Package org.rcsb.cif.schema.mm

Class PdbxDistantSolventAtoms

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxDistantSolventAtoms
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxDistantSolventAtoms
extends DelegatingCategory
Data items in the PDBX_DISTANT_SOLVENT_ATOMS category list the solvent atoms remote from any macromolecule.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getId

      public IntColumn getId()
      The value of _pdbx_distant_solvent_atoms.id must uniquely identify each item in the PDBX_DISTANT_SOLVENT_ATOMS list. This is an integer serial number.
      Returns:
      IntColumn

    • getPDBModelNum

      public IntColumn getPDBModelNum()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.
      Returns:
      IntColumn

    • getAuthAsymId

      public StrColumn getAuthAsymId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAuthAtomId

      public StrColumn getAuthAtomId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAuthCompId

      public StrColumn getAuthCompId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAuthSeqId

      public StrColumn getAuthSeqId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getPDBInsCode

      public StrColumn getPDBInsCode()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
      Returns:
      StrColumn

    • getLabelAltId

      public StrColumn getLabelAltId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.label_alt.id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getLabelAtomId

      public StrColumn getLabelAtomId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getLabelAsymId

      public StrColumn getLabelAsymId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getLabelCompId

      public StrColumn getLabelCompId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getLabelSeqId

      public IntColumn getLabelSeqId()
      Part of the identifier for the distant solvent atom. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getNeighborMacromoleculeDistance

      public FloatColumn getNeighborMacromoleculeDistance()
      Distance to closest neighboring macromolecule atom.
      Returns:
      FloatColumn

    • getNeighborLigandDistance

      public FloatColumn getNeighborLigandDistance()
      Distance to closest neighboring ligand or solvent atom.
      Returns:
      FloatColumn