Package org.rcsb.cif.schema.mm

Class PdbxReferenceMoleculeRelatedStructures

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxReferenceMoleculeRelatedStructures
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxReferenceMoleculeRelatedStructures
extends DelegatingCategory
Data items in the PDBX_REFERENCE_MOLECULE_RELATED_STRUCTURES category record details of the structural examples in related databases for this entity.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getFamilyPrdId

      public StrColumn getFamilyPrdId()
      The value of _pdbx_reference_molecule_related_structures.family_prd_id is a reference to _pdbx_reference_molecule_list.family_prd_id in category PDBX_REFERENCE_MOLECULE_FAMILY_LIST.
      Returns:
      StrColumn

    • getOrdinal

      public IntColumn getOrdinal()
      The value of _pdbx_reference_molecule_related_structures.ordinal distinguishes related structural data for each entity.
      Returns:
      IntColumn

    • getDbName

      public StrColumn getDbName()
      The database name for the related structure reference.
      Returns:
      StrColumn

    • getDbCode

      public StrColumn getDbCode()
      The database identifier code for the related structure reference.
      Returns:
      StrColumn

    • getDbAccession

      public StrColumn getDbAccession()
      The database accession code for the related structure reference.
      Returns:
      StrColumn

    • getName

      public StrColumn getName()
      The chemical name for the structure entry in the related database
      Returns:
      StrColumn

    • getFormula

      public StrColumn getFormula()
      The formula for the reference entity. Formulae are written according to the rules: 1. Only recognised element symbols may be used. 2. Each element symbol is followed by a 'count' number. A count of '1' may be omitted. 3. A space or parenthesis must separate each element symbol and its count, but in general parentheses are not used. 4. The order of elements depends on whether or not carbon is present. If carbon is present, the order should be: C, then H, then the other elements in alphabetical order of their symbol. If carbon is not present, the elements are listed purely in alphabetic order of their symbol. This is the 'Hill' system used by Chemical Abstracts.
      Returns:
      StrColumn

    • getCitationId

      public StrColumn getCitationId()
      A link to related reference information in the citation category.
      Returns:
      StrColumn