Package org.rcsb.cif.schema.mm

Class PdbxEntityPolyCompLinkList

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxEntityPolyCompLinkList
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxEntityPolyCompLinkList
extends DelegatingCategory
Data items in the PDBX_ENTITY_POLY_COMP_LINK_LIST category enumerate the the linkages between components within the polymer entity.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getLinkId

      public IntColumn getLinkId()
      The value of _pdbx_entity_poly_comp_link_list.link_id uniquely identifies linkages within the branched entity.
      Returns:
      IntColumn

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of this linkage.
      Returns:
      StrColumn

    • getEntityId

      public StrColumn getEntityId()
      The entity id for this branched entity. This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getEntityCompNum1

      public IntColumn getEntityCompNum1()
      The component number for the first component making the linkage. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.
      Returns:
      IntColumn

    • getEntityCompNum2

      public IntColumn getEntityCompNum2()
      The component number for the second component making the linkage. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.
      Returns:
      IntColumn

    • getCompId1

      public StrColumn getCompId1()
      The component identifier for the first component making the linkage. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getCompId2

      public StrColumn getCompId2()
      The component identifier for the second component making the linkage. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.
      Returns:
      StrColumn

    • getAtomId1

      public StrColumn getAtomId1()
      The atom identifier/name for the first atom making the linkage.
      Returns:
      StrColumn

    • getLeavingAtomId1

      public StrColumn getLeavingAtomId1()
      The leaving atom identifier/name bonded to the first atom making the linkage.
      Returns:
      StrColumn

    • getAtomStereoConfig1

      public StrColumn getAtomStereoConfig1()
      The chiral configuration of the first atom making the linkage.
      Returns:
      StrColumn

    • getAtomId2

      public StrColumn getAtomId2()
      The atom identifier/name for the second atom making the linkage.
      Returns:
      StrColumn

    • getLeavingAtomId2

      public StrColumn getLeavingAtomId2()
      The leaving atom identifier/name bonded to the second atom making the linkage.
      Returns:
      StrColumn

    • getAtomStereoConfig2

      public StrColumn getAtomStereoConfig2()
      The chiral configuration of the second atom making the linkage.
      Returns:
      StrColumn

    • getValueOrder

      public StrColumn getValueOrder()
      The bond order target for the chemical linkage.
      Returns:
      StrColumn