Package org.rcsb.cif.schema.mm

Class PdbxValidatePlanesAtom

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxValidatePlanesAtom
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxValidatePlanesAtom
extends DelegatingCategory
Data items in the PDBX_VALIDATE_PLANES_ATOM category list the residues that contain unexpected deviations from planes centers.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getPlaneId

      public IntColumn getPlaneId()
      A pointer to _pdbx_validate_planes.id This is an integer serial number.
      Returns:
      IntColumn

    • getId

      public IntColumn getId()
      The value of _pdbx_validate_planes_atom.id must uniquely identify each item in the PDBX_VALIDATE_PLANES_ATOM list. This is an integer serial number.
      Returns:
      IntColumn

    • getPDBModelNum

      public IntColumn getPDBModelNum()
      The model number for an atom site defining the plane This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.
      Returns:
      IntColumn

    • getAuthAsymId

      public StrColumn getAuthAsymId()
      Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAuthCompId

      public StrColumn getAuthCompId()
      Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAuthSeqId

      public StrColumn getAuthSeqId()
      Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getPDBInsCode

      public StrColumn getPDBInsCode()
      Optional identifier of an atom site that defines the plane
      Returns:
      StrColumn

    • getAuthAtomId

      public StrColumn getAuthAtomId()
      Part of the identifier of an atom site that defines the plane This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomDeviation

      public FloatColumn getAtomDeviation()
      The deviation from the plane per atom
      Returns:
      FloatColumn