Package org.rcsb.cif.schema.mm

Class PdbxDccDensityCorr

java.lang.Object

org.rcsb.cif.schema.DelegatingCategory

org.rcsb.cif.schema.mm.PdbxDccDensityCorr

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxDccDensityCorr
extends DelegatingCategory

Data items in the category record calculated metrics from various programs (such as phenix, refmac, cns, sfcheck).

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory

Nested classes/interfaces inherited from interface org.rcsb.cif.model.Category

Category.EmptyCategory

Field Summary

Fields inherited from class org.rcsb.cif.schema.DelegatingCategory

delegate

Constructor Summary

Constructors

Constructor	Description
PdbxDccDensityCorr(Category delegate)

Method Summary

Modifier and Type	Method	Description
protected Column	createDelegate(String columnName, Column column)
FloatColumn	getCorrelation()	The overall real space density correlation coefficient.
FloatColumn	getCorrelationCoeffFoToFc()	The correlations between the observed and calculated structure factors.
StrColumn	getDetails()	Any additional details of the calculations.
FloatColumn	getLsDResHigh()	The highest resolution limit in calculating the metrics in this category.
FloatColumn	getLsDResLow()	The lowest resolution limit in calculating the metrics in this category.
IntColumn	getLsNumberReflnsObs()	The number of unique reflections (work+test sets).
IntColumn	getLsNumberReflnsRFree()	The number of reflections for the test set only.
FloatColumn	getLsPercentReflnsObs()	The percentage of unique reflections (work+test sets).
FloatColumn	getLsRFactorRAll()	The calculated Rfactor using all the data.
FloatColumn	getLsRFactorRFree()	The calculated Rfree using the test set data.
FloatColumn	getLsRFactorRWork()	The calculated Rfactor using the working set data.
IntColumn	getOrdinal()	The ordered number in the output list.
StrColumn	getProgram()	The program used to calculate the metrics in this category.
FloatColumn	getRealSpaceR()	The overall real space R factor.

Methods inherited from class org.rcsb.cif.schema.DelegatingCategory

getCategoryName, getColumn, getColumns, getRowCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columns, getColumn, isDefined

Constructor Details

PdbxDccDensityCorr

public PdbxDccDensityCorr(Category delegate)

Method Details

createDelegate

protected Column createDelegate(String columnName, Column column)

Overrides:

createDelegate in class DelegatingCategory

getOrdinal

public IntColumn getOrdinal()

The ordered number in the output list.

Returns:

IntColumn

getProgram

public StrColumn getProgram()

The program used to calculate the metrics in this category.

Returns:

StrColumn

getLsDResHigh

public FloatColumn getLsDResHigh()

The highest resolution limit in calculating the metrics in this category.

Returns:

FloatColumn

getLsDResLow

public FloatColumn getLsDResLow()

The lowest resolution limit in calculating the metrics in this category.

Returns:

FloatColumn

getLsRFactorRAll

public FloatColumn getLsRFactorRAll()

The calculated Rfactor using all the data.

Returns:

FloatColumn

getLsRFactorRWork

public FloatColumn getLsRFactorRWork()

The calculated Rfactor using the working set data.

Returns:

FloatColumn

getLsRFactorRFree

public FloatColumn getLsRFactorRFree()

The calculated Rfree using the test set data.

Returns:

FloatColumn

getLsNumberReflnsObs

public IntColumn getLsNumberReflnsObs()

The number of unique reflections (work+test sets).

Returns:

IntColumn

getLsPercentReflnsObs

public FloatColumn getLsPercentReflnsObs()

The percentage of unique reflections (work+test sets).

Returns:

FloatColumn

getLsNumberReflnsRFree

public IntColumn getLsNumberReflnsRFree()

The number of reflections for the test set only.

Returns:

IntColumn

getCorrelationCoeffFoToFc

public FloatColumn getCorrelationCoeffFoToFc()

The correlations between the observed and calculated structure factors.

Returns:

FloatColumn

getRealSpaceR

public FloatColumn getRealSpaceR()

The overall real space R factor.

Returns:

FloatColumn

getCorrelation

public FloatColumn getCorrelation()

The overall real space density correlation coefficient.

Returns:

FloatColumn

getDetails

public StrColumn getDetails()

Any additional details of the calculations.

Returns:

StrColumn