Package org.rcsb.cif.schema.mm
Class PdbxPhasingMADSet
java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxPhasingMADSet
- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxPhasingMADSet
extends DelegatingCategory
Record details about each phasing set: (Note: the phasing
set is different from data set. for example: if there are
three data sets, the inflection point (IP), the peak (PK)
and the high remote (HR), the combination of the phasing
set will be IP_iso, PK_iso (the isomorphous repleacement
with HR as 'native'), IP_ano, PK_ano and HR_ano (the
anomalous difference with itself). Therefore, there are
five set used for phasing.
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Nested Class Summary
Nested classes/interfaces inherited from class org.rcsb.cif.schema.DelegatingCategory
DelegatingCategory.DelegatingCifCoreCategoryNested classes/interfaces inherited from interface org.rcsb.cif.model.Category
Category.EmptyCategory -
Field Summary
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Constructor Summary
Constructors Constructor Description PdbxPhasingMADSet(Category delegate) -
Method Summary
Modifier and Type Method Description protected ColumncreateDelegate(String columnName, Column column)FloatColumngetDResHigh()_pdbx_phasing_MAD_set.d_res_high records the highest resolution for the phasing set.FloatColumngetDResLow()_pdbx_phasing_MAD_set.d_res_low records the lowerest resolution for phasing set.FloatColumngetFom()_pdbx_phasing_MAD_set.fom records the figure of merit for MAD phasing.FloatColumngetFomAcentric()_pdbx_phasing_MAD_set.fom_acentric records the figure of merit using acentric data for MAD phasing.FloatColumngetFomCentric()_pdbx_phasing_MAD_set.fom_centric records the figure of merit using centric data for MAD phasing.StrColumngetId()_pdbx_phasing_MAD_set.id records phase set name for MAD phasing.FloatColumngetLoc()_pdbx_phasing_MAD_set.loc records lack of closure for MAD phasing.FloatColumngetLocAcentric()_pdbx_phasing_MAD_set.loc_acentric records lack of closure using acentric data for MAD phasing.FloatColumngetLocCentric()_pdbx_phasing_MAD_set.loc_centric records lack of closure using centric data for MAD phasing.IntColumngetNumberOfSites()_pdbx_phasing_MAD_set.number_of_sites records the number of site refined for the phasing set.FloatColumngetPower()_pdbx_phasing_MAD_set.power records phasing power for MAD phasing.FloatColumngetPowerAcentric()_pdbx_phasing_MAD_set.power_acentric records phasing powe using acentric data for MAD phasing.FloatColumngetPowerCentric()_pdbx_phasing_MAD_set.power_centric records phasing powe using centric data for MAD phasing.FloatColumngetRCullis()_pdbx_phasing_MAD_set.R_cullis records R_cullis for MAD phasing.FloatColumngetRCullisAcentric()_pdbx_phasing_MAD_set.R_cullis_acentric records R_cullis using acentric data for MAD phasing.FloatColumngetRCullisCentric()_pdbx_phasing_MAD_set.R_cullis_centric records R_cullis using centric data for MAD phasing.IntColumngetReflns()_pdbx_phasing_MAD_set.reflns records the number of reflections used for MAD phasing.IntColumngetReflnsAcentric()_pdbx_phasing_MAD_set.reflns_acentric records the number of acentric reflections for MAD phasing.IntColumngetReflnsCentric()_pdbx_phasing_MAD_set.reflns_centric records the number of centric reflections for MAD phasing.FloatColumngetRKraut()_pdbx_phasing_MAD_set.R_kraut records R_kraut for MAD phasing.FloatColumngetRKrautAcentric()_pdbx_phasing_MAD_set.r_kraut_acentric records r_kraut using acentric data for MAD phasing.FloatColumngetRKrautCentric()_pdbx_phasing_MAD_set.R_kraut_centric records r_kraut using centric data for MAD phasing.Methods inherited from class org.rcsb.cif.schema.DelegatingCategory
getCategoryName, getColumn, getColumns, getRowCount
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Constructor Details
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Method Details
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createDelegate
- Overrides:
createDelegatein classDelegatingCategory
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getId
_pdbx_phasing_MAD_set.id records phase set name for MAD phasing.- Returns:
- StrColumn
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getDResLow
_pdbx_phasing_MAD_set.d_res_low records the lowerest resolution for phasing set.- Returns:
- FloatColumn
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getDResHigh
_pdbx_phasing_MAD_set.d_res_high records the highest resolution for the phasing set.- Returns:
- FloatColumn
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getNumberOfSites
_pdbx_phasing_MAD_set.number_of_sites records the number of site refined for the phasing set.- Returns:
- IntColumn
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getReflnsAcentric
_pdbx_phasing_MAD_set.reflns_acentric records the number of acentric reflections for MAD phasing.- Returns:
- IntColumn
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getReflnsCentric
_pdbx_phasing_MAD_set.reflns_centric records the number of centric reflections for MAD phasing.- Returns:
- IntColumn
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getReflns
_pdbx_phasing_MAD_set.reflns records the number of reflections used for MAD phasing.- Returns:
- IntColumn
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getFomAcentric
_pdbx_phasing_MAD_set.fom_acentric records the figure of merit using acentric data for MAD phasing.- Returns:
- FloatColumn
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getFomCentric
_pdbx_phasing_MAD_set.fom_centric records the figure of merit using centric data for MAD phasing.- Returns:
- FloatColumn
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getFom
_pdbx_phasing_MAD_set.fom records the figure of merit for MAD phasing.- Returns:
- FloatColumn
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getRCullisCentric
_pdbx_phasing_MAD_set.R_cullis_centric records R_cullis using centric data for MAD phasing.- Returns:
- FloatColumn
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getRCullisAcentric
_pdbx_phasing_MAD_set.R_cullis_acentric records R_cullis using acentric data for MAD phasing.- Returns:
- FloatColumn
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getRCullis
_pdbx_phasing_MAD_set.R_cullis records R_cullis for MAD phasing.- Returns:
- FloatColumn
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getRKrautCentric
_pdbx_phasing_MAD_set.R_kraut_centric records r_kraut using centric data for MAD phasing.- Returns:
- FloatColumn
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getRKrautAcentric
_pdbx_phasing_MAD_set.r_kraut_acentric records r_kraut using acentric data for MAD phasing.- Returns:
- FloatColumn
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getRKraut
_pdbx_phasing_MAD_set.R_kraut records R_kraut for MAD phasing.- Returns:
- FloatColumn
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getLocCentric
_pdbx_phasing_MAD_set.loc_centric records lack of closure using centric data for MAD phasing.- Returns:
- FloatColumn
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getLocAcentric
_pdbx_phasing_MAD_set.loc_acentric records lack of closure using acentric data for MAD phasing.- Returns:
- FloatColumn
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getLoc
_pdbx_phasing_MAD_set.loc records lack of closure for MAD phasing.- Returns:
- FloatColumn
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getPowerCentric
_pdbx_phasing_MAD_set.power_centric records phasing powe using centric data for MAD phasing.- Returns:
- FloatColumn
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getPowerAcentric
_pdbx_phasing_MAD_set.power_acentric records phasing powe using acentric data for MAD phasing.- Returns:
- FloatColumn
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getPower
_pdbx_phasing_MAD_set.power records phasing power for MAD phasing.- Returns:
- FloatColumn
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