Package org.rcsb.cif.schema.mm

Class IhmResiduesNotModeled

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.IhmResiduesNotModeled
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class IhmResiduesNotModeled
extends DelegatingCategory
Data items in the IHM_RESIDUES_NOT_MODELED category record the details of the residues that are defined in the IHM_STRUCT_ASSEMBLY category but are missing in the three-dimensional model (ATOM_SITE, IHM_SPHERE_OBJ_SITE, IHM_GAUSSIAN_OBJ_SITE categories) i.e., residues in the assembly that are not modeled.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getId

      public IntColumn getId()
      A unique identifier for the category.
      Returns:
      IntColumn

    • getModelId

      public IntColumn getModelId()
      An identifier for the structural model. This data item is a pointer to _ihm_model_list.model_id in the IHM_MODEL_LIST category.
      Returns:
      IntColumn

    • getEntityDescription

      public StrColumn getEntityDescription()
      A text description of the molecular entity, whose residues are not modeled. This data item is a pointer to _entity.pdbx_description in the ENTITY category.
      Returns:
      StrColumn

    • getEntityId

      public StrColumn getEntityId()
      A unique identifier to the molecular entity, whose residues are not modeled. This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getAsymId

      public StrColumn getAsymId()
      An asym/strand identifier. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getSeqIdBegin

      public IntColumn getSeqIdBegin()
      The starting residue index for the sequence segment of missing residues. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.
      Returns:
      IntColumn

    • getSeqIdEnd

      public IntColumn getSeqIdEnd()
      The ending residue index for the sequence segment of missing residues. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.
      Returns:
      IntColumn

    • getCompIdBegin

      public StrColumn getCompIdBegin()
      The starting residue for the sequence segment of missing residues. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getCompIdEnd

      public StrColumn getCompIdEnd()
      The ending residue for the sequence segment of missing residues. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getReason

      public StrColumn getReason()
      The reason why the residues are missing in the structural model.
      Returns:
      StrColumn

    • getDetails

      public StrColumn getDetails()
      Additional details regarding the missing segments.
      Returns:
      StrColumn