Package org.rcsb.cif.schema.mm

Class StructNcsDomLim

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.StructNcsDomLim
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructNcsDomLim
extends DelegatingCategory
Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getBegLabelAltId

      public StrColumn getBegLabelAltId()
      A component of the identifier for the monomer at which this segment of the domain begins.
      Returns:
      StrColumn

    • getBegLabelAsymId

      public StrColumn getBegLabelAsymId()
      A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getBegLabelCompId

      public StrColumn getBegLabelCompId()
      A component of the identifier for the monomer at which this segment of the domain begins.
      Returns:
      StrColumn

    • getBegLabelSeqId

      public IntColumn getBegLabelSeqId()
      A component of the identifier for the monomer at which this segment of the domain begins.
      Returns:
      IntColumn

    • getBegAuthAsymId

      public StrColumn getBegAuthAsymId()
      A component of the identifier for the monomer at which this segment of the domain begins.
      Returns:
      StrColumn

    • getBegAuthCompId

      public StrColumn getBegAuthCompId()
      A component of the identifier for the monomer at which this segment of the domain begins.
      Returns:
      StrColumn

    • getBegAuthSeqId

      public StrColumn getBegAuthSeqId()
      A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
      Returns:
      StrColumn

    • getDomId

      public StrColumn getDomId()
      This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.
      Returns:
      StrColumn

    • getEndLabelAltId

      public StrColumn getEndLabelAltId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      StrColumn

    • getEndLabelAsymId

      public StrColumn getEndLabelAsymId()
      A component of the identifier for the monomer at which this segment of the domain ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
      Returns:
      StrColumn

    • getEndLabelCompId

      public StrColumn getEndLabelCompId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      StrColumn

    • getEndLabelSeqId

      public IntColumn getEndLabelSeqId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      IntColumn

    • getEndAuthAsymId

      public StrColumn getEndAuthAsymId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      StrColumn

    • getEndAuthCompId

      public StrColumn getEndAuthCompId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      StrColumn

    • getEndAuthSeqId

      public StrColumn getEndAuthSeqId()
      A component of the identifier for the monomer at which this segment of the domain ends.
      Returns:
      StrColumn

    • getSelectionDetails

      public StrColumn getSelectionDetails()
      A text description of the selection of residues that correspond to this domain.
      Returns:
      StrColumn

    • getPdbxComponentId

      public IntColumn getPdbxComponentId()
      Record number of the NCS domain limit assignment.
      Returns:
      IntColumn

    • getPdbxRefineCode

      public FloatColumn getPdbxRefineCode()
      record the refinement code number (from CCP4.)
      Returns:
      FloatColumn

    • getPdbxEnsId

      public StrColumn getPdbxEnsId()
      This is a unique identifier for a collection NCS related domains. This references item '_struct_ncs_dom.pdbx_ens_id'.
      Returns:
      StrColumn