Package org.rcsb.cif.schema.mm

Class PdbxDccRsccMapman

java.lang.Object

org.rcsb.cif.schema.DelegatingCategory

org.rcsb.cif.schema.mm.PdbxDccRsccMapman

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxDccRsccMapman
extends DelegatingCategory

Data items in this category record residual map properties such as correlation, real space Rfactors and the Zscore calculated from refmac and mapman.

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory

Nested classes/interfaces inherited from interface org.rcsb.cif.model.Category

Category.EmptyCategory

Field Summary

Fields inherited from class org.rcsb.cif.schema.DelegatingCategory

delegate

Constructor Summary

Constructors

Constructor	Description
PdbxDccRsccMapman(Category delegate)

Method Summary

Modifier and Type	Method	Description
protected Column	createDelegate(String columnName, Column column)
StrColumn	getAuthAsymId()	The author provided chain id.
StrColumn	getAuthCompId()	The author provided compound ID (residue name).
StrColumn	getAuthSeqId()	The author provided residue number.
FloatColumn	getBisoMean()	The occupancy weighted average isotropic B factors for the residue.
FloatColumn	getCorrelation()	The real space electron density correlation coefficient (RSCC) for the residue.
StrColumn	getFlag()	Residue with density problem will be flagged as P.
IntColumn	getId()	The ordered number in the output list.
StrColumn	getLabelAltId()	The author provided alternate location identifier.
StrColumn	getLabelInsCode()	PDB insertion code.
StrColumn	getModelId()	The component model identifier for this analysis.
FloatColumn	getOccupancyMean()	The average occupancy for the residue.
StrColumn	getPdbId()	The PDB id code.
FloatColumn	getRealSpaceR()	The Real Space Rfactor (RSR) for the residue.
FloatColumn	getRealSpaceZscore()	The Zscore of the Real Space Rfactor (RSRZ) for the residue.
FloatColumn	getWeightedRealSpaceR()	The weighted Real Space Rfactor (RSR/RSCC) for the residue.

Methods inherited from class org.rcsb.cif.schema.DelegatingCategory

getCategoryName, getColumn, getColumns, getRowCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columns, getColumn, isDefined

Constructor Details

PdbxDccRsccMapman

public PdbxDccRsccMapman(Category delegate)

Method Details

createDelegate

protected Column createDelegate(String columnName, Column column)

Overrides:

createDelegate in class DelegatingCategory

getId

public IntColumn getId()

The ordered number in the output list.

Returns:

IntColumn

getModelId

public StrColumn getModelId()

The component model identifier for this analysis.

Returns:

StrColumn

getPdbId

public StrColumn getPdbId()

The PDB id code.

Returns:

StrColumn

getAuthAsymId

public StrColumn getAuthAsymId()

The author provided chain id.

Returns:

StrColumn

getAuthCompId

public StrColumn getAuthCompId()

The author provided compound ID (residue name).

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

The author provided residue number.

Returns:

StrColumn

getLabelAltId

public StrColumn getLabelAltId()

The author provided alternate location identifier.

Returns:

StrColumn

getLabelInsCode

public StrColumn getLabelInsCode()

PDB insertion code.

Returns:

StrColumn

getCorrelation

public FloatColumn getCorrelation()

The real space electron density correlation coefficient (RSCC) for the residue.

Returns:

FloatColumn

getRealSpaceR

public FloatColumn getRealSpaceR()

The Real Space Rfactor (RSR) for the residue.

Returns:

FloatColumn

getWeightedRealSpaceR

public FloatColumn getWeightedRealSpaceR()

The weighted Real Space Rfactor (RSR/RSCC) for the residue.

Returns:

FloatColumn

getRealSpaceZscore

public FloatColumn getRealSpaceZscore()

The Zscore of the Real Space Rfactor (RSRZ) for the residue.

Returns:

FloatColumn

getBisoMean

public FloatColumn getBisoMean()

The occupancy weighted average isotropic B factors for the residue.

Returns:

FloatColumn

getOccupancyMean

public FloatColumn getOccupancyMean()

The average occupancy for the residue.

Returns:

FloatColumn

getFlag

public StrColumn getFlag()

Residue with density problem will be flagged as P.

Returns:

StrColumn