Package org.rcsb.cif.schema.mm

Class MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder

java.lang.Object

org.rcsb.cif.model.builder.CategoryBuilderImpl<MmCifBlockBuilder,MmCifFileBuilder>

org.rcsb.cif.schema.mm.MmCifCategoryBuilder

org.rcsb.cif.schema.mm.MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder

All Implemented Interfaces:

CategoryBuilder<MmCifBlockBuilder,MmCifFileBuilder>

Enclosing class:

MmCifCategoryBuilder

public static class MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder
extends MmCifCategoryBuilder

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.mm.MmCifCategoryBuilder

MmCifCategoryBuilder.AtomSiteAnisotropBuilder, MmCifCategoryBuilder.AtomSiteBuilder, MmCifCategoryBuilder.AtomSitesAltBuilder, MmCifCategoryBuilder.AtomSitesAltEnsBuilder, MmCifCategoryBuilder.AtomSitesAltGenBuilder, MmCifCategoryBuilder.AtomSitesBuilder, MmCifCategoryBuilder.AtomSitesFootnoteBuilder, MmCifCategoryBuilder.AtomTypeBuilder, MmCifCategoryBuilder.AuditAuthorBuilder, MmCifCategoryBuilder.AuditBuilder, MmCifCategoryBuilder.AuditConformBuilder, MmCifCategoryBuilder.AuditContactAuthorBuilder, MmCifCategoryBuilder.AuditLinkBuilder, MmCifCategoryBuilder.CellBuilder, MmCifCategoryBuilder.CellMeasurementBuilder, MmCifCategoryBuilder.CellMeasurementReflnBuilder, MmCifCategoryBuilder.ChemCompAngleBuilder, MmCifCategoryBuilder.ChemCompAtomBuilder, MmCifCategoryBuilder.ChemCompBondBuilder, MmCifCategoryBuilder.ChemCompBuilder, MmCifCategoryBuilder.ChemCompChirAtomBuilder, MmCifCategoryBuilder.ChemCompChirBuilder, MmCifCategoryBuilder.ChemCompLinkBuilder, MmCifCategoryBuilder.ChemCompPlaneAtomBuilder, MmCifCategoryBuilder.ChemCompPlaneBuilder, MmCifCategoryBuilder.ChemCompTorBuilder, MmCifCategoryBuilder.ChemCompTorValueBuilder, MmCifCategoryBuilder.ChemicalBuilder, MmCifCategoryBuilder.ChemicalConnAtomBuilder, MmCifCategoryBuilder.ChemicalConnBondBuilder, MmCifCategoryBuilder.ChemicalFormulaBuilder, MmCifCategoryBuilder.ChemLinkAngleBuilder, MmCifCategoryBuilder.ChemLinkBondBuilder, MmCifCategoryBuilder.ChemLinkBuilder, MmCifCategoryBuilder.ChemLinkChirAtomBuilder, MmCifCategoryBuilder.ChemLinkChirBuilder, MmCifCategoryBuilder.ChemLinkPlaneAtomBuilder, MmCifCategoryBuilder.ChemLinkPlaneBuilder, MmCifCategoryBuilder.ChemLinkTorBuilder, MmCifCategoryBuilder.ChemLinkTorValueBuilder, MmCifCategoryBuilder.CitationAuthorBuilder, MmCifCategoryBuilder.CitationBuilder, MmCifCategoryBuilder.CitationEditorBuilder, MmCifCategoryBuilder.ComputingBuilder, MmCifCategoryBuilder.Database2Builder, MmCifCategoryBuilder.DatabaseBuilder, MmCifCategoryBuilder.DatabasePDBCaveatBuilder, MmCifCategoryBuilder.DatabasePDBMatrixBuilder, MmCifCategoryBuilder.DatabasePDBRemarkBuilder, MmCifCategoryBuilder.DatabasePDBRevBuilder, MmCifCategoryBuilder.DatabasePDBRevRecordBuilder, MmCifCategoryBuilder.DatabasePDBTvectBuilder, MmCifCategoryBuilder.DiffrnAttenuatorBuilder, MmCifCategoryBuilder.DiffrnBuilder, MmCifCategoryBuilder.DiffrnDetectorBuilder, MmCifCategoryBuilder.DiffrnMeasurementBuilder, MmCifCategoryBuilder.DiffrnOrientMatrixBuilder, MmCifCategoryBuilder.DiffrnOrientReflnBuilder, MmCifCategoryBuilder.DiffrnRadiationBuilder, MmCifCategoryBuilder.DiffrnRadiationWavelengthBuilder, MmCifCategoryBuilder.DiffrnReflnBuilder, MmCifCategoryBuilder.DiffrnReflnsBuilder, MmCifCategoryBuilder.DiffrnReflnsClassBuilder, MmCifCategoryBuilder.DiffrnScaleGroupBuilder, MmCifCategoryBuilder.DiffrnSourceBuilder, MmCifCategoryBuilder.DiffrnStandardReflnBuilder, MmCifCategoryBuilder.DiffrnStandardsBuilder, MmCifCategoryBuilder.Em2dCrystalEntityBuilder, MmCifCategoryBuilder.Em2dProjectionSelectionBuilder, MmCifCategoryBuilder.Em3dCrystalEntityBuilder, MmCifCategoryBuilder.Em3dFittingBuilder, MmCifCategoryBuilder.Em3dFittingListBuilder, MmCifCategoryBuilder.Em3dReconstructionBuilder, MmCifCategoryBuilder.EmAdminBuilder, MmCifCategoryBuilder.EmAssemblyBuilder, MmCifCategoryBuilder.EmAuthorListBuilder, MmCifCategoryBuilder.EmBufferBuilder, MmCifCategoryBuilder.