Package org.rcsb.cif.schema.mm

Class StructAsym

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.StructAsym
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructAsym
extends DelegatingCategory
Data items in the STRUCT_ASYM category record details about the structural elements in the asymmetric unit.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of this portion of the contents of the asymmetric unit.
      Returns:
      StrColumn

    • getEntityId

      public StrColumn getEntityId()
      This data item is a pointer to _entity.id in the ENTITY category.
      Returns:
      StrColumn

    • getId

      public StrColumn getId()
      The value of _struct_asym.id must uniquely identify a record in the STRUCT_ASYM list. Note that this item need not be a number; it can be any unique identifier.
      Returns:
      StrColumn

    • getPdbxModified

      public StrColumn getPdbxModified()
      This data item indicates whether the structural elements are modified.
      Returns:
      StrColumn

    • getPdbxBlankPDBChainidFlag

      public StrColumn getPdbxBlankPDBChainidFlag()
      A flag indicating that this entity was originally labeled with a blank PDB chain id.
      Returns:
      StrColumn

    • getPdbxPDBId

      public StrColumn getPdbxPDBId()
      This data item is a pointer to _atom_site.pdbx_PDB_strand_id the ATOM_SITE category.
      Returns:
      StrColumn

    • getPdbxAltId

      public StrColumn getPdbxAltId()
      This data item is a pointer to _atom_site.ndb_alias_strand_id the ATOM_SITE category.
      Returns:
      StrColumn

    • getPdbxType

      public StrColumn getPdbxType()
      This data item describes the general type of the structural elements in the ATOM_SITE category.
      Returns:
      StrColumn

    • getPdbxOrder

      public IntColumn getPdbxOrder()
      This data item gives the order of the structural elements in the ATOM_SITE category.
      Returns:
      IntColumn

    • getPdbxFractionPerAsymUnit

      public StrColumn getPdbxFractionPerAsymUnit()
      This data item indicates wheather the structural elements exists only as part of its whole molecule in the asymmetric unit.
      Returns:
      StrColumn

    • getPdbxMissingNumBeginOfChainNotInSeqres

      public IntColumn getPdbxMissingNumBeginOfChainNotInSeqres()
      This data item provides the information of how many residues which do not appear in the SEQRES record are missing at the beginning of the strand.
      Returns:
      IntColumn

    • getPdbxMissingNumEndOfChainNotInSeqres

      public IntColumn getPdbxMissingNumEndOfChainNotInSeqres()
      This data item provides the information of how many residues which do not appear in the SEQRES record are missing at the end of the strand.
      Returns:
      IntColumn

    • getPdbxMissingNumBeginOfChainInSeqres

      public IntColumn getPdbxMissingNumBeginOfChainInSeqres()
      This data item provides the information of how many residues which do appear in the SEQRES record are missing at the beginning of the strand.
      Returns:
      IntColumn