Package org.rcsb.cif.schema.mm

Class PdbxReferenceLinkedEntityLink

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxReferenceLinkedEntityLink
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxReferenceLinkedEntityLink
extends DelegatingCategory
Data items in the pdbx_reference_linked_entity_link category enumerate linkages between the entities in common observed interaction patterns described in the pdbx_reference_linked_entity category.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getLinkedEntityId

      public IntColumn getLinkedEntityId()
      The value of _pdbx_reference_linked_entity_link.linked_entity_id is a reference _pdbx_reference_linked_entity_comp_list.linked_entity_id in the pdbx_reference_linked_entity_comp_list category.
      Returns:
      IntColumn

    • getLinkId

      public IntColumn getLinkId()
      The value of _pdbx_reference_linked_entity_link.link_id uniquely identifies linkages within the linked entity.
      Returns:
      IntColumn

    • getFromListId

      public IntColumn getFromListId()
      The value of _pdbx_reference_linked_entity_link.from_list_id is a reference _pdbx_reference_linked_entity_comp_list.list_id in the pdbx_reference_linked_entity_comp_list category.
      Returns:
      IntColumn

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of a linkage between these constituents in this linked entity.
      Returns:
      StrColumn

    • getToCompId

      public StrColumn getToCompId()
      The component identifier in the first of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getFromCompId

      public StrColumn getFromCompId()
      The component identifier in the second of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getToAtomId

      public StrColumn getToAtomId()
      The atom identifier/name in the first of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getFromAtomId

      public StrColumn getFromAtomId()
      The atom identifier/name in the second of the two constituents containing the linkage.
      Returns:
      StrColumn

    • getFromLeavingAtomId

      public StrColumn getFromLeavingAtomId()
      The leaving atom identifier/name bonded to the second atom making the linkage.
      Returns:
      StrColumn

    • getFromAtomStereoConfig

      public StrColumn getFromAtomStereoConfig()
      The chiral configuration of the second atom making the linkage.
      Returns:
      StrColumn

    • getValueOrder

      public StrColumn getValueOrder()
      The bond order target for the chemical linkage.
      Returns:
      StrColumn