Package org.rcsb.cif.schema.mm

Class StructSheetTopology

java.lang.Object
org.rcsb.cif.schema.DelegatingCategory
org.rcsb.cif.schema.mm.StructSheetTopology
All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructSheetTopology
extends DelegatingCategory
Data items in the STRUCT_SHEET_TOPOLOGY category record details about the topology of the residue ranges that form a beta-sheet. All topology links are pairwise and the specified pairs are assumed to be successive in the amino-acid sequence. These data items are useful in describing various simple and complex folds, but they become inadequate when the strands in the sheet come from more than one chain. The STRUCT_SHEET_ORDER data items can be used to describe single- and multiple-chain-containing sheets.

  • Constructor Details

  • Method Details

    • createDelegate

      protected Column createDelegate​(String columnName, Column column)
      Overrides:
      createDelegate in class DelegatingCategory

    • getOffset

      public IntColumn getOffset()
      Designates the relative position in the sheet, plus or minus, of the second residue range to the first.
      Returns:
      IntColumn

    • getRangeId1

      public StrColumn getRangeId1()
      This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.
      Returns:
      StrColumn

    • getRangeId2

      public StrColumn getRangeId2()
      This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.
      Returns:
      StrColumn

    • getSense

      public StrColumn getSense()
      A flag to indicate whether the two designated residue ranges are parallel or antiparallel to one another.
      Returns:
      StrColumn

    • getSheetId

      public StrColumn getSheetId()
      This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.
      Returns:
      StrColumn