Package org.rcsb.cif.schema.mm

Class IhmStartingModelDetails

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.IhmStartingModelDetails
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class IhmStartingModelDetails
extends DelegatingCategory
Data items in the IHM_STARTING_MODEL_DETAILS category records the details about structural models used as starting inputs in the integrative model building process.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getStartingModelId

      public StrColumn getStartingModelId()
      A unique identifier for the starting structural model.
      Returns:
      StrColumn

    • getEntityId

      public StrColumn getEntityId()
      A unique identifier for the distinct molecular entities. This data item is a pointer to _entity.id in the ENTITY category.
      Returns:
      StrColumn

    • getEntityDescription

      public StrColumn getEntityDescription()
      A text description of the molecular entity
      Returns:
      StrColumn

    • getAsymId

      public StrColumn getAsymId()
      An asym/strand identifier for the entity molecule. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getEntityPolySegmentId

      public IntColumn getEntityPolySegmentId()
      The identifier for the polymeric segment modeled using this starting model. This data item is a pointer to _ihm_entity_poly_segment.id in the IHM_ENTITY_POLY_SEGMENT category.
      Returns:
      IntColumn

    • getStartingModelSource

      public StrColumn getStartingModelSource()
      The source of the starting model.
      Returns:
      StrColumn

    • getStartingModelAuthAsymId

      public StrColumn getStartingModelAuthAsymId()
      The author assigned chainId/auth_asym_id corresponding to this starting model. This corresponds to the chainId/auth_asym_id of the experimental models in the PDB or comparative models in the Model Archive or the starting models referenced via a DOI. If starting models are included in IHM_STARTING_MODEL_COORD, then this will be the same as _ihm_starting_model_details.asym_id.
      Returns:
      StrColumn

    • getStartingModelSequenceOffset

      public IntColumn getStartingModelSequenceOffset()
      The offset in residue numbering between the starting model and the deposited I/H model, if applicable. I/H model residue number = Starting model residue number + offset
      Returns:
      IntColumn

    • getDatasetListId

      public IntColumn getDatasetListId()
      Identifier to the starting model (comparative, experimental or integrative) used as input in the integrative modeling. This data item is a pointer to the _ihm_dataset_list.id in the IHM_DATASET_LIST category.
      Returns:
      IntColumn

    • getDescription

      public StrColumn getDescription()
      Additional description regarding the starting model.
      Returns:
      StrColumn