Package org.rcsb.cif.schema.mm

Class PdbxVirtualAngle

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.PdbxVirtualAngle
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxVirtualAngle
extends DelegatingCategory
Data items in the PDBX_VIRTUAL_ANGLE category record details about the molecular virtual angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getModelId

      public IntColumn getModelId()
      The model number for the given angle
      Returns:
      IntColumn

    • getAtomSiteId1

      public StrColumn getAtomSiteId1()
      The identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAltId1

      public StrColumn getAtomSiteLabelAltId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAtomId1

      public StrColumn getAtomSiteLabelAtomId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelCompId1

      public StrColumn getAtomSiteLabelCompId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelSeqId1

      public IntColumn getAtomSiteLabelSeqId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getAtomSiteLabelAsymId1

      public StrColumn getAtomSiteLabelAsymId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteId2

      public StrColumn getAtomSiteId2()
      The identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. The second atom is taken to be the apex of the angle. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAltId2

      public StrColumn getAtomSiteLabelAltId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAtomId2

      public StrColumn getAtomSiteLabelAtomId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelCompId2

      public StrColumn getAtomSiteLabelCompId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelSeqId2

      public IntColumn getAtomSiteLabelSeqId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getAtomSiteLabelAsymId2

      public StrColumn getAtomSiteLabelAsymId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteId3

      public StrColumn getAtomSiteId3()
      The identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAltId3

      public StrColumn getAtomSiteLabelAltId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelAtomId3

      public StrColumn getAtomSiteLabelAtomId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelCompId3

      public StrColumn getAtomSiteLabelCompId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteLabelSeqId3

      public IntColumn getAtomSiteLabelSeqId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getAtomSiteLabelAsymId3

      public StrColumn getAtomSiteLabelAsymId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAsymId1

      public StrColumn getAtomSiteAuthAsymId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAtomId1

      public StrColumn getAtomSiteAuthAtomId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthCompId1

      public StrColumn getAtomSiteAuthCompId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthSeqId1

      public StrColumn getAtomSiteAuthSeqId1()
      An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAtomId2

      public StrColumn getAtomSiteAuthAtomId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAsymId2

      public StrColumn getAtomSiteAuthAsymId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthCompId2

      public StrColumn getAtomSiteAuthCompId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthSeqId2

      public StrColumn getAtomSiteAuthSeqId2()
      An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAtomId3

      public StrColumn getAtomSiteAuthAtomId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthAsymId3

      public StrColumn getAtomSiteAuthAsymId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthCompId3

      public StrColumn getAtomSiteAuthCompId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getAtomSiteAuthSeqId3

      public StrColumn getAtomSiteAuthSeqId3()
      An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getSiteSymmetry1

      public StrColumn getSiteSymmetry1()
      The symmetry code of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.
      Returns:
      StrColumn

    • getSiteSymmetry2

      public StrColumn getSiteSymmetry2()
      The symmetry code of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.
      Returns:
      StrColumn

    • getSiteSymmetry3

      public StrColumn getSiteSymmetry3()
      The symmetry code of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.
      Returns:
      StrColumn

    • getValue

      public FloatColumn getValue()
      Angle in degrees bounded by the three sites _pdbx_virtual_angle.atom_site_id_1, _pdbx_virtual_angle.atom_site_id_2 and _pdbx_virtual_angle.atom_site_id_3.
      Returns:
      FloatColumn

    • getValueEsd

      public FloatColumn getValueEsd()
      The estimated standard deviation of _pdbx_virtual_angle.value.
      Returns:
      FloatColumn