Package org.rcsb.cif.schema.mm
Class ExptlCrystalGrowComp
java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.ExptlCrystalGrowComp
- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class ExptlCrystalGrowComp
extends DelegatingCategory
Data items in the EXPTL_CRYSTAL_GROW_COMP category record
details about the components of the solutions that were 'mixed'
(by whatever means) to produce the crystal.
In general, solution 1 is the solution that contains the
molecule to be crystallized and solution 2 is the solution
that contains the precipitant. However, the number of solutions
required to describe the crystallization protocol is not limited
to 2.
Details of the crystallization protocol should be given in
_exptl_crystal_grow_comp.details using the solutions
described in EXPTL_CRYSTAL_GROW_COMP.
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Nested Class Summary
Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory
DelegatingCategory.DelegatingCifCoreCategoryNested classes/interfaces inherited from interface org.rcsb.cif.model.Category
Category.EmptyCategory -
Field Summary
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Constructor Summary
Constructors Constructor Description ExptlCrystalGrowComp(Category delegate) -
Method Summary
Modifier and Type Method Description protected ColumncreateDelegate(String columnName, Column column)StrColumngetConc()The concentration of the solution component.StrColumngetCrystalId()This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.StrColumngetDetails()A description of any special aspects of the solution component.StrColumngetId()The value of _exptl_crystal_grow_comp.id must uniquely identify each item in the EXPTL_CRYSTAL_GROW_COMP list.StrColumngetName()A common name for the component of the solution.StrColumngetPdbxBath()The identification of the cystallization bath.StrColumngetPdbxConcFinal()The concentration of this component in the final crystallization solution.StrColumngetPdbxSalt()The identification of the crystallization salt.StrColumngetPdbxSoakSalt()The identification of the crystallization soaking salt.StrColumngetPdbxSoakSolv()The identification of the crystallization soaking solventStrColumngetPdbxSolv()The identification of the crystallization solvent.StrColumngetSolId()An identifier for the solution to which the given solution component belongs.StrColumngetVolume()The volume of the solution component.Methods inherited from class org.rcsb.cif.schema.DelegatingCategory
getCategoryName, getColumn, getColumns, getRowCount
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Constructor Details
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Method Details
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createDelegate
- Overrides:
createDelegatein classDelegatingCategory
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getConc
The concentration of the solution component.- Returns:
- StrColumn
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getDetails
A description of any special aspects of the solution component. When the solution component is the one that contains the macromolecule, this could be the specification of the buffer in which the macromolecule was stored. When the solution component is a buffer component, this could be the methods (or formula) used to achieve a desired pH.- Returns:
- StrColumn
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getCrystalId
This data item is a pointer to _exptl_crystal.id in the EXPTL_CRYSTAL category.- Returns:
- StrColumn
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getId
The value of _exptl_crystal_grow_comp.id must uniquely identify each item in the EXPTL_CRYSTAL_GROW_COMP list. Note that this item need not be a number; it can be any unique identifier.- Returns:
- StrColumn
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getName
A common name for the component of the solution.- Returns:
- StrColumn
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getSolId
An identifier for the solution to which the given solution component belongs.- Returns:
- StrColumn
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getVolume
The volume of the solution component.- Returns:
- StrColumn
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getPdbxConcFinal
The concentration of this component in the final crystallization solution. This data item should include units of concentration.- Returns:
- StrColumn
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getPdbxBath
The identification of the cystallization bath.- Returns:
- StrColumn
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getPdbxSalt
The identification of the crystallization salt.- Returns:
- StrColumn
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getPdbxSoakSalt
The identification of the crystallization soaking salt.- Returns:
- StrColumn
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getPdbxSoakSolv
The identification of the crystallization soaking solvent- Returns:
- StrColumn
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getPdbxSolv
The identification of the crystallization solvent.- Returns:
- StrColumn
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