EmBufferComponentBuilder, MmCifCategoryBuilder.EmCrystalFormationBuilder, MmCifCategoryBuilder.EmCtfCorrectionBuilder, MmCifCategoryBuilder.EmDbReferenceAuxiliaryBuilder, MmCifCategoryBuilder.EmDbReferenceBuilder, MmCifCategoryBuilder.EmDepositorInfoBuilder, MmCifCategoryBuilder.EmDepuiBuilder, MmCifCategoryBuilder.EmDetectorBuilder, MmCifCategoryBuilder.EmDiffractionBuilder, MmCifCategoryBuilder.EmDiffractionShellBuilder, MmCifCategoryBuilder.EmDiffractionStatsBuilder, MmCifCategoryBuilder.EmEmbeddingBuilder, MmCifCategoryBuilder.EmEntityAssemblyBuilder, MmCifCategoryBuilder.EmEntityAssemblyMolwtBuilder, MmCifCategoryBuilder.EmEntityAssemblyNaturalsourceBuilder, MmCifCategoryBuilder.EmEntityAssemblyRecombinantBuilder, MmCifCategoryBuilder.EmEulerAngleAssignmentBuilder, MmCifCategoryBuilder.EmExperimentBuilder, MmCifCategoryBuilder.EmFiducialMarkersBuilder, MmCifCategoryBuilder.EmFigureDepositorInfoBuilder, MmCifCategoryBuilder.EmFinalClassificationBuilder, MmCifCategoryBuilder.EmFocusedIonBeamBuilder, MmCifCategoryBuilder.EmFscCurveBuilder, MmCifCategoryBuilder.EmGridPretreatmentBuilder, MmCifCategoryBuilder.EmHelicalEntityBuilder, MmCifCategoryBuilder.EmHighPressureFreezingBuilder, MmCifCategoryBuilder.EmImageProcessingBuilder, MmCifCategoryBuilder.EmImageRecordingBuilder, MmCifCategoryBuilder.EmImageScansBuilder, MmCifCategoryBuilder.EmImagingBuilder, MmCifCategoryBuilder.EmImagingOpticsBuilder, MmCifCategoryBuilder.EmInterpretFigureBuilder, MmCifCategoryBuilder.EmLayerLinesBuilder, MmCifCategoryBuilder.EmLayerLinesDepositorInfoBuilder, MmCifCategoryBuilder.EmMapBuilder, MmCifCategoryBuilder.EmMapDepositorInfoBuilder, MmCifCategoryBuilder.EmMaskDepositorInfoBuilder, MmCifCategoryBuilder.EmObsoleteBuilder, MmCifCategoryBuilder.EmParticleSelectionBuilder, MmCifCategoryBuilder.EmSamplePreparationBuilder, MmCifCategoryBuilder.EmSampleSupportBuilder, MmCifCategoryBuilder.EmShadowingBuilder, MmCifCategoryBuilder.EmSingleParticleEntityBuilder, MmCifCategoryBuilder.EmSoftwareBuilder, MmCifCategoryBuilder.EmSpecimenBuilder, MmCifCategoryBuilder.EmStainingBuilder, MmCifCategoryBuilder.EmStartModelBuilder, MmCifCategoryBuilder.EmStructureFactorsBuilder, MmCifCategoryBuilder.EmStructureFactorsDepositorInfoBuilder, MmCifCategoryBuilder.EmSupersedeBuilder, MmCifCategoryBuilder.EmSupportFilmBuilder, MmCifCategoryBuilder.EmTomographyBuilder, MmCifCategoryBuilder.EmTomographySpecimenBuilder, MmCifCategoryBuilder.EmUltramicrotomyBuilder, MmCifCategoryBuilder.EmVirusEntityBuilder, MmCifCategoryBuilder.EmVirusNaturalHostBuilder, MmCifCategoryBuilder.EmVirusShellBuilder, MmCifCategoryBuilder.EmVitrificationBuilder, MmCifCategoryBuilder.EmVolumeSelectionBuilder, MmCifCategoryBuilder.EntityBuilder, MmCifCategoryBuilder.EntityKeywordsBuilder, MmCifCategoryBuilder.EntityLinkBuilder, MmCifCategoryBuilder.EntityNameComBuilder, MmCifCategoryBuilder.EntityNameSysBuilder, MmCifCategoryBuilder.EntityPolyBuilder, MmCifCategoryBuilder.EntityPolySeqBuilder, MmCifCategoryBuilder.EntitySrcGenBuilder, MmCifCategoryBuilder.EntitySrcNatBuilder, MmCifCategoryBuilder.EntryBuilder, MmCifCategoryBuilder.EntryLinkBuilder, MmCifCategoryBuilder.ExptlBuilder, MmCifCategoryBuilder.ExptlCrystalBuilder, MmCifCategoryBuilder.ExptlCrystalFaceBuilder, MmCifCategoryBuilder.ExptlCrystalGrowBuilder, MmCifCategoryBuilder.ExptlCrystalGrowCompBuilder, MmCifCategoryBuilder.GeomAngleBuilder, MmCifCategoryBuilder.GeomBondBuilder, MmCifCategoryBuilder.GeomBuilder, MmCifCategoryBuilder.GeomContactBuilder, MmCifCategoryBuilder.GeomHbondBuilder, MmCifCategoryBuilder.GeomTorsionBuilder, MmCifCategoryBuilder.Ihm2demClassAverageFittingBuilder, MmCifCategoryBuilder.Ihm2demClassAverageRestraintBuilder, MmCifCategoryBuilder.Ihm3demRestraintBuilder, MmCifCategoryBuilder.IhmChemicalComponentDescriptorBuilder, MmCifCategoryBuilder.IhmCrossLinkListBuilder, MmCifCategoryBuilder.IhmCrossLinkPseudoSiteBuilder, MmCifCategoryBuilder.IhmCrossLinkRestraintBuilder, MmCifCategoryBuilder.IhmCrossLinkResultBuilder, MmCifCategoryBuilder.IhmCrossLinkResultParametersBuilder, MmCifCategoryBuilder.IhmDatasetExternalReferenceBuilder, MmCifCategoryBuilder.IhmDatasetGroupBuilder, MmCifCategoryBuilder.IhmDatasetGroupLinkBuilder, MmCifCategoryBuilder.IhmDatasetListBuilder, MmCifCategoryBuilder.IhmDatasetRelatedDbReferenceBuilder, MmCifCategoryBuilder.IhmDataTransformationBuilder, MmCifCategoryBuilder.IhmDerivedAngleRestraintBuilder, MmCifCategoryBuilder.IhmDerivedDihedralRestraintBuilder, MmCifCategoryBuilder.IhmDerivedDistanceRestraintBuilder, MmCifCategoryBuilder.IhmEnsembleInfoBuilder, MmCifCategoryBuilder.IhmEnsembleSubSampleBuilder, MmCifCategoryBuilder.IhmEntityPolySegmentBuilder, MmCifCategoryBuilder.IhmEprRestraintBuilder, MmCifCategoryBuilder.IhmExternalFilesBuilder, MmCifCategoryBuilder.IhmExternalReferenceInfoBuilder, MmCifCategoryBuilder.IhmFeatureListBuilder, MmCifCategoryBuilder.IhmGaussianObjEnsembleBuilder, MmCifCategoryBuilder.IhmGaussianObjSiteBuilder, MmCifCategoryBuilder.IhmGeometricObjectAxisBuilder, MmCifCategoryBuilder.IhmGeometricObjectCenterBuilder, MmCifCategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder, MmCifCategoryBuilder.IhmGeometricObjectHalfTorusBuilder, MmCifCategoryBuilder.IhmGeometricObjectListBuilder, MmCifCategoryBuilder.IhmGeometricObjectPlaneBuilder, MmCifCategoryBuilder.IhmGeometricObjectSphereBuilder, MmCifCategoryBuilder.IhmGeometricObjectTorusBuilder, MmCifCategoryBuilder.IhmGeometricObjectTransformationBuilder, MmCifCategoryBuilder.IhmHdxRestraintBuilder, MmCifCategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder, MmCifCategoryBuilder.IhmInterfaceResidueFeatureBuilder, MmCifCategoryBuilder.IhmLigandProbeBuilder, MmCifCategoryBuilder.IhmLocalizationDensityFilesBuilder, MmCifCategoryBuilder.IhmModelGroupBuilder, MmCifCategoryBuilder.IhmModelGroupLinkBuilder, MmCifCategoryBuilder.IhmModelingPostProcessBuilder, MmCifCategoryBuilder.IhmModelingProtocolBuilder, MmCifCategoryBuilder.IhmModelingProtocolDetailsBuilder, MmCifCategoryBuilder.IhmModelListBuilder, MmCifCategoryBuilder.IhmModelRepresentationBuilder, MmCifCategoryBuilder.IhmModelRepresentationDetailsBuilder, MmCifCategoryBuilder.IhmModelRepresentativeBuilder, MmCifCategoryBuilder.IhmMultiStateModelGroupLinkBuilder, MmCifCategoryBuilder.IhmMultiStateModelingBuilder, MmCifCategoryBuilder.IhmNonPolyFeatureBuilder, MmCifCategoryBuilder.IhmOrderedEnsembleBuilder, MmCifCategoryBuilder.IhmPolyAtomFeatureBuilder, MmCifCategoryBuilder.IhmPolyProbeConjugateBuilder, MmCifCategoryBuilder.IhmPolyProbePositionBuilder, MmCifCategoryBuilder.IhmPolyResidueFeatureBuilder, MmCifCategoryBuilder.IhmPredictedContactRestraintBuilder, MmCifCategoryBuilder.IhmProbeListBuilder, MmCifCategoryBuilder.IhmPseudoSiteBuilder, MmCifCategoryBuilder.IhmPseudoSiteFeatureBuilder, MmCifCategoryBuilder.IhmRelatedDatasetsBuilder, MmCifCategoryBuilder.IhmResiduesNotModeledBuilder, MmCifCategoryBuilder.IhmSasRestraintBuilder, MmCifCategoryBuilder.IhmSphereObjSiteBuilder, MmCifCategoryBuilder.IhmStartingComparativeModelsBuilder, MmCifCategoryBuilder.IhmStartingComputationalModelsBuilder, MmCifCategoryBuilder.IhmStartingModelCoordBuilder, MmCifCategoryBuilder.IhmStartingModelDetailsBuilder, MmCifCategoryBuilder.IhmStartingModelSeqDifBuilder, MmCifCategoryBuilder.IhmStructAssemblyBuilder, MmCifCategoryBuilder.IhmStructAssemblyClassBuilder, MmCifCategoryBuilder.IhmStructAssemblyClassLinkBuilder, MmCifCategoryBuilder.IhmStructAssemblyDetailsBuilder, MmCifCategoryBuilder.JournalBuilder, MmCifCategoryBuilder.JournalIndexBuilder, MmCifCategoryBuilder.NdbOriginalNdbCoordinatesBuilder, MmCifCategoryBuilder.NdbStructConfNaBuilder, MmCifCategoryBuilder.NdbStructFeatureNaBuilder, MmCifCategoryBuilder.NdbStructNaBasePairBuilder, MmCifCategoryBuilder.NdbStructNaBasePairStepBuilder, MmCifCategoryBuilder.PdbxAtlasBuilder, MmCifCategoryBuilder.PdbxAtomSiteAnisoTlsBuilder, MmCifCategoryBuilder.PdbxAuditAuthorBuilder, MmCifCategoryBuilder.PdbxAuditBuilder, MmCifCategoryBuilder.PdbxAuditConformExtensionBuilder, MmCifCategoryBuilder.PdbxAuditRevisionCategoryBuilder, MmCifCategoryBuilder.PdbxAuditRevisionDetailsBuilder, MmCifCategoryBuilder.PdbxAuditRevisionGroupBuilder, MmCifCategoryBuilder.PdbxAuditRevisionHistoryBuilder, MmCifCategoryBuilder.PdbxAuditRevisionItemBuilder, MmCifCategoryBuilder.PdbxAuditSupportBuilder, MmCifCategoryBuilder.PdbxBondDistanceLimitsBuilder, MmCifCategoryBuilder.PdbxBranchSchemeBuilder, MmCifCategoryBuilder.PdbxBufferBuilder, MmCifCategoryBuilder.PdbxBufferComponentsBuilder, MmCifCategoryBuilder.PdbxChemCompAtomEditBuilder, MmCifCategoryBuilder.PdbxChemCompAtomFeatureBuilder, MmCifCategoryBuilder.PdbxChemCompAtomRelatedBuilder, MmCifCategoryBuilder.PdbxChemCompAuditBuilder, MmCifCategoryBuilder.PdbxChemCompBondEditBuilder, MmCifCategoryBuilder.PdbxChemCompDepositorInfoBuilder, MmCifCategoryBuilder.PdbxChemCompDescriptorBuilder, MmCifCategoryBuilder.PdbxChemCompFeatureBuilder, MmCifCategoryBuilder.PdbxChemCompIdentifierBuilder, MmCifCategoryBuilder.PdbxChemCompImportBuilder, MmCifCategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder, MmCifCategoryBuilder.PdbxChemCompModelAtomBuilder, MmCifCategoryBuilder.PdbxChemCompModelAuditBuilder, MmCifCategoryBuilder.PdbxChemCompModelBondBuilder, MmCifCategoryBuilder.PdbxChemCompModelBuilder, MmCifCategoryBuilder.PdbxChemCompModelDescriptorBuilder, MmCifCategoryBuilder.PdbxChemCompModelFeatureBuilder, MmCifCategoryBuilder.PdbxChemCompModelReferenceBuilder, MmCifCategoryBuilder.PdbxChemCompNonstandardBuilder, MmCifCategoryBuilder.PdbxChemCompRelatedBuilder, MmCifCategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder, MmCifCategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder, MmCifCategoryBuilder.PdbxChemCompSynonymsBuilder, MmCifCategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder, MmCifCategoryBuilder.PdbxColumninfoBuilder, MmCifCategoryBuilder.PdbxConnectAtomBuilder, MmCifCategoryBuilder.PdbxConnectBuilder, MmCifCategoryBuilder.PdbxConnectModificationBuilder, MmCifCategoryBuilder.PdbxConnectTypeBuilder, MmCifCategoryBuilder.PdbxConstructBuilder, MmCifCategoryBuilder.PdbxConstructFeatureBuilder, MmCifCategoryBuilder.PdbxContactAuthorBuilder, MmCifCategoryBuilder.PdbxCoordBuilder, MmCifCategoryBuilder.PdbxCoordinateModelBuilder, MmCifCategoryBuilder.PdbxCrystalAlignmentBuilder, MmCifCategoryBuilder.PdbxDatabaseMessageBuilder, MmCifCategoryBuilder.PdbxDatabasePDBMasterBuilder, MmCifCategoryBuilder.PdbxDatabasePDBObsSprBuilder, MmCifCategoryBuilder.PdbxDatabasePdbOmitBuilder, MmCifCategoryBuilder.PdbxDatabaseProcBuilder, MmCifCategoryBuilder.PdbxDatabaseRelatedBuilder, MmCifCategoryBuilder.PdbxDatabaseRemarkBuilder, MmCifCategoryBuilder.PdbxDatabaseStatusBuilder, MmCifCategoryBuilder.PdbxDatabaseStatusHistoryBuilder, MmCifCategoryBuilder.PdbxDataProcessingCellBuilder, MmCifCategoryBuilder.PdbxDataProcessingDetectorBuilder, MmCifCategoryBuilder.PdbxDataProcessingReflnsBuilder, MmCifCategoryBuilder.PdbxDataProcessingStatusBuilder, MmCifCategoryBuilder.PdbxDbrefBuilder, MmCifCategoryBuilder.PdbxDccDensityBuilder, MmCifCategoryBuilder.PdbxDccDensityCorrBuilder, MmCifCategoryBuilder.PdbxDccGeometryBuilder, MmCifCategoryBuilder.PdbxDccMapBuilder, MmCifCategoryBuilder.PdbxDccMapmanBuilder, MmCifCategoryBuilder.PdbxDccRsccMapmanBuilder, MmCifCategoryBuilder.PdbxDccRsccMapmanOverallBuilder, MmCifCategoryBuilder.PdbxDepositGroupBuilder, MmCifCategoryBuilder.PdbxDepositGroupIndexBuilder, MmCifCategoryBuilder.PdbxDepositionMessageFileReferenceBuilder, MmCifCategoryBuilder.PdbxDepositionMessageInfoBuilder, MmCifCategoryBuilder.PdbxDepuiEntityFeaturesBuilder, MmCifCategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder, MmCifCategoryBuilder.PdbxDepuiEntryDetailsBuilder, MmCifCategoryBuilder.PdbxDepuiStatusFlagsBuilder, MmCifCategoryBuilder.PdbxDepuiUploadBuilder, MmCifCategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder, MmCifCategoryBuilder.PdbxDiffrnReflnsShellBuilder, MmCifCategoryBuilder.PdbxDistantSolventAtomsBuilder, MmCifCategoryBuilder.PdbxDomainBuilder, MmCifCategoryBuilder.PdbxDomainRangeBuilder, MmCifCategoryBuilder.PdbxDrugInfoBuilder, MmCifCategoryBuilder.PdbxEntityAssemblyBuilder, MmCifCategoryBuilder.PdbxEntityBranchBuilder, MmCifCategoryBuilder.PdbxEntityBranchDescriptorBuilder, MmCifCategoryBuilder.PdbxEntityBranchLinkBuilder, MmCifCategoryBuilder.PdbxEntityBranchListBuilder, MmCifCategoryBuilder.PdbxEntityFuncBindModeBuilder, MmCifCategoryBuilder.PdbxEntityFuncEnzymeBuilder, MmCifCategoryBuilder.PdbxEntityFuncOtherBuilder, MmCifCategoryBuilder.PdbxEntityFuncRegulatoryBuilder, MmCifCategoryBuilder.PdbxEntityFuncStructuralBuilder, MmCifCategoryBuilder.PdbxEntityInstanceFeatureBuilder, MmCifCategoryBuilder.PdbxEntityNameBuilder, MmCifCategoryBuilder.PdbxEntityNameInstanceBuilder, MmCifCategoryBuilder.PdbxEntityNameTaxonomyBuilder, MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder, MmCifCategoryBuilder.PdbxEntityNonpolyBuilder, MmCifCategoryBuilder.PdbxEntityPolyCompLinkListBuilder, MmCifCategoryBuilder.PdbxEntityPolyDomainBuilder, MmCifCategoryBuilder.PdbxEntityPolyNaNonstandardBuilder, MmCifCategoryBuilder.PdbxEntityPolyNaTypeBuilder, MmCifCategoryBuilder.PdbxEntityPolyProteinClassBuilder, MmCifCategoryBuilder.PdbxEntityProdProtocolBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenCharacterBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenChromBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenCloneBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenExpressBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenFractBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenLysisBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenProdDigestBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenProdPcrBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenProteolysisBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenPureBuilder, MmCifCategoryBuilder.PdbxEntitySrcGenRefoldBuilder, MmCifCategoryBuilder.PdbxEntitySrcSynBuilder, MmCifCategoryBuilder.PdbxEntryDetailsBuilder, MmCifCategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder, MmCifCategoryBuilder.PdbxExptlCrystalGrowCompBuilder, MmCifCategoryBuilder.PdbxExptlCrystalGrowSolBuilder, MmCifCategoryBuilder.PdbxExptlPdBuilder, MmCifCategoryBuilder.PdbxFamilyGroupIndexBuilder, MmCifCategoryBuilder.PdbxFamilyPrdAuditBuilder, MmCifCategoryBuilder.PdbxFeatureAssemblyBuilder, MmCifCategoryBuilder.PdbxFeatureDomainBuilder, MmCifCategoryBuilder.PdbxFeatureEntryBuilder, MmCifCategoryBuilder.PdbxFeatureMonomerBuilder, MmCifCategoryBuilder.PdbxFeatureSequenceRangeBuilder, MmCifCategoryBuilder.PdbxHelicalSymmetryBuilder, MmCifCategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder, MmCifCategoryBuilder.PdbxHybridBuilder, MmCifCategoryBuilder.PdbxInhibitorInfoBuilder, MmCifCategoryBuilder.PdbxIonInfoBuilder, MmCifCategoryBuilder.PdbxLinkedEntityBuilder, MmCifCategoryBuilder.PdbxLinkedEntityInstanceListBuilder, MmCifCategoryBuilder.PdbxLinkedEntityLinkListBuilder, MmCifCategoryBuilder.PdbxLinkedEntityListBuilder, MmCifCategoryBuilder.PdbxMissingAtomNonpolyBuilder, MmCifCategoryBuilder.PdbxMissingAtomPolyBuilder, MmCifCategoryBuilder.PdbxMissingResidueListBuilder, MmCifCategoryBuilder.PdbxMoleculeBuilder, MmCifCategoryBuilder.PdbxMoleculeFeaturesBuilder, MmCifCategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder, MmCifCategoryBuilder.PdbxNaStrandInfoBuilder, MmCifCategoryBuilder.PdbxNaStructKeywdsBuilder, MmCifCategoryBuilder.PdbxNmrAssignedChemShiftListBuilder, MmCifCategoryBuilder.PdbxNmrChemShiftExperimentBuilder, MmCifCategoryBuilder.PdbxNmrChemShiftRefBuilder, MmCifCategoryBuilder.PdbxNmrChemShiftReferenceBuilder, MmCifCategoryBuilder.PdbxNmrChemShiftSoftwareBuilder, MmCifCategoryBuilder.PdbxNmrComputingBuilder, MmCifCategoryBuilder.PdbxNmrConstraintFileBuilder, MmCifCategoryBuilder.PdbxNmrConstraintsBuilder, MmCifCategoryBuilder.PdbxNmrDetailsBuilder, MmCifCategoryBuilder.PdbxNmrEnsembleBuilder, MmCifCategoryBuilder.PdbxNmrEnsembleRmsBuilder, MmCifCategoryBuilder.PdbxNmrExptlBuilder, MmCifCategoryBuilder.PdbxNmrExptlSampleBuilder, MmCifCategoryBuilder.PdbxNmrExptlSampleConditionsBuilder, MmCifCategoryBuilder.PdbxNmrForceConstantsBuilder, MmCifCategoryBuilder.PdbxNmrRefineBuilder, MmCifCategoryBuilder.PdbxNmrRepresentativeBuilder, MmCifCategoryBuilder.PdbxNmrSampleDetailsBuilder, MmCifCategoryBuilder.PdbxNmrSoftwareBuilder, MmCifCategoryBuilder.PdbxNmrSoftwareTaskBuilder, MmCifCategoryBuilder.PdbxNmrSpectralDimBuilder, MmCifCategoryBuilder.PdbxNmrSpectralPeakListBuilder, MmCifCategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder, MmCifCategoryBuilder.PdbxNmrSpectrometerBuilder, MmCifCategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder, MmCifCategoryBuilder.PdbxNmrUploadBuilder, MmCifCategoryBuilder.PdbxNonpolySchemeBuilder, MmCifCategoryBuilder.PdbxNonstandardListBuilder, MmCifCategoryBuilder.PdbxPdbCompndBuilder, MmCifCategoryBuilder.PdbxPdbSourceBuilder, MmCifCategoryBuilder.PdbxPhasingDmBuilder, MmCifCategoryBuilder.PdbxPhasingDmShellBuilder, MmCifCategoryBuilder.PdbxPhasingMADSetBuilder, MmCifCategoryBuilder.PdbxPhasingMADSetShellBuilder, MmCifCategoryBuilder.PdbxPhasingMADSetSiteBuilder, MmCifCategoryBuilder.PdbxPhasingMADShellBuilder, MmCifCategoryBuilder.PdbxPhasingMRBuilder, MmCifCategoryBuilder.PdbxPointSymmetryBuilder, MmCifCategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder, MmCifCategoryBuilder.PdbxPolySeqSchemeBuilder, MmCifCategoryBuilder.PdbxPostProcessDetailsBuilder, MmCifCategoryBuilder.PdbxPostProcessStatusBuilder, MmCifCategoryBuilder.PdbxPrdAuditBuilder, MmCifCategoryBuilder.PdbxPrereleaseSeqBuilder, MmCifCategoryBuilder.PdbxProteinInfoBuilder, MmCifCategoryBuilder.PdbxReferenceEntityLinkBuilder, MmCifCategoryBuilder.PdbxReferenceEntityListBuilder, MmCifCategoryBuilder.PdbxReferenceEntityNonpolyBuilder, MmCifCategoryBuilder.PdbxReferenceEntityPolyBuilder, MmCifCategoryBuilder.PdbxReferenceEntityPolyLinkBuilder, MmCifCategoryBuilder.PdbxReferenceEntityPolySeqBuilder, MmCifCategoryBuilder.PdbxReferenceEntitySequenceBuilder, MmCifCategoryBuilder.PdbxReferenceEntitySrcNatBuilder, MmCifCategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder, MmCifCategoryBuilder.PdbxReferenceLinkedEntityBuilder, MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder, MmCifCategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder, MmCifCategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeDetailsBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeFamilyBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeListBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder, MmCifCategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder, MmCifCategoryBuilder.PdbxReferencePublicationListBuilder, MmCifCategoryBuilder.PdbxRefineAuxFileBuilder, MmCifCategoryBuilder.PdbxRefineBuilder, MmCifCategoryBuilder.PdbxRefineComponentBuilder, MmCifCategoryBuilder.PdbxRefineLsRestrNcsBuilder, MmCifCategoryBuilder.PdbxRefineTlsBuilder, MmCifCategoryBuilder.PdbxRefineTlsGroupBuilder, MmCifCategoryBuilder.PdbxReflnsTwinBuilder, MmCifCategoryBuilder.PdbxRelatedExpDataSetBuilder, MmCifCategoryBuilder.PdbxRemediationAtomSiteMappingBuilder, MmCifCategoryBuilder.PdbxReRefinementBuilder, MmCifCategoryBuilder.PdbxRmchOutlierBuilder, MmCifCategoryBuilder.PdbxRmsDevsCovalentBuilder, MmCifCategoryBuilder.PdbxRmsDevsCovByMonomerBuilder, MmCifCategoryBuilder.PdbxRobotSystemBuilder, MmCifCategoryBuilder.PdbxSeqMapDepositorInfoBuilder, MmCifCategoryBuilder.PdbxSequenceAnnotationBuilder, MmCifCategoryBuilder.PdbxSequencePatternBuilder, MmCifCategoryBuilder.PdbxSequenceRangeBuilder, MmCifCategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder, MmCifCategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder, MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder, MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder, MmCifCategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder, MmCifCategoryBuilder.PdbxSGProjectBuilder, MmCifCategoryBuilder.PdbxSolnScatterBuilder, MmCifCategoryBuilder.PdbxSolnScatterModelBuilder, MmCifCategoryBuilder.PdbxSolventAtomSiteMappingBuilder, MmCifCategoryBuilder.PdbxSolventInfoBuilder, MmCifCategoryBuilder.PdbxSourceBuilder, MmCifCategoryBuilder.PdbxStereochemistryBuilder, MmCifCategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder, MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder, MmCifCategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructAssemblyBuilder, MmCifCategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructAssemblyGenBuilder, MmCifCategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructAssemblyPropBuilder, MmCifCategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructAsymGenBuilder, MmCifCategoryBuilder.PdbxStructBiolFuncBuilder, MmCifCategoryBuilder.PdbxStructChemCompDiagnosticsBuilder, MmCifCategoryBuilder.PdbxStructChemCompFeatureBuilder, MmCifCategoryBuilder.PdbxStructConnAngleBuilder, MmCifCategoryBuilder.PdbxStructEntityInstBuilder, MmCifCategoryBuilder.PdbxStructGroupComponentRangeBuilder, MmCifCategoryBuilder.PdbxStructGroupComponentsBuilder, MmCifCategoryBuilder.PdbxStructGroupListBuilder, MmCifCategoryBuilder.PdbxStructInfoBuilder, MmCifCategoryBuilder.PdbxStructLegacyOperListBuilder, MmCifCategoryBuilder.PdbxStructLinkBuilder, MmCifCategoryBuilder.PdbxStructModResidueBuilder, MmCifCategoryBuilder.PdbxStructMsymGenBuilder, MmCifCategoryBuilder.PdbxStructNcsVirusGenBuilder, MmCifCategoryBuilder.PdbxStructOperListBuilder, MmCifCategoryBuilder.PdbxStructOperListDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructPackGenBuilder, MmCifCategoryBuilder.PdbxStructRefSeqDeletionBuilder, MmCifCategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder, MmCifCategoryBuilder.PdbxStructRefSeqFeatureBuilder, MmCifCategoryBuilder.PdbxStructRefSeqFeaturePropBuilder, MmCifCategoryBuilder.PdbxStructRefSeqInsertionBuilder, MmCifCategoryBuilder.PdbxStructSheetHbondBuilder, MmCifCategoryBuilder.PdbxStructSpecialSymmetryBuilder, MmCifCategoryBuilder.PdbxSugarPhosphateGeometryBuilder, MmCifCategoryBuilder.PdbxSummaryFlagsBuilder, MmCifCategoryBuilder.PdbxSupportingExpDataSetBuilder, MmCifCategoryBuilder.PdbxTableinfoBuilder, MmCifCategoryBuilder.PdbxTrnaInfoBuilder, MmCifCategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder, MmCifCategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder, MmCifCategoryBuilder.PdbxUnpairBuilder, MmCifCategoryBuilder.PdbxValAngleBuilder, MmCifCategoryBuilder.PdbxValBondBuilder, MmCifCategoryBuilder.PdbxValChiralBuilder, MmCifCategoryBuilder.PdbxValContactBuilder, MmCifCategoryBuilder.PdbxValidateChiralBuilder, MmCifCategoryBuilder.PdbxValidateCloseContactBuilder, MmCifCategoryBuilder.PdbxValidateMainChainPlaneBuilder, MmCifCategoryBuilder.PdbxValidatePeptideOmegaBuilder, MmCifCategoryBuilder.PdbxValidatePlanesAtomBuilder, MmCifCategoryBuilder.PdbxValidatePlanesBuilder, MmCifCategoryBuilder.PdbxValidatePolymerLinkageBuilder, MmCifCategoryBuilder.PdbxValidateRmsdAngleBuilder, MmCifCategoryBuilder.PdbxValidateRmsdBondBuilder, MmCifCategoryBuilder.PdbxValidateSymmContactBuilder, MmCifCategoryBuilder.PdbxValidateTorsionBuilder, MmCifCategoryBuilder.PdbxValSymContactBuilder, MmCifCategoryBuilder.PdbxVersionBuilder, MmCifCategoryBuilder.PdbxViewCategoryBuilder, MmCifCategoryBuilder.PdbxViewCategoryGroupBuilder, MmCifCategoryBuilder.PdbxViewItemBuilder, MmCifCategoryBuilder.PdbxVirtualAngleBuilder, MmCifCategoryBuilder.PdbxVirtualBondBuilder, MmCifCategoryBuilder.PdbxVirtualTorsionBuilder, MmCifCategoryBuilder.PdbxXplorFileBuilder, MmCifCategoryBuilder.PhasingAveragingBuilder, MmCifCategoryBuilder.PhasingBuilder, MmCifCategoryBuilder.PhasingIsomorphousBuilder, MmCifCategoryBuilder.PhasingMADBuilder, MmCifCategoryBuilder.PhasingMADClustBuilder, MmCifCategoryBuilder.PhasingMADExptBuilder, MmCifCategoryBuilder.PhasingMADRatioBuilder, MmCifCategoryBuilder.PhasingMADSetBuilder, MmCifCategoryBuilder.PhasingMIRBuilder, MmCifCategoryBuilder.PhasingMIRDerBuilder, MmCifCategoryBuilder.PhasingMIRDerReflnBuilder, MmCifCategoryBuilder.PhasingMIRDerShellBuilder, MmCifCategoryBuilder.PhasingMIRDerSiteBuilder, MmCifCategoryBuilder.PhasingMIRShellBuilder, MmCifCategoryBuilder.PhasingSetBuilder, MmCifCategoryBuilder.PhasingSetReflnBuilder, MmCifCategoryBuilder.PublAuthorBuilder, MmCifCategoryBuilder.PublBodyBuilder, MmCifCategoryBuilder.PublBuilder, MmCifCategoryBuilder.PublManuscriptInclBuilder, MmCifCategoryBuilder.RefineAnalyzeBuilder, MmCifCategoryBuilder.RefineBIsoBuilder, MmCifCategoryBuilder.RefineBuilder, MmCifCategoryBuilder.RefineFunctMinimizedBuilder, MmCifCategoryBuilder.RefineHistBuilder, MmCifCategoryBuilder.RefineLsClassBuilder, MmCifCategoryBuilder.RefineLsRestrBuilder, MmCifCategoryBuilder.RefineLsRestrNcsBuilder, MmCifCategoryBuilder.RefineLsRestrTypeBuilder, MmCifCategoryBuilder.RefineLsShellBuilder, MmCifCategoryBuilder.RefineOccupancyBuilder, MmCifCategoryBuilder.ReflnBuilder, MmCifCategoryBuilder.ReflnsBuilder, MmCifCategoryBuilder.ReflnsClassBuilder, MmCifCategoryBuilder.ReflnsScaleBuilder, MmCifCategoryBuilder.ReflnsShellBuilder, MmCifCategoryBuilder.ReflnSysAbsBuilder, MmCifCategoryBuilder.SoftwareBuilder, MmCifCategoryBuilder.SpaceGroupBuilder, MmCifCategoryBuilder.SpaceGroupSymopBuilder, MmCifCategoryBuilder.StructAsymBuilder, MmCifCategoryBuilder.StructBiolBuilder, MmCifCategoryBuilder.StructBiolGenBuilder, MmCifCategoryBuilder.StructBiolKeywordsBuilder, MmCifCategoryBuilder.StructBiolViewBuilder, MmCifCategoryBuilder.StructBuilder, MmCifCategoryBuilder.StructConfBuilder, MmCifCategoryBuilder.StructConfTypeBuilder, MmCifCategoryBuilder.StructConnBuilder, MmCifCategoryBuilder.StructConnTypeBuilder, MmCifCategoryBuilder.StructKeywordsBuilder, MmCifCategoryBuilder.StructMonDetailsBuilder, MmCifCategoryBuilder.StructMonNuclBuilder, MmCifCategoryBuilder.StructMonProtBuilder, MmCifCategoryBuilder.StructMonProtCisBuilder, MmCifCategoryBuilder.StructNcsDomBuilder, MmCifCategoryBuilder.StructNcsDomLimBuilder, MmCifCategoryBuilder.StructNcsEnsBuilder, MmCifCategoryBuilder.StructNcsEnsGenBuilder, MmCifCategoryBuilder.StructNcsOperBuilder, MmCifCategoryBuilder.StructRefBuilder, MmCifCategoryBuilder.StructRefSeqBuilder, MmCifCategoryBuilder.StructRefSeqDifBuilder, MmCifCategoryBuilder.StructSheetBuilder, MmCifCategoryBuilder.StructSheetHbondBuilder, MmCifCategoryBuilder.StructSheetOrderBuilder, MmCifCategoryBuilder.StructSheetRangeBuilder, MmCifCategoryBuilder.StructSheetTopologyBuilder, MmCifCategoryBuilder.StructSiteBuilder, MmCifCategoryBuilder.StructSiteGenBuilder, MmCifCategoryBuilder.StructSiteKeywordsBuilder, MmCifCategoryBuilder.StructSiteViewBuilder, MmCifCategoryBuilder.SymmetryBuilder, MmCifCategoryBuilder.SymmetryEquivBuilder, MmCifCategoryBuilder.ValenceParamBuilder, MmCifCategoryBuilder.ValenceRefBuilder

Field Summary

Fields inherited from class org.rcsb.cif.model.builder.CategoryBuilderImpl

parent

Constructor Summary

Constructors

Constructor	Description
PdbxEntityNameTaxonomyTreeBuilder(MmCifBlockBuilder parent)

Method Summary

Modifier and Type	Method	Description
StrColumnBuilder<MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder,MmCifBlockBuilder,MmCifFileBuilder>	enterId()
StrColumnBuilder<MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder,MmCifBlockBuilder,MmCifFileBuilder>	enterParentId()

Methods inherited from class org.rcsb.cif.model.builder.CategoryBuilderImpl

addColumn, build, digest, digest, digest, enterFloatColumn, enterIntColumn, enterStrColumn, getCategoryName, getColumns, leaveCategory, registerChild

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PdbxEntityNameTaxonomyTreeBuilder

public PdbxEntityNameTaxonomyTreeBuilder(MmCifBlockBuilder parent)

Method Details

enterId

public StrColumnBuilder<MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder,MmCifBlockBuilder,MmCifFileBuilder> enterId()

enterParentId

public StrColumnBuilder<MmCifCategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder,MmCifBlockBuilder,MmCifFileBuilder> enterParentId()