Package org.rcsb.cif.schema.mm

Class PdbxDepuiStatusFlags

java.lang.Object

org.rcsb.cif.schema.DelegatingCategory

org.rcsb.cif.schema.mm.PdbxDepuiStatusFlags

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxDepuiStatusFlags
extends DelegatingCategory

Data items in the PDBX_DEPUI_STATUS_FLAGS category record status details used to maintain state within the wwPDB deposition system.

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory

DelegatingCategory.DelegatingCifCoreCategory

Nested classes/interfaces inherited from interface org.rcsb.cif.model.Category

Category.EmptyCategory

Field Summary

Fields inherited from class org.rcsb.cif.schema.DelegatingCategory

delegate

Constructor Summary

Constructors

Constructor	Description
PdbxDepuiStatusFlags(Category delegate)

Method Summary

Modifier and Type	Method	Description
protected Column	createDelegate(String columnName, Column column)
StrColumn	getCorrespondingAuthorStatus()	A flag to indicate status about corresponding author data.
StrColumn	getDepDatasetId()	The internal identifier assigned to each deposition.
StrColumn	getHasAcceptedTermsAndConditions()	A flag to indicate the acceptance of wwPDB deposition and annotation terms and conditions.
StrColumn	getHasCyclicSymmetry()	A flag to indicate that this entry has cyclic symmetry
StrColumn	getHasHelicalSymmetry()	A flag to indicate that this entry has helical symmetry
StrColumn	getHasNcsData()	A flag to indicate that the deposition includes NCS data.
StrColumn	getHasPointSymmetry()	A flag to indicate that this entry has point symmetry
StrColumn	getHasSasData()	A flag to indicate whether the author has related SAXS/SANS data.
StrColumn	getHasViewedValidationReport()	A flag to indicate the viewing the latest validation report.
StrColumn	getIsGrantFunded()	A flag to indicate that the deposition was grant funded.
StrColumn	getIsLigandProcessingComplete()	A flag to indicate that ligand processing is complete
StrColumn	getIsSasDeposited()	A flag to indicate whether related SAXS/SANS data is already deposited elsewhere
StrColumn	getMergedFail()	A flag to indicate that merging of new coordinates has failed.
StrColumn	getMergeOutputModelFileName()	For the last model merge operation, the name of the model file containing output from the merge operation.
StrColumn	getMergePriorModelFileName()	For the last model merge operation, the name of the model file containing prior data for the current deposition session.
StrColumn	getMergeReplaceModelFileName()	For the last model merge operation, the name of the model file containing user provided replacement coordinate and model data.
StrColumn	getPostRelReplacementReason()	Records reason for author initiated coordinate replacement
StrColumn	getPostRelReplacementReasonDetails()	Records additional details for author initiated coordinate replacement
StrColumn	getPredictionTarget()	A flag to indicate that this entry is a candidate prediction target.
StrColumn	getPrimaryCitationStatus()	A flag to indicate status about primary citation data.
StrColumn	getReferenceCitationStatus()	A flag to indicate status about reference citation data.
StrColumn	getSampleXyzSequenceAlignmentsValid()	A flag to indicate that all sample coordinate sequence alignments are valid.
StrColumn	getUseSasRefine()	A flag to indicate whether related SAXS/SANS data were used in refinement
StrColumn	getValidatedModelFileName()	The the last validation report operation, the name of the model file last validated.

Methods inherited from class org.rcsb.cif.schema.DelegatingCategory

getCategoryName, getColumn, getColumns, getRowCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columns, getColumn, isDefined

Constructor Details

PdbxDepuiStatusFlags

public PdbxDepuiStatusFlags(Category delegate)

Method Details

createDelegate

protected Column createDelegate(String columnName, Column column)

Overrides:

createDelegate in class DelegatingCategory

getDepDatasetId

public StrColumn getDepDatasetId()

The internal identifier assigned to each deposition.

Returns:

StrColumn

getPrimaryCitationStatus

public StrColumn getPrimaryCitationStatus()

A flag to indicate status about primary citation data.

Returns:

StrColumn

getCorrespondingAuthorStatus

public StrColumn getCorrespondingAuthorStatus()

A flag to indicate status about corresponding author data.

Returns:

StrColumn

getReferenceCitationStatus

public StrColumn getReferenceCitationStatus()

A flag to indicate status about reference citation data.

Returns:

StrColumn

getIsGrantFunded

public StrColumn getIsGrantFunded()

A flag to indicate that the deposition was grant funded.

Returns:

StrColumn

getHasNcsData

public StrColumn getHasNcsData()

A flag to indicate that the deposition includes NCS data.

Returns:

StrColumn

getPredictionTarget

public StrColumn getPredictionTarget()

A flag to indicate that this entry is a candidate prediction target.

Returns:

StrColumn

getHasHelicalSymmetry

public StrColumn getHasHelicalSymmetry()

A flag to indicate that this entry has helical symmetry

Returns:

StrColumn

getHasPointSymmetry

public StrColumn getHasPointSymmetry()

A flag to indicate that this entry has point symmetry

Returns:

StrColumn

getHasCyclicSymmetry

public StrColumn getHasCyclicSymmetry()

A flag to indicate that this entry has cyclic symmetry

Returns:

StrColumn

getHasAcceptedTermsAndConditions

public StrColumn getHasAcceptedTermsAndConditions()

A flag to indicate the acceptance of wwPDB deposition and annotation terms and conditions.

Returns:

StrColumn

getHasViewedValidationReport

public StrColumn getHasViewedValidationReport()

A flag to indicate the viewing the latest validation report.

Returns:

StrColumn

getValidatedModelFileName

public StrColumn getValidatedModelFileName()

The the last validation report operation, the name of the model file last validated.

Returns:

StrColumn

getMergePriorModelFileName

public StrColumn getMergePriorModelFileName()

For the last model merge operation, the name of the model file containing prior data for the current deposition session.

Returns:

StrColumn

getMergeReplaceModelFileName

public StrColumn getMergeReplaceModelFileName()

For the last model merge operation, the name of the model file containing user provided replacement coordinate and model data.

Returns:

StrColumn

getMergeOutputModelFileName

public StrColumn getMergeOutputModelFileName()

For the last model merge operation, the name of the model file containing output from the merge operation.

Returns:

StrColumn

getIsLigandProcessingComplete

public StrColumn getIsLigandProcessingComplete()

A flag to indicate that ligand processing is complete

Returns:

StrColumn

getSampleXyzSequenceAlignmentsValid

public StrColumn getSampleXyzSequenceAlignmentsValid()

A flag to indicate that all sample coordinate sequence alignments are valid.

Returns:

StrColumn

getHasSasData

public StrColumn getHasSasData()

A flag to indicate whether the author has related SAXS/SANS data.

Returns:

StrColumn

getIsSasDeposited

public StrColumn getIsSasDeposited()

A flag to indicate whether related SAXS/SANS data is already deposited elsewhere

Returns:

StrColumn

getUseSasRefine

public StrColumn getUseSasRefine()

A flag to indicate whether related SAXS/SANS data were used in refinement

Returns:

StrColumn

getMergedFail

public StrColumn getMergedFail()

A flag to indicate that merging of new coordinates has failed.

Returns:

StrColumn

getPostRelReplacementReason

public StrColumn getPostRelReplacementReason()

Records reason for author initiated coordinate replacement

Returns:

StrColumn

getPostRelReplacementReasonDetails

public StrColumn getPostRelReplacementReasonDetails()

Records additional details for author initiated coordinate replacement

Returns:

StrColumn