Package org.rcsb.cif.schema.mm

Class PdbxStructRefSeqDifDepositorInfo

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxStructRefSeqDifDepositorInfo
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxStructRefSeqDifDepositorInfo
extends DelegatingCategory
Data items in the PDBX_STRUCT_REF_SEQ_DIF_DEPOSITOR_INFO category capture depositor provided information related to the archival cateogory STRUCT_REF_SEQ_DIF.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getOrdinal

      public IntColumn getOrdinal()
      Ordinal index for this category.
      Returns:
      IntColumn

    • getRefId

      public StrColumn getRefId()
      This data item is a pointer to _struct_ref_seq.ref_id in the STRUCT_REF_SEQ_DEPOSITOR_INFO category.
      Returns:
      StrColumn

    • getEntityId

      public StrColumn getEntityId()
      This data item is a pointer to _entity.id in the ENTITY category.
      Returns:
      StrColumn

    • getDbMonId

      public StrColumn getDbMonId()
      The monomer type found at this position in the referenced database entry. This data item is a pointer to _chem_comp.id in the CHEM_COMP category.
      Returns:
      StrColumn

    • getDbSeqId

      public IntColumn getDbSeqId()
      The monomer position in the referenced database entry.
      Returns:
      IntColumn

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of the point differences between the sequence of the entity or biological unit described in the data block and that in the referenced database entry.
      Returns:
      StrColumn

    • getAuthMonId

      public StrColumn getAuthMonId()
      The monomer type found at this position in the sequence of the entity or biological unit provided by the depositor.
      Returns:
      StrColumn

    • getAuthSeqId

      public IntColumn getAuthSeqId()
      The monomer position in the author provided sequence.
      Returns:
      IntColumn

    • getDbAccession

      public StrColumn getDbAccession()
      Accession code of the reference database.
      Returns:
      StrColumn

    • getDbCode

      public StrColumn getDbCode()
      The code for this entity or biological unit or for a closely related entity or biological unit in the named database.
      Returns:
      StrColumn

    • getDbName

      public StrColumn getDbName()
      The name of the database containing reference information about this entity or biological unit.
      Returns:
      StrColumn

    • getAnnotation

      public StrColumn getAnnotation()
      The description of the sequence difference.
      Returns:
      StrColumn