Package org.rcsb.cif.schema.mm

Class PdbxChemCompDepositorInfo

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxChemCompDepositorInfo
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxChemCompDepositorInfo
extends DelegatingCategory
Data items in the PDBX_CHEM_COMP_DEPOSITOR_INFO category record additional details provided by depositors about deposited chemical components.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getOrdinal

      public IntColumn getOrdinal()
      Ordinal index for this category.
      Returns:
      IntColumn

    • getCompId

      public StrColumn getCompId()
      The chemical component identifier used by the depositor to represent this component.
      Returns:
      StrColumn

    • getAltCompId

      public StrColumn getAltCompId()
      The alternate chemical component identifier matching the deposited chemical component.
      Returns:
      StrColumn

    • getName

      public StrColumn getName()
      The chemical name of the component.
      Returns:
      StrColumn

    • getFormula

      public StrColumn getFormula()
      The formula for the chemical component. Formulae are written according to the following rules: (1) Only recognized element symbols may be used. (2) Each element symbol is followed by a 'count' number. A count of '1' may be omitted. (3) A space or parenthesis must separate each cluster of (element symbol + count), but in general parentheses are not used. (4) The order of elements depends on whether carbon is present or not. If carbon is present, the order should be: C, then H, then the other elements in alphabetical order of their symbol. If carbon is not present, the elements are listed purely in alphabetic order of their symbol. This is the 'Hill' system used by Chemical Abstracts.
      Returns:
      StrColumn

    • getType

      public StrColumn getType()
      This data item contains the chemical component type.
      Returns:
      StrColumn

    • getDescriptor

      public StrColumn getDescriptor()
      This data item contains the descriptor value for this component.
      Returns:
      StrColumn

    • getDescriptorType

      public StrColumn getDescriptorType()
      This data item contains the descriptor type.
      Returns:
      StrColumn

    • getInDictionaryFlag

      public StrColumn getInDictionaryFlag()
      A flag to indicate if the chemical component is defined in the chemical component dictionary.
      Returns:
      StrColumn

    • getDetails

      public StrColumn getDetails()
      This data item contains additional details about this component.
      Returns:
      StrColumn