

public EmVirusShell(Category delegate)

Method Details

createDelegate

protected Column createDelegate(String columnName, Column column)

Overrides:

createDelegate in class DelegatingCategory

getDiameter

public FloatColumn getDiameter()

The value of the diameter (in angstroms) for this virus shell.

Returns:

FloatColumn

getEntityAssemblyId

public StrColumn getEntityAssemblyId()

The value of _em_virus_shell.entity_assembly_id is a pointer to _em_entity_assembly.id category.

Returns:

StrColumn

getId

public StrColumn getId()

The value of _em_em_virus_shell.id is a unique identifier for one virus shell.

Returns:

StrColumn

getName

public StrColumn getName()

The name for this virus shell.

Returns:

StrColumn

getTriangulation

public IntColumn getTriangulation()

The triangulation number (T number) is a geometric concept that refers to the organisation of subunits within the icosahedron. The triangulation number, T is given by the relationship T= h*2 + hk +k*2, where h and k are positive integers which define the position of the five-fold vertex on the original hexagonal net.

Returns:

IntColumn