Package org.rcsb.cif.schema.mm

Class PdbxRefineTlsGroup

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxRefineTlsGroup
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxRefineTlsGroup
extends DelegatingCategory
Data items in the PDBX_REFINE_TLS_GROUP category record details about a fragment of a TLS group. Properties of the TLS group are recorded in PDBX_REFINE_TLS

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getId

      public StrColumn getId()
      The value of _pdbx_refine_tls_group.id must uniquely identify a record in the REFINE_TLS_GROUP list for a particular refinement. Note that this item need not be a number; it can be any unique identifier.
      Returns:
      StrColumn

    • getPdbxRefineId

      public StrColumn getPdbxRefineId()
      This data item uniquely identifies a refinement within an entry. _pdbx_refine_tls_group.pdbx_refine_id can be used to distinguish the results of joint refinements.
      Returns:
      StrColumn

    • getRefineTlsId

      public StrColumn getRefineTlsId()
      This data item is a pointer to _pdbx_refine_tls.id in the REFINE_TLS category.
      Returns:
      StrColumn

    • getBegLabelAsymId

      public StrColumn getBegLabelAsymId()
      A component of the identifier for the residue at which the TLS fragment range begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getBegLabelSeqId

      public IntColumn getBegLabelSeqId()
      A component of the identifier for the residue at which the TLS fragment range begins.
      Returns:
      IntColumn

    • getBegAuthAsymId

      public StrColumn getBegAuthAsymId()
      A component of the identifier for the residue at which the TLS fragment range begins. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegAuthSeqId

      public StrColumn getBegAuthSeqId()
      A component of the identifier for the residue at which the TLS fragment range begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegPDBInsCode

      public StrColumn getBegPDBInsCode()
      A component of the identifier for the residue at which the TLS fragment range begins. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndLabelAsymId

      public StrColumn getEndLabelAsymId()
      A component of the identifier for the residue at which the TLS fragment range ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getEndLabelSeqId

      public IntColumn getEndLabelSeqId()
      A component of the identifier for the residue at which the TLS fragment range ends.
      Returns:
      IntColumn

    • getEndAuthAsymId

      public StrColumn getEndAuthAsymId()
      A component of the identifier for the residue at which the TLS fragment range ends. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndAuthSeqId

      public StrColumn getEndAuthSeqId()
      A component of the identifier for the residue at which the TLS fragment range ends. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndPDBInsCode

      public StrColumn getEndPDBInsCode()
      A component of the identifier for the residue at which the TLS fragment range ends. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
      Returns:
      StrColumn

    • getSelection

      public StrColumn getSelection()
      A qualification of the subset of atoms in the specified range included in the TLS fragment.
      Returns:
      StrColumn

    • getSelectionDetails

      public StrColumn getSelectionDetails()
      A text description of subset of atoms included included in the TLS fragment.
      Returns:
      StrColumn