Package org.rcsb.cif.schema.mm

Class StructConf

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.StructConf
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructConf
extends DelegatingCategory
Data items in the STRUCT_CONF category record details about the backbone conformation of a segment of polymer. Data items in the STRUCT_CONF_TYPE category define the criteria used to identify the backbone conformations.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getBegLabelAsymId

      public StrColumn getBegLabelAsymId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegLabelCompId

      public StrColumn getBegLabelCompId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegLabelSeqId

      public IntColumn getBegLabelSeqId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getBegAuthAsymId

      public StrColumn getBegAuthAsymId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegAuthCompId

      public StrColumn getBegAuthCompId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getBegAuthSeqId

      public IntColumn getBegAuthSeqId()
      A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getConfTypeId

      public StrColumn getConfTypeId()
      This data item is a pointer to _struct_conf_type.id in the STRUCT_CONF_TYPE category.
      Returns:
      StrColumn

    • getDetails

      public StrColumn getDetails()
      A description of special aspects of the conformation assignment.
      Returns:
      StrColumn

    • getEndLabelAsymId

      public StrColumn getEndLabelAsymId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndLabelCompId

      public StrColumn getEndLabelCompId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndLabelSeqId

      public IntColumn getEndLabelSeqId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getEndAuthAsymId

      public StrColumn getEndAuthAsymId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndAuthCompId

      public StrColumn getEndAuthCompId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getEndAuthSeqId

      public IntColumn getEndAuthSeqId()
      A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      IntColumn

    • getId

      public StrColumn getId()
      The value of _struct_conf.id must uniquely identify a record in the STRUCT_CONF list. Note that this item need not be a number; it can be any unique identifier.
      Returns:
      StrColumn

    • getPdbxBegPDBInsCode

      public StrColumn getPdbxBegPDBInsCode()
      A component of the identifier for the residue at which the conformation segment starts.
      Returns:
      StrColumn

    • getPdbxEndPDBInsCode

      public StrColumn getPdbxEndPDBInsCode()
      A component of the identifier for the residue at which the conformation segment ends.
      Returns:
      StrColumn

    • getPdbxPDBHelixClass

      public StrColumn getPdbxPDBHelixClass()
      This item is a place holder for the helix class used in the PDB HELIX record.
      Returns:
      StrColumn

    • getPdbxPDBHelixLength

      public IntColumn getPdbxPDBHelixLength()
      A placeholder for the lengths of the helix of the PDB HELIX record.
      Returns:
      IntColumn

    • getPdbxPDBHelixId

      public StrColumn getPdbxPDBHelixId()
      A placeholder for the helix identifier of the PDB HELIX record.
      Returns:
      StrColumn