Package org.rcsb.cif.schema.mm
Class PdbxConnectAtom
java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxConnectAtom
- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxConnectAtom
extends DelegatingCategory
Local data items describing ligand and monomer
atom names and connectivity.
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Nested Class Summary
Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory
DelegatingCategory.DelegatingCifCoreCategoryNested classes/interfaces inherited from interface org.rcsb.cif.model.Category
Category.EmptyCategory -
Field Summary
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Constructor Summary
Constructors Constructor Description PdbxConnectAtom(Category delegate) -
Method Summary
Modifier and Type Method Description protected ColumncreateDelegate(String columnName, Column column)IntColumngetAlignPos()Starting column of atom name in PDB atom field.StrColumngetAtomName()Uniquely identifies the atom within the component.StrColumngetBondType()Bond type.IntColumngetCharge()ChargeStrColumngetConnectTo()Identifies a connected atom within the component.StrColumngetResName()Unique (typically 3-letter code) identifier for chemical group.StrColumngetTypeSymbol()Element symbolMethods inherited from class org.rcsb.cif.schema.DelegatingCategory
getCategoryName, getColumn, getColumns, getRowCount
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Constructor Details
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Method Details
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createDelegate
- Overrides:
createDelegatein classDelegatingCategory
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getResName
Unique (typically 3-letter code) identifier for chemical group.- Returns:
- StrColumn
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getAtomName
Uniquely identifies the atom within the component.- Returns:
- StrColumn
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getConnectTo
Identifies a connected atom within the component.- Returns:
- StrColumn
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getTypeSymbol
Element symbol- Returns:
- StrColumn
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getCharge
Charge- Returns:
- IntColumn
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getBondType
Bond type.- Returns:
- StrColumn
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getAlignPos
Starting column of atom name in PDB atom field.- Returns:
- IntColumn
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