Package org.rcsb.cif.schema.mm

Class EmVitrification

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.EmVitrification
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmVitrification
extends DelegatingCategory
Data items in the EM_VITRIFICATION category record details about the method and cryogen used in rapid freezing of the sample on the grid prior to its insertion in the electron microscope

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getEntryId

      public StrColumn getEntryId()
      This data item is a pointer to _entry.id in the ENTRY category.
      Returns:
      StrColumn

    • getId

      public StrColumn getId()
      The value of _em_vitrification.id must uniquely identify the vitrification procedure.
      Returns:
      StrColumn

    • getSamplePreparationId

      public StrColumn getSamplePreparationId()
      This data item is a pointer to _em_sample_preparation.id in the EM_SAMPLE_PREPARATION category.
      Returns:
      StrColumn

    • getSpecimenId

      public StrColumn getSpecimenId()
      This data item is a pointer to _em_specimen.id
      Returns:
      StrColumn

    • getCryogenName

      public StrColumn getCryogenName()
      This is the name of the cryogen.
      Returns:
      StrColumn

    • getHumidity

      public FloatColumn getHumidity()
      The humidity (%) in the vicinity of the vitrification process.
      Returns:
      FloatColumn

    • getTemp

      public FloatColumn getTemp()
      The vitrification temperature (in degrees Kelvin), e.g., temperature of the plunge instrument cryogen bath.
      Returns:
      FloatColumn

    • getChamberTemperature

      public FloatColumn getChamberTemperature()
      The temperature (in degrees Kelvin) of the sample just prior to vitrification.
      Returns:
      FloatColumn

    • getInstrument

      public StrColumn getInstrument()
      The type of instrument used in the vitrification process.
      Returns:
      StrColumn

    • getMethod

      public StrColumn getMethod()
      The procedure for vitrification.
      Returns:
      StrColumn

    • getTimeResolvedState

      public StrColumn getTimeResolvedState()
      The length of time after an event effecting the sample that vitrification was induced and a description of the event.
      Returns:
      StrColumn

    • getCitationId

      public StrColumn getCitationId()
      This data item is a pointer to _citation.id in the CITATION category.
      Returns:
      StrColumn

    • getDetails

      public StrColumn getDetails()
      Any additional details relating to vitrification.
      Returns:
      StrColumn