Package org.rcsb.cif.schema.mm

Class PdbxNmrSpectralDim

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxNmrSpectralDim
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxNmrSpectralDim
extends DelegatingCategory
Items in the spectral_dim category describe the parameters of each dimension in the NMR experiment used to generate the spectral peak list.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getId

      public IntColumn getId()
      An integer value that specifies the dimension of a multidimensional NMR spectrum.
      Returns:
      IntColumn

    • getAtomType

      public StrColumn getAtomType()
      The value for this tag is a standard IUPAC abbreviation for an element (i.e., H, C, N, P, etc).
      Returns:
      StrColumn

    • getAtomIsotopeNumber

      public IntColumn getAtomIsotopeNumber()
      The mass number for the specified atom.
      Returns:
      IntColumn

    • getSpectralRegion

      public StrColumn getSpectralRegion()
      A code defining the type of nuclei that would be expected to be observed in the spectral region observed in the dimension of the spectrum.
      Returns:
      StrColumn

    • getMagnetizationLinkageId

      public IntColumn getMagnetizationLinkageId()
      The magnetization linkage ID is used to designate dimensions of a multidimensional NMR experiment where the nuclei observed in the dimensions are directly linked by a one bond scalar coupling. For example, the amide proton and amide nitrogen in an 1H-15N HSQC experiment.
      Returns:
      IntColumn

    • getSweepWidth

      public FloatColumn getSweepWidth()
      The width of the spectral window observed in Hz.
      Returns:
      FloatColumn

    • getEncodingCode

      public StrColumn getEncodingCode()
      Code describing how information from one spectral dimension has been encoded in another dimension in for example a reduced dimensionality experiment.
      Returns:
      StrColumn

    • getEncodedSourceDimensionId

      public IntColumn getEncodedSourceDimensionId()
      Pointer to '_pdbx_nmr_spectral_dim.id'. The spectral dimension in a reduced dimensionality experiment that is the source of the magnetization that has been encoded.
      Returns:
      IntColumn

    • getEntryId

      public StrColumn getEntryId()
      Pointer to '_entry.id'
      Returns:
      StrColumn

    • getSpectralPeakListId

      public IntColumn getSpectralPeakListId()
      Pointer to '_pdbx_nmr_spectral_peak_list.id'
      Returns:
      IntColumn

    • getSweepWidthUnits

      public StrColumn getSweepWidthUnits()
      The units for the sweep width value (Hz or ppm)
      Returns:
      StrColumn

    • getCenterFrequencyOffset

      public FloatColumn getCenterFrequencyOffset()
      The center frequency offset for the spectral dimension specified.
      Returns:
      FloatColumn

    • getUnderSamplingType

      public StrColumn getUnderSamplingType()
      The type of spectral folding/aliasing that was used or occurred when the spectrum was collected.
      Returns:
      StrColumn