Package org.rcsb.cif.schema.mm

Class PdbxReferenceLinkedEntityCompLink

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityCompLink
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxReferenceLinkedEntityCompLink
extends DelegatingCategory
Data items in the pdbx_reference_linked_entity_comp_link category enumerate inter-entity linkages between the components of common observed interaction patterns described in the pdbx_reference_linked_entity category.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getLinkedEntityId

      public IntColumn getLinkedEntityId()
      The value of _pdbx_reference_linked_entity_comp_link.linked_entity_id is a reference _pdbx_reference_linked_entity_comp_list.linked_entity_id in the pdbx_reference_linked_entity_comp_list category.
      Returns:
      IntColumn

    • getLinkId

      public IntColumn getLinkId()
      The value of _pdbx_reference_linked_entity_comp_link.link_id uniquely identifies linkages within the linked entity.
      Returns:
      IntColumn

    • getListId1

      public IntColumn getListId1()
      The value of _pdbx_reference_linked_entity_comp_link.list_id_1 is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.
      Returns:
      IntColumn

    • getListId2

      public IntColumn getListId2()
      The value of _pdbx_reference_linked_entity_comp_link.list_id_2 is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.
      Returns:
      IntColumn

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of a linkage between these constituents in this linked entity.
      Returns:
      StrColumn

    • getCompId1

      public StrColumn getCompId1()
      The component identifier in the first of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getCompId2

      public StrColumn getCompId2()
      The component identifier in the second of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getAtomId1

      public StrColumn getAtomId1()
      The atom identifier/name in the first of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getAtomId2

      public StrColumn getAtomId2()
      The atom identifier/name in the second of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getLeavingAtomId1

      public StrColumn getLeavingAtomId1()
      The leaving atom identifier/name bonded to the first atom making the linkage.
      Returns:
      StrColumn

    • getAtomStereoConfig1

      public StrColumn getAtomStereoConfig1()
      The chiral configuration of the first atom making the linkage.
      Returns:
      StrColumn

    • getLeavingAtomId2

      public StrColumn getLeavingAtomId2()
      The leaving atom identifier/name bonded to the second atom making the linkage.
      Returns:
      StrColumn

    • getAtomStereoConfig2

      public StrColumn getAtomStereoConfig2()
      The chiral configuration of the second atom making the linkage.
      Returns:
      StrColumn

    • getValueOrder

      public StrColumn getValueOrder()
      The bond order target for the chemical linkage.
      Returns:
      StrColumn